View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_440 (Length: 221)
Name: NF10261A_low_440
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_440 |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 30841619 - 30841800
Alignment:
| Q |
20 |
tggatcatcctcattagactaagagcgatcatacaagtgaattgtacaccccatctttactcaaaatcgtaaccttcacttttaaaacaatgtaaaactt |
119 |
Q |
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| T |
30841619 |
tggatcatccacattggactcagagcgatcatacaagtgaattgtacaccccatctttactcaaaatcgtaacctccactttttaaacaatgtaaaactt |
30841718 |
T |
|
| Q |
120 |
ctacctcatatttgctaaacaacattaattatnnnnnnntgtggttggtccatttctttatttcctcgtactaggggttatt |
201 |
Q |
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| T |
30841719 |
ctacctcatatttgctaaacaacattaattataaaaaaatgtggttggtccatttctttatttcctcgtactagcggttatt |
30841800 |
T |
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