View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_463 (Length: 213)
Name: NF10261A_low_463
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_463 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 28183193 - 28182981
Alignment:
| Q |
1 |
gagtaaatgaacaaatctgaattgaaagttgatatttcatatttcaacataaccataggtttgtatgtacacatgtcatataaaccattagatatgctat |
100 |
Q |
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| T |
28183193 |
gagtaaatgaacaaatctgaattgaaagttgatatttcatatttcaacataaccatagatttgtatgtacacatgtcatataaaccattagatatgctat |
28183094 |
T |
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| Q |
101 |
tttatcctacaaaatgaactactatttattttagataagcttaatttataacaaagaaattatgtacataatgagttcccttcacatcttacagtagact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
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| T |
28183093 |
tttatcctacaaaatgaactactatttattttagataagcttaatttataacaaagaaattatgtacataatgagttcccttcacttcttacagcagact |
28182994 |
T |
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| Q |
201 |
agtctcatacaca |
213 |
Q |
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||||||||||||| |
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| T |
28182993 |
agtctcatacaca |
28182981 |
T |
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