View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261_high_27 (Length: 212)
Name: NF10261_high_27
Description: NF10261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 9516077 - 9516269
Alignment:
| Q |
5 |
cctcacacccatcattcttttcataattcgatacatattattcaaaactggtttaatacacacaacnnnnnnnctccacacaaaactacaagannnnnnn |
104 |
Q |
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| T |
9516077 |
cctcacacccatcattcttttcataattcgatacatattattcaaaactggtttaatacacacaacaaaaaaactccacaaaaaactacaagattttttt |
9516176 |
T |
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| Q |
105 |
natctttaccaatacctcaaagtccccgaactaaaccaaaccatgcaaccgaacatgttctatcgtaaagtttcgctttatttacattctctt |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9516177 |
tatctttaccaatacctcaaagtccccgaactaaaccaaaccatgcaaccgaacatgttctatcgtaaagtttcgctttatttacattctctt |
9516269 |
T |
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