View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_66 (Length: 371)
Name: NF10261A_low_66
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_66 |
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Alignment Details
Target: chr8 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 10 - 365
Target Start/End: Original strand, 32278660 - 32279021
Alignment:
| Q |
10 |
attcactcacaattatgcaagagaactctgcattctatttgtataaacaaacaagtcaataactatgatagtataggcaacaagaatagaatagctttgg |
109 |
Q |
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| T |
32278660 |
attcactcacaattatgcaagagaactctgcattctatttgtataaacaaacaagtcaataactatgatagtataggcaacaagaatagaatagctttgg |
32278759 |
T |
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| Q |
110 |
tcatactcatgtcaaaataaggacatgtctgatgtacgtaaatttggaagcaaaacggcatatatgcctctaaaattccagtatgtatactcatacaaaa |
209 |
Q |
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| T |
32278760 |
tcatactcatgtcaaaataaggacatgtctgacgtacgtaaatttggaagcaaaacggcatatatgcctctaaaattccagtatgtatactcatacaaaa |
32278859 |
T |
|
| Q |
210 |
atgtatacaacaaagaaaacaaatcctgattcaac------gcataacattatgtaaacttgcgctacaaaaactagtcttctgctaaaaacccagtatt |
303 |
Q |
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||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32278860 |
atgtatacagcaaaaaaaacaaatcctgattcaacaaaaaagcataacattatgtaaacttgcgctacaaaaactagtcttctgctaaaaacccagtatt |
32278959 |
T |
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| Q |
304 |
cagattgagatacatagctttagccttcatataagatatgtcgatgaaacccataataaaac |
365 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32278960 |
cagattgagatacatagctttagccttcatataagatatgtcgatgaaacccataataaaac |
32279021 |
T |
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