View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261A_low_88 (Length: 350)
Name: NF10261A_low_88
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261A_low_88 |
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Alignment Details
Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 23 - 332
Target Start/End: Complemental strand, 10885580 - 10885271
Alignment:
| Q |
23 |
tataggtcacatttcagcttgtgtttcattctctaaggttgctgtgtctttcacacatgttattaaatcagcagaacctgttttttctgtcatattttct |
122 |
Q |
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| T |
10885580 |
tataggtcacatttcagcttgtgtttcgttctctaaggttgctgtgtctttcacacatgttattaaatcagcagaacctgttttttctgtcatattttct |
10885481 |
T |
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| Q |
123 |
tctgttcttggtgataggtatccaattcaggtttggctttcaattttaccaattgtgcttggttgttctttagctgctgttactgaggtatctttcaatg |
222 |
Q |
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| T |
10885480 |
tctgttcttggtgataggtatccaattcaggtttggctttcaattttaccaattgtgcttggttgttctttagctgctgttactgaggtatctttcaatg |
10885381 |
T |
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| Q |
223 |
ttggaggattgtggtgtgctctgattagcaatgttggttttgtgttgaggaacatttattcgnnnnnnngtttacaaaatttcaaagaagttgatggttt |
322 |
Q |
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| T |
10885380 |
ttggaggattgtggtgtgctctgattagcaatgttggttttgtgttgaggaacatttattcgaaaaaaagtttacaaaatttcaaagaagttgatggttt |
10885281 |
T |
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| Q |
323 |
gaacttatat |
332 |
Q |
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| T |
10885280 |
gaacttatat |
10885271 |
T |
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