View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_444 (Length: 220)
Name: NF10261A_low_444
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_444 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 8293626 - 8293845
Alignment:
| Q |
1 |
taatttctctgattccagatattttgttgctgcgttttgtatagcgtccgtgtcatgtgcatttgatctccatataattaattgcatctctggtttaggt |
100 |
Q |
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| T |
8293626 |
taatttctctgattccagatattttgttgctgcgttttgtatagcgtccgtgtcatgtgcatttgatctccatataattaattgcatctctggtttaggt |
8293725 |
T |
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| Q |
101 |
gctannnnnnnaataacaaatgtagaatattagtatgttaatagttaggttagtattgttttctctcgtgacgattaaattgattatcagtttctgcaat |
200 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8293726 |
gctatttttttaataacaaatgtagaatattagtatgttaatagttaggttagtattgttttctctcgtgacgattaaattgattatcagtttctgcaat |
8293825 |
T |
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| Q |
201 |
gtacacgtttctgttgtttt |
220 |
Q |
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|||||||||||||||||||| |
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| T |
8293826 |
gtacacgtttctgttgtttt |
8293845 |
T |
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