View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_443 (Length: 220)
Name: NF10261A_low_443
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_443 |
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Alignment Details
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 38224709 - 38224915
Alignment:
| Q |
11 |
aataatatcaagactaaaggaaacaatacctggaccttagaatatggtaaattgttacacctctgaagtatgaatttgttctggctagcaaaattctatt |
110 |
Q |
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| T |
38224709 |
aataatatcaagactaaaggaaacaatacctggaccttagactatggtaaattgttccacctctgaagtatgaatttgttctggctagcaaaattctatt |
38224808 |
T |
|
| Q |
111 |
tatagttatatacgtgtgtataaatttgagggaggacccaccactaaaccgaaagtgggatctgacacaatttctgaggtgttcagcatccattattttt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38224809 |
tatagttatatacgtgtgtataaatttgagggaggacccaccactaaaccgaaagtgggatctgacacaatttctgaggtgttcagcatccattattttt |
38224908 |
T |
|
| Q |
211 |
caattgc |
217 |
Q |
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||||||| |
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| T |
38224909 |
caattgc |
38224915 |
T |
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