View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10261_high_2 (Length: 520)

Name: NF10261_high_2
Description: NF10261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10261_high_2
NF10261_high_2
[»] chr1 (12 HSPs)
chr1 (19-447)||(45686005-45686432)
chr1 (448-503)||(33645015-33645071)
chr1 (443-503)||(23321259-23321321)
chr1 (448-503)||(9442989-9443046)
chr1 (448-493)||(13903381-13903427)
chr1 (448-493)||(43635836-43635882)
chr1 (443-503)||(32131903-32131964)
chr1 (448-503)||(8928816-8928872)
chr1 (448-503)||(13902066-13902122)
chr1 (448-503)||(14625371-14625427)
chr1 (448-493)||(14626788-14626835)
chr1 (448-492)||(14978312-14978356)
[»] chr8 (9 HSPs)
chr8 (448-503)||(39808650-39808705)
chr8 (446-503)||(27164658-27164716)
chr8 (448-503)||(27163117-27163174)
chr8 (446-487)||(28561433-28561475)
chr8 (446-487)||(28566931-28566973)
chr8 (448-503)||(39810086-39810143)
chr8 (448-503)||(42348962-42349019)
chr8 (445-478)||(38500539-38500572)
chr8 (448-493)||(1601674-1601721)
[»] chr3 (9 HSPs)
chr3 (448-503)||(54566513-54566568)
chr3 (448-503)||(10615276-10615332)
chr3 (448-503)||(46610010-46610066)
chr3 (448-503)||(10616773-10616830)
chr3 (448-503)||(15086223-15086280)
chr3 (448-493)||(46597518-46597564)
chr3 (443-503)||(48044270-48044331)
chr3 (448-503)||(37977506-37977562)
chr3 (448-503)||(46596096-46596152)
[»] chr2 (12 HSPs)
chr2 (446-503)||(16670498-16670556)
chr2 (448-493)||(5970764-5970809)
chr2 (448-493)||(38935946-38935991)
chr2 (443-493)||(38937518-38937569)
chr2 (448-487)||(41305882-41305921)
chr2 (448-503)||(1902931-1902988)
chr2 (448-503)||(7576326-7576383)
chr2 (448-503)||(23834582-23834639)
chr2 (460-493)||(45161391-45161424)
chr2 (448-493)||(1904418-1904465)
chr2 (448-503)||(23835772-23835828)
chr2 (444-476)||(41089411-41089443)
[»] chr5 (12 HSPs)
chr5 (443-503)||(15061823-15061884)
chr5 (448-503)||(30796580-30796636)
chr5 (448-503)||(11890099-11890154)
chr5 (448-503)||(11956140-11956197)
chr5 (448-503)||(11957648-11957705)
chr5 (448-493)||(15615104-15615150)
chr5 (448-503)||(21776906-21776963)
chr5 (448-503)||(41064145-41064202)
chr5 (448-503)||(41065656-41065713)
chr5 (448-503)||(13948582-13948638)
chr5 (448-492)||(21149112-21149156)
chr5 (446-503)||(35600538-35600597)
[»] chr7 (9 HSPs)
chr7 (448-503)||(48168851-48168907)
chr7 (448-493)||(9553401-9553447)
chr7 (448-503)||(9554259-9554316)
chr7 (448-503)||(11056730-11056787)
chr7 (443-492)||(16902348-16902397)
chr7 (448-492)||(33757411-33757456)
chr7 (445-478)||(48104507-48104540)
chr7 (448-493)||(34158059-34158106)
chr7 (446-478)||(44414103-44414135)
[»] chr6 (10 HSPs)
chr6 (448-503)||(56112-56168)
chr6 (448-492)||(26644088-26644132)
chr6 (448-492)||(26750054-26750098)
chr6 (448-503)||(12322802-12322859)
chr6 (448-503)||(22058278-22058335)
chr6 (448-503)||(24235630-24235687)
chr6 (448-500)||(3063486-3063539)
chr6 (444-477)||(4840683-4840716)
chr6 (448-503)||(14328646-14328702)
chr6 (448-503)||(14421656-14421712)
[»] chr4 (10 HSPs)
chr4 (448-503)||(20962195-20962251)
chr4 (448-503)||(54554384-54554440)
chr4 (443-478)||(2921799-2921834)
chr4 (448-503)||(12566938-12566995)
chr4 (448-503)||(34739889-34739946)
chr4 (448-493)||(43860923-43860969)
chr4 (450-492)||(53231777-53231819)
chr4 (448-503)||(21994328-21994384)
chr4 (450-503)||(34741393-34741448)
chr4 (448-503)||(50881422-50881478)
[»] scaffold0210 (2 HSPs)
scaffold0210 (448-503)||(5895-5952)
scaffold0210 (448-493)||(4708-4755)
[»] scaffold0176 (1 HSPs)
scaffold0176 (448-503)||(287-344)
[»] scaffold0809 (1 HSPs)
scaffold0809 (445-478)||(3767-3800)
[»] scaffold0804 (1 HSPs)
scaffold0804 (448-493)||(2734-2781)
[»] scaffold0250 (1 HSPs)
scaffold0250 (448-503)||(10081-10137)


Alignment Details
Target: chr1 (Bit Score: 375; Significance: 0; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 19 - 447
Target Start/End: Complemental strand, 45686432 - 45686005
Alignment:
Q  19 gcgaccgcattgtttatggtgtacatttggtcacaatgccgcttcaaaatctgtaggaatctttgcagcaaaattcacttgcaagttgcatctcgacacc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45686432 gcgaccgcattgtttatggtgtacatttggtcacaatgccgcttcaaaatctgtaggaatctttgcagcaaaattcacttgcaagttgcatctcgacacc 45686333  T
Q  119 ttccatcacctcaattttggcaggagtctcttatgattctgtcaccacgacattgttctcatcttcaccttgttctcatcatcatcatcaaggtgcgaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45686332 ttccatcacctcaattttggcaggagtctcttatgattctgtcaccacgacattgttctcatcttcaccttgttctcatcatcatcatcaaggtgcgaaa 45686233  T
Q  219 ttataaatgtcaatctttcaaattcctcacctcttggttatttgaatcatgacagaaaaccataatagcactatcaatggagtctccaaagatgttttca 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45686232 ttataaatgtcaatctttcaaattcctcacctcttggttatttgaatcatgacagaaacccataatagcactatcaatggagtctccaaagatgttttca 45686133  T
Q  319 tctttgaatttctcagtgccctacttctcgcctgattttgctttagtttcttc-nnnnnnnnggatttcaacctcttttgtactctatgaaaatttataa 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||  |||||||||||||    
T  45686132 tctttgaatttctcagtgccctacttctcgcctgattttgctttagtttcttctttttttttggatttcaacctcttttgtactc--tgaaaatttataa 45686035  T
Q  418 ttgttaaaaagaaaggaaactcatcaataa 447  Q
    |||||||||||||| |||||||||| ||||    
T  45686034 ttgttaaaaagaaaagaaactcatctataa 45686005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 33645015 - 33645071
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||| |||||||||||||| ||||||||||| |||||||| ||||| |||||||||    
T  33645015 ggttattagatctttaccccctgtaatataggtcacttttgattttgccccttgtaa 33645071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 503
Target Start/End: Original strand, 23321259 - 23321321
Alignment:
Q  443 aataaggttaatagatctttaccc--ctgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    |||| |||||||||||||||| ||  ||||||||||||||||||||| ||||| ||| |||||    
T  23321259 aatagggttaatagatctttatcctcctgtaatatagggcacttttggttttgccccatgtaa 23321321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 9443046 - 9442989
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||| ||||||||| ||||| |||||||||    
T  9443046 ggttaataggtctttacccccctgtaatatagagcacttttggttttgccccttgtaa 9442989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 493
Target Start/End: Complemental strand, 13903427 - 13903381
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttg 493  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  13903427 ggttaatagatctttaccccctgtaatataggtcacttttggttttg 13903381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 493
Target Start/End: Original strand, 43635836 - 43635882
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttg 493  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||    
T  43635836 ggttaataggtctttaccccctgtaatatagggcacttttggttttg 43635882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 503
Target Start/End: Complemental strand, 32131964 - 32131903
Alignment:
Q  443 aataaggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    |||| ||||||||| |||||||||| ||||||||||| |||||| | ||||| |||||||||    
T  32131964 aatagggttaataggtctttaccccctgtaatataggtcactttcggttttgccccttgtaa 32131903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 8928816 - 8928872
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| ||||||||| |||||||||| ||||| ||| |||||    
T  8928816 ggttaataggtctttaccccctgtaatataaggcacttttgattttgccccctgtaa 8928872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 13902066 - 13902122
Alignment:
Q  448 ggttaatagatctttacc-cctgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||| |||||||||||||||| ||||| ||||| ||| |||||    
T  13902066 ggttaataggtctttaccacctgtaatatagggcagttttggttttgccccctgtaa 13902122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 14625371 - 14625427
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| ||| |||||    
T  14625371 ggttaataggtctttaccccctgtaatataggacacttttggttttgccccctgtaa 14625427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 493
Target Start/End: Complemental strand, 14626835 - 14626788
Alignment:
Q  448 ggttaatagatctttac--ccctgtaatatagggcacttttgtttttg 493  Q
    ||||||||| |||||||  ||||||||||||||||||||||| |||||    
T  14626835 ggttaataggtctttactcccctgtaatatagggcacttttggttttg 14626788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 492
Target Start/End: Original strand, 14978312 - 14978356
Alignment:
Q  448 ggttaatagatctttacccctgtaatatagggcacttttgttttt 492  Q
    ||||||||| |||||||| || |||||||||||||||||| ||||    
T  14978312 ggttaataggtctttacctctataatatagggcacttttggtttt 14978356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 39808650 - 39808705
Alignment:
Q  448 ggttaatagatctttacccctgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||| ||| |||||    
T  39808650 ggttaataggtctttacccctgtaatatagggcacttttggttttgccccctgtaa 39808705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 27164716 - 27164658
Alignment:
Q  446 aaggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||| ||| |||||    
T  27164716 aaggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaa 27164658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 27163117 - 27163174
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  27163117 ggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaa 27163174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 28561433 - 28561475
Alignment:
Q  446 aaggttaatagatctttacccc-tgtaatatagggcacttttg 487  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  28561433 aaggttaatagagctttaccccctgtaatatagggcacttttg 28561475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 28566931 - 28566973
Alignment:
Q  446 aaggttaatagatctttacccc-tgtaatatagggcacttttg 487  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  28566931 aaggttaatagagctttaccccctgtaatatagggcacttttg 28566973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 39810143 - 39810086
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  39810143 ggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 39810086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 42348962 - 42349019
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  42348962 ggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 42349019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 478
Target Start/End: Complemental strand, 38500572 - 38500539
Alignment:
Q  445 taaggttaatagatctttacccctgtaatatagg 478  Q
    |||||||||||| |||||||||||||||||||||    
T  38500572 taaggttaataggtctttacccctgtaatatagg 38500539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 493
Target Start/End: Original strand, 1601674 - 1601721
Alignment:
Q  448 ggttaatagatctttacccct--gtaatatagggcacttttgtttttg 493  Q
    |||||||||| ||||||||||  ||||||||||||||||||| |||||    
T  1601674 ggttaatagacctttacccctctgtaatatagggcacttttggttttg 1601721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000005; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 54566513 - 54566568
Alignment:
Q  448 ggttaatagatctttacccctgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||| ||| |||||    
T  54566513 ggttaatagacctttacccctgtaatataggtcacttttggttttgtcccctgtaa 54566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 10615276 - 10615332
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||| ||| |||||    
T  10615276 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaa 10615332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 46610010 - 46610066
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||| ||| |||||    
T  46610010 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaa 46610066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 10616830 - 10616773
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  10616830 ggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 10616773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 15086223 - 15086280
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  15086223 ggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 15086280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 493
Target Start/End: Complemental strand, 46597564 - 46597518
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttg 493  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||    
T  46597564 ggttaataggtctttaccccctgtaatatagggcacttttggttttg 46597518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 503
Target Start/End: Original strand, 48044270 - 48044331
Alignment:
Q  443 aataaggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||| |||||||| |||||||||| ||| |||||||||||||||| ||||| ||| |||||    
T  48044270 aataaagttaataggtctttaccccctgtgatatagggcacttttggttttgccccctgtaa 48044331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 37977562 - 37977506
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| ||| |||||    
T  37977562 ggttaataggtctttaccccctgtaatataggacacttttggttttgccccctgtaa 37977506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 46596096 - 46596152
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    |||||||||| ||||||||| |||||||||||| ||||||| ||||| ||| |||||    
T  46596096 ggttaatagagctttaccccctgtaatatagggtacttttggttttgtcccatgtaa 46596152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 503
Target Start/End: Original strand, 16670498 - 16670556
Alignment:
Q  446 aaggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||| ||| |||||    
T  16670498 aaggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaa 16670556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 448 - 493
Target Start/End: Complemental strand, 5970809 - 5970764
Alignment:
Q  448 ggttaatagatctttacccctgtaatatagggcacttttgtttttg 493  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||    
T  5970809 ggttaataggtctttacccctgtaatatagggtacttttggttttg 5970764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 448 - 493
Target Start/End: Original strand, 38935946 - 38935991
Alignment:
Q  448 ggttaatagatctttacccctgtaatatagggcacttttgtttttg 493  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||||    
T  38935946 ggttaataggtctttacccctgtaatataggacacttttggttttg 38935991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 493
Target Start/End: Complemental strand, 38937569 - 38937518
Alignment:
Q  443 aataaggttaatagatctttacccc-tgtaatatagggcacttttgtttttg 493  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||| |||||    
T  38937569 aatagggttaataggtctttaccccctgtaatatagggcacttttggttttg 38937518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Original strand, 41305882 - 41305921
Alignment:
Q  448 ggttaatagatctttacccctgtaatatagggcacttttg 487  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  41305882 ggttaataggtctttacccctgtaatatagggcgcttttg 41305921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 1902931 - 1902988
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  1902931 ggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 1902988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 7576326 - 7576383
Alignment:
Q  448 ggttaatagatcttta--cccctgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||  |||||||||||||||||||||||| ||||| ||| |||||    
T  7576326 ggttaataggtctttatccccctgtaatatagggcacttttggttttgccccctgtaa 7576383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 23834582 - 23834639
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  23834582 ggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 23834639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 493
Target Start/End: Complemental strand, 45161424 - 45161391
Alignment:
Q  460 tttacccctgtaatatagggcacttttgtttttg 493  Q
    |||||||||||||||||||||||||||| |||||    
T  45161424 tttacccctgtaatatagggcacttttggttttg 45161391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 493
Target Start/End: Complemental strand, 1904465 - 1904418
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttg 493  Q
    ||||||||| ||||||||||  |||||||||||||||||||| |||||    
T  1904465 ggttaataggtctttacccccctgtaatatagggcacttttggttttg 1904418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 23835828 - 23835772
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| |||||||||||||||||||  ||||| ||| |||||    
T  23835828 ggttaataggtctttaccccctgtaatatagggcacttttagttttgccccctgtaa 23835772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 476
Target Start/End: Complemental strand, 41089443 - 41089411
Alignment:
Q  444 ataaggttaatagatctttacccctgtaatata 476  Q
    ||||||||||||| |||||||||||||||||||    
T  41089443 ataaggttaataggtctttacccctgtaatata 41089411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000008; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 503
Target Start/End: Complemental strand, 15061884 - 15061823
Alignment:
Q  443 aataaggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||| ||||| ||| |||||    
T  15061884 aatagggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaa 15061823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 30796580 - 30796636
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| | |||||||||||||||||| ||||| |||||||||    
T  30796580 ggttaataggtctttaccccctataatatagggcacttttggttttgccccttgtaa 30796636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 11890154 - 11890099
Alignment:
Q  448 ggttaatagatctttacccctgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    |||||||||  |||||||||||||||||||| |||||||| ||||| ||| |||||    
T  11890154 ggttaataggcctttacccctgtaatataggtcacttttggttttgccccctgtaa 11890099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 11956140 - 11956197
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  11956140 ggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaa 11956197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 11957705 - 11957648
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  11957705 ggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 11957648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 493
Target Start/End: Original strand, 15615104 - 15615150
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttg 493  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||    
T  15615104 ggttaataggtctttaccccctgtaatatagggcacttttggttttg 15615150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 21776963 - 21776906
Alignment:
Q  448 ggttaatagatctttacccct--gtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||||  ||||||||||||||||||| ||||| ||| |||||    
T  21776963 ggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgtaa 21776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 41064145 - 41064202
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  41064145 ggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 41064202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 41065713 - 41065656
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  41065713 ggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaa 41065656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 13948638 - 13948582
Alignment:
Q  448 ggttaatagatctttacc-cctgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    |||||||||  ||||||| |||||||||||||||||||||| ||||| ||| |||||    
T  13948638 ggttaataggcctttacctcctgtaatatagggcacttttggttttgccccctgtaa 13948582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 492
Target Start/End: Complemental strand, 21149156 - 21149112
Alignment:
Q  448 ggttaatagatctttacccctgtaatatagggcacttttgttttt 492  Q
    ||||||||| ||||||||||||||||||||| || ||||| ||||    
T  21149156 ggttaataggtctttacccctgtaatataggtcatttttggtttt 21149112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 35600597 - 35600538
Alignment:
Q  446 aaggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    |||||||||||  |||||||||  ||||||||||| |||||||| ||||| |||||||||    
T  35600597 aaggttaataggcctttacccccctgtaatataggtcacttttggttttgccccttgtaa 35600538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 48168851 - 48168907
Alignment:
Q  448 ggttaatagatctttaccc-ctgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||| ||||||||||||||||||||| ||||| ||| |||||    
T  48168851 ggttaataggtctttaccctctgtaatatagggcacttttggttttgccccctgtaa 48168907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 493
Target Start/End: Original strand, 9553401 - 9553447
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttg 493  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||    
T  9553401 ggttaataggtctttaccccctgtaatatagggcacttttggttttg 9553447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 9554316 - 9554259
Alignment:
Q  448 ggttaatagatctttaccc--ctgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    |||||||| ||||||||||  ||||||||||||||||||||| ||||| ||| |||||    
T  9554316 ggttaataaatctttaccctcctgtaatatagggcacttttggttttgccccctgtaa 9554259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 11056730 - 11056787
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  ||||||||| |||||||||| ||||| |||||||||    
T  11056730 ggttaataggtctttacccccctgtaatataaggcacttttggttttgccccttgtaa 11056787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 492
Target Start/End: Complemental strand, 16902397 - 16902348
Alignment:
Q  443 aataaggttaatagatctttacccctgtaatatagggcacttttgttttt 492  Q
    |||| ||||||||| ||||||||||||||||||||| || ||||| ||||    
T  16902397 aatagggttaataggtctttacccctgtaatataggtcatttttggtttt 16902348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 492
Target Start/End: Original strand, 33757411 - 33757456
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgttttt 492  Q
    |||||||||||||||||||| ||||||||||| |||||||| ||||    
T  33757411 ggttaatagatctttaccccctgtaatataggtcacttttgatttt 33757456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 478
Target Start/End: Original strand, 48104507 - 48104540
Alignment:
Q  445 taaggttaatagatctttacccctgtaatatagg 478  Q
    |||||||||||| |||||||||||||||||||||    
T  48104507 taaggttaataggtctttacccctgtaatatagg 48104540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 493
Target Start/End: Original strand, 34158059 - 34158106
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttg 493  Q
    ||||||||| ||||||||||  |||||||||||||||||||| |||||    
T  34158059 ggttaataggtctttacccccctgtaatatagggcacttttggttttg 34158106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 478
Target Start/End: Complemental strand, 44414135 - 44414103
Alignment:
Q  446 aaggttaatagatctttacccctgtaatatagg 478  Q
    ||||||||||| |||||||||||||||||||||    
T  44414135 aaggttaataggtctttacccctgtaatatagg 44414103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 56168 - 56112
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||| ||| |||||    
T  56168 ggttaataggtctttaccccctgtaatatagggcacttttgattttgtcccctgtaa 56112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 492
Target Start/End: Original strand, 26644088 - 26644132
Alignment:
Q  448 ggttaatagatctttacccctgtaatatagggcacttttgttttt 492  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||    
T  26644088 ggttaatagacctttacccctgtaatataggtcacttttggtttt 26644132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 492
Target Start/End: Original strand, 26750054 - 26750098
Alignment:
Q  448 ggttaatagatctttacccctgtaatatagggcacttttgttttt 492  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||    
T  26750054 ggttaatagacctttacccctgtaatataggtcacttttggtttt 26750098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 12322859 - 12322802
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  12322859 ggttaataggtctttacccccctgtaatatagggcacttttgattttgccccctgtaa 12322802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 22058335 - 22058278
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  22058335 ggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 22058278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 24235687 - 24235630
Alignment:
Q  448 ggttaatagatctttacccct--gtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||||  ||||||||||||||||||| ||||| ||| |||||    
T  24235687 ggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgtaa 24235630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 500
Target Start/End: Complemental strand, 3063539 - 3063486
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttg 500  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| ||||||    
T  3063539 ggttaataggtctttaccccctgtaatataggtcacttttggttttgccccttg 3063486  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 477
Target Start/End: Original strand, 4840683 - 4840716
Alignment:
Q  444 ataaggttaatagatctttacccctgtaatatag 477  Q
    ||||||||||||| ||||||||||||||||||||    
T  4840683 ataaggttaataggtctttacccctgtaatatag 4840716  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 14328702 - 14328646
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| ||| |||||    
T  14328702 ggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaa 14328646  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 14421712 - 14421656
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| ||| |||||    
T  14421712 ggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaa 14421656  T

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Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 20962195 - 20962251
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||| ||| |||||    
T  20962195 ggttaatagatctttaccccctgtaatatatggcacttttggttttgccccctgtaa 20962251  T

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Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 54554384 - 54554440
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||| ||| |||||    
T  54554384 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaa 54554440  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 478
Target Start/End: Complemental strand, 2921834 - 2921799
Alignment:
Q  443 aataaggttaatagatctttacccctgtaatatagg 478  Q
    |||||||||||||||||||||||||| |||||||||    
T  2921834 aataaggttaatagatctttacccctataatatagg 2921799  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 12566995 - 12566938
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  12566995 ggttaataggtctttacccccttgtaatatagggcacttttggttttgccccctgtaa 12566938  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 34739889 - 34739946
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  34739889 ggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaa 34739946  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 493
Target Start/End: Complemental strand, 43860969 - 43860923
Alignment:
Q  448 ggttaatagatctttacc-cctgtaatatagggcacttttgtttttg 493  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||    
T  43860969 ggttaataggtctttacctcctgtaatatagggcacttttggttttg 43860923  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 492
Target Start/End: Original strand, 53231777 - 53231819
Alignment:
Q  450 ttaatagatctttacccctgtaatatagggcacttttgttttt 492  Q
    ||||||||||||||||||||||||||||| || ||||| ||||    
T  53231777 ttaatagatctttacccctgtaatataggtcatttttggtttt 53231819  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 21994328 - 21994384
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| ||| |||||    
T  21994328 ggttaataggtctttaccccctgtaatataggacacttttgattttgtcccctgtaa 21994384  T

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Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 503
Target Start/End: Complemental strand, 34741448 - 34741393
Alignment:
Q  450 ttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  34741448 ttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaa 34741393  T

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Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 50881478 - 50881422
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||||| ||| |||||    
T  50881478 ggttaataggtctttaccccctgtaatataggccacttttggttttgccccctgtaa 50881422  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 5952 - 5895
Alignment:
Q  448 ggttaatagatctttaccc--ctgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||| |  ||||||||||||||||||||| ||||| |||||||||    
T  5952 ggttaataggtctttacactcctgtaatatagggcacttttggttttgccccttgtaa 5895  T

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Target: scaffold0210; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 493
Target Start/End: Original strand, 4708 - 4755
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttg 493  Q
    ||||||||| ||||||||||  |||||||||||||||||||| |||||    
T  4708 ggttaataggtctttacccccctgtaatatagggcacttttggttttg 4755  T

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Target: scaffold0176 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 503
Target Start/End: Complemental strand, 344 - 287
Alignment:
Q  448 ggttaatagatctttacccc--tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||||    
T  344 ggttaataggtctttacccccatgtaatatagggcacttttggttttgccccctgtaa 287  T

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Target: scaffold0809 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 478
Target Start/End: Original strand, 3767 - 3800
Alignment:
Q  445 taaggttaatagatctttacccctgtaatatagg 478  Q
    |||||||||||| |||||||||||||||||||||    
T  3767 taaggttaataggtctttacccctgtaatatagg 3800  T

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Target: scaffold0804 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 493
Target Start/End: Original strand, 2734 - 2781
Alignment:
Q  448 ggttaatagatctttac--ccctgtaatatagggcacttttgtttttg 493  Q
    ||||||||| |||||||  ||||||||||||||||||||||| |||||    
T  2734 ggttaataggtctttactcccctgtaatatagggcacttttggttttg 2781  T

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Target: scaffold0250 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 10081 - 10137
Alignment:
Q  448 ggttaatagatctttacccc-tgtaatatagggcacttttgtttttgacccttgtaa 503  Q
    ||||||||| |||||||||| |||||||||||||||||||  ||||| ||| |||||    
T  10081 ggttaataggtctttaccccctgtaatatagggcacttttagttttgccccctgtaa 10137  T

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