View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_426 (Length: 224)
Name: NF10261A_low_426
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_426 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 40869525 - 40869748
Alignment:
| Q |
1 |
gaaaaagagttgataaaattaattatcactcattgattttatgctagattagacacttatttatacgagacactgagcaactcattcttcaaatggacca |
100 |
Q |
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||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40869525 |
gaaaaagagttgataaaatgaattatcactcgttgattttatgctagattagacacttatttatacgagacactgagcaactcattcttcaaatggacca |
40869624 |
T |
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| Q |
101 |
attatccttcataagtagatccagaacttagggggaaccaatctggactatctgcagcaccaactggatccttttgtttcttcacatccttagaaattaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40869625 |
attatccttcataagtagatccagaacttagggggaaccaatctggactatctgcagcaccaactggatccttttgtttcttcacatccttagaaattaa |
40869724 |
T |
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| Q |
201 |
ccatcattccatctccatcctaca |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
40869725 |
ccatcattccatctccatcctaca |
40869748 |
T |
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