View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_445 (Length: 219)
Name: NF10261A_low_445
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_445 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 10566857 - 10567054
Alignment:
| Q |
16 |
tggacatcactacaaatttactttggtccttttgccaagaggatgttactgagggtccagaacaactatataactcagagatagcactatattgactttc |
115 |
Q |
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| T |
10566857 |
tggacatcactacaaatttactttggtccttttgccaagaggatgttactgagggtccagaacaactatataactcagagatagcactatattgactttc |
10566956 |
T |
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| Q |
116 |
aaactcaccacggtctggaatagatctaatcgtcttcatgaactctaaataatcagtccccatacatggaacctccgagttgatgtccatctcattga |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |
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| T |
10566957 |
aaactcaccacggtctggaatagatctaatcgtcttcatgaactctaaataatcagtccccatacatggaacctccgagttgttttccttctcattga |
10567054 |
T |
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