View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_465 (Length: 212)
Name: NF10261A_low_465
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_465 |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 2896811 - 2896984
Alignment:
| Q |
20 |
aagatcccattaaaagggcctctctgatcttaaatattggttcagtcaaattagtgcaatagggaaaataaaactcaaccttattttaccatcgacacaa |
119 |
Q |
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| T |
2896811 |
aagatcccattaaaagggcctctctgatcttaaatattagttcagtcaaattagtgcaatagggaaaataaaactcaaccttattttaccatcgacacaa |
2896910 |
T |
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| Q |
120 |
ccagaatcgaatcaatcagccaaacacactacacgatttgatacaaatagtccttctctacataatataatatt |
193 |
Q |
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| T |
2896911 |
ccagaatccaatcaatcagccaaacacactacacgatttgatacaaatagtccttctctacataatataatatt |
2896984 |
T |
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