View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10261A_low_90 (Length: 349)

Name: NF10261A_low_90
Description: NF10261A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10261A_low_90
NF10261A_low_90
[»] chr8 (29 HSPs)
chr8 (267-349)||(21974142-21974224)
chr8 (267-349)||(21978252-21978334)
chr8 (267-349)||(43250240-43250322)
chr8 (269-349)||(14399053-14399133)
chr8 (269-349)||(21409939-21410019)
chr8 (269-349)||(21804431-21804511)
chr8 (266-349)||(23913303-23913384)
chr8 (266-349)||(44385793-44385874)
chr8 (265-349)||(21386197-21386279)
chr8 (266-349)||(23427864-23427945)
chr8 (267-349)||(21829430-21829501)
chr8 (267-349)||(22110639-22110710)
chr8 (269-349)||(18864076-18864145)
chr8 (269-349)||(30941536-30941605)
chr8 (8-52)||(18863811-18863856)
chr8 (8-52)||(30941271-30941316)
chr8 (10-53)||(21973689-21973733)
chr8 (10-53)||(21977780-21977824)
chr8 (10-53)||(22110965-22111009)
chr8 (10-53)||(43250725-43250769)
chr8 (10-52)||(21829139-21829182)
chr8 (309-349)||(21328604-21328644)
chr8 (299-349)||(27942675-27942726)
chr8 (308-349)||(21967992-21968033)
chr8 (308-349)||(21980832-21980873)
chr8 (308-349)||(21985815-21985856)
chr8 (308-349)||(22000778-22000819)
chr8 (308-349)||(22009196-22009237)
chr8 (308-349)||(34950124-34950165)
[»] chr7 (52 HSPs)
chr7 (267-349)||(31763-31845)
chr7 (267-349)||(12706081-12706163)
chr7 (267-349)||(12713578-12713660)
chr7 (267-349)||(12722236-12722318)
chr7 (267-349)||(16908468-16908550)
chr7 (267-345)||(12717329-12717407)
chr7 (267-349)||(18278032-18278114)
chr7 (267-349)||(18281996-18282078)
chr7 (269-349)||(2833442-2833522)
chr7 (269-349)||(15083264-15083344)
chr7 (269-349)||(39721234-39721314)
chr7 (269-349)||(2531293-2531373)
chr7 (269-349)||(7520176-7520256)
chr7 (266-349)||(20486780-20486861)
chr7 (266-349)||(25928330-25928412)
chr7 (266-349)||(10607280-10607361)
chr7 (265-349)||(18301389-18301471)
chr7 (266-349)||(16582459-16582540)
chr7 (290-349)||(26291195-26291254)
chr7 (265-345)||(9752466-9752544)
chr7 (265-349)||(1859979-1860062)
chr7 (265-349)||(13919370-13919453)
chr7 (296-349)||(39268301-39268354)
chr7 (267-309)||(72341-72383)
chr7 (267-309)||(76450-76492)
chr7 (299-349)||(11660320-11660370)
chr7 (299-349)||(13891668-13891718)
chr7 (303-349)||(13892051-13892097)
chr7 (269-349)||(45171472-45171541)
chr7 (8-52)||(45171207-45171252)
chr7 (10-53)||(32023-32067)
chr7 (10-53)||(12713838-12713882)
chr7 (10-53)||(12717662-12717706)
chr7 (10-53)||(12722573-12722617)
chr7 (10-53)||(18278357-18278401)
chr7 (10-53)||(18282320-18282364)
chr7 (301-349)||(18424273-18424321)
chr7 (10-52)||(71970-72013)
chr7 (10-52)||(76079-76122)
chr7 (299-349)||(14420825-14420875)
chr7 (299-349)||(16005042-16005092)
chr7 (299-349)||(18606376-18606426)
chr7 (299-349)||(18871335-18871385)
chr7 (313-349)||(72376-72412)
chr7 (313-349)||(76485-76521)
chr7 (299-349)||(838123-838174)
chr7 (299-349)||(1203303-1203354)
chr7 (299-349)||(16109965-16110016)
chr7 (299-349)||(146538-146588)
chr7 (299-349)||(10897887-10897937)
chr7 (308-349)||(16185562-16185603)
chr7 (309-349)||(15213086-15213126)
[»] chr6 (43 HSPs)
chr6 (267-349)||(8242450-8242532)
chr6 (267-349)||(11565439-11565521)
chr6 (267-349)||(12620292-12620374)
chr6 (267-349)||(23988341-23988423)
chr6 (267-345)||(22861797-22861875)
chr6 (266-349)||(11716898-11716981)
chr6 (269-349)||(27555577-27555657)
chr6 (269-349)||(22075347-22075431)
chr6 (266-349)||(2076324-2076405)
chr6 (265-349)||(18918539-18918621)
chr6 (290-349)||(23400716-23400775)
chr6 (265-349)||(14470919-14471001)
chr6 (267-349)||(22947705-22947776)
chr6 (267-349)||(22951661-22951732)
chr6 (267-349)||(23870149-23870220)
chr6 (267-349)||(23874105-23874176)
chr6 (290-349)||(18953465-18953524)
chr6 (265-318)||(1643321-1643372)
chr6 (267-309)||(16758782-16758824)
chr6 (269-349)||(19869225-19869294)
chr6 (269-349)||(23393679-23393748)
chr6 (269-349)||(23413587-23413656)
chr6 (8-52)||(19869514-19869559)
chr6 (8-52)||(23393968-23394013)
chr6 (8-52)||(23413876-23413921)
chr6 (10-53)||(8242788-8242832)
chr6 (10-53)||(11565776-11565820)
chr6 (10-53)||(12619990-12620034)
chr6 (10-53)||(23988874-23988918)
chr6 (10-52)||(16759152-16759195)
chr6 (11-53)||(22948031-22948074)
chr6 (11-53)||(22951987-22952030)
chr6 (11-53)||(23870475-23870518)
chr6 (11-53)||(23874431-23874474)
chr6 (299-349)||(23538019-23538069)
chr6 (299-349)||(27222870-27222920)
chr6 (5-52)||(14471255-14471303)
chr6 (301-349)||(16622873-16622921)
chr6 (301-349)||(31479455-31479503)
chr6 (299-349)||(12941259-12941309)
chr6 (309-349)||(25737930-25737970)
chr6 (321-349)||(27416540-27416568)
chr6 (309-345)||(34297773-34297809)
[»] chr5 (36 HSPs)
chr5 (267-349)||(19474131-19474213)
chr5 (267-349)||(20294552-20294634)
chr5 (269-349)||(18354835-18354915)
chr5 (276-349)||(24768530-24768603)
chr5 (265-349)||(20912211-20912293)
chr5 (265-349)||(15238076-15238158)
chr5 (266-349)||(22108409-22108490)
chr5 (265-349)||(40727358-40727440)
chr5 (266-349)||(22120551-22120632)
chr5 (269-349)||(11219593-11219662)
chr5 (269-349)||(11224179-11224248)
chr5 (269-349)||(11226195-11226264)
chr5 (269-349)||(11228001-11228070)
chr5 (269-349)||(11229991-11230060)
chr5 (8-53)||(19473830-19473876)
chr5 (8-52)||(11219882-11219927)
chr5 (8-52)||(11224468-11224513)
chr5 (8-52)||(11226448-11226493)
chr5 (8-52)||(11230280-11230325)
chr5 (8-52)||(18355189-18355234)
chr5 (301-349)||(10751855-10751903)
chr5 (10-53)||(20294815-20294859)
chr5 (10-52)||(40727069-40727112)
chr5 (299-349)||(19510500-19510550)
chr5 (299-349)||(22339050-22339100)
chr5 (299-349)||(23113393-23113443)
chr5 (299-349)||(28372072-28372122)
chr5 (299-349)||(37599999-37600049)
chr5 (299-349)||(38146409-38146459)
chr5 (299-349)||(41878642-41878692)
chr5 (14-52)||(11228290-11228329)
chr5 (299-349)||(22335520-22335570)
chr5 (299-349)||(22749199-22749249)
chr5 (313-349)||(9774978-9775014)
chr5 (309-349)||(36459586-36459626)
chr5 (302-338)||(39362991-39363027)
[»] chr4 (37 HSPs)
chr4 (267-349)||(9555107-9555189)
chr4 (267-349)||(14758950-14759032)
chr4 (267-349)||(14955718-14955800)
chr4 (267-349)||(17807092-17807174)
chr4 (267-349)||(25688480-25688562)
chr4 (267-349)||(4562732-4562814)
chr4 (267-349)||(5758414-5758496)
chr4 (267-349)||(33740874-33740956)
chr4 (269-349)||(20158408-20158488)
chr4 (269-349)||(20163859-20163939)
chr4 (269-347)||(20161084-20161162)
chr4 (267-349)||(12486309-12486388)
chr4 (265-349)||(23996925-23997007)
chr4 (269-349)||(10711863-10711943)
chr4 (269-349)||(10925633-10925713)
chr4 (266-349)||(12422981-12423062)
chr4 (266-349)||(17052405-17052486)
chr4 (265-349)||(631706-631788)
chr4 (265-349)||(22634885-22634967)
chr4 (265-349)||(27532790-27532872)
chr4 (296-349)||(13813820-13813873)
chr4 (296-349)||(13818308-13818361)
chr4 (299-349)||(24048375-24048425)
chr4 (8-52)||(12486570-12486615)
chr4 (10-53)||(4562433-4562477)
chr4 (10-53)||(9555444-9555488)
chr4 (10-53)||(14758574-14758618)
chr4 (10-53)||(14955339-14955383)
chr4 (301-349)||(15223584-15223632)
chr4 (10-53)||(33741214-33741258)
chr4 (10-52)||(5757958-5758001)
chr4 (11-53)||(25688817-25688860)
chr4 (299-349)||(15533257-15533307)
chr4 (299-349)||(18211642-18211692)
chr4 (299-349)||(49549073-49549123)
chr4 (299-349)||(30145821-30145872)
chr4 (299-349)||(36036990-36037040)
[»] chr3 (69 HSPs)
chr3 (267-349)||(7108276-7108358)
chr3 (267-349)||(7112211-7112293)
chr3 (267-349)||(11068651-11068733)
chr3 (267-349)||(22320167-22320249)
chr3 (267-349)||(22335222-22335304)
chr3 (267-349)||(55021414-55021496)
chr3 (267-349)||(11167052-11167134)
chr3 (267-349)||(14497985-14498067)
chr3 (267-349)||(28948499-28948581)
chr3 (269-349)||(5219885-5219965)
chr3 (269-349)||(11853744-11853824)
chr3 (269-349)||(37440641-37440721)
chr3 (267-346)||(15616218-15616297)
chr3 (269-349)||(11301626-11301706)
chr3 (269-349)||(14664463-14664543)
chr3 (269-349)||(14667627-14667707)
chr3 (266-349)||(16795541-16795622)
chr3 (268-349)||(12853325-12853404)
chr3 (290-349)||(18933337-18933396)
chr3 (290-349)||(30064423-30064482)
chr3 (265-349)||(4590119-4590201)
chr3 (266-349)||(14670064-14670142)
chr3 (265-349)||(15463916-15463999)
chr3 (265-349)||(14068021-14068103)
chr3 (265-349)||(17318468-17318550)
chr3 (293-349)||(12337294-12337348)
chr3 (267-309)||(4112607-4112649)
chr3 (268-309)||(4108759-4108800)
chr3 (302-349)||(10834935-10834982)
chr3 (266-349)||(14681588-14681664)
chr3 (8-53)||(11069065-11069111)
chr3 (299-349)||(13435856-13435906)
chr3 (299-348)||(8928858-8928907)
chr3 (8-52)||(15963824-15963869)
chr3 (8-52)||(15967748-15967793)
chr3 (8-52)||(15971672-15971717)
chr3 (5-52)||(4108382-4108430)
chr3 (5-52)||(4112234-4112282)
chr3 (10-53)||(7108613-7108657)
chr3 (10-53)||(7112548-7112592)
chr3 (10-53)||(11166676-11166720)
chr3 (10-53)||(14498322-14498366)
chr3 (10-53)||(15616552-15616596)
chr3 (269-309)||(15963564-15963604)
chr3 (269-309)||(15967488-15967528)
chr3 (269-309)||(15971412-15971452)
chr3 (10-53)||(22320581-22320625)
chr3 (10-53)||(22335636-22335680)
chr3 (10-53)||(28948759-28948803)
chr3 (10-53)||(30064764-30064808)
chr3 (10-53)||(55021902-55021946)
chr3 (302-349)||(16751895-16751942)
chr3 (299-349)||(3802008-3802058)
chr3 (8-53)||(14067672-14067718)
chr3 (299-349)||(14764786-14764836)
chr3 (299-349)||(20249840-20249890)
chr3 (299-349)||(29545929-29545979)
chr3 (299-349)||(54519635-54519685)
chr3 (300-349)||(18899491-18899540)
chr3 (309-349)||(11912465-11912505)
chr3 (299-349)||(9532296-9532346)
chr3 (299-349)||(12304212-12304262)
chr3 (299-349)||(23372534-23372584)
chr3 (299-349)||(51299571-51299621)
chr3 (313-349)||(4108793-4108830)
chr3 (313-349)||(4112642-4112679)
chr3 (308-349)||(8491732-8491773)
chr3 (265-312)||(8490350-8490395)
chr3 (301-349)||(19774236-19774284)
[»] chr2 (27 HSPs)
chr2 (267-349)||(24630006-24630088)
chr2 (267-349)||(24645189-24645271)
chr2 (267-349)||(24647965-24648047)
chr2 (267-349)||(27600409-27600491)
chr2 (267-349)||(30346616-30346698)
chr2 (267-349)||(10103255-10103337)
chr2 (267-349)||(12902565-12902647)
chr2 (267-349)||(27380952-27381034)
chr2 (267-349)||(27384922-27385004)
chr2 (269-349)||(31343955-31344035)
chr2 (266-349)||(9784032-9784113)
chr2 (269-349)||(41532414-41532483)
chr2 (8-52)||(41532149-41532194)
chr2 (10-53)||(10102956-10103000)
chr2 (10-53)||(24629627-24629671)
chr2 (10-53)||(27380500-27380544)
chr2 (10-53)||(27384546-27384590)
chr2 (10-53)||(27600746-27600790)
chr2 (10-53)||(30346163-30346207)
chr2 (299-349)||(6481822-6481872)
chr2 (299-349)||(6485289-6485339)
chr2 (299-349)||(19663548-19663598)
chr2 (299-349)||(20260295-20260345)
chr2 (299-349)||(21074498-21074548)
chr2 (315-349)||(24647132-24647166)
chr2 (8-52)||(1282351-1282396)
chr2 (302-349)||(9240712-9240759)
[»] chr1 (21 HSPs)
chr1 (267-349)||(1009300-1009382)
chr1 (267-349)||(1926754-1926836)
chr1 (267-349)||(16376774-16376856)
chr1 (267-349)||(20925768-20925850)
chr1 (267-349)||(52634306-52634388)
chr1 (269-349)||(33796071-33796151)
chr1 (266-349)||(22132058-22132139)
chr1 (265-349)||(21406291-21406373)
chr1 (266-349)||(41801238-41801319)
chr1 (290-349)||(20230120-20230179)
chr1 (10-53)||(1009637-1009681)
chr1 (10-53)||(1926301-1926345)
chr1 (10-53)||(16376552-16376596)
chr1 (10-53)||(20925315-20925359)
chr1 (301-349)||(39245163-39245211)
chr1 (301-349)||(39248718-39248766)
chr1 (301-349)||(41389657-41389705)
chr1 (10-53)||(52634723-52634767)
chr1 (299-349)||(16370963-16371013)
chr1 (8-48)||(33796462-33796503)
chr1 (308-349)||(11809949-11809990)
[»] scaffold0061 (2 HSPs)
scaffold0061 (267-348)||(68514-68595)
scaffold0061 (10-52)||(68328-68371)
[»] scaffold0372 (2 HSPs)
scaffold0372 (267-349)||(6279-6361)
scaffold0372 (10-53)||(6167-6211)
[»] scaffold0028 (1 HSPs)
scaffold0028 (267-349)||(60283-60366)
[»] scaffold0349 (2 HSPs)
scaffold0349 (267-349)||(11089-11170)
scaffold0349 (10-53)||(11431-11475)
[»] scaffold1852 (1 HSPs)
scaffold1852 (269-349)||(781-861)
[»] scaffold0410 (1 HSPs)
scaffold0410 (269-349)||(14882-14962)
[»] scaffold0166 (1 HSPs)
scaffold0166 (276-349)||(11027-11100)
[»] scaffold0486 (1 HSPs)
scaffold0486 (269-349)||(8615-8695)
[»] scaffold0157 (2 HSPs)
scaffold0157 (267-349)||(34089-34168)
scaffold0157 (8-52)||(33862-33907)
[»] scaffold0023 (1 HSPs)
scaffold0023 (269-349)||(11815-11895)
[»] scaffold0293 (1 HSPs)
scaffold0293 (266-349)||(21298-21380)
[»] scaffold0575 (1 HSPs)
scaffold0575 (266-349)||(6920-7001)
[»] scaffold0124 (1 HSPs)
scaffold0124 (265-349)||(25526-25608)
[»] scaffold0380 (2 HSPs)
scaffold0380 (265-349)||(4012-4094)
scaffold0380 (265-308)||(1-42)
[»] scaffold0142 (1 HSPs)
scaffold0142 (266-349)||(8699-8780)
[»] scaffold0013 (1 HSPs)
scaffold0013 (266-349)||(74291-74372)
[»] scaffold0327 (1 HSPs)
scaffold0327 (266-349)||(18861-18942)
[»] scaffold0109 (1 HSPs)
scaffold0109 (290-349)||(37179-37238)
[»] scaffold0029 (2 HSPs)
scaffold0029 (290-349)||(62821-62880)
scaffold0029 (5-53)||(79489-79538)
[»] scaffold0299 (1 HSPs)
scaffold0299 (293-349)||(5863-5917)
[»] scaffold0031 (1 HSPs)
scaffold0031 (266-349)||(37161-37243)
[»] scaffold0080 (2 HSPs)
scaffold0080 (299-349)||(28510-28560)
scaffold0080 (299-349)||(33975-34025)
[»] scaffold0525 (2 HSPs)
scaffold0525 (265-349)||(5489-5571)
scaffold0525 (10-52)||(5006-5049)
[»] scaffold0141 (2 HSPs)
scaffold0141 (269-349)||(15546-15615)
scaffold0141 (8-52)||(15281-15326)
[»] scaffold0200 (1 HSPs)
scaffold0200 (269-309)||(10834-10874)
[»] scaffold1427 (1 HSPs)
scaffold1427 (299-349)||(238-288)
[»] scaffold0842 (1 HSPs)
scaffold0842 (299-349)||(5280-5330)
[»] scaffold0337 (1 HSPs)
scaffold0337 (299-349)||(10812-10862)
[»] scaffold0026 (1 HSPs)
scaffold0026 (299-349)||(109639-109689)
[»] scaffold0012 (1 HSPs)
scaffold0012 (299-349)||(224133-224183)
[»] scaffold1873 (1 HSPs)
scaffold1873 (265-328)||(691-753)
[»] scaffold0599 (1 HSPs)
scaffold0599 (309-349)||(4159-4199)
[»] scaffold0544 (1 HSPs)
scaffold0544 (299-349)||(3507-3557)
[»] scaffold0139 (1 HSPs)
scaffold0139 (308-349)||(23937-23978)
[»] scaffold0001 (1 HSPs)
scaffold0001 (299-336)||(153803-153840)
[»] scaffold0003 (1 HSPs)
scaffold0003 (321-349)||(70793-70821)


Alignment Details
Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 21974142 - 21974224
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21974142 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 21974224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 21978252 - 21978334
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21978252 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 21978334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 43250322 - 43250240
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43250322 gatgattatattgtgttgttttaaagttattaatgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 43250240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 14399053 - 14399133
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14399053 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 14399133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 21410019 - 21409939
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21410019 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 21409939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 21804511 - 21804431
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21804511 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 21804431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 23913384 - 23913303
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  23913384 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctataagttgttaaatgtacttgatga 23913303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 44385793 - 44385874
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  44385793 tgatgattatattgtgttgttt--aagttgttagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 44385874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 21386279 - 21386197
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  21386279 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtacttgatga 21386197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 23427945 - 23427864
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  23427945 tgatgattatattgtgttgtct--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttaatga 23427864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 21829430 - 21829501
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||    
T  21829430 gatgattatattgtgttgttttaaagttattagtg-----------atgatgatatctatgagttgttaagtgtacttgatga 21829501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 22110710 - 22110639
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||| ||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  22110710 gatgattatattatgttgttttaaagttattagtgatga-----------tgatatctatgagttgttaagtgtacttgatga 22110639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 18864076 - 18864145
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||    
T  18864076 tgattacattgtgttgttttaaagttattagtg-----------atgatgatatctatgagttgttaagtgtacttgatga 18864145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 30941536 - 30941605
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||    
T  30941536 tgattacattgtgttgttttaaagttattagtg-----------atgatgatatctatgagttgttaagtgtacttgatga 30941605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 18863811 - 18863856
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  18863811 tatggtgttagtatgtgttgattatattttgataagatgatgaata 18863856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 30941271 - 30941316
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  30941271 tatggtgttagtatgtgttgattatattttgataagatgatgaata 30941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 21973689 - 21973733
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  21973689 tggtgttagtatgtgttgattatattttcataagatgatgaatac 21973733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 21977780 - 21977824
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  21977780 tggtgttagtatgtgttgattatattttcataagatgatgaatac 21977824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 22111009 - 22110965
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  22111009 tggtgttagtatgtgttgattatattttcataagatgatgaatac 22110965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 43250769 - 43250725
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  43250769 tggtgttagtatgtgttgattatattttcataagatgatgaatac 43250725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 21829139 - 21829182
Alignment:
Q  10 tggtgttagtatgtgttgattata-ttttataagatgatgaata 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  21829139 tggtgttagtatgtgttgattatatttttataagatgatgaata 21829182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 21328644 - 21328604
Alignment:
Q  309 ttacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  21328644 ttacatgatgttatctatgagttgttaaatgtacttgatga 21328604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 27942675 - 27942726
Alignment:
Q  299 gtgatgatgattacatgatgatat-ctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  27942675 gtgatgatgattacatgatgttaagctatgagttgttaaatgtacttgatga 27942726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 21967992 - 21968033
Alignment:
Q  308 attacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  21967992 attacatgatgttacctatgagttgttaaatgtacttgatga 21968033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 21980832 - 21980873
Alignment:
Q  308 attacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  21980832 attacatgatgttacctatgagttgttaaatgtacttgatga 21980873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 21985815 - 21985856
Alignment:
Q  308 attacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  21985815 attacatgatgttacctatgagttgttaaatgtacttgatga 21985856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 22000778 - 22000819
Alignment:
Q  308 attacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  22000778 attacatgatgttacctatgagttgttaaatgtacttgatga 22000819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 22009196 - 22009237
Alignment:
Q  308 attacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  22009196 attacatgatgttacctatgagttgttaaatgtacttgatga 22009237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 34950165 - 34950124
Alignment:
Q  308 attacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  34950165 attacatgatgttacctatgagttgttaaatgtacttgatga 34950124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 31845 - 31763
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31845 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 31763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 12706081 - 12706163
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12706081 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 12706163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 12713660 - 12713578
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12713660 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 12713578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 12722318 - 12722236
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12722318 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 12722236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 16908468 - 16908550
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16908468 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 16908550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 345
Target Start/End: Complemental strand, 12717407 - 12717329
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttg 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12717407 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttg 12717329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 18278114 - 18278032
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18278114 gatgattatattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtacttgatga 18278032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 18282078 - 18281996
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18282078 gatgattatattgtgttgttttaaagtttttagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 18281996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 2833442 - 2833522
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2833442 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 2833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 15083344 - 15083264
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15083344 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 15083264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 39721314 - 39721234
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39721314 tgattacattgtgttgttttaaagttattagtaatgatgattacatgatgatatctatgagttgttaaatgtacttgatga 39721234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 2531293 - 2531373
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||    
T  2531293 tgattacattgtgttgttttaaagttattagtgatgatgattatatgaagatatctatgagttgttaggtgtacttgatga 2531373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 7520176 - 7520256
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  7520176 tgattacattgtgttgttttaaagttatcagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 7520256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 20486861 - 20486780
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  20486861 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 20486780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 25928330 - 25928412
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  25928330 tgatgattatattgtgttgttt-aaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtactttatga 25928412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 10607280 - 10607361
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  10607280 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 10607361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 18301471 - 18301389
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  18301471 gtgacgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtacttgatga 18301389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 16582540 - 16582459
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  16582540 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatttatgagttgttaaatgtacttgatga 16582459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 349
Target Start/End: Complemental strand, 26291254 - 26291195
Alignment:
Q  290 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26291254 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtacttgatga 26291195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 9752466 - 9752544
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttg 345  Q
    |||||||| ||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  9752466 gtgatgatcatattgtgttgttt--aagttattagtgatgataattacatgatgttatctatgagttgttaaatgtacttg 9752544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 1859979 - 1860062
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgat-gatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||| |||| ||| ||||||||||||| ||||||||||||    
T  1859979 gtgatgattatattgtgttgttt--aagttattagtgattgatgattacaggatgttatatatgagttgttaaatgtacttgatga 1860062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 13919370 - 13919453
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgat-gatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||| |||| ||| ||||||||||||| ||||||||||||    
T  13919370 gtgatgattatattgtgttgttt--aagttattagtgattgatgattacaggatgttatatatgagttgttaaatgtacttgatga 13919453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 39268301 - 39268354
Alignment:
Q  296 ttagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  39268301 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 39268354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 72341 - 72383
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgat 309  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  72341 gatgattatattgtgttgttttaaagttattagtgatgatgat 72383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 76450 - 76492
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgat 309  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  76450 gatgattatattgtgttgttttaaagttattagtgatgatgat 76492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 11660370 - 11660320
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  11660370 gtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 11660320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 13891718 - 13891668
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  13891718 gtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 13891668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 13892097 - 13892051
Alignment:
Q  303 tgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  13892097 tgatgattacatgatgttatctatgagttgttaaatgtacttgatga 13892051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 45171472 - 45171541
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||    
T  45171472 tgattacattgtgttgttttaaagttattagtg-----------atgatgatatctatgagttgttaagtgtacttgatga 45171541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 45171207 - 45171252
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  45171207 tatggtgttagtatgtgttgattatattttgataagatgatgaata 45171252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 32067 - 32023
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  32067 tggtgttagtatgtgttgattatattttcataagatgatgaatac 32023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 12713882 - 12713838
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  12713882 tggtgttagtatgtgttgattatattttcataagatgatgaatac 12713838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 12717706 - 12717662
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  12717706 tggtgttagtatgtgttgattatattttcataagatgatgaatac 12717662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 12722617 - 12722573
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  12722617 tggtgttagtatgtgttgattatattttcataagatgatgaatac 12722573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 18278401 - 18278357
Alignment:
Q  10 tggtgttagtatgtgttgattatattt-tataagatgatgaatac 53  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  18278401 tggtgttagtatgtgttgattatatttatataagatgatgaatac 18278357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 18282364 - 18282320
Alignment:
Q  10 tggtgttagtatgtgttgattatattt-tataagatgatgaatac 53  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  18282364 tggtgttagtatgtgttgattatatttatataagatgatgaatac 18282320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 18424321 - 18424273
Alignment:
Q  301 gatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  18424321 gatgatgattacatgatattatctatgagttgttaaatgtacttgatga 18424273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 71970 - 72013
Alignment:
Q  10 tggtgttagtatgtgttgattata-ttttataagatgatgaata 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  71970 tggtgttagtatgtgttgattatatttttataagatgatgaata 72013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 76079 - 76122
Alignment:
Q  10 tggtgttagtatgtgttgattata-ttttataagatgatgaata 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  76079 tggtgttagtatgtgttgattatatttttataagatgatgaata 76122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 14420875 - 14420825
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  14420875 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 14420825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 16005092 - 16005042
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  16005092 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 16005042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 18606426 - 18606376
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  18606426 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 18606376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 18871385 - 18871335
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  18871385 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 18871335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 72376 - 72412
Alignment:
Q  313 atgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||| ||||||||||||||||||||    
T  72376 atgatgatatctatgaattgttaagtgtacttgatga 72412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 76485 - 76521
Alignment:
Q  313 atgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||| ||||||||||||||||||||    
T  76485 atgatgatatctatgaattgttaagtgtacttgatga 76521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 838123 - 838174
Alignment:
Q  299 gtgatgatgattacatgatgatat-ctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  838123 gtgatgatgattacatgatgttaagctatgagttgttaaatgtacttgatga 838174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 1203303 - 1203354
Alignment:
Q  299 gtgatgatgattacatgatgatat-ctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  1203303 gtgatgatgattacatgatgttaagctatgagttgttaaatgtacttgatga 1203354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 16109965 - 16110016
Alignment:
Q  299 gtgatgatgattacatgatgatat-ctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  16109965 gtgatgatgattacatgatgttaagctatgagttgttaaatgtacttgatga 16110016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 146588 - 146538
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||   |||| ||||||||||||||||| ||||||||||||    
T  146588 gtgatgatgattatgcgatgttatctatgagttgttaaatgtacttgatga 146538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 10897887 - 10897937
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||| ||||| ||||||||||||    
T  10897887 gtgatgatgattatgtgatgttatctatgagtcgttaaatgtacttgatga 10897937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 16185603 - 16185562
Alignment:
Q  308 attacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  16185603 attacatgatgttacctatgagttgttaaatgtacttgatga 16185562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 15213126 - 15213086
Alignment:
Q  309 ttacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||| |||| |||||||||||| ||||||||||||    
T  15213126 ttacatgatgttatccatgagttgttaaatgtacttgatga 15213086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 8242532 - 8242450
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8242532 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 8242450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 11565521 - 11565439
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11565521 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 11565439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 12620292 - 12620374
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12620292 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 12620374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 23988423 - 23988341
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23988423 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 23988341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 345
Target Start/End: Complemental strand, 22861875 - 22861797
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttg 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22861875 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttg 22861797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 11716898 - 11716981
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11716898 tgatgtttatattgtgttgttttaaagttattaatgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 11716981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 27555657 - 27555577
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27555657 tgattacattgagttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 27555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 22075347 - 22075431
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatg----atatctatgagttgttaagtgtacttgatga 349  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||    
T  22075347 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatatatctatgagttgttaagtgtacttgatga 22075431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 2076405 - 2076324
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||    
T  2076405 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtatttgatga 2076324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 18918539 - 18918621
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||| | ||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  18918539 gtgatgattatattgtatagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtacttgatga 18918621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 290 - 349
Target Start/End: Complemental strand, 23400775 - 23400716
Alignment:
Q  290 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  23400775 aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 23400716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 14471001 - 14470919
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| ||||  |||||||||||||||| ||||| |||| ||||| |||||||||||| |||||||||||||    
T  14471001 gtgatgattatattgtgtagttt--aagttattagtgatgaagattatatgaagatatttatgagttgttaggtgtacttgatga 14470919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 22947776 - 22947705
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  22947776 gatgattatattgtgttgttttaaagttattagtgatga-----------tgatatctatgagttgttaagtgtacttgatga 22947705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 22951732 - 22951661
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  22951732 gatgattatattgtgttgttttaaagttattagtgatga-----------tgatatctatgagttgttaagtgtacttgatga 22951661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 23870220 - 23870149
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  23870220 gatgattatattgtgttgttttaaagttattagtgatga-----------tgatatctatgagttgttaagtgtacttgatga 23870149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 23874176 - 23874105
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  23874176 gatgattatattgtgttgttttaaagttattagtgatga-----------tgatatctatgagttgttaagtgtacttgatga 23874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 18953465 - 18953524
Alignment:
Q  290 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||    
T  18953465 aagttattagtgatgatgattacatgatgtcatctaggagttgttaaatgtacttgatga 18953524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 1643372 - 1643321
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatg 318  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  1643372 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatg 1643321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 16758824 - 16758782
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgat 309  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  16758824 gatgattatattgtgttgttttaaatttattagtgatgatgat 16758782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 19869294 - 19869225
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  19869294 tgattacattgtgttgttttaaagttattagtgatgatgat-----------atctatgagttgttaagtgtacttgatga 19869225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 23393748 - 23393679
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  23393748 tgattacattgtgttgttttaaagttattagtgatgatgat-----------atctatgagttgttaagtgtacttgatga 23393679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 23413656 - 23413587
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  23413656 tgattacattgtgttgttttaaagttattagtgatgatgat-----------atctatgagttgttaagtgtacttgatga 23413587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 19869559 - 19869514
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  19869559 tatggtgttagtatgtgttgattatattttgataagatgatgaata 19869514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 23394013 - 23393968
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  23394013 tatggtgttagtatgtgttgattatattttgataagatgatgaata 23393968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 23413921 - 23413876
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  23413921 tatggtgttagtatgtgttgattatattttgataagatgatgaata 23413876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 8242832 - 8242788
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  8242832 tggtgttagtatgtgttgattatattttcataagatgatgaatac 8242788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 11565820 - 11565776
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  11565820 tggtgttagtatgtgttgattatattttcataagatgatgaatac 11565776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 12619990 - 12620034
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  12619990 tggtgttagtatgtgttgattatattttcataagatgatgaatac 12620034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 23988918 - 23988874
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  23988918 tggtgttagtatgtgttgattatattttcataagatgatgaatac 23988874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 16759195 - 16759152
Alignment:
Q  10 tggtgttagtatgtgttgattata-ttttataagatgatgaata 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  16759195 tggtgttagtatgtgttgattatatttttataagatgatgaata 16759152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 22948074 - 22948031
Alignment:
Q  11 ggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  22948074 ggtgttagtatgtgttgattatattttcataagatgatgaatac 22948031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 22952030 - 22951987
Alignment:
Q  11 ggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  22952030 ggtgttagtatgtgttgattatattttcataagatgatgaatac 22951987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 23870518 - 23870475
Alignment:
Q  11 ggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  23870518 ggtgttagtatgtgttgattatattttcataagatgatgaatac 23870475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 23874474 - 23874431
Alignment:
Q  11 ggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  23874474 ggtgttagtatgtgttgattatattttcataagatgatgaatac 23874431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 23538069 - 23538019
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||| |||||||||||||| | ||||||||||||||| ||||||||||||    
T  23538069 gtgataatgattacatgatgttgtctatgagttgttaaatgtacttgatga 23538019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 27222920 - 27222870
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  27222920 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 27222870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 14471303 - 14471255
Alignment:
Q  5 gactatggtgttagtatgtgttgattatatt-ttataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  14471303 gactatggtgttagtatgtgttgattatattaatataagaagatgaata 14471255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 16622921 - 16622873
Alignment:
Q  301 gatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  16622921 gatgatgattacatgatattatctatgaattgttaaatgtacttgatga 16622873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 31479455 - 31479503
Alignment:
Q  301 gatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||  ||||||||||||||||| |||| |||||||    
T  31479455 gatgatgattacatgatattatctatgagttgttaaatgtatttgatga 31479503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 12941309 - 12941259
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||   |||| ||||||||||||||||| ||||||||||||    
T  12941309 gtgatgatgattatgagatgttatctatgagttgttaaatgtacttgatga 12941259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 25737970 - 25737930
Alignment:
Q  309 ttacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||| ||||||||||||| ||| ||||||||||||    
T  25737970 ttacatgatgttatctatgagttggtaaatgtacttgatga 25737930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 349
Target Start/End: Original strand, 27416540 - 27416568
Alignment:
Q  321 atctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||    
T  27416540 atctatgagttgttaagtgtacttgatga 27416568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 345
Target Start/End: Original strand, 34297773 - 34297809
Alignment:
Q  309 ttacatgatgatatctatgagttgttaagtgtacttg 345  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  34297773 ttacatgatgttatctatgagttgttaaatgtacttg 34297809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 19474131 - 19474213
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19474131 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 19474213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 20294634 - 20294552
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20294634 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 20294552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 18354915 - 18354835
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18354915 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 18354835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 349
Target Start/End: Original strand, 24768530 - 24768603
Alignment:
Q  276 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24768530 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacctgatga 24768603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 20912211 - 20912293
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20912211 gtgatgattatattgtattgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtacttgatga 20912293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 15238076 - 15238158
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  15238076 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 15238158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 22108409 - 22108490
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  22108409 tgatgattctattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 22108490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 40727358 - 40727440
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||||||| |||||||  |||||||||||||    
T  40727358 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgaagatatctataagttgtttggtgtacttgatga 40727440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 22120551 - 22120632
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| |||  || ||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  22120551 tgatgattatattgtgttattt--aatttattagtgatgatgattatatgatgttatctatgagttgttaaatgtacttgatga 22120632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 11219662 - 11219593
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  11219662 tgattacattgtgttgttttaaagttattagtgatgatgat-----------atctatgagttgttaagtgtacttgatga 11219593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 11224248 - 11224179
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  11224248 tgattacattgtgttgttttaaagttattagtgatgatgat-----------atctatgagttgttaagtgtacttgatga 11224179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 11226264 - 11226195
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  11226264 tgattacattgtgttgttttaaagttattagtgatgatgat-----------atctatgagttgttaagtgtacttgatga 11226195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 11228070 - 11228001
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  11228070 tgattacattgtgttgttttaaagttattagtgatgatgat-----------atctatgagttgttaagtgtacttgatga 11228001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 11230060 - 11229991
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  11230060 tgattacattgtgttgttttaaagttattagtgatgatgat-----------atctatgagttgttaagtgtacttgatga 11229991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 19473830 - 19473876
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  19473830 tatggtgttagtatgtgttgattatattttcataagatgatgaatac 19473876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 11219927 - 11219882
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  11219927 tatggtgttagtatgtgttgattatattttgataagatgatgaata 11219882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 11224513 - 11224468
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  11224513 tatggtgttagtatgtgttgattatattttgataagatgatgaata 11224468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 11226493 - 11226448
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  11226493 tatggtgttagtatgtgttgattatattttgataagatgatgaata 11226448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 11230325 - 11230280
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  11230325 tatggtgttagtatgtgttgattatattttgataagatgatgaata 11230280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 18355234 - 18355189
Alignment:
Q  8 tatggtgttagtatgtgttgattata-ttttataagatgatgaata 52  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  18355234 tatggtgttagtatgtgttgattatatttttataagatgatgaata 18355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 10751903 - 10751855
Alignment:
Q  301 gatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  10751903 gatgatgattacatgatattatctatgagttgttaaatgtacttgatga 10751855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 20294859 - 20294815
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  20294859 tggtgttagtatgtgttgattatattttcataagatgatgaatac 20294815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 40727069 - 40727112
Alignment:
Q  10 tggtgttagtatgtgttgattata-ttttataagatgatgaata 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  40727069 tggtgttagtatgtgttgattatatttttataagatgatgaata 40727112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 19510550 - 19510500
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  19510550 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 19510500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 22339100 - 22339050
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  22339100 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 22339050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 23113393 - 23113443
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  23113393 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 23113443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 28372072 - 28372122
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  28372072 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 28372122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 37599999 - 37600049
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  37599999 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 37600049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 38146409 - 38146459
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  38146409 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 38146459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 41878642 - 41878692
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  41878642 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 41878692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 11228329 - 11228290
Alignment:
Q  14 gttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11228329 gttagtatgtgttgattatattttgataagatgatgaata 11228290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 22335570 - 22335520
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| |||| |||||||    
T  22335570 gtgatgatgattatgtgatgttatctatgagttgttaaatgtatttgatga 22335520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 22749249 - 22749199
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||| ||||| ||||||||||||    
T  22749249 gtgatgatgattatgtgatgttatctatgagtggttaaatgtacttgatga 22749199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 9775014 - 9774978
Alignment:
Q  313 atgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  9775014 atgatgttatctatgagttgttaaatgtacttgatga 9774978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 36459626 - 36459586
Alignment:
Q  309 ttacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||| ||||||||||||||||| ||||||| ||||    
T  36459626 ttacatgatgttatctatgagttgttaaatgtacttaatga 36459586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 338
Target Start/End: Complemental strand, 39363027 - 39362991
Alignment:
Q  302 atgatgattacatgatgatatctatgagttgttaagt 338  Q
    ||||||||||||||||| | |||||||||||||||||    
T  39363027 atgatgattacatgatgttgtctatgagttgttaagt 39362991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 9555189 - 9555107
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9555189 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 9555107  T

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Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 14758950 - 14759032
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14758950 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 14759032  T

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Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 14955718 - 14955800
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14955718 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 14955800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 17807174 - 17807092
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17807174 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 17807092  T

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Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 25688562 - 25688480
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25688562 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 25688480  T

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Target: chr4; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 4562732 - 4562814
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4562732 gatgattatattgggttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 4562814  T

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Target: chr4; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 5758414 - 5758496
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5758414 gatgattctattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 5758496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 33740956 - 33740874
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33740956 gatgattatattgtgttgttttaaaattattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 33740874  T

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Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 20158408 - 20158488
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20158408 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 20158488  T

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Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 20163859 - 20163939
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20163859 tgattacattgtgttgttttaaagttattagtgatgacgattacatgatgatatctatgagttgttaagtgtacttgatga 20163939  T

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Target: chr4; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 20161084 - 20161162
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgat 347  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20161084 tgattacattgtgttgttttaaagttattagtgatgacgattacatgatgatatctatgagttgttaagtgtacttgat 20161162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 12486388 - 12486309
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  12486388 gatgattatattgtgttgttttaaagttattagtgatgat---tacatgatgatatctatgagttgttaagtgtacttgatga 12486309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 23996925 - 23997007
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  23996925 gtgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 23997007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 10711943 - 10711863
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  10711943 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtacttgatga 10711863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 10925713 - 10925633
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  10925713 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtacttgatga 10925633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 12423062 - 12422981
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  12423062 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 12422981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 17052405 - 17052486
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17052405 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 17052486  T

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Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 631706 - 631788
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  631706 gtgacgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 631788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 22634885 - 22634967
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  22634885 gtgatgatcatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 22634967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 27532872 - 27532790
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  27532872 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtacttgatga 27532790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 13813820 - 13813873
Alignment:
Q  296 ttagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  13813820 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 13813873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 13818308 - 13818361
Alignment:
Q  296 ttagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  13818308 ttagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 13818361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 24048375 - 24048425
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  24048375 gtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 24048425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 12486615 - 12486570
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  12486615 tatggtgttagtatgtgttgattatattttgataagatgatgaata 12486570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 4562433 - 4562477
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  4562433 tggtgttagtatgtgttgattatattttcataagatgatgaatac 4562477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 9555488 - 9555444
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  9555488 tggtgttagtatgtgttgattatattttcataagatgatgaatac 9555444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 14758574 - 14758618
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  14758574 tggtgttagtatgtgttgattatattttcataagatgatgaatac 14758618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 14955339 - 14955383
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  14955339 tggtgttagtatgtgttgattatattttcataagatgatgaatac 14955383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 15223632 - 15223584
Alignment:
Q  301 gatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  15223632 gatgatgattacatgatattatctatgagttgttaaatgtacttgatga 15223584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 33741258 - 33741214
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  33741258 tggtgttagtatgtgttgattatattttcataagatgatgaatac 33741214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 5757958 - 5758001
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  5757958 tggtgttagtatgtgttgattatattttcataagatgatgaata 5758001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 25688860 - 25688817
Alignment:
Q  11 ggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  25688860 ggtgttagtatgtgttgattatattttcataagatgatgaatac 25688817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 15533307 - 15533257
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  15533307 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 15533257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 18211692 - 18211642
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  18211692 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 18211642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 49549073 - 49549123
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  49549073 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 49549123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 30145872 - 30145821
Alignment:
Q  299 gtgatgatgattacatgatgatat-ctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  30145872 gtgatgatgattacatgatgttaagctatgagttgttaaatgtacttgatga 30145821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 36037040 - 36036990
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||   |||| ||||||||||||||||| ||||||||||||    
T  36037040 gtgatgatgattatgagatgttatctatgagttgttaaatgtacttgatga 36036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 7108358 - 7108276
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7108358 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 7108276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 7112293 - 7112211
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7112293 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 7112211  T

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Target: chr3; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 11068733 - 11068651
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11068733 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 11068651  T

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Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 22320249 - 22320167
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22320249 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 22320167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 22335304 - 22335222
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22335304 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 22335222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 55021496 - 55021414
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55021496 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 55021414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 11167052 - 11167134
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11167052 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtttacttgatga 11167134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 14498067 - 14497985
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14498067 gatgattatattgtgttgttttaaagttattagcgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 14497985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 28948581 - 28948499
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28948581 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctataagttgttaagtgtacttgatga 28948499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 5219965 - 5219885
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5219965 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 5219885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 11853824 - 11853744
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11853824 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 11853744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 37440641 - 37440721
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37440641 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 37440721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 267 - 346
Target Start/End: Complemental strand, 15616297 - 15616218
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttga 346  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15616297 gatgattataatgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttga 15616218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 11301626 - 11301706
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11301626 tgattacattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtacttgatga 11301706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 14664543 - 14664463
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14664543 tgattacattgtgttgttttaaagttattagtgatgatgattacataatgatatctatgagttgttaagtgtacttgatga 14664463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 14667707 - 14667627
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14667707 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgagatctatgagttgttaagtgtacttgatga 14667627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 16795622 - 16795541
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  16795622 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 16795541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 268 - 349
Target Start/End: Original strand, 12853325 - 12853404
Alignment:
Q  268 atgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  12853325 atgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 12853404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 18933337 - 18933396
Alignment:
Q  290 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18933337 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtacttgatga 18933396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 349
Target Start/End: Complemental strand, 30064482 - 30064423
Alignment:
Q  290 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30064482 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtacttgatga 30064423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 4590119 - 4590201
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  4590119 gtgacgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtacttgatga 4590201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 14670142 - 14670064
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  |||||||||||||||||   ||||||||| ||||||||||||||||| ||||||||||||    
T  14670142 tgatgattatattgtgttgttt--aagttattagtgatgat---tacatgatgttatctatgagttgttaaatgtacttgatga 14670064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 15463999 - 15463916
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgat-gatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||| |||| ||| ||||||||||||| ||||||||||||    
T  15463999 gtgatgattatattgtgttgttt--aagttattagtgattgatgattacaggatgttatatatgagttgttaaatgtacttgatga 15463916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 14068021 - 14068103
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||| ||| |||| |||||||    
T  14068021 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgctaaatgtatttgatga 14068103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 17318468 - 17318550
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| ||||  ||||||||||||||||||| ||||||| | |||||| |||||||||| ||||||||||||    
T  17318468 gtgatgattatattgtgtagttt--aagttattagtgatgatgaatacatgaagttatctaggagttgttaaatgtacttgatga 17318550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 12337348 - 12337294
Alignment:
Q  293 ttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  12337348 ttattagtgatgatgattacatgatgata--tatgagttgttaagtgtacttgatga 12337294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 4112607 - 4112649
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgat 309  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4112607 gatgattatattgtgttgttttaaagttattagtgatgatgat 4112649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 4108759 - 4108800
Alignment:
Q  268 atgattatattgtgttgttttaaagttattagtgatgatgat 309  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4108759 atgattatattgtgttgttttaaagttattagtgatgatgat 4108800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 10834935 - 10834982
Alignment:
Q  302 atgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  10834935 atgatgattacatgatgttatctatgagttgttaaatgtacttgatga 10834982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 14681664 - 14681588
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  ||||||||||   |||||||||||||||| ||||  ||||||||||| ||||||||||||    
T  14681664 tgatgattatattgtgttgttt--aagttattag---tgatgattacatgatgttatc--tgagttgttaaatgtacttgatga 14681588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 11069111 - 11069065
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  11069111 tatggtgttagtatgtgttgattatattttcataagatgatgaatac 11069065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 13435906 - 13435856
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  13435906 gtgatgatgattacatgatgttatatatgagttgttaaatgtacttgatga 13435856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 8928858 - 8928907
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatg 348  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  8928858 gtgatgatgattgcatgatgttatctatgagttgttaaatgtacttgatg 8928907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 15963869 - 15963824
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  15963869 tatggtgttagtatgtgttgattatattttgataagatgatgaata 15963824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 15967793 - 15967748
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  15967793 tatggtgttagtatgtgttgattatattttgataagatgatgaata 15967748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 15971717 - 15971672
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  15971717 tatggtgttagtatgtgttgattatattttgataagatgatgaata 15971672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 4108382 - 4108430
Alignment:
Q  5 gactatggtgttagtatgtgttgattata-ttttataagatgatgaata 52  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  4108382 gactttggtgttagtatgtgttgattatatttttataagatgatgaata 4108430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 4112234 - 4112282
Alignment:
Q  5 gactatggtgttagtatgtgttgattata-ttttataagatgatgaata 52  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  4112234 gactttggtgttagtatgtgttgattatatttttataagatgatgaata 4112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 7108657 - 7108613
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  7108657 tggtgttagtatgtgttgattatattttcataagatgatgaatac 7108613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 7112592 - 7112548
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  7112592 tggtgttagtatgtgttgattatattttcataagatgatgaatac 7112548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 11166676 - 11166720
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  11166676 tggtgttagtatgtgttgattatattttcataagatgatgaatac 11166720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 14498366 - 14498322
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  14498366 tggtgttagtatgtgttgattatattttcataagatgatgaatac 14498322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 15616596 - 15616552
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  15616596 tggtgttagtatgtgttgattatattttcataagatgatgaatac 15616552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 15963604 - 15963564
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgat 309  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15963604 tgattacattgtgttgttttaaagttattagtgatgatgat 15963564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 15967528 - 15967488
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgat 309  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15967528 tgattacattgtgttgttttaaagttattagtgatgatgat 15967488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 15971452 - 15971412
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgat 309  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  15971452 tgattacattgtgttgttttaaagttattagtgatgatgat 15971412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 22320625 - 22320581
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  22320625 tggtgttagtatgtgttgattatattttcataagatgatgaatac 22320581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 22335680 - 22335636
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  22335680 tggtgttagtatgtgttgattatattttcataagatgatgaatac 22335636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 28948803 - 28948759
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  28948803 tggtgttagtatgtgttgattatattttcataagatgatgaatac 28948759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 30064808 - 30064764
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  30064808 tggtgttagtatgtgttgattatattttcataagatgatgaatac 30064764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 55021946 - 55021902
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  55021946 tggtgttagtatgtgttgattatattttcataagatgatgaatac 55021902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 16751895 - 16751942
Alignment:
Q  302 atgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  16751895 atgatgattacatgatattatctatgagttgttaaatgtacttgatga 16751942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 3802058 - 3802008
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  3802058 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 3802008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 14067672 - 14067718
Alignment:
Q  8 tatggtgttagtatgtgttgattatattt-tataagatgatgaatac 53  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||    
T  14067672 tatggtgtcagtatgtgttgattatatttatataagatgatgaatac 14067718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 14764786 - 14764836
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  14764786 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 14764836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 20249840 - 20249890
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  20249840 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 20249890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 29545929 - 29545979
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  29545929 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 29545979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 54519685 - 54519635
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  54519685 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 54519635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 18899540 - 18899491
Alignment:
Q  300 tgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  18899540 tgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 18899491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 11912505 - 11912465
Alignment:
Q  309 ttacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  11912505 ttacatgatgttatctatgagttgttaaatgtacttgatga 11912465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 9532346 - 9532296
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||   |||| ||||||||||||||||| ||||||||||||    
T  9532346 gtgatgatgattatgagatgttatctatgagttgttaaatgtacttgatga 9532296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 12304262 - 12304212
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||   |||| ||||||||||||||||| ||||||||||||    
T  12304262 gtgatgatgattatgagatgttatctatgagttgttaaatgtacttgatga 12304212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 23372534 - 23372584
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||| ||||||||||||| ||||||||||||    
T  23372534 gtgatgatgattatgtgatgttatttatgagttgttaaatgtacttgatga 23372584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 51299621 - 51299571
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||| ||||||||||||| ||||||||||||    
T  51299621 gtgatgatgattatgtgatgttatttatgagttgttaaatgtacttgatga 51299571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 4108793 - 4108830
Alignment:
Q  313 atgatgatatctatgagttgtt-aagtgtacttgatga 349  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4108793 atgatgatatctatgagttgttaaagtgtacttgatga 4108830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 4112642 - 4112679
Alignment:
Q  313 atgatgatatctatgagttgtt-aagtgtacttgatga 349  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4112642 atgatgatatctatgagttgttaaagtgtacttgatga 4112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 8491732 - 8491773
Alignment:
Q  308 attacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| |||||| |||||||||| ||||||||||||    
T  8491732 attacatgatgttatctaggagttgttaaatgtacttgatga 8491773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 8490350 - 8490395
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattac 312  Q
    |||||||||||||||||| ||||  ||||||||||||||| |||||||    
T  8490350 gtgatgattatattgtgtagttt--aagttattagtgatggtgattac 8490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 19774284 - 19774236
Alignment:
Q  301 gatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||  | ||| ||||||||||| ||||||||||||    
T  19774284 gatgatgattacatgatattgtctgtgagttgttaaatgtacttgatga 19774236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 24630006 - 24630088
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630006 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 24630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 24645271 - 24645189
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24645271 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 24645189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 24648047 - 24647965
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24648047 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 24647965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 27600491 - 27600409
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27600491 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 27600409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 30346616 - 30346698
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346616 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 30346698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 10103255 - 10103337
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10103255 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgttgatatctatgagttgttaagtgtacttgatga 10103337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 12902565 - 12902647
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12902565 gatgattatattgtgttgttttaaagttattagtgatgatgattacataatgatatctatgagttgttaagtgtacttgatga 12902647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 27380952 - 27381034
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27380952 gatgattatatggtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 27381034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 27384922 - 27385004
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27384922 gatgattatatggtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 27385004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 31344035 - 31343955
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  31344035 tgattacattgtgttgttttaaagttattagtgatgatgattacatgaagatatctatgagttgttaggtgtacttgatga 31343955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 9784113 - 9784032
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  9784113 tgataattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgtttaatgtacttgatga 9784032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 41532414 - 41532483
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||    
T  41532414 tgattacattgtgttgttttaaagttattagtg-----------atgatgatatctatgagttgttaagtgtacttgatga 41532483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 41532149 - 41532194
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  41532149 tatggtgttagtatgtgttgattatattttgataagatgatgaata 41532194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 10102956 - 10103000
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  10102956 tggtgttagtatgtgttgattatattttcataagatgatgaatac 10103000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 24629627 - 24629671
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  24629627 tggtgttagtatgtgttgattatattttcataagatgatgaatac 24629671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 27380500 - 27380544
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  27380500 tggtgttagtatgtgttgattatattttcataagatgatgaatac 27380544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 27384546 - 27384590
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  27384546 tggtgttagtatgtgttgattatattttcataagatgatgaatac 27384590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 27600790 - 27600746
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  27600790 tggtgttagtatgtgttgattatattttcataagatgatgaatac 27600746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 30346163 - 30346207
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  30346163 tggtgttagtatgtgttgattatattttcataagatgatgaatac 30346207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 6481872 - 6481822
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  6481872 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 6481822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 6485339 - 6485289
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  6485339 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 6485289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 19663548 - 19663598
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  19663548 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 19663598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 20260345 - 20260295
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  20260345 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 20260295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 21074498 - 21074548
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||  |||||||| ||||||||||||||||| ||||||||||||    
T  21074498 gtgatgatgacaacatgatgttatctatgagttgttaaatgtacttgatga 21074548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 349
Target Start/End: Complemental strand, 24647166 - 24647132
Alignment:
Q  315 gatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||    
T  24647166 gatgatatctatgagttgttaagtgtacttgatga 24647132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 1282396 - 1282351
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  1282396 tatggtgttagtatgtgttgattacattttgataagatgatgaata 1282351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 9240759 - 9240712
Alignment:
Q  302 atgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  9240759 atgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 9240712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 1009382 - 1009300
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1009382 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 1009300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 1926754 - 1926836
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1926754 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 1926836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 16376774 - 16376856
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16376774 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 16376856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 20925768 - 20925850
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20925768 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 20925850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 52634388 - 52634306
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52634388 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 52634306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 33796151 - 33796071
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33796151 tgattacattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 33796071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 22132058 - 22132139
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  22132058 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 22132139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 21406373 - 21406291
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  21406373 gtgatgattatattgtgtagttt--aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtacttgatga 21406291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 41801238 - 41801319
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  41801238 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatattatctatgagttgttaaatgtacttgatga 41801319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 20230120 - 20230179
Alignment:
Q  290 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20230120 aagttattagtgatgatgattacatgatgttatctatgagttgttaagtgtacttgatga 20230179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 1009681 - 1009637
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  1009681 tggtgttagtatgtgttgattatattttcataagatgatgaatac 1009637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 1926301 - 1926345
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  1926301 tggtgttagtatgtgttgattatattttcataagatgatgaatac 1926345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 16376552 - 16376596
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  16376552 tggtgttagtatgtgttgattatattttcataagatgatgaatac 16376596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 20925315 - 20925359
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  20925315 tggtgttagtatgtgttgattatattttcataagatgatgaatac 20925359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 39245163 - 39245211
Alignment:
Q  301 gatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  39245163 gatgatgattacatgatattatctatgagttgttaaatgtacttgatga 39245211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 39248718 - 39248766
Alignment:
Q  301 gatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  39248718 gatgatgattacatgatattatctatgagttgttaaatgtacttgatga 39248766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 41389657 - 41389705
Alignment:
Q  301 gatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  41389657 gatgatgattacatgatattatctatgagttgttaaatgtacttgatga 41389705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 52634767 - 52634723
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  52634767 tggtgttagtatgtgttgattatattttcataagatgatgaatac 52634723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 16371013 - 16370963
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  16371013 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 16370963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 33796503 - 33796462
Alignment:
Q  8 tatggtgttagtatgtgttgattata-ttttataagatgatg 48  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  33796503 tatggtgttagtatgtgttgattatatttttataagatgatg 33796462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 11809949 - 11809990
Alignment:
Q  308 attacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  11809949 attacatgatgttacctatgagttgttaaatgtacttgatga 11809990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 267 - 348
Target Start/End: Original strand, 68514 - 68595
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatg 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  68514 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatg 68595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 68328 - 68371
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  68328 tggtgttagtatgtgttgattatattttcataagatgatgaata 68371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 6279 - 6361
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6279 gatgattatattgtgttgttttaaagttattagcgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 6361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 6167 - 6211
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  6167 tggtgttagtatgtgttgattatattttcataagatgatgaatac 6211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 60283 - 60366
Alignment:
Q  267 gatgattatattgtgttgttttaaa-gttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  60283 gatgattatattgtgttgttttaaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 60366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 11170 - 11089
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11170 gatgattat-ttgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 11089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 11475 - 11431
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  11475 tggtgttagtatgtgttgattatattttcataagatgatgaatac 11431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 781 - 861
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  781 tgattacattgtgttgttttaaagttattagtgatgatgattgcatgatgatatctatgagttgttaagtgtacttgatga 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 14962 - 14882
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14962 tgattacattgtgttgttttaaagttattagtgatgatgattacatgaagatatctatgagttgttaagtgtacttgatga 14882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 349
Target Start/End: Original strand, 11027 - 11100
Alignment:
Q  276 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11027 attgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacctgatga 11100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 8695 - 8615
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8695 tgattacatagtgtttttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 8615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 34089 - 34168
Alignment:
Q  267 gatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  34089 gatgattatattgtgttgttttaaagttattagtgat---gattacatgatgatatctatgagttgttaagtgtacttgatga 34168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 33862 - 33907
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  33862 tatggtgttagtatgtgttgattatattttgataagatgatgaata 33907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 11895 - 11815
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11895 tgattacattgtgttgttttaaaattattagtgatgatgattacatgatgaaatctatgagttgttaagtgtacttgatga 11815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 21298 - 21380
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  21298 tgatgattatattgtgttgttt-aaagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 21380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 6920 - 7001
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6920 tgatgattatattgtgttgttt--aagttattagtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 7001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 25526 - 25608
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  25526 gtgatgattatattgtgttgttt--aagttattagtgatgatgaatacatgatgttatctatgagttgttaaatgtacttgatga 25608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 4094 - 4012
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| ||||  |||||||||||||| |||||||||||||| |||||| |||||||||| ||||||||||||    
T  4094 gtgatgattatattgtgtagttt--aagttattagtgattatgattacatgatgttatctaggagttgttaaatgtacttgatga 4012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 308
Target Start/End: Complemental strand, 42 - 1
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatga 308  Q
    |||||||||||||||||| ||||  |||||||||||||||||||    
T  42 gtgatgattatattgtgtagttt--aagttattagtgatgatga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 8699 - 8780
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||||    
T  8699 tgatgattatattgtgttgttt--aatttattagtgatgatgattacatgatgttatctacgagttgttaaatgtacatgatga 8780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 74291 - 74372
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||| |||||||||  || |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  74291 tgatgattatatggtgttgttt--aatttattagtgaagatgattacatgatgttatctatgagttgttaaatgtacttgatga 74372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 18942 - 18861
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||  ||||| ||||||| ||||||||| ||||||||||||    
T  18942 tgatgattatattgtgttgtttca--gttattagtgatgatgattatgtgatgttatctataagttgttaaatgtacttgatga 18861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 37179 - 37238
Alignment:
Q  290 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  37179 aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtacttgatga 37238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 62821 - 62880
Alignment:
Q  290 aagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  62821 aagttattagtgatgatgattacatgatgttatctaggagttgttaaatgtacttgatga 62880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 79538 - 79489
Alignment:
Q  5 gactatggtgttagtatgtgttgattatattt-tataagatgatgaatac 53  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||    
T  79538 gactatggtgttagtatgtgttgattatatttatgtaagatgatgaatac 79489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 5917 - 5863
Alignment:
Q  293 ttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  5917 ttattagtgatgatgattacatgatgata--tatgagttgttaagtgtacttgatga 5863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 37161 - 37243
Alignment:
Q  266 tgatgattatattgtgttgttttaaagttatta-gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||||||||| || |  ||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  37161 tgatgattatattgtgtggtct--aagttattatgagatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 37243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 28560 - 28510
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  28560 gtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 28510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 34025 - 33975
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  34025 gtgatgatgattacatgatgttatctatgagttgttaaatgtacttgatga 33975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 5489 - 5571
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||| ||    |||||||||||||||||||||| |||| ||||| |||||||| ||| |||||||||||||    
T  5489 gtgatgattatattgtgtagtcc--aagttattagtgatgatgattatatgaagatatttatgagttcttaggtgtacttgatga 5571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 5006 - 5049
Alignment:
Q  10 tggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  5006 tggtgttagtatgtgttgattatgttttcataagatgatgaata 5049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 269 - 349
Target Start/End: Original strand, 15546 - 15615
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||| ||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||    
T  15546 tgattacattgtgttgttttaaagttattagtg-----------atgatgatatctatgagttgttaagtgtacttgatga 15615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 15281 - 15326
Alignment:
Q  8 tatggtgttagtatgtgttgattatatttt-ataagatgatgaata 52  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  15281 tatggtgttagtatgtgttgattatattttgataagatgatgaata 15326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 10874 - 10834
Alignment:
Q  269 tgattatattgtgttgttttaaagttattagtgatgatgat 309  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  10874 tgattacattgtgttgttttaaagttattagtgatgatgat 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 288 - 238
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  288 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 5330 - 5280
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  5330 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 5280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 10812 - 10862
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  10812 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 10862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 109689 - 109639
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  109689 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 109639  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 224133 - 224183
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  224133 gtgatgatgattatgtgatgttatctatgagttgttaaatgtacttgatga 224183  T

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Target: scaffold1873 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 753 - 691
Alignment:
Q  265 gtgatgattatattgtgttgttttaaagttattagtga-tgatgattacatgatgatatctatga 328  Q
    |||||||||||||||||||||||  ||||||||||||| || ||||||||||||| |||| ||||    
T  753 gtgatgattatattgtgttgttt--aagttattagtgattggtgattacatgatgttatccatga 691  T

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Target: scaffold0599 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 4199 - 4159
Alignment:
Q  309 ttacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  4199 ttacatgatgttatctatgagttgttaaatgtacttgatga 4159  T

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Target: scaffold0544 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 349
Target Start/End: Original strand, 3507 - 3557
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||  ||||| ||| ||||||||||||| ||||||||||||    
T  3507 gtgatgatgattatgtgatgttatttatgagttgttaaatgtacttgatga 3557  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 349
Target Start/End: Original strand, 23937 - 23978
Alignment:
Q  308 attacatgatgatatctatgagttgttaagtgtacttgatga 349  Q
    ||||||||||| |||||| |||||||||| ||||||||||||    
T  23937 attacatgatgttatctaggagttgttaaatgtacttgatga 23978  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 153803 - 153840
Alignment:
Q  299 gtgatgatgattacatgatgatatctatgagttgttaa 336  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  153803 gtgatgatgattacatgatgtcatctatgagttgttaa 153840  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 349
Target Start/End: Complemental strand, 70821 - 70793
Alignment:
Q  321 atctatgagttgttaagtgtacttgatga 349  Q
    |||||||||||||||||||||||||||||    
T  70821 atctatgagttgttaagtgtacttgatga 70793  T

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