View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10261A_low_76 (Length: 357)

Name: NF10261A_low_76
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10261A_low_76
NF10261A_low_76
[»] chr3 (60 HSPs)
chr3 (17-301)||(16816145-16816428)
chr3 (17-301)||(17933495-17933780)
chr3 (17-351)||(14538494-14538830)
chr3 (29-313)||(41006408-41006693)
chr3 (29-313)||(41015188-41015473)
chr3 (42-318)||(9525357-9525634)
chr3 (17-278)||(8197659-8197918)
chr3 (184-355)||(50824360-50824535)
chr3 (184-355)||(50851325-50851500)
chr3 (176-355)||(27341220-27341401)
chr3 (177-355)||(2211239-2211418)
chr3 (176-313)||(8154572-8154710)
chr3 (184-318)||(9555031-9555165)
chr3 (58-198)||(4454302-4454442)
chr3 (58-198)||(18888291-18888431)
chr3 (58-198)||(18902692-18902832)
chr3 (75-203)||(6958978-6959104)
chr3 (184-355)||(28470103-28470274)
chr3 (184-302)||(43470492-43470609)
chr3 (75-193)||(13553261-13553376)
chr3 (175-301)||(17919197-17919324)
chr3 (184-240)||(17628273-17628329)
chr3 (78-194)||(11921033-11921149)
chr3 (78-194)||(22964244-22964360)
chr3 (78-194)||(7084796-7084914)
chr3 (184-278)||(18349564-18349658)
chr3 (184-302)||(21186755-21186872)
chr3 (78-194)||(6575799-6575915)
chr3 (95-198)||(25271701-25271804)
chr3 (95-198)||(10714878-10714981)
chr3 (96-193)||(15626966-15627060)
chr3 (184-270)||(18039019-18039105)
chr3 (156-197)||(15709167-15709208)
chr3 (184-272)||(30445-30533)
chr3 (141-193)||(74203-74254)
chr3 (141-193)||(4313644-4313695)
chr3 (141-193)||(8612587-8612638)
chr3 (141-193)||(13105688-13105739)
chr3 (142-193)||(3683835-3683885)
chr3 (142-193)||(20447651-20447701)
chr3 (96-186)||(3238924-3239012)
chr3 (156-197)||(6201546-6201588)
chr3 (156-197)||(8812582-8812624)
chr3 (156-197)||(15529086-15529128)
chr3 (151-193)||(15923293-15923335)
chr3 (156-197)||(37256139-37256181)
chr3 (156-197)||(46385278-46385320)
chr3 (156-193)||(5946009-5946046)
chr3 (156-193)||(8623664-8623701)
chr3 (246-299)||(13272670-13272723)
chr3 (156-193)||(14881364-14881401)
chr3 (156-193)||(46393413-46393450)
chr3 (156-197)||(21616059-21616101)
chr3 (246-299)||(4505979-4506032)
chr3 (78-186)||(15677575-15677684)
chr3 (261-302)||(16288692-16288733)
chr3 (246-299)||(17657630-17657683)
chr3 (246-299)||(27976552-27976605)
chr3 (245-301)||(1477758-1477814)
chr3 (255-299)||(17618130-17618174)
[»] chr4 (32 HSPs)
chr4 (17-355)||(12996319-12996655)
chr4 (29-313)||(8094210-8094496)
chr4 (176-355)||(52295603-52295784)
chr4 (184-355)||(27343577-27343748)
chr4 (17-270)||(33188623-33188859)
chr4 (184-313)||(8103016-8103145)
chr4 (184-313)||(4523608-4523737)
chr4 (184-355)||(21532190-21532361)
chr4 (66-198)||(1877756-1877889)
chr4 (184-249)||(10638336-10638400)
chr4 (184-301)||(12428418-12428535)
chr4 (75-197)||(22142125-22142244)
chr4 (95-194)||(14721323-14721423)
chr4 (95-198)||(26213146-26213250)
chr4 (274-355)||(10638404-10638485)
chr4 (95-186)||(19771903-19771994)
chr4 (141-193)||(3366017-3366068)
chr4 (141-193)||(3382494-3382545)
chr4 (141-193)||(9190521-9190572)
chr4 (184-301)||(3424339-3424454)
chr4 (151-193)||(12614207-12614249)
chr4 (151-193)||(12614287-12614329)
chr4 (151-193)||(16360146-16360188)
chr4 (151-193)||(16720825-16720867)
chr4 (156-197)||(22712404-22712446)
chr4 (235-280)||(12402911-12402956)
chr4 (227-299)||(19772241-19772313)
chr4 (158-193)||(55788768-55788803)
chr4 (151-193)||(15880094-15880136)
chr4 (246-299)||(19647352-19647405)
chr4 (295-355)||(10814333-10814393)
chr4 (141-193)||(20554970-20555021)
[»] scaffold0016 (1 HSPs)
scaffold0016 (29-355)||(23315-23644)
[»] chr5 (62 HSPs)
chr5 (29-355)||(20372799-20373127)
chr5 (29-313)||(24956774-24957059)
chr5 (29-313)||(28852402-28852687)
chr5 (184-355)||(29186164-29186335)
chr5 (184-355)||(20398521-20398692)
chr5 (176-349)||(23349968-23350142)
chr5 (176-313)||(24965237-24965375)
chr5 (184-313)||(43597974-43598103)
chr5 (184-313)||(43603466-43603595)
chr5 (184-313)||(43608958-43609087)
chr5 (184-355)||(31410898-31411069)
chr5 (176-313)||(1728087-1728225)
chr5 (184-313)||(28843948-28844077)
chr5 (177-303)||(31421789-31421916)
chr5 (75-193)||(347580-347695)
chr5 (184-287)||(19223563-19223666)
chr5 (95-186)||(23037561-23037652)
chr5 (66-198)||(20384227-20384361)
chr5 (78-198)||(23634744-23634866)
chr5 (78-198)||(23829285-23829407)
chr5 (78-194)||(3479568-3479684)
chr5 (95-198)||(21988880-21988984)
chr5 (78-194)||(27225934-27226050)
chr5 (95-186)||(21852899-21852990)
chr5 (95-198)||(33838007-33838110)
chr5 (141-193)||(29901194-29901245)
chr5 (141-193)||(36454592-36454643)
chr5 (156-198)||(5435768-5435811)
chr5 (148-198)||(11805140-11805191)
chr5 (148-198)||(12172915-12172966)
chr5 (142-193)||(24062685-24062735)
chr5 (148-198)||(26081135-26081186)
chr5 (156-197)||(7794267-7794309)
chr5 (156-197)||(11939658-11939700)
chr5 (156-197)||(12387296-12387338)
chr5 (156-197)||(15779788-15779830)
chr5 (156-197)||(17961853-17961895)
chr5 (255-301)||(23028007-23028053)
chr5 (254-300)||(23037923-23037969)
chr5 (151-193)||(23577489-23577531)
chr5 (151-193)||(26869298-26869340)
chr5 (156-197)||(31525309-31525351)
chr5 (151-193)||(34473508-34473550)
chr5 (156-197)||(36371333-36371375)
chr5 (156-197)||(36995996-36996038)
chr5 (156-193)||(1805219-1805256)
chr5 (156-193)||(7255118-7255155)
chr5 (156-193)||(21696051-21696088)
chr5 (141-197)||(25532833-25532889)
chr5 (156-193)||(37584913-37584950)
chr5 (141-193)||(20092802-20092853)
chr5 (141-193)||(20639912-20639963)
chr5 (184-272)||(41099745-41099833)
chr5 (246-299)||(21988620-21988673)
chr5 (246-299)||(21997264-21997317)
chr5 (246-299)||(23606368-23606421)
chr5 (246-299)||(23635076-23635129)
chr5 (246-299)||(23829022-23829075)
chr5 (246-299)||(23837763-23837816)
chr5 (246-299)||(31550458-31550511)
chr5 (246-302)||(21852579-21852635)
chr5 (246-302)||(21869103-21869159)
[»] chr6 (45 HSPs)
chr6 (29-355)||(5994548-5994879)
chr6 (184-355)||(25991858-25992029)
chr6 (184-355)||(23925343-23925514)
chr6 (176-355)||(33298084-33298263)
chr6 (184-313)||(25550303-25550432)
chr6 (184-318)||(13825711-13825845)
chr6 (184-313)||(5004069-5004198)
chr6 (184-313)||(30824457-30824586)
chr6 (184-313)||(25506469-25506598)
chr6 (184-307)||(35091610-35091733)
chr6 (184-313)||(11279845-11279974)
chr6 (176-305)||(15391547-15391677)
chr6 (66-198)||(27549530-27549662)
chr6 (29-195)||(25711608-25711773)
chr6 (78-194)||(18207829-18207945)
chr6 (78-194)||(28310800-28310916)
chr6 (95-186)||(16642031-16642122)
chr6 (176-280)||(13490192-13490297)
chr6 (184-228)||(5489132-5489176)
chr6 (95-186)||(16586721-16586811)
chr6 (95-186)||(16608569-16608659)
chr6 (95-198)||(18123948-18124051)
chr6 (235-303)||(26526640-26526708)
chr6 (95-186)||(21361254-21361345)
chr6 (95-186)||(23965236-23965327)
chr6 (282-355)||(5489051-5489124)
chr6 (141-193)||(12391022-12391073)
chr6 (141-193)||(19719801-19719852)
chr6 (75-193)||(20051024-20051140)
chr6 (141-193)||(22067354-22067405)
chr6 (141-193)||(22764930-22764981)
chr6 (148-198)||(27049905-27049956)
chr6 (151-197)||(27517284-27517331)
chr6 (156-197)||(615963-616005)
chr6 (151-193)||(1549177-1549219)
chr6 (156-197)||(9131749-9131791)
chr6 (156-197)||(16816901-16816943)
chr6 (151-193)||(20452707-20452749)
chr6 (156-193)||(20040983-20041020)
chr6 (156-193)||(24143615-24143652)
chr6 (141-186)||(26981764-26981808)
chr6 (175-233)||(11053700-11053760)
chr6 (246-299)||(15140726-15140779)
chr6 (246-299)||(23985047-23985100)
chr6 (246-299)||(28127457-28127510)
[»] chr2 (44 HSPs)
chr2 (29-313)||(15944485-15944770)
chr2 (29-313)||(35146781-35147066)
chr2 (29-313)||(42565857-42566142)
chr2 (29-313)||(20621373-20621655)
chr2 (17-278)||(24292215-24292475)
chr2 (204-355)||(35037884-35038035)
chr2 (175-313)||(35138591-35138730)
chr2 (175-313)||(41233772-41233911)
chr2 (184-313)||(14582933-14583062)
chr2 (184-313)||(15953000-15953129)
chr2 (177-313)||(38168285-38168422)
chr2 (184-313)||(42574481-42574610)
chr2 (184-278)||(17687361-17687455)
chr2 (184-304)||(20372251-20372370)
chr2 (184-287)||(25483609-25483712)
chr2 (184-287)||(25491215-25491318)
chr2 (184-271)||(44372713-44372800)
chr2 (184-271)||(44388624-44388711)
chr2 (66-198)||(26719749-26719881)
chr2 (58-198)||(34529980-34530120)
chr2 (66-194)||(21852790-21852919)
chr2 (78-194)||(34705462-34705578)
chr2 (184-301)||(35303745-35303862)
chr2 (78-194)||(42398249-42398365)
chr2 (95-198)||(16281274-16281378)
chr2 (177-280)||(27606606-27606709)
chr2 (75-193)||(45489379-45489495)
chr2 (184-278)||(24285704-24285798)
chr2 (179-278)||(26903296-26903396)
chr2 (184-278)||(42249418-42249512)
chr2 (141-193)||(5871160-5871211)
chr2 (141-193)||(17879295-17879346)
chr2 (148-198)||(3757706-3757757)
chr2 (156-197)||(12388360-12388402)
chr2 (184-278)||(34070567-34070661)
chr2 (156-193)||(18973177-18973214)
chr2 (225-302)||(18989312-18989389)
chr2 (156-193)||(21755878-21755915)
chr2 (158-198)||(22954061-22954102)
chr2 (75-193)||(19800700-19800816)
chr2 (141-193)||(21751321-21751372)
chr2 (158-193)||(21064667-21064702)
chr2 (151-193)||(40387070-40387112)
chr2 (246-299)||(27683381-27683434)
[»] chr1 (25 HSPs)
chr1 (29-313)||(31548375-31548660)
chr1 (17-301)||(29221429-29221711)
chr1 (29-313)||(3432818-3433105)
chr1 (184-355)||(32137640-32137811)
chr1 (184-347)||(41746586-41746750)
chr1 (184-313)||(31539962-31540091)
chr1 (184-313)||(35103992-35104121)
chr1 (58-193)||(28993567-28993701)
chr1 (17-86)||(2391560-2391628)
chr1 (184-301)||(44320132-44320249)
chr1 (75-193)||(6197902-6198018)
chr1 (184-278)||(21498861-21498955)
chr1 (252-301)||(8241438-8241487)
chr1 (141-193)||(1961603-1961654)
chr1 (141-193)||(2336106-2336157)
chr1 (295-355)||(13450142-13450202)
chr1 (141-193)||(19367440-19367491)
chr1 (184-293)||(28457562-28457673)
chr1 (148-198)||(31560078-31560129)
chr1 (156-197)||(5624246-5624288)
chr1 (151-193)||(27168675-27168717)
chr1 (184-270)||(51058359-51058444)
chr1 (227-299)||(8579341-8579413)
chr1 (158-193)||(14813628-14813663)
chr1 (246-299)||(12465698-12465751)
[»] chr8 (26 HSPs)
chr8 (29-313)||(39837490-39837775)
chr8 (29-313)||(17664568-17664852)
chr8 (29-354)||(26873490-26873817)
chr8 (184-318)||(17973573-17973707)
chr8 (177-313)||(25579740-25579877)
chr8 (184-313)||(30938290-30938419)
chr8 (184-354)||(26875940-26876111)
chr8 (184-305)||(39845541-39845662)
chr8 (75-233)||(6670612-6670768)
chr8 (184-313)||(1407001-1407130)
chr8 (184-308)||(4839715-4839839)
chr8 (184-313)||(17683724-17683853)
chr8 (66-198)||(16773097-16773230)
chr8 (58-197)||(25795454-25795592)
chr8 (78-194)||(14216609-14216725)
chr8 (91-186)||(19848648-19848743)
chr8 (156-197)||(39631568-39631610)
chr8 (156-193)||(22157027-22157064)
chr8 (141-197)||(16066196-16066251)
chr8 (141-185)||(25853087-25853130)
chr8 (141-193)||(32006699-32006750)
chr8 (187-278)||(4582215-4582306)
chr8 (151-197)||(21589652-21589699)
chr8 (151-193)||(20733134-20733176)
chr8 (246-302)||(23090611-23090667)
chr8 (246-302)||(25700273-25700329)
[»] chr7 (47 HSPs)
chr7 (29-313)||(13839383-13839668)
chr7 (29-233)||(4941585-4941789)
chr7 (175-355)||(10439935-10440116)
chr7 (184-307)||(18304326-18304449)
chr7 (174-313)||(4952325-4952465)
chr7 (176-313)||(13831499-13831637)
chr7 (184-313)||(12978463-12978592)
chr7 (66-198)||(1888933-1889065)
chr7 (177-272)||(30244775-30244871)
chr7 (78-186)||(38410625-38410733)
chr7 (177-280)||(30255413-30255516)
chr7 (95-194)||(17599614-17599713)
chr7 (78-194)||(2561210-2561326)
chr7 (78-194)||(15197550-15197666)
chr7 (78-186)||(27442002-27442111)
chr7 (177-280)||(30245568-30245672)
chr7 (78-194)||(29029257-29029375)
chr7 (78-194)||(29094051-29094167)
chr7 (176-301)||(21662962-21663089)
chr7 (78-198)||(16123362-16123482)
chr7 (138-193)||(12593412-12593466)
chr7 (95-186)||(16241967-16242058)
chr7 (120-186)||(1955797-1955863)
chr7 (141-193)||(852868-852919)
chr7 (141-193)||(1210872-1210923)
chr7 (141-193)||(16265903-16265954)
chr7 (141-193)||(34363190-34363241)
chr7 (148-198)||(561129-561180)
chr7 (142-193)||(3424720-3424770)
chr7 (148-198)||(5201750-5201801)
chr7 (148-198)||(27968586-27968637)
chr7 (156-197)||(8817858-8817900)
chr7 (156-197)||(9474214-9474256)
chr7 (151-193)||(15767156-15767198)
chr7 (151-193)||(16282636-16282678)
chr7 (156-197)||(16388579-16388621)
chr7 (151-193)||(22085519-22085561)
chr7 (156-197)||(23878739-23878781)
chr7 (156-197)||(30365058-30365100)
chr7 (151-193)||(34132871-34132913)
chr7 (156-193)||(845501-845538)
chr7 (156-193)||(42631308-42631345)
chr7 (142-197)||(794104-794159)
chr7 (247-302)||(1955691-1955746)
chr7 (156-186)||(18157352-18157382)
chr7 (246-299)||(20114066-20114119)
chr7 (246-299)||(38247996-38248049)
[»] scaffold0156 (2 HSPs)
scaffold0156 (184-355)||(35242-35413)
scaffold0156 (66-171)||(28536-28642)
[»] scaffold0389 (1 HSPs)
scaffold0389 (17-278)||(258-518)
[»] scaffold0002 (1 HSPs)
scaffold0002 (184-313)||(121236-121365)
[»] scaffold0497 (1 HSPs)
scaffold0497 (184-355)||(11001-11171)
[»] scaffold0632 (1 HSPs)
scaffold0632 (184-355)||(4398-4570)
[»] scaffold0111 (1 HSPs)
scaffold0111 (184-349)||(33043-33208)
[»] scaffold0173 (1 HSPs)
scaffold0173 (176-355)||(815-995)
[»] scaffold0044 (3 HSPs)
scaffold0044 (66-278)||(65501-65714)
scaffold0044 (175-278)||(81749-81853)
scaffold0044 (17-54)||(67729-67766)
[»] scaffold0083 (1 HSPs)
scaffold0083 (184-304)||(15821-15941)
[»] scaffold0023 (1 HSPs)
scaffold0023 (42-193)||(137839-137988)
[»] scaffold0514 (1 HSPs)
scaffold0514 (75-233)||(10916-11072)
[»] scaffold0209 (1 HSPs)
scaffold0209 (184-313)||(12-141)
[»] scaffold0039 (1 HSPs)
scaffold0039 (184-267)||(40807-40890)
[»] scaffold0170 (1 HSPs)
scaffold0170 (177-302)||(7129-7255)
[»] scaffold0545 (1 HSPs)
scaffold0545 (58-198)||(10035-10175)
[»] scaffold0431 (1 HSPs)
scaffold0431 (184-301)||(147-264)
[»] scaffold0222 (1 HSPs)
scaffold0222 (184-301)||(20422-20539)
[»] scaffold0404 (1 HSPs)
scaffold0404 (78-194)||(15044-15160)
[»] scaffold0144 (1 HSPs)
scaffold0144 (95-186)||(10539-10630)
[»] scaffold0046 (1 HSPs)
scaffold0046 (78-186)||(61158-61268)
[»] scaffold0863 (1 HSPs)
scaffold0863 (176-278)||(335-438)
[»] scaffold0991 (1 HSPs)
scaffold0991 (184-269)||(345-430)
[»] scaffold0435 (1 HSPs)
scaffold0435 (75-193)||(8422-8538)
[»] scaffold1380 (1 HSPs)
scaffold1380 (95-197)||(238-341)
[»] scaffold0047 (2 HSPs)
scaffold0047 (95-186)||(80815-80906)
scaffold0047 (246-299)||(59736-59789)
[»] scaffold1487 (1 HSPs)
scaffold1487 (184-222)||(762-800)
[»] scaffold0048 (2 HSPs)
scaffold0048 (184-222)||(7648-7686)
scaffold0048 (275-349)||(7547-7621)
[»] scaffold0290 (1 HSPs)
scaffold0290 (225-302)||(15760-15837)
[»] scaffold0815 (1 HSPs)
scaffold0815 (75-193)||(5090-5206)
[»] scaffold0027 (1 HSPs)
scaffold0027 (244-355)||(65589-65701)
[»] scaffold0015 (1 HSPs)
scaffold0015 (176-270)||(192527-192622)
[»] scaffold2005 (1 HSPs)
scaffold2005 (156-197)||(1126-1168)
[»] scaffold1721 (1 HSPs)
scaffold1721 (151-193)||(799-841)
[»] scaffold0755 (1 HSPs)
scaffold0755 (156-197)||(942-984)
[»] scaffold0503 (2 HSPs)
scaffold0503 (151-193)||(1966-2008)
scaffold0503 (151-193)||(6533-6575)
[»] scaffold0378 (1 HSPs)
scaffold0378 (151-193)||(744-786)
[»] scaffold0094 (1 HSPs)
scaffold0094 (151-193)||(30749-30791)
[»] scaffold0029 (1 HSPs)
scaffold0029 (156-197)||(33932-33974)
[»] scaffold0014 (1 HSPs)
scaffold0014 (151-193)||(3740-3782)
[»] scaffold0721 (1 HSPs)
scaffold0721 (156-193)||(2942-2979)
[»] scaffold0582 (1 HSPs)
scaffold0582 (141-197)||(414-470)
[»] scaffold0357 (1 HSPs)
scaffold0357 (156-193)||(12922-12959)
[»] scaffold0278 (2 HSPs)
scaffold0278 (156-193)||(16093-16130)
scaffold0278 (156-193)||(19427-19464)
[»] scaffold0068 (1 HSPs)
scaffold0068 (156-193)||(17822-17859)
[»] scaffold0361 (1 HSPs)
scaffold0361 (141-193)||(483-534)
[»] scaffold0315 (2 HSPs)
scaffold0315 (246-302)||(10595-10651)
scaffold0315 (156-185)||(10702-10731)
[»] scaffold1068 (1 HSPs)
scaffold1068 (95-186)||(2918-3009)
[»] scaffold0799 (1 HSPs)
scaffold0799 (158-193)||(1979-2014)
[»] scaffold0243 (1 HSPs)
scaffold0243 (95-193)||(20713-20808)
[»] scaffold0005 (1 HSPs)
scaffold0005 (158-193)||(304466-304501)
[»] scaffold0605 (1 HSPs)
scaffold0605 (151-193)||(9387-9429)
[»] scaffold0455 (1 HSPs)
scaffold0455 (246-299)||(6056-6109)
[»] scaffold0009 (1 HSPs)
scaffold0009 (156-193)||(163406-163443)
[»] scaffold0323 (1 HSPs)
scaffold0323 (299-355)||(17613-17669)


Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 301
Target Start/End: Complemental strand, 16816428 - 16816145
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgaccca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16816428 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgaccca 16816329  T
Q  117 ttgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaattttgaccacttttctctattcttacc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  16816328 ttgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaattttgaccacttttctctatttttact 16816229  T
Q  217 cattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattt 301  Q
    ||||||||||||||||| |||| ||| ||||||| |  ||||||||||||||| |   |||||| |||||||||||| |||||||    
T  16816228 cattttattcgtatttttaaagccggaaattttcgttatttcagacgaaattttgacggagagg-tactttgaagtacctcattt 16816145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 301
Target Start/End: Original strand, 17933495 - 17933780
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgaccca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||     
T  17933495 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtacttaatatttaagtctcttccacccg 17933594  T
Q  117 ttgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgaccacttttctctattcttac 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  17933595 ttgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccaattttctctatttttac 17933694  T
Q  216 ccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattt 301  Q
    |||||||||||||||||| |||||||| ||||||| |  ||||||||||||||||    |||||| |||||||||||| |||||||    
T  17933695 ccattttattcgtatttttaaagtcggaaattttcgttatttcagacgaaatttcttcggagaggttactttgaagtacctcattt 17933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 17 - 351
Target Start/End: Complemental strand, 14538830 - 14538494
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgaccc 115  Q
    |||||||| || |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| ||||||||||||||||||||    
T  14538830 catcatagacattcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgaccc 14538732  T
Q  116 attgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattctta 214  Q
     | |||||||||  || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14538731 gtcgatttaaaattttcatttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattctta 14538632  T
Q  215 cccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcgg-tagagaggatactttgaagtaactcattttttattcggagt 313  Q
     ||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||  | ||||| |||||||||||| |||||||||||||| ||||    
T  14538631 tccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaaaagaggttactttgaagtacctcattttttattccgagt 14538532  T
Q  314 tgggctctgttccctcttcattttctttttatttcagt 351  Q
     |||| || ||| ||||| |||||||||||||||||||    
T  14538531 cgggccctcttctctctttattttctttttatttcagt 14538494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 29 - 313
Target Start/End: Original strand, 41006408 - 41006693
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  41006408 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 41006506  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
      || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  41006507 ttttcatttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccatttttctctattcttacccattttattc 41006606  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||| |||||||||||||||| |||||||||||||||||| || |  |||| |||||||||||| ||||||||| |||| ||||    
T  41006607 gtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt 41006693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 29 - 313
Target Start/End: Original strand, 41015188 - 41015473
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  41015188 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 41015286  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
      || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  41015287 ttttcatttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccatttttctctattcttacccattttattc 41015386  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||| |||||||||||||||| |||||||||||||||||| || |  |||| |||||||||||| ||||||||| |||| ||||    
T  41015387 gtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt 41015473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 42 - 318
Target Start/End: Complemental strand, 9525634 - 9525357
Alignment:
Q  42 ttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatcctttt 140  Q
    ||||||||||||||||| ||||| ||||||| | ||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||| || ||  ||||    
T  9525634 ttcataagcattgcatt-ctcagcatttcaactagtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaaatttcattttttt 9525536  T
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagt 239  Q
    ||||||| | |||   |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  9525535 aaatctctgggactaggaaacttaaataggggcatctgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagt 9525436  T
Q  240 cgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagttgggc 318  Q
    ||||||||||| | |||| |||||||||||||| ||| ||| |||||| || || |||||||||||||| |||| ||||    
T  9525435 cgggaattttcgttgttttagacgaaatttcggcagaaaggttactttaaaatacctcattttttattccgagtcgggc 9525357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 17 - 278
Target Start/End: Complemental strand, 8197918 - 8197659
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgaccca 116  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||     
T  8197918 catcataggcattcataccattatgttcataagcattgcatt-ctcagcatttcaactggtcaaaattggtgtacttaatatttaagtctcttcgacccg 8197820  T
Q  117 ttgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgaccacttttctctattcttac 215  Q
    |||||||||  | |||   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  8197819 ttgatttaatgaatttt--cttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctatttttac 8197722  T
Q  216 ccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagaga 278  Q
     |||||| |||||| ||| |||  ||| ||| | | |||||| |||| ||||||||| |||||    
T  8197721 acattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacaaaatttcggcagaga 8197659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 50824360 - 50824535
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||| ||    
T  50824360 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggtta 50824459  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccc----tcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||||||||||||| |||| || | || ||| |    |||| |||||||||||||||||||||||    
T  50824460 ctttgaagtacctcattttttattccgagtcggaccctcttctctctttctttattttctttttatttcagtattt 50824535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 50851500 - 50851325
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||| ||    
T  50851500 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggtta 50851401  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccc----tcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||||||||||||| |||| || | || ||| |    |||| |||||||||||||||||||||||    
T  50851400 ctttgaagtacctcattttttattccgagtcggaccctcttctctctttctttattttctttttatttcagtattt 50851325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 176 - 355
Target Start/End: Complemental strand, 27341401 - 27341220
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||| |    
T  27341401 ctgtcataccccaaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggca 27341302  T
Q  275 gagaggatactttgaagtaactca-ttttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    || ||| |||||||||||| |||| |||||||||| ||||  ||| || ||||||||| ||||||||| |||||||||||||    
T  27341301 gaaaggttactttgaagtacctcatttttttattccgagtcaggccctcttccctctttattttctttctatttcagtattt 27341220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 177 - 355
Target Start/End: Original strand, 2211239 - 2211418
Alignment:
Q  177 tgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtag 275  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||| |||||||||||||| |     
T  2211239 tgtcataccctaaattttgaccacttttctctattcttacctattttattcgtatttttaaagtcaggaattttcgtcgtttaagacgaaatttcggcaa 2211338  T
Q  276 agaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    ||||| || ||| || || |||||||||||||| ||||  ||| || ||| ||||| |||||||||||||||||||||||    
T  2211339 agagggtattttaaaatacctcattttttattccgagtcaggccctcttctctctttattttctttttatttcagtattt 2211418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 176 - 313
Target Start/End: Complemental strand, 8154710 - 8154572
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |  |    
T  8154710 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 8154611  T
Q  275 gagaggatactttgaagtaactcattttttattcggagt 313  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  8154610 aagaggttactttgaagtacctcattttttattccgagt 8154572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 184 - 318
Target Start/End: Complemental strand, 9555165 - 9555031
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | |||| |||||||||||||| ||| ||| ||    
T  9555165 cccaaattttgatcacttttctctattcttacccattttactcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggcagaaaggtta 9555066  T
Q  284 ctttgaagtaactcattttttattcggagttgggc 318  Q
    |||| || || |||||||||||||| |||| ||||    
T  9555065 ctttaaaatacctcattttttattccgagtcgggc 9555031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 198
Target Start/End: Original strand, 4454302 - 4454442
Alignment:
Q  58 ttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggag 157  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||| || ||  || |||||| | ||||| |||    
T  4454302 ttcttagtatttcaattggtcaaaattagcgtatttaatatttaagtctcttcgacccatggattccaaaa-ttgatatttgtaaatccctgtgacagag 4454400  T
Q  158 aaacttaaataggggcatctgtcataccc-aaattttgacca 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  4454401 aaacttaaataggggcatctgtcataccctaaattttgacca 4454442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 198
Target Start/End: Complemental strand, 18888431 - 18888291
Alignment:
Q  58 ttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggag 157  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||| || ||  || |||||| | | |||||||    
T  18888431 ttcttagtatttcaattggtcaaaattagcgtatttaatatttaagtctcttcgacccatggattccaaaa-ttgatatttgtaaatccctgggacggag 18888333  T
Q  158 aaacttaaataggggcatctgtcataccc-aaattttgacca 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  18888332 aaacttaaataggggcatctgtcataccctaaattttgacca 18888291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 198
Target Start/End: Complemental strand, 18902832 - 18902692
Alignment:
Q  58 ttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggag 157  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||| || ||  || |||||| | | |||||||    
T  18902832 ttcttagtatttcaattggtcaaaattagcgtatttaatatttaagtctcttcgacccatggattccaaaa-ttgatatttgtaaatccctgggacggag 18902734  T
Q  158 aaacttaaataggggcatctgtcataccc-aaattttgacca 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  18902733 aaacttaaataggggcatctgtcataccctaaattttgacca 18902692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 75 - 203
Target Start/End: Complemental strand, 6959104 - 6958978
Alignment:
Q  75 ggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggca 174  Q
    |||||||||||| ||| |||||||||||||| ||||||||| |||||||||||  ||   | |||||||||||||||||  |||||||||||||||||||    
T  6959104 ggtcaaaattggtgtacttaatatttaagtcccttcgacccgttgatttaaaagttt---ctttttaaatctccgtgacaaagaaacttaaataggggca 6959008  T
Q  175 tctgtcata-cccaaattttgaccactttt 203  Q
    ||||||||| ||||||||||||||||||||    
T  6959007 tctgtcataccccaaattttgaccactttt 6958978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 28470274 - 28470103
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| | ||||||| ||||||||||||||||||||  | | ||  ||    
T  28470274 cccaaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcagaaattttcgtcgtttcagacgaaatttcgaca-aaagatta 28470176  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcatttt-ctttttatttcagtattt 355  Q
    || ||||||| |||||||||||||| |||| || | || ||| ||||| |||||  |||||||||| ||||||    
T  28470175 ctatgaagtacctcattttttattctgagtcggacccttttctctctttattttattttttatttcggtattt 28470103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 43470609 - 43470492
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||| |||||| |||||| |||||| ||||||||||||||| |||| || |||||||  ||||||||||||||||||||| ||||||| ||    
T  43470609 cccaaattttgactactttt-tctatttttaccctttttattcgtatttttaaagccgagaattttattcgtttcagacgaaatttcggcagagaggtta 43470511  T
Q  284 ctttgaagtaactcatttt 302  Q
    |||||||||| ||||||||    
T  43470510 ctttgaagtacctcatttt 43470492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 13553261 - 13553376
Alignment:
Q  75 ggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggca 174  Q
    |||||||||||| ||| |||||||||||||||||||||||  |||||||||||  ||   | ||||||||||| |||||| |||||||||||||||||||    
T  13553261 ggtcaaaattggtgtacttaatatttaagtctcttcgacctgttgatttaaaagttt---ctttttaaatctctgtgacgaagaaacttaaataggggca 13553357  T
Q  175 tctgtcatacccaaatttt 193  Q
    |||||||||||| ||||||    
T  13553358 tctgtcataccccaatttt 13553376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 301
Target Start/End: Original strand, 17919197 - 17919324
Alignment:
Q  175 tctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggt 273  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||| |||| ||  ||||||| |  |||||||||||||||||      
T  17919197 tctgtcataccccaaattttgaccacttttctctatttttatccattttattcgtatttttaaagccgaaaattttcgttatttcagacgaaatttcgtc 17919296  T
Q  274 agagaggatactttgaagtaactcattt 301  Q
     |||||| |||||| ||||| |||||||    
T  17919297 ggagaggttactttaaagtacctcattt 17919324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 17628273 - 17628329
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17628273 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtc 17628329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 11921149 - 11921033
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  11921149 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 11921051  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  11921050 tgtcataccccaattttg 11921033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 22964244 - 22964360
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  22964244 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 22964342  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  22964343 tgtcataccccaattttg 22964360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 7084914 - 7084796
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaact-ttatccttttaaatctccgtgacggagaaacttaaataggggcat 175  Q
    |||||| ||||| |||| |||||||||||||| |||||| ||| |||||||| | || || ||| ||| ||  |||||| ||||||||||||||||||||    
T  7084914 caaaatcggcgtttttatatatttaagtctctccgaccctttggtttaaaaagtattctcttttaaaacctttgtgacgaagaaacttaaataggggcat 7084815  T
Q  176 ctgtcatacccaaattttg 194  Q
    ||||||||||| |||||||    
T  7084814 ctgtcataccccaattttg 7084796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 18349564 - 18349658
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagaga 278  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||| ||| ||| |||| ||| | | |||||| |||||||||||||| |||||    
T  18349564 cccaaattttgacaacttttctctatttttacacattttattcgtacttttaaaatcggaaatgtccgtcgttttagacgaaatttcggcagaga 18349658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 302
Target Start/End: Original strand, 21186755 - 21186872
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||| ||| || ||| |||||||||||||| ||| |||| || |||||||| | |||||| |||||||||||| || |||| ||    
T  21186755 cccaaattttgaccacttttatctgtttttatccattttattcgtacttttaaagccgagaattttcgttgtttcaaacgaaatttcggcagggagg-ta 21186853  T
Q  284 ctttgaagtaactcatttt 302  Q
     |||||| || ||||||||    
T  21186854 ttttgaaatacctcatttt 21186872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 6575799 - 6575915
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||| | |||||||||||||||||||||    
T  6575799 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgatgaagaaacttaaataggggcatc 6575897  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  6575898 tgtcataccccaattttg 6575915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 25271701 - 25271804
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaatttt 193  Q
    |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||||||||| |||||||||     
T  25271701 atatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatctgtcataccccaaatttg 25271799  T
Q  194 gacca 198  Q
    |||||    
T  25271800 gacca 25271804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 10714981 - 10714878
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatc-tccgtgacggagaaacttaaataggggcatctgtcata-cccaaattt 192  Q
    ||||||||||||| ||||||| ||| |||||||  ||   ||||||||| | | ||||||| |||||||||||||||||||||||||||| |||||||||    
T  10714981 atatttaagtctcctcgaccctttggtttaaaaggttc--ccttttaaacccttcgtgacgaagaaacttaaataggggcatctgtcataccccaaattt 10714884  T
Q  193 tgacca 198  Q
     |||||    
T  10714883 ggacca 10714878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 15626966 - 15627060
Alignment:
Q  96 tatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||||||||||||||||||||| || | ||| | || |||  || ||||||| | |||| ||||||||||||||||||||||||||||||| ||||||    
T  15626966 tatttaagtctcttcgacccatcgaatcaaagatttcatc--ttcaaatctctg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 15627060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 18039019 - 18039105
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttc 270  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||| || | || |||   || | |||||||||||||||||    
T  18039019 cccaaattttgaccacttttctcgctttttacccattttattcgtattttaaacgccgagaaggatcgttgtttcagacgaaatttc 18039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 15709167 - 15709208
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaattttgacc 197  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  15709167 agaaacttaaataggggcatctgtcataccccaattttgacc 15709208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 30533 - 30445
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcgg 272  Q
    ||||||||||||||||||||||||||| |||| |||||| || ||| ||| |||  ||| ||| | | |||||| ||||||||||||||    
T  30533 cccaaattttgaccacttttctctatttttacacattttgtttgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcgg 30445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 74203 - 74254
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  74203 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 74254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 4313695 - 4313644
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  4313695 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 4313644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 8612587 - 8612638
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  8612587 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 8612638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 13105739 - 13105688
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  13105739 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccctaatttt 13105688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 3683835 - 3683885
Alignment:
Q  142 aatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  3683835 aatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 3683885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 20447651 - 20447701
Alignment:
Q  142 aatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  20447651 aatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 20447701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 3239012 - 3238924
Alignment:
Q  96 tatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    |||||||||||||||| ||| | || | ||||| || ||  ||| |||||||||| ||| |||||||||||||||||||||||||||||||    
T  3239012 tatttaagtctcttcggcccgtcgaataaaaaatttcata-tttcaaatctccgt-acgaagaaacttaaataggggcatctgtcataccc 3238924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 6201546 - 6201588
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  6201546 agaaacttaaataggggcatctgtcataccccaaattttgacc 6201588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 8812582 - 8812624
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  8812582 agaaacttaaataggggcatctgtcataccccaaattttgacc 8812624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 15529128 - 15529086
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  15529128 agaaacttaaataggggcatctgtcataccccaaattttgacc 15529086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 15923293 - 15923335
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  15923293 gacgaagaaacttaaataggggcatctgtcataccccaatttt 15923335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 37256181 - 37256139
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  37256181 agaaacttaaataggggcatctgtcataccccaaattttgacc 37256139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 46385278 - 46385320
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  46385278 agaaacttaaataggggcatctgtcataccccaaattttgacc 46385320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 5946046 - 5946009
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  5946046 agaaacttaaataggggcatctgtcataccccaatttt 5946009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 8623664 - 8623701
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  8623664 agaaacttaaataggggcatctgtcataccccaatttt 8623701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 13272670 - 13272723
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||||| |||||    
T  13272670 ttttaatcatttcagacaaaatttcggcagagaggatactttgaagtacctcat 13272723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 14881401 - 14881364
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  14881401 agaaacttaaataggggcatctgtcataccccaatttt 14881364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 46393450 - 46393413
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  46393450 agaaacttaaataggggcatctgtcataccccaatttt 46393413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 21616059 - 21616101
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  21616059 agaaacttaaataggggcatctgttataccccaaattttgacc 21616101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 4506032 - 4505979
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  4506032 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 4505979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 15677684 - 15677575
Alignment:
Q  78 caaaattggcgtatttaa-tatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| ||||  |||||||||||||||||||| ||   || |||| |||  | ||  ||| || | ||||| | |||||||||||||||||||    
T  15677684 caaaattggcgtttttatgtatttaagtctcttcgacccctttggtttaaaagtttccctttcaaaaccttcatgacgaacaaacttaaataggggcatc 15677585  T
Q  177 tgtcataccc 186  Q
    ||||||||||    
T  15677584 tgtcataccc 15677575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 16288692 - 16288733
Alignment:
Q  261 acgaaatttcggtagagaggatactttgaagtaactcatttt 302  Q
    |||||||||||| ||||||| |||||||||||| ||||||||    
T  16288692 acgaaatttcggcagagaggttactttgaagtacctcatttt 16288733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 17657630 - 17657683
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  17657630 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 17657683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 27976552 - 27976605
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  27976552 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 27976605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 1477758 - 1477814
Alignment:
Q  245 attttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattt 301  Q
    ||||| ||| |||||||| ||||||||| || |||| |||||||||||| |||||||    
T  1477758 atttttatcatttcagacaaaatttcggcagggaggttactttgaagtacctcattt 1477814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 17618174 - 17618130
Alignment:
Q  255 tttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||||||| ||||||||| || ||||||||||||||||| |||||    
T  17618174 tttcagacaaaatttcggcagggaggatactttgaagtacctcat 17618130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 355
Target Start/End: Original strand, 12996319 - 12996655
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgaccca 116  Q
    ||||||||||| |||||| ||||| ||||||| ||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  12996319 catcataggcattcataccattatattcataaccattgcatt-ctcagtatttcaactggtcaaaattggtgtacttaatatttaagtctcttcgaccca 12996417  T
Q  117 ttgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttac 215  Q
    |||||||||| | |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12996418 ttgatttaaagaatttt--cttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttac 12996515  T
Q  216 ccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagttg 315  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||      
T  12996516 ccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggtagagaggttactttgaagtacctcattttttattccgagtca 12996615  T
Q  316 ggctctgttccctcttcattttctttttatttcagtattt 355  Q
    | | || ||| |||||  ||||||||||||||||||||||    
T  12996616 gtccctcttctctctttgttttctttttatttcagtattt 12996655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 29 - 313
Target Start/End: Complemental strand, 8094496 - 8094210
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  8094496 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 8094398  T
Q  128 acttta-tccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgaccacttttctctattcttacccattttatt 225  Q
      || | |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8094397 ttttcattttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttacccattttatt 8094298  T
Q  226 cgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
     ||||||| |||||||||||||||| |||||||||||||||||| || | ||||| |||||||||||| ||||||||| |||| ||||    
T  8094297 tgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactttgaagtacctcatttttgattccgagt 8094210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 176 - 355
Target Start/End: Original strand, 52295603 - 52295784
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| |    
T  52295603 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggca 52295702  T
Q  275 gagaggatactttgaagtaactcatttttt-attcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||  |||||||||||| |||||||||| |||| |||| |||| || ||| ||||| |||||||||||||||||||||||    
T  52295703 gagagattactttgaagtacctcattttttgattccgagtcgggccctcttctctctttattttctttttatttcagtattt 52295784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 27343748 - 27343577
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||   ||||||| ||    
T  27343748 cccaaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacagagaggtta 27343649  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||||||||||||| |||| || | || ||| ||||| |||||||||||||||||||||||    
T  27343648 ctttgaagtacctcattttttattccgagtcggaccctcttctctctttattttctttttatttcagtattt 27343577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 17 - 270
Target Start/End: Original strand, 33188623 - 33188859
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgaccca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||||||||||||| ||| || ||||||||||||||| |||||     
T  33188623 catcataggcactcatactattatgttcataagcattgcatta-tcaacatttcaattggtcaaaattggtgtacttgatatttaagtctctttgacccg 33188721  T
Q  117 ttgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgaccacttttctctattcttac 215  Q
    |||||||||||| ||  |||||                ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| |||     
T  33188722 ttgatttaaaaatttcttcctt----------------gagaaacttaaataggggcatctgtcataccccaaattttgacaactttt-tctatttttat 33188804  T
Q  216 ccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttc 270  Q
    || ||||||| ||||||| ||||  | |||||||| |||||||||||||||||||    
T  33188805 cctttttatttgtatttttaaagctgagaattttcgtcgtttcagacgaaatttc 33188859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 8103145 - 8103016
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| || | ||||| ||    
T  8103145 cccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggtta 8103046  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| ||||||||| |||| ||||    
T  8103045 ctttgaagtacctcatttttgattccgagt 8103016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 4523737 - 4523608
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||| |  | ||||| ||    
T  4523737 cccaaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggtta 4523638  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  4523637 ctttgaagtacctcattttttattccgagt 4523608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 21532361 - 21532190
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||  | | ||  ||    
T  21532361 cccaaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgaca-aaagatta 21532263  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcatttt-ctttttatttcagtattt 355  Q
    |||||||||| |||||||||||||| |||| || | || ||| ||||| |||||  |||||||||| ||||||    
T  21532262 ctttgaagtacctcattttttattctgagtcggacccttttctctctttattttattttttatttcggtattt 21532190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 1877889 - 1877756
Alignment:
Q  66 atttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatcctt-ttaaatctccgtgacggagaaactta 164  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||||  |||| || ||  || | ||||| | |||||||| |||||||    
T  1877889 atttcaattggtcaaaattagcgtacttaatatttaagtctctccgacccatggattctaaaa-ttgatatttgtaaaatccctgtgacggaaaaactta 1877791  T
Q  165 aataggggcatctgtcataccc-aaattttgacca 198  Q
    |||||||||||||||||||||| ||||||||||||    
T  1877790 aataggggcatctgtcataccctaaattttgacca 1877756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 10638336 - 10638400
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaatttt 249  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  10638336 cccaaattttgaccacttttctctatttttacccattttattcgtatttt-aaagtcgggaatttt 10638400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 12428535 - 12428418
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||| | | ||||||| |  |||||||||||||||||    ||||  ||    
T  12428535 cccaaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacgaagagttta 12428436  T
Q  284 ctttgaagtaactcattt 301  Q
    |||||||||| |||||||    
T  12428435 ctttgaagtacctcattt 12428418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 75 - 197
Target Start/End: Complemental strand, 22142244 - 22142125
Alignment:
Q  75 ggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggca 174  Q
    |||||||||||| ||| |||||||||||||||||||||||  || |||||||   ||   ||||||||||||||| |||| |||||||||||||||||||    
T  22142244 ggtcaaaattggtgtacttaatatttaagtctcttcgacctgttaatttaaaggttt---ccttttaaatctccg-gacgaagaaacttaaataggggca 22142149  T
Q  175 tctgtcatac-ccaaattttgacc 197  Q
    |||||||||| |||| ||||||||    
T  22142148 tctgtcatactccaatttttgacc 22142125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 14721423 - 14721323
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaact-ttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||||||||||||| |||||| ||| |||||||| | || || ||| ||| ||  |||||| ||||||||||||||||||||||||||||||| ||||||    
T  14721423 atatttaagtctctccgaccctttggtttaaaaagtattctcttttaaaacctttgtgacgaagaaacttaaataggggcatctgtcataccccaatttt 14721324  T
Q  194 g 194  Q
    |    
T  14721323 g 14721323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 26213250 - 26213146
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaatttt 193  Q
    |||||||||| |||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||| |||||||||     
T  26213250 atatttaagtatcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccccaaatttg 26213151  T
Q  194 gacca 198  Q
    |||||    
T  26213150 gacca 26213146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 355
Target Start/End: Original strand, 10638404 - 10638485
Alignment:
Q  274 agagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    ||||||| |||||||||||| |||||||||||||| |||| || | || | | ||||| |||||||||||||||||||||||    
T  10638404 agagaggttactttgaagtacctcattttttattccgagtcggaccctctcctctctttattttctttttatttcagtattt 10638485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 19771903 - 19771994
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||| |||||||  || |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  19771903 atatttaagtctcctcgaccctgtggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccc 19771994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 3366017 - 3366068
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  3366017 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 3366068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 3382545 - 3382494
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  3382545 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 3382494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 9190521 - 9190572
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  9190521 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 9190572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 3424339 - 3424454
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||| || ||||||||| | |||||| |||||||| || ||| |||| |  |||  ||| ||||| |||||||||||||||   ||||| ||    
T  3424339 cccaaattttgatcatttttctctaattttaccccttttattcttactttaaaagccaagaaagttcgtcgttccagacgaaatttcgg--cagaggtta 3424436  T
Q  284 ctttgaagtaactcattt 301  Q
    |||||||||| |||||||    
T  3424437 ctttgaagtacctcattt 3424454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 12614249 - 12614207
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  12614249 gacgaagaaacttaaataggggcatctgtcataccccaatttt 12614207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 12614329 - 12614287
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  12614329 gacgaagaaacttaaataggggcatctgtcataccccaatttt 12614287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 16360146 - 16360188
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  16360146 gacgaagaaacttaaataggggcatctgtcatacccgaatttt 16360188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 16720867 - 16720825
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  16720867 gacgaagaaacttaaataggggcatctgtcataccccaatttt 16720825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 22712404 - 22712446
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  22712404 agaaacttaaataggggcatctgtcataccccaaattttgacc 22712446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 12402911 - 12402956
Alignment:
Q  235 aaagtcgggaattttcatcgtttcagacgaaatttcggtagagagg 280  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||    
T  12402911 aaagtcaggaattttcgtcgtttcagacgaaatttcggcagagagg 12402956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 19772241 - 19772313
Alignment:
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    ||||||| ||||||| |  |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  19772241 gtattttaaaagtcgcgttttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 19772313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 55788768 - 55788803
Alignment:
Q  158 aaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||| ||||||    
T  55788768 aaacttaaataggggcatctgtcataccccaatttt 55788803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 15880136 - 15880094
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||    
T  15880136 gacgaagaaacttaaataagggcatctgtcataccccaatttt 15880094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 19647405 - 19647352
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  19647405 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 19647352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 10814333 - 10814393
Alignment:
Q  295 ctcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||||||| ||||  | | || ||||||||| ||||||||||||||| |||||||    
T  10814333 ctcattttttattccgagtcagaccctcttccctctttattttctttttattttagtattt 10814393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 20554970 - 20555021
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| |||||||| ||||||||||| |||||||||| ||||||    
T  20554970 aaatctccg-gacgaagaaactttaataggggcatatgtcataccccaatttt 20555021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 29 - 355
Target Start/End: Original strand, 23315 - 23644
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||||| ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  23315 tcatactagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 23413  T
Q  128 actttatcctttt-aaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttatt 225  Q
    | || ||  |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23414 atttcattttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttacccattttatt 23513  T
Q  226 cgtattttc-aaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagttgggctctgtt 324  Q
    ||||||||  ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||||| |||| |||| |||| || ||    
T  23514 cgtattttttaaagtcgggaattttcatcatttctgacgaaatttcggtagagaggttactttgaagtacctcatttttgattccgagtcgggccctctt 23613  T
Q  325 ccctcttcattttctttttatttcagtattt 355  Q
    |||||||  |||||||||||||| |||||||    
T  23614 ccctctttgttttctttttatttaagtattt 23644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 4e-91; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 29 - 355
Target Start/End: Complemental strand, 20373127 - 20372799
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||| ||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  20373127 tcataccagtatattcatgagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 20373029  T
Q  128 actttatcctttt-aaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttatt 225  Q
    | || ||  |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  20373028 atttcattttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttaccgattttatt 20372929  T
Q  226 cgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagttgggctctgttc 325  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||| |||| |  | || |||    
T  20372928 cgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacagagaggttactttgaagtacctcattttttattccgagtcgaaccctcttc 20372829  T
Q  326 cctcttcattttctttttatttcagtattt 355  Q
     ||| | ||||||| ||||||||| |||||    
T  20372828 tctcattattttctctttatttcattattt 20372799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 29 - 313
Target Start/End: Complemental strand, 24957059 - 24956774
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  24957059 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 24956961  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
      || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24956960 ttttcatttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttacccattttattc 24956861  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||| |||||||||||||||| |||||||||||||||||| || |  |||| |||||||||||| ||||||||| |||| ||||    
T  24956860 gtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt 24956774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 29 - 313
Target Start/End: Original strand, 28852402 - 28852687
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  28852402 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 28852500  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
      || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  28852501 ttttcatttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccactttcctctattcttacccattttattc 28852600  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||| ||||| | ||||||||  ||||||||||||||||| || | ||||| |||||||||||| |||||||||||||| ||||    
T  28852601 gtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt 28852687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 29186335 - 29186164
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  | ||||| ||    
T  29186335 cccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaagaggtta 29186236  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||  |||||||||||||| |||| || | || ||| ||||| ||||| |||||||||||||||||    
T  29186235 ctttgaagtgcctcattttttattccgagtcggacccttttctctctttattttatttttatttcagtattt 29186164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 20398692 - 20398521
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||| ||    
T  20398692 cccaaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacagagaggtta 20398593  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||||||||||||| |||| |  | || ||| ||| | ||||||| ||||||||| |||||    
T  20398592 ctttgaagtacctcattttttattccgagtcgaaccctcttctctcattattttctctttatttcattattt 20398521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 176 - 349
Target Start/End: Complemental strand, 23350142 - 23349968
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| || || |||||||||||||||||| |    
T  23350142 ctgtcataccccaaattttgaccatttttctctatttttacccattttattcgtatttttaaagtcgggaattctcgtcatttcagacgaaatttcggca 23350043  T
Q  275 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttca 349  Q
     ||||| |||||||||||| |||||||||||||| |||| |||| || ||| ||||| ||||||| |||||||||    
T  23350042 aagaggttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctctttatttca 23349968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 176 - 313
Target Start/End: Complemental strand, 24965375 - 24965237
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |    
T  24965375 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 24965276  T
Q  275 gagaggatactttgaagtaactcattttttattcggagt 313  Q
      |||| |||||||||||| ||||||||| |||| ||||    
T  24965275 aggaggttactttgaagtacctcatttttgattccgagt 24965237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 43598103 - 43597974
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| || | ||||| ||    
T  43598103 cccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaaagaggtta 43598004  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  43598003 ctttgaagtacctcattttttattccgagt 43597974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 43603595 - 43603466
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| || | ||||| ||    
T  43603595 cccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaaagaggtta 43603496  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  43603495 ctttgaagtacctcattttttattccgagt 43603466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 43609087 - 43608958
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| || | ||||| ||    
T  43609087 cccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaaagaggtta 43608988  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  43608987 ctttgaagtacctcattttttattccgagt 43608958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 31410898 - 31411069
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||| |||||  ||||||||| |||||| | |||||||||||  | ||||| ||    
T  31410898 cccaaattttgaccacatttctctattctaacccattttattcgtatttttaaagttaggaattttcgtcgtttaaaacgaaatttcgacaaagaggtta 31410997  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||| ||||||||||||||  ||| |||| || ||| ||||| || ||||||||||||||||||||    
T  31410998 ctttgaagtacctcattttttattctcagtcgggccctcttctctctttatcttctttttatttcagtattt 31411069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 176 - 313
Target Start/End: Complemental strand, 1728225 - 1728087
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| |  |    
T  1728225 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttgaca 1728126  T
Q  275 gagaggatactttgaagtaactcattttttattcggagt 313  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  1728125 aagaggttactttgaagtacctcattttttattccgagt 1728087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 28843948 - 28844077
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||  ||||||||||||||||| || | ||||| ||    
T  28843948 cccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggtta 28844047  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  28844048 ctttgaagtacctcattttttattccgagt 28844077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 177 - 303
Target Start/End: Original strand, 31421789 - 31421916
Alignment:
Q  177 tgtcatacccaaa-ttttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtag 275  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||||||||| ||||||||  |     
T  31421789 tgtcatacccaaaattttgaccacttttctctattcttacccattttattcgtatttttgaagtcggaaattttcgtcgtttcagacaaaatttcgacaa 31421888  T
Q  276 agaggatactttgaagtaactcattttt 303  Q
    ||| | |||||||||||| |||||||||    
T  31421889 agatgttactttgaagtacctcattttt 31421916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 347695 - 347580
Alignment:
Q  75 ggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggca 174  Q
    |||||||||||| ||| |||||||||||||||||||||||  |||||||||||  ||   | ||||||||||| |||||| |||||||||||||||||||    
T  347695 ggtcaaaattggtgtacttaatatttaagtctcttcgacctgttgatttaaaagttt---ctttttaaatctctgtgacgaagaaacttaaataggggca 347599  T
Q  175 tctgtcatacccaaatttt 193  Q
    |||||||||||| ||||||    
T  347598 tctgtcataccccaatttt 347580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 19223563 - 19223666
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| ||||| || |||||||||| ||||| |||  ||||||| ||    
T  19223563 cccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattgtcgtcgtttcagatgaaatctcgacagagaggtta 19223662  T
Q  284 cttt 287  Q
    ||||    
T  19223663 cttt 19223666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 23037561 - 23037652
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||||||||||| ||| |||||||| |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  23037561 atatttaagtctcttcgaccctttggtttaaaaattttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccc 23037652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 20384227 - 20384361
Alignment:
Q  66 atttcaattggtcaaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaactta 164  Q
    |||||||  |||| |||||||||| |||  ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||    
T  20384227 atttcaaacggtccaaattggcgtctttttatatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaactta 20384326  T
Q  165 aataggggcatctgtcata-cccaaattttgacca 198  Q
    ||||||||||||||||||| ||||||||| |||||    
T  20384327 aataggggcatctgtcataccccaaatttggacca 20384361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 78 - 198
Target Start/End: Original strand, 23634744 - 23634866
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||  ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||    
T  23634744 caaaattggcgtctttttatatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatc 23634843  T
Q  177 tgtcata-cccaaattttgacca 198  Q
    ||||||| ||||||||| |||||    
T  23634844 tgtcataccccaaatttggacca 23634866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 78 - 198
Target Start/End: Complemental strand, 23829407 - 23829285
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||  ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||    
T  23829407 caaaattggcgtctttttatatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatc 23829308  T
Q  177 tgtcata-cccaaattttgacca 198  Q
    ||||||| ||||||||| |||||    
T  23829307 tgtcataccccaaatttggacca 23829285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 3479684 - 3479568
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||| | ||| |||||||| ||  || ||| ||||||  |||||| |||||||||||||||||||||    
T  3479684 caaaattggcgtttttatatatttaagtctctccgacactttggtttaaaaagttc-tcttttaaaatctttgtgacgaagaaacttaaataggggcatc 3479586  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  3479585 tgtcataccccaattttg 3479568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 21988984 - 21988880
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaatttt 193  Q
    ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||| |||||||||     
T  21988984 atatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccccaaatttg 21988885  T
Q  194 gacca 198  Q
    |||||    
T  21988884 gacca 21988880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 27226050 - 27225934
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  | |||| |||||||||||||||||||||    
T  27226050 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaaattc-tcttttaaaacctttgcgacgaagaaacttaaataggggcatc 27225952  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  27225951 tgtcataccccaattttg 27225934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 21852990 - 21852899
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||| ||||||||||||||||||    
T  21852990 atatttaagtctcttcgaccctttggtttaaaatttttcccttttaaaaccttcgtgacgaagaaacttaaattggggcatctgtcataccc 21852899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 33838110 - 33838007
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaatttt 193  Q
    ||||||||||||| ||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||| |||||||||     
T  33838110 atatttaagtctcctcgaccctttggtttaaaag-tttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccccaaatttg 33838012  T
Q  194 gacca 198  Q
    |||||    
T  33838011 gacca 33838007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 29901194 - 29901245
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  29901194 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 29901245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 36454592 - 36454643
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  36454592 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 36454643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 5435811 - 5435768
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  5435811 agaaacttaaataggggcatctgtcataccccaaattttgacca 5435768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 11805191 - 11805140
Alignment:
Q  148 cgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  11805191 cgtgacgaagaaacttaaataggggcatctgtcataccccaaatttggacca 11805140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 12172966 - 12172915
Alignment:
Q  148 cgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  12172966 cgtgacgaagaaacttaaataggggcatctgtcataccccaaatttggacca 12172915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 24062735 - 24062685
Alignment:
Q  142 aatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  24062735 aatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 24062685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 26081186 - 26081135
Alignment:
Q  148 cgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  26081186 cgtgacgaagaaacttaaataggggcatctgtcataccccaaatttggacca 26081135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 7794267 - 7794309
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  7794267 agaaacttaaataggggcatctgtcataccccaaattttgacc 7794309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 11939700 - 11939658
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  11939700 agaaacttaaataggggcatctgtcataccccaaattttgacc 11939658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 12387338 - 12387296
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  12387338 agaaacttaaataggggcatctgtcataccccaaattttgacc 12387296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 15779830 - 15779788
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  15779830 agaaacttaaataggggcatctgtcataccccaaattttgacc 15779788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 17961853 - 17961895
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  17961853 agaaacttaaataggggcatctgtcataccccaaattttgacc 17961895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 23028053 - 23028007
Alignment:
Q  255 tttcagacgaaatttcggtagagaggatactttgaagtaactcattt 301  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||    
T  23028053 tttcagacgaaatttcggcagagaggttactttgaagtacctcattt 23028007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 23037923 - 23037969
Alignment:
Q  254 gtttcagacgaaatttcggtagagaggatactttgaagtaactcatt 300  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  23037923 gtttcagacgaaatttcggcagagaggttactttgaagtacctcatt 23037969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 23577531 - 23577489
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  23577531 gacgaagaaacttaaataggggcatctgtcataccccaatttt 23577489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 26869298 - 26869340
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  26869298 gacgaagaaacttaaataggggcatctgtcataccccaatttt 26869340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 31525309 - 31525351
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  31525309 agaaacttaaataggggcatctgtcataccccaaattttgacc 31525351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 34473508 - 34473550
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  34473508 gacgaagaaacttaaataggggcatctgtcataccccaatttt 34473550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 36371375 - 36371333
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  36371375 agaaacttaaataggggcatctgtcataccccaaattttgacc 36371333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 36996038 - 36995996
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  36996038 agaaacttaaataggggcatctgtcataccccaaattttgacc 36995996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 1805219 - 1805256
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  1805219 agaaacttaaataggggcatctgtcataccccaatttt 1805256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 7255155 - 7255118
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  7255155 agaaacttaaataggggcatctgtcataccccaatttt 7255118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 21696051 - 21696088
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  21696051 agaaacttaaataggggcatctgtcataccccaatttt 21696088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 25532833 - 25532889
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  25532833 aaatctccg-gacgaagaaacttaaataggggcatctgtcatatcccaatttttgacc 25532889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 37584913 - 37584950
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  37584913 agaaacttaaataggggcatctgtcataccccaatttt 37584950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 20092853 - 20092802
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||||| ||||||    
T  20092853 aaatctccg-gacgaagaaacttaaataggagcatctgtcataccccaatttt 20092802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 20639963 - 20639912
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||| ||||||    
T  20639963 aaatctccg-gacgaagaaacttaaatagggacatctgtcataccccaatttt 20639912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 41099833 - 41099745
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcgg 272  Q
    |||||||||||||||||||| |||||| |||| |||||  |||||| ||| |||  ||| ||| | | |||||| ||||||||||||||    
T  41099833 cccaaattttgaccacttttatctatttttacacatttcgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcgg 41099745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 21988673 - 21988620
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  21988673 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 21988620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 21997317 - 21997264
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  21997317 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 21997264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 23606421 - 23606368
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  23606421 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 23606368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 23635076 - 23635129
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  23635076 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 23635129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 23829075 - 23829022
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  23829075 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 23829022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 23837816 - 23837763
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  23837816 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 23837763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 31550511 - 31550458
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| ||||| |||||||||||||| |||||    
T  31550511 ttttaatcatttcagacaaaatttcggcagagatgatactttgaagtacctcat 31550458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 21852635 - 21852579
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 302  Q
    |||| ||| ||||| |||||||||||| || |||| |||||||||||| ||||||||    
T  21852635 ttttaatcatttcaaacgaaatttcggcagggaggttactttgaagtacctcatttt 21852579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 21869159 - 21869103
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 302  Q
    |||| ||| ||||| |||||||||||| || |||| |||||||||||| ||||||||    
T  21869159 ttttaatcatttcaaacgaaatttcggcagggaggttactttgaagtacctcatttt 21869103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 29 - 355
Target Start/End: Original strand, 5994548 - 5994879
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| || |||||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| ||||||| |||    
T  5994548 tcatacgagtatattcataagcattgcatt-cttagtatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgattttaaa 5994646  T
Q  128 act---ttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgaccacttttctctattcttacccatttta 223  Q
    | |   || |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5994647 aatttcttttttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttacccatttta 5994746  T
Q  224 ttcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttttt-attcggagttgggctctg 322  Q
    |||||||||| |||||||| ||||||| ||||||||||| |||||| || | ||||| |||||||||||| |||||||||| |||| |||| |||| ||     
T  5994747 ttcgtatttttaaagtcggaaattttcgtcgtttcagacaaaattttggcaaagaggttactttgaagtacctcattttttgattccgagtcgggccctc 5994846  T
Q  323 ttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||  |||||||||||||| |||||||    
T  5994847 ttccctctttgttttctttttattttagtattt 5994879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 25991858 - 25992029
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||| ||    
T  25991858 cccaaatgttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagaagaaatttcggtagagaggtta 25991957  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||||||||||||| |||| || | || ||| ||||| |||| || ||||||||| |||||    
T  25991958 ctttgaagtacctcattttttattcagagtcggaccctcttctctctttatttactctttatttcattattt 25992029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 23925343 - 23925514
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||||||||||||| | ||    
T  23925343 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcatttttgacgaaatttcggtagagatgtta 23925442  T
Q  284 ctttgaagtaactcatttttt-attcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||||||||| |||| ||||  ||| || |||||||||  |||| |||||||||| ||||||    
T  23925443 ctttgaagtacctcattttttgattccgagtcaggccctcttccctctttgtttt-tttttatttcggtattt 23925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 176 - 355
Target Start/End: Original strand, 33298084 - 33298263
Alignment:
Q  176 ctgtcatacccaaa-ttttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  |    
T  33298084 ctgtcataccccaacttttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgaca 33298183  T
Q  275 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
     ||| | |||||||||||| |||||||||||||| |||| || | || ||| ||||| ||||| |||||||||||||||||    
T  33298184 aaga-gttactttgaagtacctcattttttattccgagtaggacccttttctctctttattttatttttatttcagtattt 33298263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 25550303 - 25550432
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||| || ||||||| ||    
T  25550303 cccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcaaacgaaattttggcagagaggtta 25550402  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  25550403 ctttgaagtacctcattttttattccgagt 25550432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 13825711 - 13825845
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||  ||||||| ||    
T  13825711 cccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcaggaattttcgtcgtttcagacgaaatttcgacagagaggtta 13825810  T
Q  284 ctttgaagtaactcattttttattcggagttgggc 318  Q
    |||||||||| ||||||||| |||| |||| ||||    
T  13825811 ctttgaagtacctcatttttgattccgagtcgggc 13825845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 5004069 - 5004198
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |  |||| ||    
T  5004069 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggtta 5004168  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| ||||||||| |||| ||||    
T  5004169 ctttgaagtacctcatttttgattccgagt 5004198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 30824586 - 30824457
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| || | ||||| ||    
T  30824586 cccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggtta 30824487  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| ||||||||| |||| ||||    
T  30824486 ctttgaagtacctcatttttgattccgagt 30824457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 25506598 - 25506469
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||||| ||    
T  25506598 cccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgttttagacgaaatttcggcagagaggtta 25506499  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||| || || ||||||||| |||| ||||    
T  25506498 ctttaaaatacctcatttttgattccgagt 25506469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 35091733 - 35091610
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||| || |  |||| ||    
T  35091733 cccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcggaaattttcgtcgtttcagacgaaattttggcaaggaggtta 35091634  T
Q  284 ctttgaagtaactcattttttatt 307  Q
    |||||||||| |||||||||||||    
T  35091633 ctttgaagtacctcattttttatt 35091610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 11279845 - 11279974
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||  ||||||||||||||||| || | ||||| ||    
T  11279845 cccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggtta 11279944  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  11279945 ctttgaagtacctcattttttattccgagt 11279974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 176 - 305
Target Start/End: Complemental strand, 15391677 - 15391547
Alignment:
Q  176 ctgtcata-cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    |||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||  |    
T  15391677 ctgtcatatcccaaattttgaccacttttctctatccttgcccattttattcgtatttttaaagccaggaattttcgtcgtttcagacgaaatttcgaca 15391578  T
Q  275 gagaggatactttgaagtaactcatttttta 305  Q
     ||||| |||||||||||| |||||||||||    
T  15391577 aagaggttactttgaagtacctcatttttta 15391547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 27549530 - 27549662
Alignment:
Q  66 atttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaa 165  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| | |||||| ||||  |||  || ||  || |||||| | |||||||||||||||||    
T  27549530 atttcaattggtcaaaattagcgtacttaatatttaagtctctcccacccatggattctaaag-ttgatatttgtaaatccctgtgacggagaaacttaa 27549628  T
Q  166 ataggggcatctgtcataccc-aaattttgacca 198  Q
    ||||||||||||||||||||| ||||||||||||    
T  27549629 ataggggcatctgtcataccctaaattttgacca 27549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 195
Target Start/End: Original strand, 25711608 - 25711773
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaa 128  Q
    ||||| |||||  ||||| ||||| ||||| || |||||||| ||||||||||||| | ||| |||||||||||||||||||||||||| ||||  |||     
T  25711608 tcatattattacattcatgagcatggcatt-cttagtatttcgattggtcaaaattagagtacttaatatttaagtctcttcgacccatggattccaaa- 25711705  T
Q  129 ctttatccttt-taaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttga 195  Q
      ||  | ||| |||||| | |||||||||||||||||||||||||||||||||||||| |||||||||    
T  25711706 -gttggcatttgtaaatccctgtgacggagaaacttaaataggggcatctgtcataccctaaattttga 25711773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 18207945 - 18207829
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  18207945 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 18207847  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  18207846 tgtcataccccaattttg 18207829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 28310800 - 28310916
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  28310800 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 28310898  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  28310899 tgtcataccccaattttg 28310916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 16642031 - 16642122
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  16642031 atatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccc 16642122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 13490192 - 13490297
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| |  |||  ||||||||||| |  |||||||| |||| |||| |    
T  13490192 ctgtcataccccaaattttgaccacttttctctatttttatccattttattcgtatctgtaaaaccgggaattttcgttatttcagacaaaatctcggca 13490291  T
Q  275 gagagg 280  Q
    ||||||    
T  13490292 gagagg 13490297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 5489176 - 5489132
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  5489176 cccaaattttgaccacttttctctattcttacccattttattcgt 5489132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 16586721 - 16586811
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  16586721 atatttaagtctcttcgaccc-ttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccc 16586811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 16608659 - 16608569
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  16608659 atatttaagtctcttcgaccc-ttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccc 16608569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 18123948 - 18124051
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaatttt 193  Q
    ||||||||||||| ||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||| |||||||||     
T  18123948 atatttaagtctcctcgaccctttggtttaaaag-tttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccccaaatttg 18124046  T
Q  194 gacca 198  Q
    |||||    
T  18124047 gacca 18124051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 26526708 - 26526640
Alignment:
Q  235 aaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttt 303  Q
    |||||||||||||||| |||||||||||||||| |||| |||| || ||||||||| || |||||||||    
T  26526708 aaagtcgggaattttcgtcgtttcagacgaaatatcggcagagtggttactttgaattacctcattttt 26526640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 21361345 - 21361254
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||| |||||||  || |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  21361345 atatttaagtctcctcgaccctgtggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccc 21361254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 23965327 - 23965236
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||| |||||||  || |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  23965327 atatttaagtctcctcgaccctgtggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccc 23965236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 5489124 - 5489051
Alignment:
Q  282 tactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    ||||||||||||  |||||||| ||||  ||| || | |||||||||||| |||||||||||||||||||||||    
T  5489124 tactttgaagtacttcatttttgattccaagtcggaccctgttccctctttattttctttttatttcagtattt 5489051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 12391022 - 12391073
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  12391022 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 12391073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 19719801 - 19719852
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  19719801 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 19719852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 20051140 - 20051024
Alignment:
Q  75 ggtcaaaattggcgta-tttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggc 173  Q
    |||||||||||| ||| ||| ||||||||||||||||| |||||  | | ||| | || |||  || ||||||| | |||| ||||||||||||||||||    
T  20051140 ggtcaaaattggagtacttttatatttaagtctcttcggcccatcaaatcaaagatttcatc--ttcaaatctctg-gacgaagaaacttaaataggggc 20051044  T
Q  174 atctgtcatacccaaatttt 193  Q
    ||||||||||||| ||||||    
T  20051043 atctgtcataccccaatttt 20051024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 22067405 - 22067354
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  22067405 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 22067354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 22764981 - 22764930
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  22764981 aaatctcc-tgacgaagaaacttaaataggggcatctgtcataccccaatttt 22764930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 27049956 - 27049905
Alignment:
Q  148 cgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  27049956 cgtgacgaagaaacttaaataggggcatctgtcataccccaaatttggacca 27049905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 27517284 - 27517331
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||    
T  27517284 gacgaagaaacttaaataggggcatctgtcataccccaaattttgacc 27517331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 616005 - 615963
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  616005 agaaacttaaataggggcatctgtcataccccaaattttgacc 615963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 1549177 - 1549219
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  1549177 gacgaagaaacttaaataggggcatctgtcataccccaatttt 1549219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 9131791 - 9131749
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  9131791 agaaacttaaataggggcatctgtcataccccaaattttgacc 9131749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 16816943 - 16816901
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  16816943 agaaacttaaataggggcatctgtcataccccaaattttgacc 16816901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 20452749 - 20452707
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  20452749 gacgaagaaacttaaataggggcatctgtcataccccaatttt 20452707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 20041020 - 20040983
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  20041020 agaaacttaaataggggcatctgtcataccccaatttt 20040983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 24143652 - 24143615
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  24143652 agaaacttaaataggggcatctgtcataccccaatttt 24143615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 26981808 - 26981764
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  26981808 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccc 26981764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 11053700 - 11053760
Alignment:
Q  175 tctgtcataccc-aaattttgaccacttttctctattcttacc-cattttattcgtatttt 233  Q
    |||||||||||| ||||||||||||||||| |||||| |||||  ||||||||||||||||    
T  11053700 tctgtcataccccaaattttgaccacttttttctatttttaccaaattttattcgtatttt 11053760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 15140726 - 15140779
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  15140726 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 15140779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 23985100 - 23985047
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  23985100 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 23985047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 28127510 - 28127457
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  28127510 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 28127457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 2e-89; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 29 - 313
Target Start/End: Complemental strand, 15944770 - 15944485
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  15944770 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 15944672  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
      || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15944671 ttttcatttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttacccattttattc 15944572  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||| |||||||||||||||| |||||||||||||||||| || |  |||| |||||||||||| ||||||||| |||| ||||    
T  15944571 gtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt 15944485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 29 - 313
Target Start/End: Original strand, 35146781 - 35147066
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  35146781 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 35146879  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
      || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35146880 ttttcatttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttacccattttattc 35146979  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||| |||||||||||||||| |||||||||||||||||| || |  |||| |||||||||||| ||||||||| |||| ||||    
T  35146980 gtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt 35147066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 29 - 313
Target Start/End: Complemental strand, 42566142 - 42565857
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  42566142 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 42566044  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
      || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  42566043 ttttcatttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccactttcctctattcttacccattttattc 42565944  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||| ||||| | ||||||||  ||||||||||||||||| || | ||||| |||||||||||| |||||||||||||| ||||    
T  42565943 gtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt 42565857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 29 - 313
Target Start/End: Original strand, 20621373 - 20621655
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaa 128  Q
    |||||| | ||| |||||||||||  |||| || || |||| || ||||||||||||| ||| ||  |||||||||||||||||||| |||||||||| |    
T  20621373 tcataccagtatattcataagcatgacatt-cttagcatttgaactggtcaaaattggtgtacttggtatttaagtctcttcgacccgttgatttaaaga 20621471  T
Q  129 ctttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattcg 227  Q
     |||   |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20621472 atttt--cttttaaatctccgtgacagagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttacccattttattcg 20621569  T
Q  228 tattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    | ||||  ||||||||||||||| ||||||||||| ||||||||  | ||| | |||||||||||| |||||||||||||| ||||    
T  20621570 tgtttttgaagtcgggaattttcgtcgtttcagacaaaatttcgacaaagatgttactttgaagtacctcattttttattctgagt 20621655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 278
Target Start/End: Original strand, 24292215 - 24292475
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgaccca 116  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||     
T  24292215 catcataggcattcataccattatgttcataagcattgcatt-ctcagcatttcaactggtcaaaattggtgtacttaatatttaagtctcttcgacccg 24292313  T
Q  117 ttgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgaccacttttctctattcttac 215  Q
    |||||||||| | ||  | |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  24292314 ttgatttaaagagtt--ttcttttaaatctctgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctttatttttac 24292411  T
Q  216 ccattttattcgtattttcaaagtcg-ggaattttcatcgtttcagacgaaatttcggtagaga 278  Q
     |||||| |||||| ||| |||  ||   ||| | | |||||| ||||||||||||||||||||    
T  24292412 acattttgttcgtacttttaaaaccgaaaaatgtccgtcgtttaagacgaaatttcggtagaga 24292475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 204 - 355
Target Start/End: Original strand, 35037884 - 35038035
Alignment:
Q  204 ctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttt 303  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| || |||||||||    
T  35037884 ctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgatagagaggttactttgaaatacctcattttt 35037983  T
Q  304 tattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    ||||| ||||  ||| || ||||||||| |||||||||||||||||||||||    
T  35037984 tattccgagtcaggccctcttccctctttattttctttttatttcagtattt 35038035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 35138591 - 35138730
Alignment:
Q  175 tctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggt 273  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||     
T  35138591 tctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc 35138690  T
Q  274 agagaggatactttgaagtaactcattttttattcggagt 313  Q
    |  |||| |||||||||||| ||||||||| |||| ||||    
T  35138691 aaggaggttactttgaagtacctcatttttgattccgagt 35138730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 41233911 - 41233772
Alignment:
Q  175 tctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggt 273  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||     
T  41233911 tctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggc 41233812  T
Q  274 agagaggatactttgaagtaactcattttttattcggagt 313  Q
    |  |||| |||||||||||| ||||||||| |||| ||||    
T  41233811 aaggaggttactttgaagtacctcatttttgattccgagt 41233772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 14582933 - 14583062
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |  |||| ||    
T  14582933 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggtta 14583032  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| ||||||||| |||| ||||    
T  14583033 ctttgaagtacctcatttttgattccgagt 14583062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 15953129 - 15953000
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |  |||| ||    
T  15953129 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggtta 15953030  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| ||||||||| |||| ||||    
T  15953029 ctttgaagtacctcatttttgattccgagt 15953000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 177 - 313
Target Start/End: Complemental strand, 38168422 - 38168285
Alignment:
Q  177 tgtcatac-ccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtag 275  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |     
T  38168422 tgtcatactccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 38168323  T
Q  276 agaggatactttgaagtaactcattttttattcggagt 313  Q
     |||| |||||||||||| ||||||||| |||| ||||    
T  38168322 ggaggttactttgaagtacctcatttttgattccgagt 38168285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 42574610 - 42574481
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||  ||||||||||||||||| || | ||||| ||    
T  42574610 cccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggtta 42574511  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  42574510 ctttgaagtacctcattttttattccgagt 42574481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 17687455 - 17687361
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagaga 278  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  17687455 cccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcagaga 17687361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 20372370 - 20372251
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||  | | ||| ||    
T  20372370 cccaaattttgaccacttttctctatccttgcccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgaca-aaaggtta 20372272  T
Q  284 ctttgaagtaactcatttttt 304  Q
    |||||||||| ||||||||||    
T  20372271 ctttgaagtacctcatttttt 20372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 25483609 - 25483712
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| |||||||| |||||||||||||||| |||  ||||||| ||    
T  25483609 cccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacagagaggtta 25483708  T
Q  284 cttt 287  Q
    ||||    
T  25483709 cttt 25483712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 25491215 - 25491318
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| |||||||| |||||||||||||||| |||  ||||||| ||    
T  25491215 cccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacagagaggtta 25491314  T
Q  284 cttt 287  Q
    ||||    
T  25491315 cttt 25491318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 44372713 - 44372800
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcg 271  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  44372713 cccaaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcg 44372800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 44388624 - 44388711
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcg 271  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  44388624 cccaaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcg 44388711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 26719881 - 26719749
Alignment:
Q  66 atttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaa 165  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| | |||||| ||||  |||  || ||  || |||||| | |||||||||||||||||    
T  26719881 atttcaattggtcaaaattagcgtacttaatatttaagtctctcccacccatggattctaaag-ttgatatttgtaaatccctgtgacggagaaacttaa 26719783  T
Q  166 ataggggcatctgtcataccc-aaattttgacca 198  Q
    ||||||||||||||||||||| ||||||||||||    
T  26719782 ataggggcatctgtcataccctaaattttgacca 26719749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 198
Target Start/End: Complemental strand, 34530120 - 34529980
Alignment:
Q  58 ttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggag 157  Q
    |||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||  ||| || ||   | |||||| |  ||||| ||    
T  34530120 ttcttagtatttcaattggtcaaaattagcgtatctaatatttaagtctcttcgacccatggattt-caaagttgatatctgtaaatccctctgacgaag 34530022  T
Q  158 aaacttaaataggggcatctgtcataccc-aaattttgacca 198  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  34530021 aaactaaaataggggcatctgtcataccctaaattttgacca 34529980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 21852919 - 21852790
Alignment:
Q  66 atttcaattggtcaaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaactta 164  Q
    |||||||  |||| |||||||||| |||  ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||    
T  21852919 atttcaaacggtccaaattggcgtctttttatatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaactta 21852820  T
Q  165 aataggggcatctgtcatacccaaattttg 194  Q
    |||||||||||||||||||||| |||||||    
T  21852819 aataggggcatctgtcataccccaattttg 21852790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 34705462 - 34705578
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  34705462 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 34705560  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  34705561 tgtcataccccaattttg 34705578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 35303745 - 35303862
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||| | ||||||||  | |||||| |||||||| |||||| |||| |  ||| |||| ||||||||||||||||||||| ||||||| ||    
T  35303745 cccaaattttgactatttttctctgattttaccccttttattcttattttaaaagccaagaaatttcgtcgtttcagacgaaatttcggcagagaggtta 35303844  T
Q  284 ctttgaagtaactcattt 301  Q
     ||||||||| |||||||    
T  35303845 atttgaagtacctcattt 35303862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 42398249 - 42398365
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  42398249 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 42398347  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  42398348 tgtcataccccaattttg 42398365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 16281274 - 16281378
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaatttt 193  Q
    ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||| |||||||||     
T  16281274 atatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccccaaatttg 16281373  T
Q  194 gacca 198  Q
    |||||    
T  16281374 gacca 16281378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 177 - 280
Target Start/End: Complemental strand, 27606709 - 27606606
Alignment:
Q  177 tgtcatac-ccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtag 275  Q
    |||||||| |||||||||||| ||||||||||||| ||| | |||||||||||| ||| |||| ||||||||||  |||| |||||||||||||||| ||    
T  27606709 tgtcatactccaaattttgactacttttctctatttttatcaattttattcgtacttttaaagacgggaatttt-gtcgtctcagacgaaatttcggcag 27606611  T
Q  276 agagg 280  Q
    |||||    
T  27606610 agagg 27606606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 45489495 - 45489379
Alignment:
Q  75 ggtcaaaattggcgta-tttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggc 173  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||| || | ||| | || |||  || ||||||| | |||| ||||||||||||||||||    
T  45489495 ggtcaaaattggtgtacttttatatttaagtctcttcgacccatcgaatcaaagatttcatc--ttcaaatctctg-gacgaagaaacttaaataggggc 45489399  T
Q  174 atctgtcatacccaaatttt 193  Q
    ||||||||||||| ||||||    
T  45489398 atctgtcataccccaatttt 45489379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 24285704 - 24285798
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagaga 278  Q
    |||||||||||||||||||||| |||| |||| |||||| |||||| ||| |||   || ||||| | |||||| ||||||||||||||||||||    
T  24285704 cccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaaactggaaatttccgtcgtttaagacgaaatttcggtagaga 24285798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 26903396 - 26903296
Alignment:
Q  179 tcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagag 277  Q
    |||||||| |||||||||||||||||||||||| |||| |||||| |||||| ||| |||  ||  ||| | |||||||| |||||||||||||| ||||    
T  26903396 tcataccctaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccgaaaatgtccatcgttttagacgaaatttcggcagag 26903297  T
Q  278 a 278  Q
    |    
T  26903296 a 26903296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 42249512 - 42249418
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagaga 278  Q
    ||||||||||||||||||||||||||| |||| |||||  |||||| ||| ||| |||  ||| | | |||||| |||||||||||||| |||||    
T  42249512 cccaaattttgaccacttttctctatttttacacatttcgttcgtacttttaaaatcgaaaatgtccgtcgttttagacgaaatttcggcagaga 42249418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 5871211 - 5871160
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  5871211 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 5871160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 17879295 - 17879346
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  17879295 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 17879346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 3757757 - 3757706
Alignment:
Q  148 cgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  3757757 cgtgacgaagaaacttaaataggggcatctgtcataccccaaatttggacca 3757706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 12388360 - 12388402
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  12388360 agaaacttaaataggggcatctgtcataccccaaattttgacc 12388402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 34070661 - 34070567
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagaga 278  Q
    |||||||||||| |||||||||||||| |||| |||||| |||||| ||| |||  ||| ||| | | |||||| |||| ||||||||| |||||    
T  34070661 cccaaattttgatcacttttctctatttttacacattttgttcgtacttttaaaaccggtaatgtccgtcgttttagacaaaatttcggcagaga 34070567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 18973214 - 18973177
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  18973214 agaaacttaaataggggcatctgtcataccccaatttt 18973177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 18989389 - 18989312
Alignment:
Q  225 tcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 302  Q
    |||| |||| |||| ||||||||||  |||  |||||||||||| ||||||||||| |||||| ||||| ||||||||    
T  18989389 tcgtctttttaaagccgggaatttttgtcgcatcagacgaaattacggtagagaggttactttcaagtacctcatttt 18989312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 21755915 - 21755878
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  21755915 agaaacttaaataggggcatctgtcataccccaatttt 21755878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 22954061 - 22954102
Alignment:
Q  158 aaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  22954061 aaacttaaataggggcatctgtcataccccaaattttgacca 22954102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 19800700 - 19800816
Alignment:
Q  75 ggtcaaaattggcgta-tttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggc 173  Q
    |||||||||||| ||| ||| ||||||||||||||||| | ||| || | ||| | || |||  || ||||||| | |||| ||||||||||||||||||    
T  19800700 ggtcaaaattggtgtacttttatatttaagtctcttcggcgcatcgaatcaaagatttcatc--ttcaaatctctg-gacgaagaaacttaaataggggc 19800796  T
Q  174 atctgtcatacccaaatttt 193  Q
    |||||||| |||| ||||||    
T  19800797 atctgtcacaccccaatttt 19800816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 21751372 - 21751321
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||    
T  21751372 aaatctccg-gacgaagaaacttaaataggggcatctgtcgtaccccaatttt 21751321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 21064667 - 21064702
Alignment:
Q  158 aaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21064667 aaacttaaataggggcatctgtcataccccaatttt 21064702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 40387112 - 40387070
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||    
T  40387112 gacgaagaaacttaaataagggcatctgtcataccccaatttt 40387070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 27683434 - 27683381
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  27683434 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 27683381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 29 - 313
Target Start/End: Original strand, 31548375 - 31548660
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  31548375 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 31548473  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
      || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31548474 ttttcatttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttacccattttattc 31548573  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||| |||||||||||||||| |||||||||||||||||| || |  |||| |||||||||||| ||||||||| |||| ||||    
T  31548574 gtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt 31548660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 17 - 301
Target Start/End: Complemental strand, 29221711 - 29221429
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgaccca 116  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||     
T  29221711 catcataggcattcatactaatatgttcataagcattgcatt-ctcagtatttcaattggtcaaaattggcgtacttgatatttaagtctcttctacccg 29221613  T
Q  117 ttgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgaccacttttctctattcttac 215  Q
    |||||||||||| || || |||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||    
T  29221612 ttgatttaaaaatttcat-cttttaaatccccgtgacggagaaacttaaatagggacatctgtcataccccaaattttgactacttttctctatttttac 29221514  T
Q  216 ccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattt 301  Q
    |||||||||||||||||| |||||||| |||||||    |||||||||||||||||| ||||||| || |||||| || |||||||    
T  29221513 ccattttattcgtatttttaaagtcggaaattttcgctatttcagacgaaatttcggcagagagg-tattttgaaatacctcattt 29221429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 29 - 313
Target Start/End: Complemental strand, 3433105 - 3432818
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||    
T  3433105 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccattgatttaaaa 3433007  T
Q  128 actttatcctttt--aaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttat 224  Q
      || ||  ||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  3433006 ttttcatttttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccactttcctctattcttacccattttat 3432907  T
Q  225 tcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| |  | ||||| |||||||||||| |||||||||||||| ||||    
T  3432906 tcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactttgaagtacctcattttttattccgagt 3432818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 32137811 - 32137640
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||   | | | | ||    
T  32137811 cccaaattttgatcacttttctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaataagtta 32137712  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||||||||||||| |||| |||| || ||| ||||| ||||||| |||||||||||||||    
T  32137711 ctttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctctttatttcagtattt 32137640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 41746750 - 41746586
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcgg-tagagaggat 282  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||  | ||||| |    
T  41746750 cccaaattttgaccacttttatctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggcaaaagaggtt 41746651  T
Q  283 actttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttattt 347  Q
    ||||||||||| |||||||||||||| |||| |||| || ||| ||||| |||||||||||||||    
T  41746650 actttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctttttattt 41746586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 31539962 - 31540091
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |  |||| ||    
T  31539962 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggtta 31540061  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| ||||||||| |||| ||||    
T  31540062 ctttgaagtacctcatttttgattccgagt 31540091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 35104121 - 35103992
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||| || |  |||| ||    
T  35104121 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagttgggaattttcgtcgtttcagacgaaattttggcaaggaggtta 35104022  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| ||||||||| |||| ||||    
T  35104021 ctttgaagtacctcatttttgattccgagt 35103992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 28993701 - 28993567
Alignment:
Q  58 ttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggag 157  Q
    |||| |||||| ||||||||||||||| ||||| ||||||||||||||||| | |||||| ||||  |||  || ||  || |||||| | |||||||||    
T  28993701 ttcttagtattccaattggtcaaaattagcgtacttaatatttaagtctctcccacccatggattctaaag-ttgatatttgtaaatccctgtgacggag 28993603  T
Q  158 aaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||| ||||||    
T  28993602 aaacttaaataggggcatctgtcataccctaatttt 28993567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 2391560 - 2391628
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattgg 86  Q
    |||||||||||||||| ||||||| ||||||| ||||||| ||||||| |||||||||||||||||||||    
T  2391560 catcataggcactcatgctattatattcataatcattgca-ttctcagcatttcaattggtcaaaattgg 2391628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 44320249 - 44320132
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||| || | || |||   || ||||||||||||||||||| | || |||| ||    
T  44320249 cccaaattttgaccacttttctcgctttttacccattttattcgtattttaaacgccgagaaggatcgtcgtttcagacgaaatttcagcagggaggtta 44320150  T
Q  284 ctttgaagtaactcattt 301  Q
    |||  ||||| |||||||    
T  44320149 cttgaaagtacctcattt 44320132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 6198018 - 6197902
Alignment:
Q  75 ggtcaaaattggcgta-tttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggc 173  Q
    ||||||||||||  || ||| ||||||||||||||||||||||| || | ||| | || |||  || ||||||| | |||| ||||||||||||||||||    
T  6198018 ggtcaaaattggtatacttttatatttaagtctcttcgacccatcgaatcaaagatttcatc--ttcaaatctctg-gacgaagaaacttaaataggggc 6197922  T
Q  174 atctgtcatacccaaatttt 193  Q
    ||||||||||||| ||||||    
T  6197921 atctgtcataccccaatttt 6197902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 21498955 - 21498861
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagaga 278  Q
    ||||||||||||||||||||||||||| |||| |||||  |||||| ||| |||  ||| ||| | | |||||| |||||||||||||| |||||    
T  21498955 cccaaattttgaccacttttctctatttttacacatttcgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggcagaga 21498861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 301
Target Start/End: Complemental strand, 8241487 - 8241438
Alignment:
Q  252 tcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattt 301  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  8241487 tcgtttcagacgaaatttcggtagagaggttactttaaagtacctcattt 8241438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 1961603 - 1961654
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  1961603 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 1961654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 2336157 - 2336106
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  2336157 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 2336106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 13450142 - 13450202
Alignment:
Q  295 ctcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    ||||||||| |||| |||| ||||||| ||| ||||| |||||||||||||||||||||||    
T  13450142 ctcatttttgattccgagtcgggctctcttctctctttattttctttttatttcagtattt 13450202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 19367440 - 19367491
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  19367440 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 19367491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 28457562 - 28457673
Alignment:
Q  184 cccaaattttgaccacttttctc-tattcttacccattttattc-gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagagga 281  Q
    ||||||||||||||||||||||| | || ||||||||||||||  ||||||| || | |  |||   || ||||||||||||||||||||  |||||||     
T  28457562 cccaaattttgaccacttttctcgtttttttacccattttattttgtattttaaacgccaagaaggatcgtcgtttcagacgaaatttcgacagagaggt 28457661  T
Q  282 tactttgaagta 293  Q
    ||||||||||||    
T  28457662 tactttgaagta 28457673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 31560078 - 31560129
Alignment:
Q  148 cgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  31560078 cgtgacgaagaaacttaaataggggcatctgtcataccccaaatttggacca 31560129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 5624288 - 5624246
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  5624288 agaaacttaaataggggcatctgtcataccccaaattttgacc 5624246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 27168675 - 27168717
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  27168675 gacgaagaaacttaaataggggcatctgtcataccccaatttt 27168717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 51058444 - 51058359
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttc 270  Q
    |||||||||||| ||||||||| | |||| |  ||||||||||||||||| ||||  |||||||||| | |||||| ||||||||||    
T  51058444 cccaaattttgatcacttttctttgttct-attcattttattcgtatttttaaagctgggaattttcgttgtttcaaacgaaatttc 51058359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 8579341 - 8579413
Alignment:
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    ||||||| ||||||| |  |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  8579341 gtattttaaaagtcgcgttttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 8579413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 14813663 - 14813628
Alignment:
Q  158 aaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||| ||||||    
T  14813663 aaacttaaataggggcatctgtcataccccaatttt 14813628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 12465751 - 12465698
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  12465751 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 12465698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 5e-87; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 29 - 313
Target Start/End: Complemental strand, 39837775 - 39837490
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| | ||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  39837775 tcataccagtatattcataagcattgcatt-ctcagcatttcaactagtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 39837677  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
      || ||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  39837676 ttttcatttttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccactttcctctattcttacccattttattc 39837577  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |  | ||||| |||||||||||| |||||||||||||| ||||    
T  39837576 gtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactttgaagtacctcattttttattccgagt 39837490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 29 - 313
Target Start/End: Complemental strand, 17664852 - 17664568
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaa 128  Q
    |||||| | ||| ||||||||||| ||||| || || |||| || ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  17664852 tcataccagtatattcataagcatggcatt-cttagcatttgaactggtcaaaattggtgtacttaatatttaagtctcttcgacccgttgatttaaaaa 17664754  T
Q  129 ctttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgaccacttttctctattcttacccattttattcg 227  Q
     || ||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  17664753 tttcattgttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctatccttgcccattttattcg 17664654  T
Q  228 tattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    |||||| | ||||||||||||||||||||||||||||||||| |  | ||| | |||||||||||| |||||||||||||| ||||    
T  17664653 tatttttagagtcgggaattttcatcgtttcagacgaaattttgacaaagaagttactttgaagtacctcattttttattccgagt 17664568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 29 - 354
Target Start/End: Complemental strand, 26873817 - 26873490
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||  |||||||||||||||||||| |||||||||||    
T  26873817 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtactttgtatttaagtctcttcgacccgttgatttaaaa 26873719  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
    | || ||  |||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26873718 atttcatttttttaaatctccatgacggagaaacttaaatgggggcatctgtcataccccaaattttgaccacttttctctattcttacccattttattc 26873619  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttttt-attcggagttgggctctgttc 325  Q
    ||||||  || ||||| ||||||| ||||||||||||||||||||  | ||||| |||||| ||||| || ||||||| |||| |||| ||||  | |||    
T  26873618 gtatttgtaatgtcggaaattttcgtcgtttcagacgaaatttcgacaaagaggttactttaaagtaccttattttttgattccgagtagggccgtcttc 26873519  T
Q  326 cctcttcattttctttttatttcagtatt 354  Q
     ||||| ||||||||||||||||||||||    
T  26873518 tctctttattttctttttatttcagtatt 26873490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 17973573 - 17973707
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| ||    
T  17973573 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcagagaggtta 17973672  T
Q  284 ctttgaagtaactcattttttattcggagttgggc 318  Q
    |||||||||| |||||||||||||| |||| ||||    
T  17973673 ctttgaagtacctcattttttattccgagtcgggc 17973707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 177 - 313
Target Start/End: Complemental strand, 25579877 - 25579740
Alignment:
Q  177 tgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtag 275  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |     
T  25579877 tgtcataccctaaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 25579778  T
Q  276 agaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||| |||||||||||| |||||||||||||| ||||    
T  25579777 agaggttactttgaagtacctcattttttattccgagt 25579740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 30938290 - 30938419
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |  |||| ||    
T  30938290 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggtta 30938389  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| ||||||||| |||| ||||    
T  30938390 ctttgaagtacctcatttttgattccgagt 30938419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 184 - 354
Target Start/End: Complemental strand, 26876111 - 26875940
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  ||||||||||||||||||||  | ||||| ||    
T  26876111 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaatgtcggaaatttttgtcgtttcagacgaaatttcgacaaagaggtta 26876012  T
Q  284 ctttgaagtaactcatttttt-attcggagttgggctctgttccctcttcattttctttttatttcagtatt 354  Q
    |||| || || |||||||||| |||| |||| ||||  | ||| ||||| ||||||||||||||||||||||    
T  26876011 ctttaaaatacctcattttttgattccgagtagggccatcttctctctttattttctttttatttcagtatt 26875940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 39845662 - 39845541
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |  | ||||| ||    
T  39845662 cccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggtta 39845563  T
Q  284 ctttgaagtaactcatttttta 305  Q
    |||||||||| |||||||||||    
T  39845562 ctttgaagtacctcatttttta 39845541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 75 - 233
Target Start/End: Original strand, 6670612 - 6670768
Alignment:
Q  75 ggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggca 174  Q
    |||||||||||| ||| |||||||||||||||||||||||  |||||||||||  ||   | |||||||||||||||||| |||||||||||||||||||    
T  6670612 ggtcaaaattggtgtacttaatatttaagtctcttcgacctgttgatttaaaagttt---ctttttaaatctccgtgacgaagaaacttaaataggggca 6670708  T
Q  175 tctgtcata-cccaaattttgaccacttttctctattcttacc-cattttattcgtatttt 233  Q
    ||||||||| |||||||||||||||||||| |||||| |||||  ||||||||||||||||    
T  6670709 tctgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttt 6670768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 1407130 - 1407001
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||  ||||||||||||||||| || | ||||| ||    
T  1407130 cccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgtgaattttcgccgtttcagacgaaattttggcaaagaggtta 1407031  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  1407030 ctttgaagtacctcattttttattccgagt 1407001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 4839839 - 4839715
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||  | ||| | ||    
T  4839839 cccaaattttgaccgcttttctctattcttacctattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaagaagtta 4839740  T
Q  284 ctttgaagtaactcattttttattc 308  Q
    |||||||||| ||||||||| ||||    
T  4839739 ctttgaagtacctcatttttgattc 4839715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 17683853 - 17683724
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||||| |||||||||||||||||| |  | ||| | ||    
T  17683853 cccaaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcgtcgtttcagacgaaattttgacaaagaagtta 17683754  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  17683753 ctttgaagtacctcattttttattccgagt 17683724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 16773097 - 16773230
Alignment:
Q  66 atttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatcctt-ttaaatctccgtgacggagaaactta 164  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||||  |||| || ||  || | ||||| | |||||||| |||||||    
T  16773097 atttcaattggtcaaaattagcgtacttaatatttaagtctctccgacccatggattctaaaa-ttgatatttgtaaaatccctgtgacggaaaaactta 16773195  T
Q  165 aataggggcatctgtcataccc-aaattttgacca 198  Q
    |||||||||||||||||||||| ||||||||||||    
T  16773196 aataggggcatctgtcataccctaaattttgacca 16773230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 25795454 - 25795592
Alignment:
Q  58 ttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttt-taaatctccgtgacgga 156  Q
    |||| |||||||| ||||||||||||| | ||| |||||||||||||||||||||||||| ||||  ||    ||  | ||| |||||| | |||||| |    
T  25795454 ttcttagtatttccattggtcaaaattagtgtacttaatatttaagtctcttcgacccatggattccaa---gttggcatttgtaaatccctgtgacgaa 25795550  T
Q  157 gaaacttaaataggggcatctgtcataccc-aaattttgacc 197  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  25795551 gaaacttaaataggggcatctgtcataccctaaattttgacc 25795592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 14216609 - 14216725
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  14216609 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 14216707  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  14216708 tgtcataccccaattttg 14216725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 19848648 - 19848743
Alignment:
Q  91 tttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||| ||| |||||||||||||||||||||||||| ||||    
T  19848648 tttaatatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtaacgaagaaacttaaataggggcatctgtcagaccc 19848743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 39631610 - 39631568
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  39631610 agaaacttaaataggggcatctgtcataccccaaattttgacc 39631568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 22157064 - 22157027
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  22157064 agaaacttaaataggggcatctgtcataccccaatttt 22157027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 16066196 - 16066251
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaattttgacc 197  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||| ||| ||||    
T  16066196 aaatctccg-gacgaagaaacttaaataggggcatttgtcatacccaattttggacc 16066251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 25853130 - 25853087
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacc 185  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  25853130 aaatctccg-gacgaagaaacttaaataggggcatctgtcatacc 25853087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 32006699 - 32006750
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||| ||||||    
T  32006699 aaatctccg-gacgaagaaacttaaataggggcatatgtcataccccaatttt 32006750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 4582215 - 4582306
Alignment:
Q  187 aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagaga 278  Q
    |||||||||||||||||||||||| |||| |||||| ||| || ||| |||  ||| ||| | | || ||| |||||||||||||| |||||    
T  4582215 aaattttgaccacttttctctatttttacacattttgttcatacttttaaaaccggaaatgtccgtcattttagacgaaatttcggcagaga 4582306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 21589652 - 21589699
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatac-ccaaattttgacc 197  Q
    |||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  21589652 gacgaagaaacttaaataggggcatctgtcatactccaatttttgacc 21589699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 20733134 - 20733176
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||    
T  20733134 gacgaagaaactcaaataggggcatctgtcataccccaatttt 20733176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 23090611 - 23090667
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 302  Q
    |||| ||| ||| ||||||||||| |  |||||||||||||||||||| ||||||||    
T  23090611 ttttaatcattttagacgaaatttggacagagaggatactttgaagtacctcatttt 23090667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 25700273 - 25700329
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 302  Q
    |||| ||| ||||| |||||||||||| || |||| |||||||||||| ||||||||    
T  25700273 ttttaatcatttcaaacgaaatttcggaagggaggttactttgaagtacctcatttt 25700329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 29 - 313
Target Start/End: Original strand, 13839383 - 13839668
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaa 127  Q
    |||||| | ||| ||||||||||||||||| ||||| ||||||| ||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||    
T  13839383 tcataccagtatattcataagcattgcatt-ctcagcatttcaactggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaa 13839481  T
Q  128 actttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttacccattttattc 226  Q
      || ||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  13839482 ttttcatttttttaaatcaccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccactttcctctattcttatccattttattc 13839581  T
Q  227 gtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcattttttattcggagt 313  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |  | ||||| |||||||||||| |||||||||||||| ||||    
T  13839582 gtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactttgaagtacctcattttttattccgagt 13839668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 29 - 233
Target Start/End: Complemental strand, 4941789 - 4941585
Alignment:
Q  29 tcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaa 128  Q
    |||||| | ||| ||||||||||| ||||| || || |||| || || |||||||||| ||| ||| |||||||||||||||||||| ||||||||||||    
T  4941789 tcataccagtatattcataagcatagcatt-cttagcatttgaactgttcaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaaa 4941691  T
Q  129 ctttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgaccacttttctctattcttacccattttattcg 227  Q
     || ||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4941690 tttcattgttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccccaaattttgaccacttttctctattcttacccattttattcg 4941591  T
Q  228 tatttt 233  Q
    ||||||    
T  4941590 tatttt 4941585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 175 - 355
Target Start/End: Original strand, 10439935 - 10440116
Alignment:
Q  175 tctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggt 273  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||     
T  10439935 tctgtcataccccaaattttgaccacttttctctattcttgcccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggc 10440034  T
Q  274 agagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    ||||||| |||||| ||||| |||||||||||||| ||||  | | || ||  ||||| |||||||||||||||||||||||    
T  10440035 agagaggttactttaaagtacctcattttttattccgagtcagaccctcttttctctttattttctttttatttcagtattt 10440116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 18304449 - 18304326
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || | ||||| ||    
T  18304449 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggtta 18304350  T
Q  284 ctttgaagtaactcattttttatt 307  Q
    |||||||||| |||||||||||||    
T  18304349 ctttgaagtacctcattttttatt 18304326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 174 - 313
Target Start/End: Complemental strand, 4952465 - 4952325
Alignment:
Q  174 atctgtcatacc-caaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcgg 272  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||    
T  4952465 atctgtcatacctcaaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaattttgg 4952366  T
Q  273 tagagaggatactttgaagtaactcattttttattcggagt 313  Q
     | ||||| |||||||||||| |||||||||||||| ||||    
T  4952365 caaagaggttactttgaagtacctcattttttattccgagt 4952325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 176 - 313
Target Start/End: Original strand, 13831499 - 13831637
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |  |    
T  13831499 ctgtcataccctaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 13831598  T
Q  275 gagaggatactttgaagtaactcattttttattcggagt 313  Q
     ||||| |||||||||||| |||||||||||||| ||||    
T  13831599 aagaggttactttgaagtacctcattttttattccgagt 13831637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 12978463 - 12978592
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |  |||| ||    
T  12978463 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggtta 12978562  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| ||||||||| |||| ||||    
T  12978563 ctttgaagtacctcatttttgattccgagt 12978592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 1889065 - 1888933
Alignment:
Q  66 atttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaa 165  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| | |||||| ||||  |||  || ||  || |||||| | |||||||||||||||||    
T  1889065 atttcaattggtcaaaattagcgtacttaatatttaagtctctcccacccatggattctaaag-ttgatatttgtaaatccctgtgacggagaaacttaa 1888967  T
Q  166 ataggggcatctgtcataccc-aaattttgacca 198  Q
    ||||||||||||||||||||| ||||||||||||    
T  1888966 ataggggcatctgtcataccctaaattttgacca 1888933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 30244775 - 30244871
Alignment:
Q  177 tgtcatacc-caaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcgg 272  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||| |||||| ||||||||| | ||||||| || ||||||||    
T  30244775 tgtcatacctcaaattttgaccacttttctctatttttatccattttattcgtatttttaaagtcaggaattttcgttgtttcagtcgtaatttcgg 30244871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 38410625 - 38410733
Alignment:
Q  78 caaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatct 177  Q
    |||||||||||| ||| ||||||||||||||||||| | ||| |||||||  ||| || ||| ||| || ||||||| ||||||||||||||||||||||    
T  38410625 caaaattggcgttttttatatttaagtctcttcgacactttggtttaaaagttttctcttttaaaaccttcgtgacgaagaaacttaaataggggcatct 38410724  T
Q  178 gtcataccc 186  Q
    |||||||||    
T  38410725 gtcataccc 38410733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 280
Target Start/End: Original strand, 30255413 - 30255516
Alignment:
Q  177 tgtcatacccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtaga 276  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||  | ||| | ||||||| | ||||||| || |||||||| |||    
T  30255413 tgtcatacccaaattttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaatttcggcaga 30255512  T
Q  277 gagg 280  Q
    ||||    
T  30255513 gagg 30255516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 17599713 - 17599614
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaattttg 194  Q
    ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  17599713 atatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccccaattttg 17599614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 2561210 - 2561326
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  2561210 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 2561308  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  2561309 tgtcataccccaattttg 2561326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 15197550 - 15197666
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  15197550 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 15197648  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  15197649 tgtcataccccaattttg 15197666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 27442002 - 27442111
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||  ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||    
T  27442002 caaaattggcgtctttttatatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatc 27442101  T
Q  177 tgtcataccc 186  Q
    ||||||||||    
T  27442102 tgtcataccc 27442111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 177 - 280
Target Start/End: Original strand, 30245568 - 30245672
Alignment:
Q  177 tgtcatacccaaatttt-gaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtag 275  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||  | ||| | ||||||| | ||||||| || |||||||| ||    
T  30245568 tgtcatacccaaatttttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaatttcggaag 30245667  T
Q  276 agagg 280  Q
    |||||    
T  30245668 agagg 30245672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 29029257 - 29029375
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaact-ttatccttttaaatctccgtgacggagaaacttaaataggggcat 175  Q
    |||||| ||||| |||| |||||||||||||| |||||| ||| |||||||| | || || ||| ||| ||  |||||| ||||||||||||||||||||    
T  29029257 caaaatcggcgtttttatatatttaagtctctccgaccctttggtttaaaaagtattctcttttaaaacctttgtgacgaagaaacttaaataggggcat 29029356  T
Q  176 ctgtcatacccaaattttg 194  Q
    ||||||||||| |||||||    
T  29029357 ctgtcataccccaattttg 29029375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 29094051 - 29094167
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| || | |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  29094051 caaaattggcgttttcatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 29094149  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  29094150 tgtcataccccaattttg 29094167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 301
Target Start/End: Complemental strand, 21663089 - 21662962
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgta-ttttcaaagtcgggaattttcatcgtttcagacgaaatttcggt 273  Q
    ||||||||||| ||||||||| ||||||| ||| || |||||||||||||||||| |||| |||| || || | ||| |||||| ||||||||||||       
T  21663089 ctgtcataccccaaattttgatcacttttatctgtttttacccattttattcgtattttttaaagccgagagtcttcgtcgttttagacgaaatttcaac 21662990  T
Q  274 agagaggatactttgaagtaactcattt 301  Q
    || |||| |||||||||||| |||||||    
T  21662989 agggaggttactttgaagtacctcattt 21662962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 78 - 198
Target Start/End: Complemental strand, 16123482 - 16123362
Alignment:
Q  78 caaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatct 177  Q
    |||||||||||| ||  ||||||||||||| ||||||| ||| |||||||  |||  | ||| ||| || || |||| ||||||||||||||||||||||    
T  16123482 caaaattggcgttttatatatttaagtctcctcgaccctttggtttaaaag-tttcccttttaaaaccttcgagacgaagaaacttaaataggggcatct 16123384  T
Q  178 gtcata-cccaaattttgacca 198  Q
    |||||| ||||||||| |||||    
T  16123383 gtcataccccaaatttggacca 16123362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 12593412 - 12593466
Alignment:
Q  138 tttaaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  12593412 tttaaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 12593466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 16241967 - 16242058
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||||||||||| ||| |||||||   ||  | ||| ||| || ||||||| |||||||||||||||||||||||| ||||||    
T  16241967 atatttaagtctcttcgaccctttggtttaaaagtgttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgttataccc 16242058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 1955863 - 1955797
Alignment:
Q  120 atttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||  || ||| |||||||||   ||||||||||||||||||||||||||||||||||||||    
T  1955863 atttaaaagtttcatctttttaaatccttgtgacggagaaacttaaataggggcatctgtcataccc 1955797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 852868 - 852919
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  852868 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 852919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 1210872 - 1210923
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  1210872 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 1210923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 16265954 - 16265903
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  16265954 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 16265903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 34363241 - 34363190
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  34363241 aaatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 34363190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 561180 - 561129
Alignment:
Q  148 cgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  561180 cgtgacgaagaaacttaaataggggcatctgtcataccccaaatttggacca 561129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 3424770 - 3424720
Alignment:
Q  142 aatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  3424770 aatctccg-gacgaagaaacttaaataggggcatctgtcataccccaatttt 3424720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 5201801 - 5201750
Alignment:
Q  148 cgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  5201801 cgtgacgaagaaacttaaataggggcatctgtcataccccaaatttggacca 5201750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 27968637 - 27968586
Alignment:
Q  148 cgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacca 198  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  27968637 cgtgacgaagaaacttaaataggggcatctgtcataccccaaatttggacca 27968586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 8817858 - 8817900
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  8817858 agaaacttaaataggggcatctgtcataccccaaattttgacc 8817900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 9474214 - 9474256
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  9474214 agaaacttaaataggggcatctgtcataccccaaattttgacc 9474256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 15767198 - 15767156
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  15767198 gacgaagaaacttaaataggggcatctgtcataccccaatttt 15767156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 16282678 - 16282636
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  16282678 gacgaagaaacttaaataggggcatctgtcataccccaatttt 16282636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 16388621 - 16388579
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  16388621 agaaacttaaataggggcatctgtcataccccaaattttgacc 16388579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 22085519 - 22085561
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  22085519 gacgaagaaacttaaataggggcatctgtcataccccaatttt 22085561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 23878781 - 23878739
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  23878781 agaaacttaaataggggcatctgtcataccccaaattttgacc 23878739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 30365100 - 30365058
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  30365100 agaaacttaaataggggcatctgtcataccccaaattttgacc 30365058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 34132913 - 34132871
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  34132913 gacgaagaaacttaaataggggcatctgtcataccccaatttt 34132871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 845501 - 845538
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  845501 agaaacttaaataggggcatctgtcataccccaatttt 845538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 42631345 - 42631308
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  42631345 agaaacttaaataggggcatctgtcataccccaatttt 42631308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 794159 - 794104
Alignment:
Q  142 aatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||| |||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  794159 aatctccg-gacgaagaaacttaaataggggcatctgtcatatcccaatttttgacc 794104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 1955746 - 1955691
Alignment:
Q  247 tttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 302  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||||| | ||||||||    
T  1955746 tttcgtcgtttcagacaaaatttcggcagagaggttactttgaagcacctcatttt 1955691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 18157382 - 18157352
Alignment:
Q  156 agaaacttaaataggggcatctgtcataccc 186  Q
    |||||||||||||||||||||||||||||||    
T  18157382 agaaacttaaataggggcatctgtcataccc 18157352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 20114119 - 20114066
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  20114119 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 20114066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 38247996 - 38248049
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  38247996 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 38248049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 116; Significance: 6e-59; HSPs: 2)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 184 - 355
Target Start/End: Complemental strand, 35413 - 35242
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  | ||||| ||    
T  35413 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaagaggtta 35314  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||||||||||||| |||| |||| || ||| || || |||||||||||||||||||||||    
T  35313 ctttgaagtacctcattttttattccgagtcgggccctcttcgctttttattttctttttatttcagtattt 35242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 66 - 171
Target Start/End: Complemental strand, 28642 - 28536
Alignment:
Q  66 atttcaattggtcaaaa-ttggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaactta 164  Q
    |||||| |||||||||| |||| ||| ||| |||||||||||||||||||| |||||||||||  || |   ||| ||||||||||||||||||||| ||    
T  28642 atttcacttggtcaaaaattggtgtacttagtatttaagtctcttcgacccgttgatttaaaattttcactttttaaaatctccgtgacggagaaacata 28543  T
Q  165 aataggg 171  Q
    |||||||    
T  28542 aataggg 28536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 17 - 278
Target Start/End: Original strand, 258 - 518
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgaccca 116  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| |||||||| |||||||||||||||     
T  258 catcataggcattcataccattatgttcataagcattgcatt-ctcagcatttcaactggtcaaaattggtgtacttaatatt-aagtctcttcgaccct 355  T
Q  117 ttgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc-aaattttgaccacttttctctattcttac 215  Q
    ||| |||||||  |||  ||||| ||| || ||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| || | ||||    
T  356 ttggtttaaaagttttcccctttaaaaccttcgtgacgaagaaacttaaatagggacatctgtcataccctaaattttgaccacttttctttaattttac 455  T
Q  216 ccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagaga 278  Q
     |||||| |||||| ||| |||  ||| ||| | | |||||| |||||||||||||| |||||    
T  456 acattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggcagaga 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 121236 - 121365
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  121236 cccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggtagagaggtta 121335  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    ||||||||||| |||||||| |||| ||||    
T  121336 ctttgaagtaaatcatttttgattccgagt 121365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 11001 - 11171
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||||| ||||||| ||    
T  11001 cccaaattttgaccacttttctctattcttacccattttattcgtattgttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggtta 11100  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||| |||| |||| || | |||| || ||| ||||| |||||||||||||||||||||||    
T  11101 ctttgaagtacctca-ttttgattccgaatcgggccctcttctctctttattttctttttatttcagtattt 11171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 355
Target Start/End: Original strand, 4398 - 4570
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||   ||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||  ||||||| ||    
T  4398 cccaaattttgacattttttctctattcttacccattttattcatatttttaaagtcggtaattttcatcgtttcagacgaaatttcgacagagaggtta 4497  T
Q  284 ctttgaagtaactca-ttttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||| |||||||||| |||| |||| || ||| ||||| |||||||||||||||||||||||    
T  4498 ctttgaagtacctcatttttttattccgagtcgggccctcttctctctttattttctttttatttcagtattt 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 184 - 349
Target Start/End: Original strand, 33043 - 33208
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| | ||||| ||    
T  33043 cccaaattttgaccacttttctctattcttacccattttatacgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaaagaggtta 33142  T
Q  284 ctttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttca 349  Q
    |||| ||||| |||||||||||||| |||| || | || |||  |||| ||||||| |||||||||    
T  33143 ctttaaagtacctcattttttattccgagtcggaccctcttctttctttattttctctttatttca 33208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 176 - 355
Target Start/End: Complemental strand, 995 - 815
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||| |    
T  995 ctgtcataccccaaattttgaccagctttctctattcttacccattttattcgtatttttaaagctgggaattttcgtcgtttcagacgaaatttcggca 896  T
Q  275 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    || ||| ||||||||| || ||||||||| |||| |||| |||| || ||| ||||| ||||||||||||||| |||||||    
T  895 gaaaggttactttgaaatacctcatttttgattccgagtcgggccctcttctctctttattttctttttattttagtattt 815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 94; Significance: 8e-46; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 66 - 278
Target Start/End: Complemental strand, 65714 - 65501
Alignment:
Q  66 atttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaa 165  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| ||||||||||    
T  65714 atttcaattggtcaaaattggtgtacttaatatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaa 65615  T
Q  166 ataggggcatctgtcata-cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacga 264  Q
    |||||||||||||||||| |||||||||||  |||||||||||||| |||| |||||| |||||| ||| |||  ||| ||| | | |||||| ||||||    
T  65614 ataggggcatctgtcataccccaaattttgtacacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacga 65515  T
Q  265 aatttcggtagaga 278  Q
    |||||||| |||||    
T  65514 aatttcggcagaga 65501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 81853 - 81749
Alignment:
Q  175 tctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggt 273  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||||| |||||| ||| |||  ||| ||| | | |||||| ||||||||||| ||     
T  81853 tctgtcataccctaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaattttggc 81754  T
Q  274 agaga 278  Q
    |||||    
T  81753 agaga 81749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 67766 - 67729
Alignment:
Q  17 catcataggcactcatactattatgttcataagcattg 54  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  67766 catcataggcattcataccattatgttcataagcattg 67729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 15821 - 15941
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||| ||    
T  15821 cccaaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggtta 15920  T
Q  284 ctttgaagtaactcatttttt 304  Q
    |||||||||| ||||||||||    
T  15921 ctttgaagtacctcatttttt 15941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 42 - 193
Target Start/End: Complemental strand, 137988 - 137839
Alignment:
Q  42 ttcataagcattgcatttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatcctttta 141  Q
    ||||||||||||||||| || |  ||||||| ||||||||||||| ||| |||||||||||||||||||||||| |||||||||||  |||||  |||||    
T  137988 ttcataagcattgcatt-cttatcatttcaagtggtcaaaattggtgtacttaatatttaagtctcttcgacccgttgatttaaaagttttat-ttttta 137891  T
Q  142 aatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| ||||||    
T  137890 aatctccgtgaaggagaaacttaaataggggcatctatcataccctaatttt 137839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 75 - 233
Target Start/End: Complemental strand, 11072 - 10916
Alignment:
Q  75 ggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggca 174  Q
    |||||||||||| ||| |||||||||||||||||||||||  |||||||||||  ||   | |||||||||||||||||| |||||||||||||||||||    
T  11072 ggtcaaaattggtgtacttaatatttaagtctcttcgacctgttgatttaaaagttt---ctttttaaatctccgtgacgaagaaacttaaataggggca 10976  T
Q  175 tctgtcata-cccaaattttgaccacttttctctattcttacc-cattttattcgtatttt 233  Q
    ||||||||| |||||||||||||||||||| |||||| |||||  ||||||||||||||||    
T  10975 tctgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttt 10916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 141 - 12
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||  ||||||||||||||||| || | ||||| ||    
T  141 cccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggtta 42  T
Q  284 ctttgaagtaactcattttttattcggagt 313  Q
    |||||||||| |||||||||||||| ||||    
T  41 ctttgaagtacctcattttttattccgagt 12  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 40890 - 40807
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaat 267  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  40890 cccaaattttgaccacttttctctattcttatccattttattcgtatttttaaagtcgagcattttcatcgtttcagacgaaat 40807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 177 - 302
Target Start/End: Complemental strand, 7255 - 7129
Alignment:
Q  177 tgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtag 275  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||||| ||| ||| |||| || |||||||| | ||||||||||||||||||| ||    
T  7255 tgtcataccctaaattttgaccacttttctctgtttttacccattttatttgtacttttaaagccgagaattttcgttgtttcagacgaaatttcgggag 7156  T
Q  276 agaggatactttgaagtaactcatttt 302  Q
      ||| |||||||||||| ||||||||    
T  7155 gaaggttactttgaagtacctcatttt 7129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0545 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0545
Description:

Target: scaffold0545; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 58 - 198
Target Start/End: Complemental strand, 10175 - 10035
Alignment:
Q  58 ttctcagtatttcaattggtcaaaattggcgtatttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggag 157  Q
    |||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||  |  ||| || ||   | | |||| | ||| |||||    
T  10175 ttcttagtatttcaattggtcaaatttagcgtatttaatatttaagtctcttcgacccatgga-ctccaaagttgatatctgtgaatccctgtggcggag 10077  T
Q  158 aaacttaaataggggcatctgtcataccc-aaattttgacca 198  Q
    ||||||||||||||||||||||||||||| ||| ||||||||    
T  10076 aaacttaaataggggcatctgtcataccctaaaatttgacca 10035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 147 - 264
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||| | | ||||||| |  |||||||||||||||||    ||||  ||    
T  147 cccaaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacgaagagttta 246  T
Q  284 ctttgaagtaactcattt 301  Q
    |||||||||| |||||||    
T  247 ctttgaagtacctcattt 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 20539 - 20422
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggata 283  Q
    |||||||||||||||||||||| |  | |||| |||||| |||||| ||| |||| || |||||||| | ||||||||||||||||||| ||||||| ||    
T  20539 cccaaattttgaccacttttctatggttttacacattttgttcgtacttttaaagccgagaattttcgttgtttcagacgaaatttcggcagagaggtta 20440  T
Q  284 ctttgaagtaactcattt 301  Q
    ||||| |||| |||||||    
T  20439 ctttggagtacctcattt 20422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 15044 - 15160
Alignment:
Q  78 caaaattggcgtattta-atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatc 176  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||| ||  || ||| ||| ||  |||||| |||||||||||||||||||||    
T  15044 caaaattggcgtttttatatatttaagtctctccgaccctttggtttaaaaagttc-tcttttaaaacctttgtgacgaagaaacttaaataggggcatc 15142  T
Q  177 tgtcatacccaaattttg 194  Q
    |||||||||| |||||||    
T  15143 tgtcataccccaattttg 15160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 10539 - 10630
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  10539 atatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccc 10630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 61158 - 61268
Alignment:
Q  78 caaaattggcgt--atttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcat 175  Q
    ||||||||||||  |||| ||||||||||||||||||||| ||| |||||||  |||  | ||| ||| || | ||||| ||||||||||||||||||||    
T  61158 caaaattggcgtttattttatatttaagtctcttcgaccctttggtttaaaagttttcccttttaaaaccttcatgacgaagaaacttaaataggggcat 61257  T
Q  176 ctgtcataccc 186  Q
    |||||||||||    
T  61258 ctgtcataccc 61268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 278
Target Start/End: Complemental strand, 438 - 335
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggta 274  Q
    ||||||||||| ||||||||||||||||||| |||| |||| |||||| |||||| ||| |||  ||| ||| | |||||||| |||||||||||||| |    
T  438 ctgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaaaccggaaatgtccatcgttttagacgaaatttcggca 339  T
Q  275 gaga 278  Q
    ||||    
T  338 gaga 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 430 - 345
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaattt 269  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||| ||| |||  ||| ||| | |||||||| |||||||||||    
T  430 cccaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccatcgttttagacgaaattt 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 8538 - 8422
Alignment:
Q  75 ggtcaaaattggcgta-tttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggc 173  Q
    |||||||||||| ||| |||  |||||||||||||||||||||| || | ||| | || |||  || ||||||| | |||| ||||||||||||||||||    
T  8538 ggtcaaaattggtgtacttttgtatttaagtctcttcgacccatcgaatcaaagatttcatc--ttcaaatctctg-gacgaagaaacttaaataggggc 8442  T
Q  174 atctgtcatacccaaatttt 193  Q
    ||||||||||||| ||||||    
T  8441 atctgtcataccccaatttt 8422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1380 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1380
Description:

Target: scaffold1380; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 238 - 341
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcatac-ccaaatttt 193  Q
    ||||||||||||| |||||||  || |||||||  |||  | ||| ||| || ||||||| ||||||||||||||||||||||||||||| ||||||||     
T  238 atatttaagtctcctcgaccctgtggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcatacaccaaatttg 337  T
Q  194 gacc 197  Q
    ||||    
T  338 gacc 341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 80815 - 80906
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||| |||||||  || |||||||  |||  | ||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  80815 atatttaagtctcctcgaccctgtggtttaaaagttttcccttttaaaaccttcgtgacgaagaaacttaaataggggcatctgtcataccc 80906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 59736 - 59789
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  59736 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 59789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1487 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 800 - 762
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccatttt 222  Q
    |||||||||||||||||||||||||||||||||||||||    
T  800 cccaaattttgaccacttttctctattcttacccatttt 762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 7686 - 7648
Alignment:
Q  184 cccaaattttgaccacttttctctattcttacccatttt 222  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7686 cccaaattttgaccacttttctctattcttacccatttt 7648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 349
Target Start/End: Complemental strand, 7621 - 7547
Alignment:
Q  275 gagaggatactttgaagtaactcattttttattcggagttgggctctgttccctcttcattttctttttatttca 349  Q
    |||||| |||||||||||| ||||||||||||||  ||| |  |||| ||| ||||| ||||||| |||||||||    
T  7621 gagaggttactttgaagtacctcattttttattcctagtcgaactctcttctctctttattttctctttatttca 7547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 15837 - 15760
Alignment:
Q  225 tcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 302  Q
    |||| |||| |||| | ||||||||| ||| ||||||||||||| ||||||| ||| |||||||||||| ||||||||    
T  15837 tcgtctttttaaagccaggaattttcgtcgcttcagacgaaattacggtagataggttactttgaagtacctcatttt 15760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 5206 - 5090
Alignment:
Q  75 ggtcaaaattggcgta-tttaatatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggc 173  Q
    |||||||||||| ||| |||  |||||||||| ||||||||||| || | ||| | || |||  || ||||||| | |||| ||||||||||||||||||    
T  5206 ggtcaaaattggtgtacttttgtatttaagtcccttcgacccatcgaatcaaagatttcatc--ttcaaatctctg-gacgaagaaacttaaataggggc 5110  T
Q  174 atctgtcatacccaaatttt 193  Q
    ||||||||||||| ||||||    
T  5109 atctgtcataccccaatttt 5090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 65701 - 65589
Alignment:
Q  244 aattttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttttt-attcggagttgggctctgttccctcttcattttctttt 342  Q
    ||||||| | ||||| ||||||||||||  | ||| | |||||||||||| |||||||||| |||| |||| || | || ||| ||||| ||||| ||||    
T  65701 aattttcgttgtttcggacgaaatttcgacaaagatgttactttgaagtacctcatttttttattccgagtcggacccttttctctctttattttatttt 65602  T
Q  343 tatttcagtattt 355  Q
    |||||||||||||    
T  65601 tatttcagtattt 65589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 192527 - 192622
Alignment:
Q  176 ctgtcataccc-aaattttgaccacttttctctattcttacccattttattcgtattttcaaagtcgggaattttcatcgtttcagacgaaatttc 270  Q
    ||||||||||| |||||||||||||||||||||||| ||||  ||||| |||||| ||| |||  ||| ||| | | |||||| ||||||||||||    
T  192527 ctgtcataccccaaattttgaccacttttctctatttttacagattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttc 192622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2005
Description:

Target: scaffold2005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 1126 - 1168
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  1126 agaaacttaaataggggcatctgtcataccccaaattttgacc 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1721 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1721
Description:

Target: scaffold1721; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 799 - 841
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  799 gacgaagaaacttaaataggggcatctgtcataccccaatttt 841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0755 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0755
Description:

Target: scaffold0755; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 942 - 984
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  942 agaaacttaaataggggcatctgtcataccccaaattttgacc 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 2008 - 1966
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  2008 gacgaagaaacttaaataggggcatctgtcataccccaatttt 1966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 6575 - 6533
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  6575 gacgaagaaacttaaataggggcatctgtcataccccaatttt 6533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 744 - 786
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  744 gacgaagaaacttaaataggggcatctgtcataccccaatttt 786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 30791 - 30749
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  30791 gacgaagaaacttaaataggggcatctgtcataccccaatttt 30749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 33932 - 33974
Alignment:
Q  156 agaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  33932 agaaacttaaataggggcatctgtcataccccaaattttgacc 33974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 3740 - 3782
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  3740 gacgaagaaacttaaataggggcatctgtcataccccaatttt 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0721 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 2979 - 2942
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  2979 agaaacttaaataggggcatctgtcataccccaatttt 2942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 470 - 414
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcata-cccaaattttgacc 197  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  470 aaatctccg-gacgaagaaacttaaataggggcatctgtcatatcccaatttttgacc 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 12922 - 12959
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  12922 agaaacttaaataggggcatctgtcataccccaatttt 12959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 16130 - 16093
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  16130 agaaacttaaataggggcatctgtcataccccaatttt 16093  T

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Target: scaffold0278; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 19464 - 19427
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  19464 agaaacttaaataggggcatctgtcataccccaatttt 19427  T

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Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 17859 - 17822
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  17859 agaaacttaaataggggcatctgtcataccccaatttt 17822  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 483 - 534
Alignment:
Q  141 aaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||| ||||||    
T  483 aaatctccg-gacgaagaaacttaaataggggcatctgccataccccaatttt 534  T

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Target: scaffold0315 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 10651 - 10595
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcatttt 302  Q
    ||||| ||| ||||||||||||||||| | ||||| |||||||||||| ||||||||    
T  10651 ttttcgtcgcttcagacgaaatttcggcaaagaggttactttgaagtacctcatttt 10595  T

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Target: scaffold0315; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 185
Target Start/End: Complemental strand, 10731 - 10702
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacc 185  Q
    ||||||||||||||||||||||||||||||    
T  10731 agaaacttaaataggggcatctgtcatacc 10702  T

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Target: scaffold1068 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 2918 - 3009
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcataccc 186  Q
    ||||||||||||| |||||||  || |||||||  | |  | ||| ||| || ||||||| |||||| ||||||||||||||||||||||||    
T  2918 atatttaagtctcctcgaccctgtggtttaaaagttctcccttttaaaaccttcgtgacgaagaaacataaataggggcatctgtcataccc 3009  T

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Target: scaffold0799 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0799
Description:

Target: scaffold0799; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 1979 - 2014
Alignment:
Q  158 aaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||| ||||||    
T  1979 aaacttaaataggggcatctgtcataccccaatttt 2014  T

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Target: scaffold0243 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 20713 - 20808
Alignment:
Q  95 atatttaagtctcttcgacccattgatttaaaaactttatccttttaaatctccgtgacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||| ||||| || | ||| | || |||  || ||||||| | |||| ||||||||||||||||| ||||||||||||| ||||||    
T  20713 atatttaagtctcttcggcccatcgaatcaaagatttcatc--ttcaaatctctg-gacgaagaaacttaaataggggaatctgtcataccccaatttt 20808  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 304466 - 304501
Alignment:
Q  158 aaacttaaataggggcatctgtcatacccaaatttt 193  Q
    ||||||||||||||||||||||||||||| ||||||    
T  304466 aaacttaaataggggcatctgtcataccccaatttt 304501  T

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Target: scaffold0605 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 9429 - 9387
Alignment:
Q  151 gacggagaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||    
T  9429 gacgaagaaacttaaaaaggggcatctgtcataccccaatttt 9387  T

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Target: scaffold0455 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 6109 - 6056
Alignment:
Q  246 ttttcatcgtttcagacgaaatttcggtagagaggatactttgaagtaactcat 299  Q
    |||| ||| |||||||| ||||||||| || ||||||||||||||||| |||||    
T  6109 ttttaatcatttcagacaaaatttcggcagggaggatactttgaagtacctcat 6056  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 163406 - 163443
Alignment:
Q  156 agaaacttaaataggggcatctgtcatacccaaatttt 193  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  163406 agaaacttaaataggggcatttgtcataccccaatttt 163443  T

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Target: scaffold0323 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 17669 - 17613
Alignment:
Q  299 ttttttattcggagttgggctctgttccctcttcattttctttttatttcagtattt 355  Q
    |||||||||| |||| |||| || ||| ||||| ||||||||||||||||| |||||    
T  17669 ttttttattccgagtcgggccctcttctctctttattttctttttatttcattattt 17613  T

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