View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10261_low_15 (Length: 387)

Name: NF10261_low_15
Description: NF10261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10261_low_15
NF10261_low_15
[»] chr1 (40 HSPs)
chr1 (32-368)||(48374791-48375127)
chr1 (290-373)||(9342777-9342860)
chr1 (259-373)||(11641199-11641313)
chr1 (259-373)||(36757618-36757732)
chr1 (259-372)||(40977621-40977734)
chr1 (259-373)||(6766388-6766499)
chr1 (259-373)||(6402542-6402656)
chr1 (259-373)||(42788674-42788788)
chr1 (259-372)||(16120573-16120686)
chr1 (259-372)||(30003549-30003662)
chr1 (259-373)||(17305970-17306084)
chr1 (259-373)||(30701734-30701848)
chr1 (259-373)||(36399114-36399228)
chr1 (259-373)||(40771904-40772018)
chr1 (259-373)||(52024042-52024156)
chr1 (271-373)||(24321287-24321391)
chr1 (260-370)||(4302135-4302242)
chr1 (259-373)||(42735297-42735414)
chr1 (290-373)||(42367428-42367511)
chr1 (299-373)||(3485339-3485413)
chr1 (259-373)||(27292656-27292770)
chr1 (300-368)||(22575724-22575792)
chr1 (259-373)||(15912468-15912582)
chr1 (271-372)||(26910104-26910205)
chr1 (298-355)||(44647863-44647920)
chr1 (298-350)||(44644510-44644562)
chr1 (301-368)||(14777090-14777157)
chr1 (299-373)||(40800519-40800593)
chr1 (301-355)||(30385295-30385349)
chr1 (299-356)||(34634963-34635020)
chr1 (299-373)||(16689880-16689951)
chr1 (298-362)||(28030824-28030888)
chr1 (315-370)||(15382561-15382616)
chr1 (306-373)||(31444986-31445053)
chr1 (329-370)||(25171240-25171281)
chr1 (329-373)||(44452120-44452164)
chr1 (299-373)||(40883466-40883540)
chr1 (298-368)||(50972771-50972841)
chr1 (299-355)||(51021012-51021069)
chr1 (302-342)||(52163614-52163654)
[»] chr8 (35 HSPs)
chr8 (259-373)||(132033-132147)
chr8 (259-373)||(14237296-14237410)
chr8 (259-373)||(18044441-18044555)
chr8 (259-373)||(32998466-32998580)
chr8 (270-373)||(41263837-41263940)
chr8 (259-373)||(616799-616913)
chr8 (259-373)||(623192-623306)
chr8 (259-373)||(42587380-42587494)
chr8 (272-373)||(5878345-5878446)
chr8 (259-373)||(38957186-38957300)
chr8 (259-373)||(40494400-40494514)
chr8 (259-373)||(36641990-36642105)
chr8 (270-373)||(2766180-2766283)
chr8 (259-373)||(3100627-3100741)
chr8 (259-373)||(4270224-4270338)
chr8 (271-373)||(13216853-13216955)
chr8 (271-373)||(8394374-8394476)
chr8 (259-373)||(35403532-35403646)
chr8 (271-373)||(22489405-22489508)
chr8 (300-373)||(33700205-33700278)
chr8 (272-349)||(36167105-36167182)
chr8 (298-370)||(3370391-3370463)
chr8 (313-373)||(40716655-40716715)
chr8 (301-355)||(5173309-5173363)
chr8 (259-373)||(11637798-11637912)
chr8 (259-345)||(24524116-24524202)
chr8 (305-373)||(18090390-18090458)
chr8 (306-373)||(18035163-18035230)
chr8 (316-370)||(38497145-38497199)
chr8 (299-373)||(40204854-40204928)
chr8 (305-373)||(18020928-18020999)
chr8 (310-373)||(9632222-9632285)
chr8 (329-373)||(32855594-32855638)
chr8 (272-373)||(6414097-6414198)
chr8 (303-355)||(10982640-10982692)
[»] chr7 (51 HSPs)
chr7 (259-373)||(44732028-44732142)
chr7 (259-373)||(20885119-20885233)
chr7 (259-373)||(28061647-28061761)
chr7 (259-373)||(36623324-36623438)
chr7 (259-373)||(38851979-38852093)
chr7 (259-373)||(41898004-41898118)
chr7 (259-373)||(47156043-47156157)
chr7 (271-373)||(39130058-39130160)
chr7 (259-373)||(40090050-40090164)
chr7 (259-373)||(40256073-40256187)
chr7 (259-373)||(16778521-16778635)
chr7 (259-373)||(32431490-32431604)
chr7 (259-373)||(42890475-42890589)
chr7 (290-373)||(7438950-7439033)
chr7 (298-373)||(48602491-48602566)
chr7 (259-371)||(3851093-3851202)
chr7 (259-371)||(6174852-6174961)
chr7 (259-373)||(46479845-46479959)
chr7 (299-372)||(11502713-11502786)
chr7 (293-370)||(46103505-46103582)
chr7 (266-373)||(35117149-35117255)
chr7 (270-373)||(36585136-36585239)
chr7 (259-373)||(41134620-41134729)
chr7 (274-373)||(4131635-4131734)
chr7 (298-373)||(5788509-5788584)
chr7 (299-374)||(42877442-42877517)
chr7 (299-373)||(6766682-6766756)
chr7 (259-373)||(25566680-25566793)
chr7 (259-373)||(30342090-30342204)
chr7 (290-373)||(8683865-8683945)
chr7 (299-355)||(7457872-7457928)
chr7 (298-373)||(41088642-41088717)
chr7 (315-373)||(21379816-21379874)
chr7 (316-373)||(23707555-23707612)
chr7 (300-372)||(47525969-47526042)
chr7 (305-373)||(2198664-2198732)
chr7 (301-369)||(27045544-27045612)
chr7 (310-373)||(49101945-49102008)
chr7 (301-369)||(37467444-37467511)
chr7 (259-343)||(46322127-46322211)
chr7 (301-372)||(3785578-3785649)
chr7 (301-368)||(49110607-49110674)
chr7 (301-355)||(7169184-7169238)
chr7 (299-341)||(38767223-38767265)
chr7 (312-373)||(5529080-5529141)
chr7 (316-373)||(19120662-19120719)
chr7 (316-353)||(26161669-26161706)
chr7 (299-373)||(16870612-16870686)
chr7 (315-373)||(35570181-35570239)
chr7 (300-341)||(42662243-42662284)
chr7 (312-368)||(4048871-4048927)
[»] chr6 (39 HSPs)
chr6 (259-373)||(24624073-24624187)
chr6 (259-373)||(6563242-6563356)
chr6 (259-373)||(18668820-18668934)
chr6 (259-373)||(20226430-20226544)
chr6 (259-373)||(22120414-22120528)
chr6 (259-373)||(19088090-19088204)
chr6 (259-373)||(22054788-22054902)
chr6 (259-373)||(32414811-32414925)
chr6 (290-373)||(12226022-12226105)
chr6 (290-373)||(24955528-24955611)
chr6 (259-369)||(4147947-4148057)
chr6 (259-373)||(32671832-32671946)
chr6 (259-373)||(3989396-3989509)
chr6 (259-373)||(15383062-15383176)
chr6 (271-373)||(17213916-17214018)
chr6 (290-372)||(17257784-17257866)
chr6 (273-373)||(1040854-1040954)
chr6 (271-369)||(20437149-20437248)
chr6 (274-368)||(29790237-29790331)
chr6 (299-353)||(15337544-15337598)
chr6 (299-373)||(23158041-23158115)
chr6 (274-368)||(28477784-28477878)
chr6 (305-368)||(5495311-5495374)
chr6 (259-373)||(10520484-10520598)
chr6 (274-355)||(19240742-19240823)
chr6 (274-354)||(29693914-29693994)
chr6 (301-373)||(3623845-3623913)
chr6 (259-373)||(25475945-25476054)
chr6 (301-355)||(31869766-31869820)
chr6 (259-355)||(31569176-31569272)
chr6 (301-372)||(2360048-2360119)
chr6 (311-370)||(8101668-8101727)
chr6 (259-373)||(21540761-21540875)
chr6 (300-353)||(10298725-10298778)
chr6 (303-355)||(1260490-1260542)
chr6 (299-362)||(26567287-26567351)
chr6 (299-370)||(4440906-4440977)
chr6 (334-373)||(16193014-16193053)
chr6 (302-355)||(17155208-17155261)
[»] chr3 (39 HSPs)
chr3 (259-373)||(27334863-27334977)
chr3 (259-373)||(13499467-13499581)
chr3 (259-373)||(39866273-39866387)
chr3 (259-373)||(42490328-42490442)
chr3 (259-373)||(21005309-21005423)
chr3 (259-373)||(27010606-27010720)
chr3 (259-370)||(42761618-42761729)
chr3 (259-373)||(6910350-6910464)
chr3 (259-373)||(20765212-20765326)
chr3 (259-373)||(21797572-21797686)
chr3 (265-373)||(36227567-36227675)
chr3 (290-373)||(30213851-30213934)
chr3 (298-373)||(33415854-33415929)
chr3 (259-374)||(38137840-38137955)
chr3 (270-373)||(43467874-43467977)
chr3 (271-372)||(33803549-33803651)
chr3 (259-355)||(34912292-34912388)
chr3 (290-368)||(54507688-54507766)
chr3 (305-373)||(15568067-15568135)
chr3 (302-373)||(41751542-41751613)
chr3 (304-373)||(15332938-15333007)
chr3 (299-373)||(3430409-3430480)
chr3 (290-373)||(43181487-43181571)
chr3 (301-373)||(48334653-48334724)
chr3 (299-370)||(33128054-33128125)
chr3 (300-373)||(41252898-41252968)
chr3 (259-336)||(19823916-19823993)
chr3 (298-355)||(25527459-25527516)
chr3 (299-373)||(47164587-47164659)
chr3 (312-364)||(17643800-17643852)
chr3 (305-373)||(52167271-52167339)
chr3 (298-370)||(44561839-44561911)
chr3 (300-355)||(15664095-15664150)
chr3 (313-373)||(23940497-23940554)
chr3 (305-354)||(3017853-3017902)
chr3 (300-372)||(22786687-22786757)
chr3 (312-373)||(41943283-41943344)
chr3 (315-355)||(23224306-23224346)
chr3 (312-348)||(27813445-27813481)
[»] chr2 (33 HSPs)
chr2 (259-373)||(6223082-6223196)
chr2 (259-373)||(5405012-5405126)
chr2 (259-373)||(7608065-7608179)
chr2 (259-373)||(8042154-8042268)
chr2 (259-373)||(19141198-19141312)
chr2 (259-373)||(11841725-11841839)
chr2 (259-373)||(39358162-39358276)
chr2 (259-373)||(44365173-44365287)
chr2 (290-373)||(13125277-13125360)
chr2 (259-373)||(2183092-2183203)
chr2 (298-373)||(36072229-36072304)
chr2 (272-373)||(7799876-7799977)
chr2 (299-355)||(19262736-19262792)
chr2 (299-370)||(11931747-11931818)
chr2 (299-369)||(9172282-9172352)
chr2 (299-373)||(38292008-38292082)
chr2 (299-373)||(24252016-24252089)
chr2 (315-373)||(31610785-31610843)
chr2 (301-355)||(42133810-42133864)
chr2 (304-355)||(43444690-43444741)
chr2 (300-350)||(9006939-9006989)
chr2 (299-373)||(22839059-22839133)
chr2 (298-372)||(32774646-32774720)
chr2 (259-373)||(36719456-36719565)
chr2 (299-372)||(13117457-13117530)
chr2 (259-373)||(33607392-33607502)
chr2 (300-372)||(44644927-44644999)
chr2 (306-373)||(38839136-38839203)
chr2 (298-354)||(16865109-16865165)
chr2 (300-355)||(31904030-31904085)
chr2 (299-373)||(9553853-9553926)
chr2 (299-352)||(44563150-44563204)
chr2 (313-353)||(3837271-3837311)
[»] chr5 (36 HSPs)
chr5 (259-373)||(978093-978207)
chr5 (259-371)||(3472411-3472523)
chr5 (259-373)||(9502759-9502873)
chr5 (259-373)||(33387236-33387350)
chr5 (259-373)||(33587601-33587715)
chr5 (259-373)||(11785857-11785972)
chr5 (259-373)||(8086162-8086276)
chr5 (259-373)||(14634289-14634403)
chr5 (259-373)||(7224181-7224295)
chr5 (259-373)||(18094213-18094327)
chr5 (300-373)||(24992270-24992343)
chr5 (302-373)||(11761125-11761196)
chr5 (290-373)||(40156245-40156328)
chr5 (299-355)||(32017269-32017325)
chr5 (259-373)||(11251130-11251244)
chr5 (259-373)||(30355006-30355120)
chr5 (273-355)||(34111992-34112074)
chr5 (316-373)||(9050708-9050765)
chr5 (299-372)||(12456773-12456846)
chr5 (300-373)||(24916378-24916453)
chr5 (298-373)||(27109744-27109818)
chr5 (298-373)||(27579562-27579637)
chr5 (315-373)||(12359953-12360011)
chr5 (315-373)||(32400399-32400457)
chr5 (301-370)||(18998745-18998814)
chr5 (300-345)||(37495667-37495712)
chr5 (298-373)||(12447550-12447623)
chr5 (300-367)||(26387017-26387084)
chr5 (315-372)||(3422343-3422400)
chr5 (312-373)||(6996049-6996110)
chr5 (272-353)||(39776659-39776740)
chr5 (309-352)||(13812113-13812156)
chr5 (299-341)||(4671265-4671307)
chr5 (324-373)||(7749869-7749918)
chr5 (298-351)||(38916404-38916457)
chr5 (298-370)||(12007767-12007839)
[»] chr4 (56 HSPs)
chr4 (259-373)||(43967739-43967853)
chr4 (290-373)||(26125755-26125838)
chr4 (259-370)||(38416785-38416896)
chr4 (290-373)||(45291879-45291962)
chr4 (290-373)||(47386418-47386501)
chr4 (271-373)||(25296712-25296814)
chr4 (259-373)||(26170002-26170116)
chr4 (271-373)||(44232209-44232311)
chr4 (259-373)||(2760862-2760973)
chr4 (290-373)||(29830390-29830473)
chr4 (258-373)||(54330822-54330937)
chr4 (259-373)||(12240310-12240424)
chr4 (259-373)||(12625267-12625381)
chr4 (259-373)||(17610296-17610410)
chr4 (283-373)||(50181100-50181190)
chr4 (259-373)||(55209706-55209820)
chr4 (298-373)||(31010269-31010344)
chr4 (299-373)||(9029581-9029655)
chr4 (259-373)||(19433490-19433608)
chr4 (298-373)||(3037035-3037110)
chr4 (259-366)||(35381033-35381140)
chr4 (299-373)||(14144589-14144663)
chr4 (259-373)||(17446765-17446879)
chr4 (259-373)||(55191840-55191954)
chr4 (268-350)||(55800859-55800941)
chr4 (259-355)||(54610878-54610975)
chr4 (259-355)||(35686389-35686485)
chr4 (298-373)||(4467651-4467726)
chr4 (259-373)||(25918219-25918333)
chr4 (259-373)||(50620814-50620928)
chr4 (298-367)||(7614670-7614739)
chr4 (301-370)||(19903785-19903854)
chr4 (298-355)||(38716941-38716998)
chr4 (290-370)||(19595752-19595832)
chr4 (301-373)||(55091319-55091391)
chr4 (298-373)||(50205798-50205873)
chr4 (312-373)||(2571014-2571075)
chr4 (298-355)||(38721392-38721449)
chr4 (298-373)||(37767090-37767165)
chr4 (299-353)||(53304481-53304535)
chr4 (299-373)||(27407749-27407825)
chr4 (301-373)||(20875379-20875451)
chr4 (299-354)||(29051740-29051793)
chr4 (290-370)||(32871494-32871574)
chr4 (298-373)||(39307751-39307826)
chr4 (298-368)||(36523105-36523175)
chr4 (299-372)||(50815017-50815091)
chr4 (298-355)||(34316576-34316632)
chr4 (315-373)||(10550498-10550553)
chr4 (272-344)||(34652208-34652280)
chr4 (305-373)||(56297834-56297902)
chr4 (315-370)||(27344083-27344138)
chr4 (298-373)||(30446353-30446427)
chr4 (302-353)||(51456506-51456556)
chr4 (329-373)||(30191605-30191649)
chr4 (305-345)||(43968232-43968272)
[»] scaffold0022 (1 HSPs)
scaffold0022 (259-373)||(100779-100893)
[»] scaffold0608 (1 HSPs)
scaffold0608 (283-373)||(1560-1650)
[»] scaffold0018 (1 HSPs)
scaffold0018 (259-373)||(67901-68015)
[»] scaffold0295 (1 HSPs)
scaffold0295 (290-373)||(13849-13932)
[»] scaffold0225 (1 HSPs)
scaffold0225 (299-373)||(8965-9039)
[»] scaffold0056 (1 HSPs)
scaffold0056 (259-373)||(70977-71090)
[»] scaffold0029 (1 HSPs)
scaffold0029 (299-373)||(138162-138236)
[»] scaffold0003 (1 HSPs)
scaffold0003 (290-370)||(161972-162052)
[»] scaffold0595 (1 HSPs)
scaffold0595 (300-373)||(4005-4079)
[»] scaffold0099 (1 HSPs)
scaffold0099 (300-372)||(28784-28857)
[»] scaffold0009 (2 HSPs)
scaffold0009 (299-370)||(53555-53626)
scaffold0009 (315-373)||(217007-217065)
[»] scaffold0262 (1 HSPs)
scaffold0262 (299-373)||(22836-22910)


Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 32 - 368
Target Start/End: Original strand, 48374791 - 48375127
Alignment:
Q  32 gatagttgatagatgtgtgtgtgttgtcaaatgcatatgaagtagtctttaatataaaagatgtgtgaacaacaagtcattgtatttgtcacaatataac 131  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  48374791 gatagttgatagatgtgtgtgtgttatcaaatgcatatgaagtagtctttaatttaaaagatgtgtgaaaaacaagtcattgtatttgtcacaatataac 48374890  T
Q  132 ctcaagtgaaatcaaatattatnnnnnnnntaaataaggattacattaataacatccacctacttttattcttt-nnnnnnnttgaatgctaaatagaat 230  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||||||||||        ||| ||||||||||| ||    
T  48374891 ctcaagtgaaatcaaatattataacaaaaataaataaggattacattaataacatccacctac-tttattctttaaaaaaaattggatgctaaatagtat 48374989  T
Q  231 gtttag-gtattgtttaagaattcaaaagaaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatct 329  Q
     ||||| ||||||||||| ||||||||| ||||||||||||||||||||||| ||| |  |||||||  ||||| ||||||||||||||||||||||| |    
T  48374990 -tttagagtattgtttaacaattcaaaacaaatatatgttcaatttttgcaatgtacattattcacttaacttattttgatcatattttttaactaattt 48375088  T
Q  330 ataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48375089 ataaatacaaatattagcatgtaagacattgtttgattt 48375127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 9342860 - 9342777
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  9342860 attcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 9342777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 11641313 - 11641199
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  11641313 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 11641214  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  11641213 tgtttgatttgtctc 11641199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 36757732 - 36757618
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  36757732 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 36757633  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  36757632 tgtttgatttgtctc 36757618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 40977734 - 40977621
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| || ||| ||||||| |||| ||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  40977734 aaatacatgtccaatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 40977635  T
Q  359 tgtttgatttgtct 372  Q
    ||||||||||||||    
T  40977634 tgtttgatttgtct 40977621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 6766388 - 6766499
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||       
T  6766388 aaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaaga--- 6766484  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  6766485 tgtttgatttgtctc 6766499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 6402656 - 6402542
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  6402656 aaatacatgtccaatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 6402557  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  6402556 tgtttgatttgtctc 6402542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 42788788 - 42788674
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    |||||||||| ||||||||| || ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||  |    
T  42788788 aaatatatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatttgcatgtaagatgt 42788689  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  42788688 tgtttgatttgtctc 42788674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 372
Target Start/End: Complemental strand, 16120686 - 16120573
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  |  ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  16120686 aaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 16120587  T
Q  359 tgtttgatttgtct 372  Q
    ||||||||||||||    
T  16120586 tgtttgatttgtct 16120573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 30003549 - 30003662
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||||||||| || ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  30003549 aaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 30003648  T
Q  359 tgtttgatttgtct 372  Q
    ||||||||||||||    
T  30003649 tgtttgatttgtct 30003662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 17305970 - 17306084
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| ||||||||||||  ||| ||||||| |||| |||||||||||||||||||||||||||  |    
T  17305970 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaatattagcatgtaagatgt 17306069  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  17306070 tgtttgatttgtctc 17306084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 30701734 - 30701848
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||||||||| || ||  || ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||| |||||||  |    
T  30701734 aaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgt 30701833  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  30701834 tgtttgatttgtctc 30701848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 36399114 - 36399228
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || |||||||  ||||||||||| |||| |||||||||||| ||||||||||||||||||| |||||||  |    
T  36399114 aaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgt 36399213  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  36399214 tgtttgatttgtctc 36399228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 40772018 - 40771904
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||||| || ||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  40772018 aaatacatgtccaatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 40771919  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  40771918 tgtttgatttgtctc 40771904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 52024042 - 52024156
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| ||  || |||||||  ||||||||||| |||| |||||||||||| |||||||| |||||||||| |||||||  |    
T  52024042 aaatacatgttcaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataaatattagcgtgtaagatgt 52024141  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  52024142 tgtttgatttgtctc 52024156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 373
Target Start/End: Original strand, 24321287 - 24321391
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcatat--tttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    ||||||||||| ||  || ||||||| || ||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  24321287 aatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaatacaaatattagcatgtaagatattgtttgattt 24321386  T
Q  369 gtctc 373  Q
    |||||    
T  24321387 gtctc 24321391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 370
Target Start/End: Original strand, 4302135 - 4302242
Alignment:
Q  260 aatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacatt 359  Q
    |||| ||||||||||||||||| ||| || ||| ||| ||||||||||||| || ||||||||||||| |||||||| ||||||||||||||||||   |    
T  4302135 aatacatgttcaatttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataaatattagcatgtaaga---t 4302231  T
Q  360 gtttgatttgt 370  Q
    |||||||||||    
T  4302232 gtttgatttgt 4302242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 42735414 - 42735297
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcata---ttttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||| |||||||||| |||||| ||  || ||||||| |||||||||||| ||||   ||||||||||||| |||||||||||||||||||||||||||    
T  42735414 aaatacatgttcaattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaatacaaatattagcatgtaaga 42735315  T
Q  356 cattgtttgatttgtctc 373  Q
       |||||||||||||||    
T  42735314 tgatgtttgatttgtctc 42735297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 42367511 - 42367428
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||||| || |||||||||  || |||||||||||||    
T  42367511 attcacttgacttactttgatcataatttttaactaatgtataaatacaaatactaacatgtaagatgttatttgatttgtctc 42367428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 3485413 - 3485339
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||   ||||||||||||||||    
T  3485413 acttactttgatcatattttttaactaatatataaatacaaatgttatcatgtaaggtgttgtttgatttgtctc 3485339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 27292656 - 27292770
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    |||||||||| ||||||||||||  |  || ||||||| || |||||||||  ||| |||||||||||  |||||||||||||||||||||||||||  |    
T  27292656 aaatatatgtccaatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaatacaaatattagcatgtaagatgt 27292755  T
Q  359 tgtttgatttgtctc 373  Q
    | |||||||||||||    
T  27292756 tatttgatttgtctc 27292770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 300 - 368
Target Start/End: Complemental strand, 22575792 - 22575724
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    |||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||  |||||||||||    
T  22575792 cttactttcatcatattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgattt 22575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 15912582 - 15912468
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||||| |||||||||||| |||| ||||| | | || | |||||||||||||||||||||||||  |    
T  15912582 aaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatacttttttatttatttttaaatacaaatattagcatgtaagatgt 15912483  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  15912482 tgtttgatttgtctc 15912468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 372
Target Start/End: Original strand, 26910104 - 26910205
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||| |||| ||||   ||||| ||||||    
T  26910104 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgcaagatgatgtttaatttgt 26910203  T
Q  371 ct 372  Q
    ||    
T  26910204 ct 26910205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 44647920 - 44647863
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  44647920 gacttattttgatcatattttttaacaaatatataaatacaaatgttagcatgtaaga 44647863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 350
Target Start/End: Complemental strand, 44644562 - 44644510
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatg 350  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  44644562 gacttactttgatcatattttttaacaaatatataaatacaaatgttagcatg 44644510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 14777090 - 14777157
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    ||||||||||||||||||||||||  | |||||||||||||||||  ||||||||  |||||||||||    
T  14777090 ttactttgatcatattttttaactgttatataaatacaaatattaatatgtaagatgttgtttgattt 14777157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 40800593 - 40800519
Alignment:
Q  299 acttactttgatcatatttttt-aactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| |||||||||| ||||||| ||||| ||||||| |||||||||||||  ||||||||||||||||    
T  40800593 acttactttgaccatatttttttaactaatatataa-tacaaatgttagcatgtaagatgttgtttgatttgtctc 40800519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 301 - 355
Target Start/End: Complemental strand, 30385349 - 30385295
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||    
T  30385349 ttactttgaccatattttttaactaatatataaatacaaatgttagtatgtaaga 30385295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Original strand, 34634963 - 34635020
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagac 356  Q
    ||||| |||||| |||||||||||||||| ||||||||||||| ||| ||||||||||    
T  34634963 acttattttgataatattttttaactaatatataaatacaaatgttaacatgtaagac 34635020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 16689880 - 16689951
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||||||||||| |||||||| ||||||||||   ||| |||||||| |  ||||||||||||||||    
T  16689880 acttactttgatcatattttctaactaatatataaataca---attcgcatgtaatatgttgtttgatttgtctc 16689951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 28030888 - 28030824
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtt 362  Q
    |||||| ||||| |||| |||||||||||  ||||||||||||| ||||||||||||| ||||||    
T  28030888 gacttattttgaccatactttttaactaacatataaatacaaatgttagcatgtaagatattgtt 28030824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 370
Target Start/End: Complemental strand, 15382616 - 15382561
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    |||||||| |||| |||||||||||||||||| ||||||||  |||||||||||||    
T  15382616 ttttttaaataatatataaatacaaatattagtatgtaagatgttgtttgatttgt 15382561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 31444986 - 31445053
Alignment:
Q  306 ttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||| ||||||||||||||||| |||||| |||||| || ||||||||||  |||||| |||||||||    
T  31444986 ttgaccatattttttaactaatatataaacacaaatgtttgcatgtaagatgttgtttaatttgtctc 31445053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 25171240 - 25171281
Alignment:
Q  329 tataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  25171240 tataaatacaaatattagcatgtaagatgttgtttgatttgt 25171281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 44452120 - 44452164
Alignment:
Q  329 tataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||    
T  44452120 tataaatacaaatgttagcatgtaaaatattgtttgatttgtctc 44452164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 40883466 - 40883540
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||||||||||| ||||||| || ||||| ||||| || ||| ||||| ||  || ||||||||||    
T  40883466 acttactttgatcatatttttcaactaatatacaaatataaatagtatcatataagatatcattagatttgtctc 40883540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 368
Target Start/End: Complemental strand, 50972841 - 50972771
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    |||||||||||| |||| ||||||| |||| ||||||||||||| ||| ||| ||| | |||||| |||||    
T  50972841 gacttactttgaacatactttttaaataatatataaatacaaatgttaacatataaaatattgttcgattt 50972771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 51021069 - 51021012
Alignment:
Q  299 acttactttgatcatattttttaactaatctataa-atacaaatattagcatgtaaga 355  Q
    ||||| ||||||||||||||||||||||| |||||   |||||| |||||||||||||    
T  51021069 acttaatttgatcatattttttaactaatatataatgcacaaatgttagcatgtaaga 51021012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 52163654 - 52163614
Alignment:
Q  302 tactttgatcatattttttaactaatctataaatacaaata 342  Q
    ||||||||||||||||||| |||||| |||||||| |||||    
T  52163654 tactttgatcatatttttttactaatatataaatataaata 52163614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 132033 - 132147
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| || ||||||||||||  || ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |    
T  132033 aaatacatgtccactttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcatgtaagatgt 132132  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  132133 tgtttgatttgtctc 132147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 14237296 - 14237410
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  |    
T  14237296 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgt 14237395  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  14237396 tgtttgatttgtctc 14237410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 18044441 - 18044555
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  |    
T  18044441 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgt 18044540  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  18044541 tgtttgatttgtctc 18044555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 32998466 - 32998580
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  |    
T  32998466 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgt 32998565  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  32998566 tgtttgatttgtctc 32998580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 270 - 373
Target Start/End: Original strand, 41263837 - 41263940
Alignment:
Q  270 caatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 369  Q
    |||||||||||| ||  || ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  41263837 caatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttg 41263936  T
Q  370 tctc 373  Q
    ||||    
T  41263937 tctc 41263940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 616799 - 616913
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  616799 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 616898  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  616899 tgtttgatttgtctc 616913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 623192 - 623306
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  623192 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 623291  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  623292 tgtttgatttgtctc 623306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 42587494 - 42587380
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  42587494 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 42587395  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  42587394 tgtttgatttgtctc 42587380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 272 - 373
Target Start/End: Original strand, 5878345 - 5878446
Alignment:
Q  272 atttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtc 371  Q
    |||||||||| ||  || ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||    
T  5878345 atttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatatcgtttgatttgtc 5878444  T
Q  372 tc 373  Q
    ||    
T  5878445 tc 5878446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 38957186 - 38957300
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    |||||||||| |||||||||||| ||  || ||| ||| || ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||  |    
T  38957186 aaatatatgtccaatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagcatgtaagatgt 38957285  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  38957286 tgtttgatttgtctc 38957300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 40494400 - 40494514
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  40494400 aaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 40494499  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  40494500 tgtttgatttgtctc 40494514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 36642105 - 36641990
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcat-attttttaactaatctataaatacaaatattagcatgtaagaca 357  Q
    ||||| ||||||||||||||||| ||  || ||||||| |||||||||||| ||| | ||||||||| || |||||||||||||||||||||||||||      
T  36642105 aaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatacaaatattagcatgtaagatg 36642006  T
Q  358 ttgtttgatttgtctc 373  Q
    ||||||||||||||||    
T  36642005 ttgtttgatttgtctc 36641990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 373
Target Start/End: Complemental strand, 2766283 - 2766180
Alignment:
Q  270 caatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 369  Q
    |||||||||||| ||  || ||| ||| |||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||  ||||||||||||    
T  2766283 caatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgtaagatgttgtttgatttg 2766184  T
Q  370 tctc 373  Q
    ||||    
T  2766183 tctc 2766180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 3100741 - 3100627
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||| ||| || ||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  3100741 aaatacatgtccaatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 3100642  T
Q  359 tgtttgatttgtctc 373  Q
    || ||||||||||||    
T  3100641 tgattgatttgtctc 3100627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 4270338 - 4270224
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||||||||| || ||  || ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| |  |    
T  4270338 aaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaacatgtaatatgt 4270239  T
Q  359 tgtttgatttgtctc 373  Q
    ||| |||||||||||    
T  4270238 tgtgtgatttgtctc 4270224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 13216955 - 13216853
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||| ||||||||||||| ||||  |||||||||||||    
T  13216955 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgaaagatgttgtttgatttgt 13216856  T
Q  371 ctc 373  Q
    |||    
T  13216855 ctc 13216853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 373
Target Start/End: Original strand, 8394374 - 8394476
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||| ||  || ||||||| |||||||||||| || |||||||||||||| ||||| |||||||||||| || |||||  |||||||||||||    
T  8394374 aatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaatgtataagtacaaatattagtatttaagatgttgtttgatttgt 8394473  T
Q  371 ctc 373  Q
    |||    
T  8394474 ctc 8394476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 35403532 - 35403646
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| ||| |||||||| |||| |||||||||||| |||||||||| |||||| |||||||||  |    
T  35403532 aaatacatgtccaatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaatacagatattaacatgtaagatgt 35403631  T
Q  359 tgtttgatttgtctc 373  Q
    ||||| |||||||||    
T  35403632 tgtttaatttgtctc 35403646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 22489508 - 22489405
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattag-catgtaagacattgtttgatttg 369  Q
    ||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||  ||| ||||  ||||||||||||    
T  22489508 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagtaatgcaagatgttgtttgatttg 22489409  T
Q  370 tctc 373  Q
    ||||    
T  22489408 tctc 22489405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 33700278 - 33700205
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||| | ||||||  ||||||||||||||||    
T  33700278 cttactttgaccatattttttaactaatatataaatacaaatgttagtaagtaagatgttgtttgatttgtctc 33700205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 36167105 - 36167182
Alignment:
Q  272 atttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcat 349  Q
    |||||||||| || ||| ||||||| ||||||||||||| ||| ||||| |||||| |||||||||||||||||||||    
T  36167105 atttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaatattagcat 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 370
Target Start/End: Complemental strand, 3370463 - 3370391
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    |||||||||||| |||||||||||| |||| ||||||||||||| |||  |||||||| ||||||||||||||    
T  3370463 gacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagatattgtttgatttgt 3370391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 40716715 - 40716655
Alignment:
Q  313 tattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  40716715 tattttttaactaatatataaatacaaattttagcatgtaagatgttgtttgatttgtctc 40716655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 301 - 355
Target Start/End: Original strand, 5173309 - 5173363
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  5173309 ttactttgatcatattatttaactaatatataaatacaaatattaacatgtaaga 5173363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 11637798 - 11637912
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    |||| ||||| |||||||| ||| ||  || ||||||| |||||| ||||| | || |||||||||| | ||||||||||| |||||||||||||||  |    
T  11637798 aaatgtatgtccaatttttacaatgtgcactattcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgtaagatgt 11637897  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||| ||||    
T  11637898 tgtttgatttatctc 11637912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 345
Target Start/End: Original strand, 24524116 - 24524202
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatatta 345  Q
    ||||| |||||||| |||||||| ||  || ||| ||| |||||||||||| |||| |||||||||||| |||||||||||||||||    
T  24524116 aaatacatgttcaaattttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 18090390 - 18090458
Alignment:
Q  305 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||| |||||  ||||| ||||||||||    
T  18090390 tttgatcatattttttaactaatatataaatataaatgttagcatataagatgttgttcgatttgtctc 18090458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 18035163 - 18035230
Alignment:
Q  306 ttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||| |||| |||||||||||| ||||||| ||||| |||||||||||||  ||||||||||||||||    
T  18035163 ttgaccataatttttaactaatatataaatgcaaatgttagcatgtaagatgttgtttgatttgtctc 18035230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 38497145 - 38497199
Alignment:
Q  316 tttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    |||||||||||| |||||||||||||||||||||| ||||  |||||||||||||    
T  38497145 tttttaactaatgtataaatacaaatattagcatggaagatgttgtttgatttgt 38497199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 40204928 - 40204854
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| |||||||||| |||||| ||||||||||||| |||||| |||||   ||||||||||| ||||    
T  40204928 acttactttgaacatattttttgactaatatataaatacaaatgttagcaggtaagttgttgtttgatttatctc 40204854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 18020928 - 18020999
Alignment:
Q  305 tttgatcatattttttaactaatctataaatacaaa---tattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||| ||||||||||||||||| || |||||||||   | ||||||||||||| |||||||||||||||||    
T  18020928 tttgaccatattttttaactaatatacaaatacaaaatgtgttagcatgtaagatattgtttgatttgtctc 18020999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 9632222 - 9632285
Alignment:
Q  310 tcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| |||||  ||||||||| ||| |||||||||||||  ||||||||||||||||    
T  9632222 tcatattttttcactaacatataaatactaatgttagcatgtaagatgttgtttgatttgtctc 9632285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 32855638 - 32855594
Alignment:
Q  329 tataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  32855638 tataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 32855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 373
Target Start/End: Complemental strand, 6414198 - 6414097
Alignment:
Q  272 atttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtc 371  Q
    |||||||||| ||  || ||||||  |||||||||||| |||| ||||||| |||| ||||||| |||| ||| | |||||| |  ||||| ||||||||    
T  6414198 atttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaatgcaaagattggtatgtaaaatgttgttcgatttgtc 6414099  T
Q  372 tc 373  Q
    ||    
T  6414098 tc 6414097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 10982692 - 10982640
Alignment:
Q  303 actttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||| ||||||||||||| ||| |||||| ||||||||||| || |||||    
T  10982692 actttgaccatattttttaaccaatatataaaaacaaatattagtatataaga 10982640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 44732028 - 44732142
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| ||  || ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  |    
T  44732028 aaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatgt 44732127  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  44732128 tgtttgatttgtctc 44732142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 20885119 - 20885233
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  |    
T  20885119 aaatacatgtccaatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgt 20885218  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  20885219 tgtttgatttgtctc 20885233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 28061761 - 28061647
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  28061761 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 28061662  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  28061661 tgtttgatttgtctc 28061647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 36623324 - 36623438
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  36623324 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 36623423  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  36623424 tgtttgatttgtctc 36623438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 38852093 - 38851979
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||    
T  38852093 aaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatat 38851994  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  38851993 tgtttgatttgtctc 38851979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 41898004 - 41898118
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  |    
T  41898004 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgt 41898103  T
Q  359 tgtttgatttgtctc 373  Q
    ||||| |||||||||    
T  41898104 tgtttcatttgtctc 41898118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 47156043 - 47156157
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  47156043 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 47156142  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  47156143 tgtttgatttgtctc 47156157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 39130160 - 39130058
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||| ||  || ||||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  39130160 aatttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 39130061  T
Q  371 ctc 373  Q
    |||    
T  39130060 ctc 39130058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 40090164 - 40090050
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    |||||||||| |||||||| ||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  40090164 aaatatatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 40090065  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||| ||||    
T  40090064 tgtttgatttatctc 40090050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 40256073 - 40256187
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||   | ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  40256073 aaatacatgtccaatttttgcaatgtgctctattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 40256172  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  40256173 tgtttgatttgtctc 40256187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 16778521 - 16778635
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||| |||||||| ||  || ||||||| | |||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  16778521 aaatacatgtccaacttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaaatattagcatgtaagatgt 16778620  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  16778621 tgtttgatttgtctc 16778635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 32431604 - 32431490
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||||||||  ||||||||||| ||  |  ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||  |    
T  32431604 aaatatatgtcaaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagtatgtaagatgt 32431505  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  32431504 tgtttgatttgtctc 32431490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 42890589 - 42890475
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||| | |||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  42890589 aaatacatgtccaatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 42890490  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  42890489 tgtttgatttgtctc 42890475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 7438950 - 7439033
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  7438950 attcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 7439033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 48602491 - 48602566
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  48602491 gacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 48602566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 371
Target Start/End: Original strand, 3851093 - 3851202
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    |||||||||| |||||||||||| ||    |||||||| ||||||||||||  ||| |||||||||||| ||||||||||||||||| || |||||| ||    
T  3851093 aaatatatgtccaatttttgcaatgtg---cattcacttgacttactttgacaatactttttaactaatgtataaatacaaatattaacacgtaagatat 3851189  T
Q  359 tgtttgatttgtc 371  Q
    |||||||||||||    
T  3851190 tgtttgatttgtc 3851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 371
Target Start/End: Original strand, 6174852 - 6174961
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    |||||||||| |||||||||||| ||  || ||||| | |||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||       
T  6174852 aaatatatgtccaatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaacattagcatgtaaga--- 6174948  T
Q  359 tgtttgatttgtc 371  Q
    |||||||||||||    
T  6174949 tgtttgatttgtc 6174961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 46479845 - 46479959
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||| ||||||| ||| ||  || |||| || |||||||||||| || | |||||||||||| |||||||||||||||||||||||||||  |    
T  46479845 aaatacatgtttaatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgtaagatgt 46479944  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  46479945 tgtttgatttgtctc 46479959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 11502786 - 11502713
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  | |||||||||||||    
T  11502786 acttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatgtcgtttgatttgtct 11502713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 293 - 370
Target Start/End: Complemental strand, 46103582 - 46103505
Alignment:
Q  293 cactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    |||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  46103582 cacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 46103505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 373
Target Start/End: Original strand, 35117149 - 35117255
Alignment:
Q  266 tgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttga 365  Q
    ||||||||||||||||  |  || ||||||| |||||||||||| |||| |||| ||||||| |||||||| ||||||||||||||||||  ||||||||    
T  35117149 tgttcaatttttgcaatatgcactattcacttgacttactttgaccatactttt-aactaatgtataaatataaatattagcatgtaagatgttgtttga 35117247  T
Q  366 tttgtctc 373  Q
    ||||||||    
T  35117248 tttgtctc 35117255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 373
Target Start/End: Original strand, 36585136 - 36585239
Alignment:
Q  270 caatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 369  Q
    |||||||||||| ||  || ||||||| |||||| ||| | |||| |||| ||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  36585136 caatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttg 36585235  T
Q  370 tctc 373  Q
    ||||    
T  36585236 tctc 36585239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 41134729 - 41134620
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||| ||| || ||| ||||| | |||||||||||| |||||     ||||||| |||||||||||||||||||||||||||  |    
T  41134729 aaatacatgttcaatttttacaatgtgtactattcatttgacttactttgaccatat-----aactaatgtataaatacaaatattagcatgtaagatgt 41134635  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  41134634 tgtttgatttgtctc 41134620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 373
Target Start/End: Complemental strand, 4131734 - 4131635
Alignment:
Q  274 ttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||| ||| |||||| ||||||   ||||||||| | ||||||||||||||||| ||||||||||||  |||||||||||||  ||||||||||||||||    
T  4131734 ttttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaatacaaaagttagcatgtaagatgttgtttgatttgtctc 4131635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 5788584 - 5788509
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||| |||||| ||||| |||||| |||||||||||||||||| ||||||||  ||||||||||||||||    
T  5788584 gacttactttaatcatacttttttactaatgtataaatacaaatattagtatgtaagatgttgtttgatttgtctc 5788509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 299 - 374
Target Start/End: Original strand, 42877442 - 42877517
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctct 374  Q
    ||||||||||| |||| |||||||||||| |||||||| ||||||||| ||||||||  |||||||||||||||||    
T  42877442 acttactttgaccatactttttaactaatgtataaataaaaatattagaatgtaagatgttgtttgatttgtctct 42877517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 6766756 - 6766682
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||| ||||| ||||||||||||||||| ||||||| ||||| |||||||||||||  ||||||||||||||||    
T  6766756 acttattttgaccatattttttaactaatgtataaatgcaaatgttagcatgtaagatgttgtttgatttgtctc 6766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 25566793 - 25566680
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||||| |||||||||||| |||| ||| |||||||| ||||| ||||||||||||||||| |||  |    
T  25566793 aaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtataa-tacaaatattagcatgtgagatgt 25566695  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  25566694 tgtttgatttgtctc 25566680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 30342090 - 30342204
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||| ||||||||||||| ||  |  ||||||| || |||||||||  ||| |||||||||||| |||||||||||||||||| ||||||||  |    
T  30342090 aaatacatgatcaatttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagtatgtaagatgt 30342189  T
Q  359 tgtttgatttgtctc 373  Q
     ||||||||||||||    
T  30342190 cgtttgatttgtctc 30342204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 8683865 - 8683945
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||   ||||  ||||||||||||||||    
T  8683865 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca---aagatgttgtttgatttgtctc 8683945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 7457928 - 7457872
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  7457928 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaga 7457872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 41088642 - 41088717
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||| |||||||||  |||  |||||||||||    
T  41088642 gacttactttgaccatattttttaactaatgtataaatgcaaatattaacatgtaagatgttgcatgatttgtctc 41088717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 21379816 - 21379874
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  21379816 ttttttagctaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 21379874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 23707612 - 23707555
Alignment:
Q  316 tttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||    
T  23707612 tttttaactaatgtataaatacaaatattagcatgtgagatattatttgatttgtctc 23707555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 47526042 - 47525969
Alignment:
Q  300 cttactttgatcatatttttt-aactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||  ||||| |||||||||    
T  47526042 cttactttgatcatatttttttaactaatatataaatacaaatgttagcatttaagatcttgttcgatttgtct 47525969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 2198664 - 2198732
Alignment:
Q  305 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||| |||| |||||||||||| ||||||||||||||||| || ||||||  ||||||||||||||||    
T  2198664 tttgaacatactttttaactaatgtataaatacaaatattaacaagtaagatgttgtttgatttgtctc 2198732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 27045612 - 27045544
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 369  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||  |||||| |||||    
T  27045612 ttactttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgtttaatttg 27045544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 49102008 - 49101945
Alignment:
Q  310 tcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||||||||  |||||||||||| || ||||||||||  ||||||||||||||||    
T  49102008 tcatattttttaactaatacataaatacaaatttttgcatgtaagatgttgtttgatttgtctc 49101945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 37467511 - 37467444
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 369  Q
    ||||||| | ||||||||||||||||| ||||||||||||| ||||||| |||||  ||||||||||||    
T  37467511 ttactttaaccatattttttaactaatatataaatacaaatgttagcatttaaga-tttgtttgatttg 37467444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 343
Target Start/End: Complemental strand, 46322211 - 46322127
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatat 343  Q
    ||||| |||| |||||||||||| ||  |  ||||||| |||||||||||| |||| |||||||||||| ||| |||||||||||    
T  46322211 aaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtatcaatacaaatat 46322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 372
Target Start/End: Original strand, 3785578 - 3785649
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||| ||  | ||  |||||||||||||||    
T  3785578 ttactttgaccatattttttaactaatatataaatacaaatgttagtatacaggatgttgtttgatttgtct 3785649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 49110674 - 49110607
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    ||||||||| ||||||||||||||||| ||| ||||||||| |||  |||||| | ||||||||||||    
T  49110674 ttactttgaccatattttttaactaatatattaatacaaatgttatgatgtaaaatattgtttgattt 49110607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 355
Target Start/End: Original strand, 7169184 - 7169238
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    |||||||||  |||||||||||||||| ||||||||||||||||| ||| |||||    
T  7169184 ttactttgactatattttttaactaatatataaatacaaatattaacatataaga 7169238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 38767265 - 38767223
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaat 341  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  38767265 acttactttgaccatattttttaactaatatataaatacaaat 38767223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 5529080 - 5529141
Alignment:
Q  312 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||||||| || ||||| |||| |||||||||||||  || |||||||||||||    
T  5529080 atattttttaactaatatacaaataaaaatgttagcatgtaagatgttatttgatttgtctc 5529141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 19120719 - 19120662
Alignment:
Q  316 tttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||| |||||||| |||||||||||||||||| |||| |||| |||||||    
T  19120719 tttttaattaatatataaatataaatattagcatgtaagatattggttgacttgtctc 19120662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 26161669 - 26161706
Alignment:
Q  316 tttttaactaatctataaatacaaatattagcatgtaa 353  Q
    |||||||||||| |||||||||||||||||||||||||    
T  26161669 tttttaactaatatataaatacaaatattagcatgtaa 26161706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 16870686 - 16870612
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| ||||||| ||||||||| |||||||| |||| || ||| |||| |  || |||||||||||||    
T  16870686 acttactttgaccatatttgttaactaatatataaatataaatgtttgcacgtaaaatgttatttgatttgtctc 16870612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 35570239 - 35570181
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||| || |||||||||| |||||||||||||  ||||  ||||||||||    
T  35570239 ttttttaactaatatacaaatacaaattttagcatgtaagatgttgtacgatttgtctc 35570181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 341
Target Start/End: Original strand, 42662243 - 42662284
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaat 341  Q
    |||||||||| |||| |||||||||||| |||||||||||||    
T  42662243 cttactttgaccatactttttaactaatatataaatacaaat 42662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 368
Target Start/End: Complemental strand, 4048927 - 4048871
Alignment:
Q  312 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    |||||||||||||||| |||||||||||||  |||| ||||||   |||||||||||    
T  4048927 atattttttaactaatatataaatacaaatgctagcttgtaagttgttgtttgattt 4048871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 24624187 - 24624073
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  24624187 aaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 24624088  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  24624087 tgtttgatttgtctc 24624073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 6563242 - 6563356
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| ||  || ||| ||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  6563242 aaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 6563341  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  6563342 tgtttgatttgtctc 6563356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 18668934 - 18668820
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||  |    
T  18668934 aaatacatgtccaatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgt 18668835  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  18668834 tgtttgatttgtctc 18668820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 20226544 - 20226430
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||| | |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| |    
T  20226544 aaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagacgt 20226445  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  20226444 tgtttgatttgtctc 20226430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 22120528 - 22120414
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||| | |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| |    
T  22120528 aaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagacgt 22120429  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  22120428 tgtttgatttgtctc 22120414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 19088204 - 19088090
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| || | |||||||||||| |||||||||||||||||||||||||||  |    
T  19088204 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaatattagcatgtaagatgt 19088105  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  19088104 tgtttgatttgtctc 19088090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 22054788 - 22054902
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||||||||||||  |  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  22054788 aaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 22054887  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  22054888 tgtttgatttgtctc 22054902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 32414925 - 32414811
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  32414925 aaatacatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 32414826  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  32414825 tgtttgatttgtctc 32414811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 12226022 - 12226105
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||| |||||||||| |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  12226022 attcactggacttattttgatcatactttttaactaatgtataaatataaatattagcatgtaagatattgtttgatttgtctc 12226105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 24955611 - 24955528
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||    
T  24955611 attcacttgacttattttgatcatattttttaactaatgaataaatacaaatattagcatgtaagatgttgtttgatttgtctc 24955528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 4147947 - 4148057
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  |  ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  4147947 aaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 4148046  T
Q  359 tgtttgatttg 369  Q
    |||||||||||    
T  4148047 tgtttgatttg 4148057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 32671832 - 32671946
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || |||||||  ||||||||||| |||| |||||||||||| ||||||||||||||||||| |||||||  |    
T  32671832 aaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgt 32671931  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  32671932 tgtttgatttgtctc 32671946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 3989509 - 3989396
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| | ||||||||| |||||||||||||||  |    
T  3989509 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgt-taaatacaactattagcatgtaagatgt 3989411  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  3989410 tgtttgatttgtctc 3989396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 15383176 - 15383062
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  |  ||||| | |||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||  |    
T  15383176 aaatacatgtccaatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaatattagcatgtaagatgt 15383077  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||| ||||    
T  15383076 tgtttgatttttctc 15383062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 17214018 - 17213916
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||| ||  || ||||| | ||||||||||||  ||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  17214018 aatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatacaaatattagcatgtaagatgttgtttgatttgt 17213919  T
Q  371 ctc 373  Q
    |||    
T  17213918 ctc 17213916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 372
Target Start/End: Complemental strand, 17257866 - 17257784
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    ||||||| |||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||  |||||||||||||||    
T  17257866 attcacttgacttactttgaccatactttttaactaatgtacaaatacaaatattagcatgtaagatgttgtttgatttgtct 17257784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 273 - 373
Target Start/End: Original strand, 1040854 - 1040954
Alignment:
Q  273 tttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    ||||||||| ||  || ||||||| || ||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||  |||||||||||||||    
T  1040854 tttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgtttgatttgtct 1040953  T
Q  373 c 373  Q
    |    
T  1040954 c 1040954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 369
Target Start/End: Complemental strand, 20437248 - 20437149
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcatatttttt-aactaatctataaatacaaatattagcatgtaagacattgtttgatttg 369  Q
    ||||||||||| ||  || ||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||||  ||||||||||||    
T  20437248 aatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaatacaaatatcaacatgtaagatgttgtttgatttg 20437149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 368
Target Start/End: Original strand, 29790237 - 29790331
Alignment:
Q  274 ttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    |||||||| |||||| ||||||  ||||||||| || |||| |||||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  29790237 ttttgcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatacaaatattagcatgtaagttgttgtttgattt 29790331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 15337544 - 15337598
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaa 353  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  15337544 acttactttgaccatattttttaactaatatataaatacaaatattagcatgtaa 15337598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 23158115 - 23158041
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| || |||||||||||||| ||||||||||||| ||| |||||||||  ||||||||||||||||    
T  23158115 acttactttgaccacattttttaactaatatataaatacaaatgttaacatgtaagatgttgtttgatttgtctc 23158041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 368
Target Start/End: Original strand, 28477784 - 28477878
Alignment:
Q  274 ttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    |||||||| || ||| ||||||  ||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  28477784 ttttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatattagcatgtaagttgttgtttgattt 28477878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 305 - 368
Target Start/End: Original strand, 5495311 - 5495374
Alignment:
Q  305 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||||  |||||||||||    
T  5495311 tttgatcatgttttttaactaatatataaatacaaatgttagcatgtaagattttgtttgattt 5495374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 10520484 - 10520598
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| || ||  ||||| | |||||||||||| ||||  | ||||||||| |||||||||| ||||||  |||||| |  |    
T  10520484 aaatacatgttcaatttttgcaatgtgtattattcatttgacttactttgaccatacctattaactaatgtataaatacagatattaatatgtaaaatgt 10520583  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  10520584 tgtttgatttgtctc 10520598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 355
Target Start/End: Complemental strand, 19240823 - 19240742
Alignment:
Q  274 ttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    |||||||| |||||| ||||||   ||||| ||||| ||||||||||||||||| |||||||||||||||| ||| ||||||    
T  19240823 ttttgcaatgtatactattcacataacttattttgaccatattttttaactaatatataaatacaaatatttgcaagtaaga 19240742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 29693914 - 29693994
Alignment:
Q  274 ttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaag 354  Q
    |||||||| || ||| ||||||  ||||| |||||| |||| |||||||||||| |||||||||||||| |||||||||||    
T  29693914 ttttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatactagcatgtaag 29693994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 3623913 - 3623845
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||   |||||||||||||||    
T  3623913 ttactttgaccatattttt-aactaatatataaatacaaatgttagcatgtaaga---tgtttgatttgtctc 3623845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 25476054 - 25475945
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  |  ||||||| |||||||||||| | || |||||||||||| ||||||||     ||||||||||||||  |    
T  25476054 aaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata-----attagcatgtaagatgt 25475960  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  25475959 tgtttgatttgtctc 25475945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 301 - 355
Target Start/End: Original strand, 31869766 - 31869820
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||    
T  31869766 ttactttgaccattttttttaactaatatataaatacaaatgttagcatgtaaga 31869820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 31569272 - 31569176
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||| |||| |||||||||||| ||  |  ||||||| ||||||||||||  ||| ||||| | |||| |||||||||||||||||| ||||||||    
T  31569272 aaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatgtaaga 31569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 372
Target Start/End: Original strand, 2360048 - 2360119
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    |||||||||  ||| |||||||||||| |||||||| |||| ||||||||||| |  |||||||||||||||    
T  2360048 ttactttgactataatttttaactaatatataaataaaaatgttagcatgtaaaatgttgtttgatttgtct 2360119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 370
Target Start/End: Original strand, 8101668 - 8101727
Alignment:
Q  311 catattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||  || ||||||||||    
T  8101668 catattttttaactaatatataaatacaaatgttaacatgtaagatgttatttgatttgt 8101727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 21540875 - 21540761
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||| ||||||| ||| ||  || ||||| | |||||||||||| |||| |||| ||||| | |||||||||||||||||  |||||| |  |    
T  21540875 aaatacatgtttaatttttacaatgtgcactattcatttgacttactttgaccatacttttaaactagtttataaatacaaatattataatgtaaaatgt 21540776  T
Q  359 tgtttgatttgtctc 373  Q
    | |||||||||||||    
T  21540775 tatttgatttgtctc 21540761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 10298778 - 10298725
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaa 353  Q
    |||| ||||| |||||||||| |||||| ||||||||||||| |||||||||||    
T  10298778 cttaatttgaccatattttttcactaatatataaatacaaatgttagcatgtaa 10298725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 355
Target Start/End: Original strand, 1260490 - 1260542
Alignment:
Q  303 actttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||| ||||||||||||||||| ||||||||||| | |||||| ||||||    
T  1260490 actttgaccatattttttaactaatatataaatacaattgttagcacgtaaga 1260542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 26567351 - 26567287
Alignment:
Q  299 acttactttgatcatatttttt-aactaatctataaatacaaatattagcatgtaagacattgtt 362  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||  |||||||||| || |||||    
T  26567351 acttactttgatcatatttttttaactaatatataaatataaatggtagcatgtaaaacgttgtt 26567287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 4440906 - 4440977
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||| |||| ||||||  |||  ||||||||||||| |||||||||||||  ||||| |||||||    
T  4440906 acttactttgaccatactttttaggtaacatataaatacaaatgttagcatgtaagatgttgttcgatttgt 4440977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 16193053 - 16193014
Alignment:
Q  334 atacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  16193053 atacaaatattagcatgtaagatgttgtttgatttgtctc 16193014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 355
Target Start/End: Original strand, 17155208 - 17155261
Alignment:
Q  302 tactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||||||| ||  |||||||  ||||||||||||| |||||||||||||    
T  17155208 tactttgatcatacttcataactaacatataaatacaaatgttagcatgtaaga 17155261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 5e-32; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 27334977 - 27334863
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  27334977 aaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 27334878  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  27334877 tgtttgatttgtctc 27334863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 13499581 - 13499467
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  13499581 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 13499482  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  13499481 tgtttgatttgtctc 13499467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 39866387 - 39866273
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  39866387 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 39866288  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  39866287 tgtttgatttgtctc 39866273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 42490442 - 42490328
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  42490442 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 42490343  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  42490342 tgtttgatttgtctc 42490328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 21005309 - 21005423
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||||||  || |||||||  ||||||||||| |||| ||||||| |||| |||||||| ||||||||||||||||||  |    
T  21005309 aaatacatgttcaatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatataaatattagcatgtaagatgt 21005408  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  21005409 tgtttgatttgtctc 21005423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 27010720 - 27010606
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| || | |||||||||||| |||||||||||||||||||||||||||  |    
T  27010720 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaatattagcatgtaagatgt 27010621  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  27010620 tgtttgatttgtctc 27010606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 370
Target Start/End: Complemental strand, 42761729 - 42761618
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  42761729 aaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 42761630  T
Q  359 tgtttgatttgt 370  Q
    ||||||||||||    
T  42761629 tgtttgatttgt 42761618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 6910350 - 6910464
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||| |||| ||| ||| || ||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||  |    
T  6910350 aaatacatgtccaacttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaaatattaacatgtaagatgt 6910449  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  6910450 tgtttgatttgtctc 6910464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 20765212 - 20765326
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| ||||||||||||  ||| |||||||||||| ||||||||||||||||| |||||||||  |    
T  20765212 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatattaacatgtaagatgt 20765311  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  20765312 tgtttgatttgtctc 20765326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 21797572 - 21797686
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| || ||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  21797572 aaatacatgtccaatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 21797671  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  21797672 tgtttgatttgtctc 21797686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 373
Target Start/End: Original strand, 36227567 - 36227675
Alignment:
Q  265 atgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttg 364  Q
    ||||||||||||||||| |   || ||||| | |||||||||||| ||||||||| || |||| |||||||||||||||||||||||||||  |||||||    
T  36227567 atgttcaatttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaatattagcatgtaagatgttgtttg 36227666  T
Q  365 atttgtctc 373  Q
    |||||||||    
T  36227667 atttgtctc 36227675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 30213851 - 30213934
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  30213851 attcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 30213934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 33415854 - 33415929
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  33415854 gacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 33415929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 38137840 - 38137955
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||||||||||  |||||||||  |  || |||| || || ||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||  |    
T  38137840 aaatatatgttcggtttttgcaatctgcactattcgcttgatttattttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgt 38137939  T
Q  359 tgtttgatttgtctct 374  Q
    ||||||||||||||||    
T  38137940 tgtttgatttgtctct 38137955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 373
Target Start/End: Complemental strand, 43467977 - 43467874
Alignment:
Q  270 caatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 369  Q
    |||||||||||| || ||| ||||||| |||||||||||| |||| ||||||||| || ||||||| | |||||||||| ||||||  ||||||||||||    
T  43467977 caatttttgcaatgtgtactattcacttgacttactttgaccatactttttaactgatgtataaattctaatattagcaggtaagatgttgtttgatttg 43467878  T
Q  370 tctc 373  Q
    ||||    
T  43467877 tctc 43467874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 372
Target Start/End: Original strand, 33803549 - 33803651
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcata-ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 369  Q
    ||||||||||| ||  || ||||||| |||||||||||| |||| ||||||||||||| |||||||| |||||||||| |||||||  ||||||||||||    
T  33803549 aatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattagcttgtaagatgttgtttgatttg 33803648  T
Q  370 tct 372  Q
    |||    
T  33803649 tct 33803651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 34912388 - 34912292
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||  |||||||    
T  34912388 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagattgtaaga 34912292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 368
Target Start/End: Original strand, 54507688 - 54507766
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    ||||||| |||||| |||||| ||| |||||||||||| |||||||||| ||||||||||||||||  |||||||||||    
T  54507688 attcacttgacttattttgattatactttttaactaatgtataaatacagatattagcatgtaagatgttgtttgattt 54507766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 15568135 - 15568067
Alignment:
Q  305 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||||||||||||| ||||||||||||| ||| | ||||||| ||||||| |||||||||    
T  15568135 tttgatcatattttttaactaatatataaatacaaatgttaccgtgtaagatattgttttatttgtctc 15568067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 373
Target Start/End: Complemental strand, 41751613 - 41751542
Alignment:
Q  302 tactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||| || ||  ||||||||| ||||||    
T  41751613 tactttgatcatattttttaactaatatataaatacaaatgttagcatttacgatgttgtttgatatgtctc 41751542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 15333007 - 15332938
Alignment:
Q  304 ctttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||| || |||||||||||||| ||||||||||||| |||||||||||||  |||||||||| |||||    
T  15333007 ctttgaccaaattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgattggtctc 15332938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 3430480 - 3430409
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||   | |||||||||||||||    
T  3430480 acttactttgaccatattttttaactaatatattaataaaaatattagcatgtaa---aatgtttgatttgtctc 3430409  T

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Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 43181571 - 43181487
Alignment:
Q  290 attcactcgacttactttgatcata-ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| || ||||||||| |||| ||||||||||||| |||||||| ||||||||| ||||||||  |||||| |||||||||    
T  43181571 attcacttgatttactttgaccatacttttttaactaatgtataaatataaatattagtatgtaagatgttgtttaatttgtctc 43181487  T

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Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 48334724 - 48334653
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| | ||| ||||||||||| | |||||||||||||||||||||||||||  ||||||||||||||||    
T  48334724 ttactttaaccattttttttaacta-tatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 48334653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 33128125 - 33128054
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||| |||||||||| ||||||||||||  ||||||| |||||||| ||||||||| ||||| ||||||||    
T  33128125 acttattttgatcatactttttaactaatacataaatataaatattaacatgtaagatattgtctgatttgt 33128054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 41252968 - 41252898
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||| | ||||||||||||||||| ||||||||||||| ||||||| |||||   |||||||||||||||    
T  41252968 cttactttaaccatattttttaactaatatataaatacaaatgttagcatataaga---tgtttgatttgtctc 41252898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 19823916 - 19823993
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaata 336  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| ||||||||    
T  19823916 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaata 19823993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 25527459 - 25527516
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||| || |||||||||||||| || ||||||||||||||||| |||||||||    
T  25527459 gacttacttcgaccatattttttaactgatatataaatacaaatattaacatgtaaga 25527516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 47164659 - 47164587
Alignment:
Q  299 acttactttgatcatattttttaactaatctat-aaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||| |||| ||||||||   |||||||||||||||    
T  47164659 acttactttaatcatattttttaactaatatataaaatacaaatgttagtatgtaaga---tgtttgatttgtctc 47164587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 17643800 - 17643852
Alignment:
Q  312 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttg 364  Q
    |||||||||||||||| | ||||||||||| ||||||||||||| ||||||||    
T  17643800 atattttttaactaatatgtaaatacaaatgttagcatgtaagatattgtttg 17643852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 52167271 - 52167339
Alignment:
Q  305 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||| |||| ||||||| |||| |||||||||||||||||  ||||||||  ||||||||||||||||    
T  52167271 tttgaccatactttttaattaatatataaatacaaatattaatatgtaagatgttgtttgatttgtctc 52167339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 370
Target Start/End: Original strand, 44561839 - 44561911
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    |||||||||||| |||| |||||||||||  ||||||||||||| ||  |||||||||  ||||| |||||||    
T  44561839 gacttactttgaccatactttttaactaacatataaatacaaatgttgacatgtaagatgttgttcgatttgt 44561911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 355
Target Start/End: Complemental strand, 15664150 - 15664095
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    |||| |||||||||||||||||| |||| ||||||||||||| |||  ||||||||    
T  15664150 cttaatttgatcatattttttaattaatatataaatacaaatgttactatgtaaga 15664095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 23940554 - 23940497
Alignment:
Q  313 tattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||||| |||||||| |||| ||| |||||||||   |||||||||||||||    
T  23940554 tattttttaactaatatataaataaaaatgttaacatgtaaga---tgtttgatttgtctc 23940497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 3017853 - 3017902
Alignment:
Q  305 tttgatcatattttttaactaatctataaatacaaatattagcatgtaag 354  Q
    ||||| ||||||||||||||| | ||||||||||||| ||||||| ||||    
T  3017853 tttgaccatattttttaactattatataaatacaaatgttagcatataag 3017902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 22786687 - 22786757
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    ||||||||||   ||||||||||||||| ||||||  ||||| || ||||||||||  |||||||||||||||    
T  22786687 cttactttgactctattttttaactaatatataaa--caaatgtttgcatgtaagatgttgtttgatttgtct 22786757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 41943283 - 41943344
Alignment:
Q  312 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||||||| | ||||||||||| |||  || |||||  ||||||||||||||||    
T  41943283 atattttttaactaatatttaaatacaaatgttaatatataagatgttgtttgatttgtctc 41943344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 23224346 - 23224306
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||||||| ||||||| |||||||||| ||||||||    
T  23224346 ttttttaactaatatataaatgcaaatattagaatgtaaga 23224306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 27813481 - 27813445
Alignment:
Q  312 atattttttaactaatctataaatacaaatattagca 348  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  27813481 atattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 5e-32; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 6223082 - 6223196
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| ||  || ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||       
T  6223082 aaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaagatga 6223181  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  6223182 tgtttgatttgtctc 6223196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 5405012 - 5405126
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  5405012 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 5405111  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  5405112 tgtttgatttgtctc 5405126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 7608065 - 7608179
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  7608065 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 7608164  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  7608165 tgtttgatttgtctc 7608179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 8042268 - 8042154
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  8042268 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 8042169  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  8042168 tgtttgatttgtctc 8042154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 19141312 - 19141198
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  19141312 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 19141213  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  19141212 tgtttgatttgtctc 19141198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 11841839 - 11841725
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||| | |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  11841839 aaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 11841740  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  11841739 tgtttgatttgtctc 11841725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 39358162 - 39358276
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  39358162 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 39358261  T
Q  359 tgtttgatttgtctc 373  Q
    | |||||||||||||    
T  39358262 tctttgatttgtctc 39358276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 44365173 - 44365287
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||||||||||||  |  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  44365173 aaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 44365272  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  44365273 tgtttgatttgtctc 44365287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 13125360 - 13125277
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||    
T  13125360 attcacttgacttactttcaccatattttttaactaatgtataaatacaaatattagcatctaagatattgtttgatttgtctc 13125277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 2183203 - 2183092
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| ||| |||||||||||||||||||||||       
T  2183203 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaaatattagcatgtaaga--- 2183107  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  2183106 tgtttgatttgtctc 2183092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 36072229 - 36072304
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||  || |||||||||||||    
T  36072229 gacttactttgatcatattttttaactaatgtataaatataaatattagcatgtaagatgttatttgatttgtctc 36072304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 373
Target Start/End: Original strand, 7799876 - 7799977
Alignment:
Q  272 atttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtc 371  Q
    |||||||||| ||  || ||||||  |||||||||||| | || |||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||    
T  7799876 atttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtc 7799975  T
Q  372 tc 373  Q
    ||    
T  7799976 tc 7799977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 19262736 - 19262792
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  19262736 acttactttgaccatattttttaactaatatataaatacaaatattagcatgtaaga 19262792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 11931747 - 11931818
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||  |||||||||||||    
T  11931747 acttactttgaccatattttttaactaatatataaatacaaatgttagcatttaagatgttgtttgatttgt 11931818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 369
Target Start/End: Complemental strand, 9172352 - 9172282
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttg 369  Q
    ||||||||||| ||||||||||||||||| ||||||||||||  |||||||||||||  ||||||||||||    
T  9172352 acttactttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatgttgtttgatttg 9172282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 38292008 - 38292082
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| ||||||||||||||| | ||||||||||||| ||| |||||||||  ||||||||||||||||    
T  38292008 acttactttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatgttgtttgatttgtctc 38292082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 24252016 - 24252089
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  24252016 acttattttgaccatattttttaactaatatataaatacaaatgttagcatgtaa-atgttgtttgatttgtctc 24252089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 31610843 - 31610785
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||    
T  31610843 ttttttaactaatatataaatacaaatgttagaatgtaagacgttgtttgatttgtctc 31610785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 301 - 355
Target Start/End: Original strand, 42133810 - 42133864
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  42133810 ttactttgatcatattttttaactaatatataaatacaaatgttagcatgaaaga 42133864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 355
Target Start/End: Complemental strand, 43444741 - 43444690
Alignment:
Q  304 ctttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||||||||||    
T  43444741 ctttgaccatattttttaactaatatataaatacaaatgttagcatgtaaga 43444690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 350
Target Start/End: Complemental strand, 9006989 - 9006939
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatg 350  Q
    |||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  9006989 cttactttgaccatattttttaactaatttataaatacaaatgttagcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 22839133 - 22839059
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| ||||||||||||||| | |||||||  |||| ||||||| |||||  ||||||||||||||||    
T  22839133 acttactttgaccatattttttaactagtatataaattaaaatgttagcatataagatgttgtttgatttgtctc 22839059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 372
Target Start/End: Original strand, 32774646 - 32774720
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    |||||||||||| |||| |||||||||||| |||| ||| ||||||||  ||||||||  |||||||||||||||    
T  32774646 gacttactttgaccatactttttaactaatatatacatataaatattaatatgtaagatgttgtttgatttgtct 32774720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 36719565 - 36719456
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||||    || ||||||| |||||||||||| |||| ||||||| ||     ||||||||||||||||||| |||||  |    
T  36719565 aaatacatgtccaatttttgcaacaagcactattcacttgacttactttgaccatactttttaagta-----taaatacaaatattagcatttaagatgt 36719471  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  36719470 tgtttgatttgtctc 36719456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 13117530 - 13117457
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    ||||||||||| |||||||||||||| || |||||||| ||||||||| || |||||  ||||| |||||||||    
T  13117530 acttactttgaccatattttttaactgatatataaatataaatattagtatctaagatgttgttcgatttgtct 13117457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 33607392 - 33607502
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||| | ||||||||||||| ||| |||||||||||| |||||||||||||||    ||||||||  |    
T  33607392 aaatacatgtccaatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaatat----atgtaagatgt 33607487  T
Q  359 tgtttgatttgtctc 373  Q
    ||||| |||||||||    
T  33607488 tgttttatttgtctc 33607502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 44644927 - 44644999
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    |||||||||| |||| |||||||||||| |||||||| |||||||| ||| |||||  |||||| ||||||||    
T  44644927 cttactttgaccatactttttaactaatatataaatataaatattaacatataagatgttgtttaatttgtct 44644999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 38839136 - 38839203
Alignment:
Q  306 ttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||| |||||  |||| |||||| ||||    
T  38839136 ttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgtatgatttctctc 38839203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 354
Target Start/End: Original strand, 16865109 - 16865165
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaag 354  Q
    ||||||||||||  ||| |||||||||||  ||||||||||||| ||||||||||||    
T  16865109 gacttactttgacgatactttttaactaacatataaatacaaatgttagcatgtaag 16865165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 355
Target Start/End: Complemental strand, 31904085 - 31904030
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    |||||| ||| ||||||||||||||||| |||||||| |||||||| || ||||||    
T  31904085 cttactctgaccatattttttaactaatatataaatataaatattatcacgtaaga 31904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 9553926 - 9553853
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| |  |||||||||||||| ||||||| ||||||||| ||||||| |  ||||| ||||||||||    
T  9553926 acttactttgaccgcattttttaactaatatataaat-caaatattaacatgtaaaatgttgttcgatttgtctc 9553853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 44563204 - 44563150
Alignment:
Q  299 acttactttgatcatatt-ttttaactaatctataaatacaaatattagcatgta 352  Q
    |||||||||||||||||| |||||| |||| |||||||||| || ||||||||||    
T  44563204 acttactttgatcatatttttttaattaatatataaatacatatgttagcatgta 44563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 3837311 - 3837271
Alignment:
Q  313 tattttttaactaatctataaatacaaatattagcatgtaa 353  Q
    ||||||||||||||| |||||||| |||||| |||||||||    
T  3837311 tattttttaactaatatataaatataaatatcagcatgtaa 3837271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 978093 - 978207
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  978093 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 978192  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  978193 tgtttgatttgtctc 978207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 3472523 - 3472411
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| ||  || ||| ||| |||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||  |    
T  3472523 aaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgtaagatgt 3472424  T
Q  359 tgtttgatttgtc 371  Q
    |||||||||||||    
T  3472423 tgtttgatttgtc 3472411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 9502873 - 9502759
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||| ||||||||||| ||  || ||||| | |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  9502873 aaatacatgtttaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 9502774  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  9502773 tgtttgatttgtctc 9502759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 33387236 - 33387350
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| ||||||||||||  ||| |||||||||||| |||||||||||||||||||||||||||  |    
T  33387236 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatattagcatgtaagatgt 33387335  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  33387336 tgtttgatttgtctc 33387350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 33587715 - 33587601
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  |  ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||  |    
T  33587715 aaatacatgtccaatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaaatattaacatgtaagatgt 33587616  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  33587615 tgtttgatttgtctc 33587601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 11785972 - 11785857
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatac-aaatattagcatgtaagaca 357  Q
    ||||| ||||| ||||||||||| || ||| ||||||| ||||||||||||||||| |||||||||||| ||||||||| |||||||| |||||||||      
T  11785972 aaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaatacaaaatattaccatgtaagatg 11785873  T
Q  358 ttgtttgatttgtctc 373  Q
    ||||||| ||||||||    
T  11785872 ttgtttggtttgtctc 11785857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 8086276 - 8086162
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| ||||||||||||  ||| |||||||||||| ||||||||||||||||| |||||||||  |    
T  8086276 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatattaacatgtaagatgt 8086177  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  8086176 tgtttgatttgtctc 8086162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 14634403 - 14634289
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || | ||||| ||||||||||||  ||| |||||||||||| |||||||||||||||||||||||||||  |    
T  14634403 aaatacatgtccaatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattagcatgtaagatgt 14634304  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  14634303 tgtttgatttgtctc 14634289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 7224181 - 7224295
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||| ||||||||| || ||| ||| | | |||||||||||| |||| ||| |||||||| ||||||||||||||||||||||||| |  |    
T  7224181 aaatacatgttcattttttgcaatgtgtactatttaattgacttactttgaccatactttctaactaatttataaatacaaatattagcatgtaaaatgt 7224280  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  7224281 tgtttgatttgtctc 7224295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 18094327 - 18094213
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| ||  |  |||||||  ||||||||| || ||| |||||||||||| |||||||||||||||||||||||||||  |    
T  18094327 aaatacatgttcaatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaatacaaatattagcatgtaagatgt 18094228  T
Q  359 tgtttgatttgtctc 373  Q
    |||||| ||||||||    
T  18094227 tgtttggtttgtctc 18094213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 24992343 - 24992270
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  24992343 cttactttgaccatattttttaactaatttataaatacaaatattagcatataagatgttgtttgatttgtctc 24992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 373
Target Start/End: Original strand, 11761125 - 11761196
Alignment:
Q  302 tactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||    
T  11761125 tactttgaccatattttttaactaatatataaatacaaatattaacatgtaagatgttgtttgatttgtctc 11761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 40156245 - 40156328
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||||||| | |||| ||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  40156245 attcacttgacttacttttaccataatttttaattaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 40156328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 299 - 355
Target Start/End: Original strand, 32017269 - 32017325
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  32017269 acttactttgatcatattttttaactaatatataaatacaaatgttagcatgtaaga 32017325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 11251130 - 11251244
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||||||||  || |||||||| ||  || ||||||| |||||| ||||| |||| |||||||||||| |||||||||||||||||||||||| ||  |    
T  11251130 aaatatatgtctaacttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtacgatgt 11251229  T
Q  359 tgtttgatttgtctc 373  Q
    | |||||||| ||||    
T  11251230 tatttgatttatctc 11251244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 30355120 - 30355006
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||||||||||||  |  || ||||||| || ||||||| | ||||  ||||||||||| |||||||||||||||||||||||||||  |    
T  30355120 aaatacatgtccaatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaatattagcatgtaagatgt 30355021  T
Q  359 tgtttgatttgtctc 373  Q
    ||||| |||||||||    
T  30355020 tgtttaatttgtctc 30355006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 355
Target Start/End: Original strand, 34111992 - 34112074
Alignment:
Q  273 tttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||| ||  || ||||||| ||||||||||||  ||||||||| |||||||||||||||||||||||| |||||||||    
T  34111992 tttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaatacaaatattatcatgtaaga 34112074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 9050765 - 9050708
Alignment:
Q  316 tttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  9050765 tttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 9050708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 12456846 - 12456773
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    ||||||||| ||||||||||||||||||| || |||||||||| |||| ||||||||  |||||||||||||||    
T  12456846 acttactttaatcatattttttaactaatatacaaatacaaatgttagtatgtaagatgttgtttgatttgtct 12456773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 24916453 - 24916378
Alignment:
Q  300 cttactttgatcatatttttt--aactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||| ||||||||||  ||||||| ||||||||||||||||||||| |||||  ||||||||||||||||    
T  24916453 cttactttgaccatattttttttaactaatttataaatacaaatattagcatataagatgttgtttgatttgtctc 24916378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 27109744 - 27109818
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||| ||| ||||||| |||| || ||||||||||||||||||||||||  ||||||||||||||||    
T  27109744 gacttactttgat-atactttttaattaatgtaaaaatacaaatattagcatgtaagatgttgtttgatttgtctc 27109818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 27579637 - 27579562
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||| |  |||||||||||||||| ||||||||||||| ||||||||||||| ||  |||||||||||||    
T  27579637 gacttactttaactatattttttaactaatatataaatacaaatgttagcatgtaagatataatttgatttgtctc 27579562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 12360011 - 12359953
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||| ||||||||||||| |||||||| |||| |||||||||||||||||    
T  12360011 ttttttaactaatatataaatacaaatgttagcatgaaagatattgtttgatttgtctc 12359953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 32400399 - 32400457
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||    
T  32400399 ttttttaactaatatataaatacaaatattagcatgtaagatgttgtttaatttgtctc 32400457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 18998745 - 18998814
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||| | ||||||||||||||||| ||||||||||||| |||| ||||||||  |||||||||||||    
T  18998745 ttactttaaccatattttttaactaatatataaatacaaatgttagtatgtaagatgttgtttgatttgt 18998814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 37495667 - 37495712
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatatta 345  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  37495667 cttactttgatcatattttttaactaatatataaatacaaatatta 37495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 12447623 - 12447550
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||| |||| |||||||||||| | ||||||||  |||||||||||||||  ||||||||||||||||    
T  12447623 gacttactttgaccatactttttaactaatgtttaaataca--tattagcatgtaagatgttgtttgatttgtctc 12447550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 367
Target Start/End: Complemental strand, 26387084 - 26387017
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatt 367  Q
    |||||||||||||||||||||||||||  |||||||| |||| ||||||| |||||  ||||||||||    
T  26387084 cttactttgatcatattttttaactaacatataaatataaatgttagcatttaagatgttgtttgatt 26387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 3422400 - 3422343
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtct 372  Q
    ||||||||||||| ||||||||||||| |||||||||||||  ||| |||||||||||    
T  3422400 ttttttaactaatatataaatacaaatgttagcatgtaagatgttgattgatttgtct 3422343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 6996049 - 6996110
Alignment:
Q  312 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||||||| |||||||| |||| ||| ||||||| | |||||||||||||||||    
T  6996049 atattttttaactaatatataaatataaatgttaccatgtaaaatattgtttgatttgtctc 6996110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 353
Target Start/End: Original strand, 39776659 - 39776740
Alignment:
Q  272 atttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaa 353  Q
    |||||||||| ||| || ||||||   ||||| ||||| | || |||||||||||  |||||||||||||||||||||||||    
T  39776659 atttttgcaatgtacactattcacataacttattttgaccgtactttttaactaacatataaatacaaatattagcatgtaa 39776740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 352
Target Start/End: Original strand, 13812113 - 13812156
Alignment:
Q  309 atcatattttttaactaatctataaatacaaatattagcatgta 352  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||    
T  13812113 atcatattttttaactaatatatcaatacaaatattagtatgta 13812156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 341
Target Start/End: Original strand, 4671265 - 4671307
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaat 341  Q
    |||||||||| ||||||||||||||| || |||||||||||||    
T  4671265 acttactttgttcatattttttaactgatatataaatacaaat 4671307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 7749918 - 7749869
Alignment:
Q  324 taatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||| |||||||| |||| ||||||||||||| ||||||| |||||||||    
T  7749918 taatatataaatagaaatgttagcatgtaagatattgtttaatttgtctc 7749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 38916457 - 38916404
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgt 351  Q
    ||||| |||||| |||| |||||||||||  ||||||||||||| |||||||||    
T  38916457 gacttgctttgaccatactttttaactaacatataaatacaaatgttagcatgt 38916404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 370
Target Start/End: Complemental strand, 12007839 - 12007767
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    |||||| ||||| | || ||||||| |||| |||||||||||||  |||||||||| |  |||||||||||||    
T  12007839 gacttaatttgaccctactttttaattaatatataaatacaaatgctagcatgtaaaatgttgtttgatttgt 12007767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 43967739 - 43967853
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| ||||||||||||||||| ||  || ||| ||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  43967739 aaatacatgttcaatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 43967838  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  43967839 tgtttgatttgtctc 43967853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 26125755 - 26125838
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  26125755 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 26125838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 259 - 370
Target Start/End: Complemental strand, 38416896 - 38416785
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  38416896 aaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 38416797  T
Q  359 tgtttgatttgt 370  Q
    ||||||||||||    
T  38416796 tgtttgatttgt 38416785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 45291879 - 45291962
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  45291879 attcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 45291962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 47386501 - 47386418
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  47386501 attcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 47386418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 25296814 - 25296712
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  25296814 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgt 25296715  T
Q  371 ctc 373  Q
    |||    
T  25296714 ctc 25296712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 26170002 - 26170116
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| || ||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  26170002 aaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 26170101  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  26170102 tgtttgatttgtctc 26170116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 44232311 - 44232209
Alignment:
Q  271 aatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  44232311 aatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgt 44232212  T
Q  371 ctc 373  Q
    |||    
T  44232211 ctc 44232209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 2760973 - 2760862
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||       
T  2760973 aaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaaga--- 2760877  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  2760876 tgtttgatttgtctc 2760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 29830390 - 29830473
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  29830390 attcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgtttgatttgtctc 29830473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 373
Target Start/End: Complemental strand, 54330937 - 54330822
Alignment:
Q  258 gaaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagaca 357  Q
    |||||| |||| |||||||||||| ||   | ||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||      
T  54330937 gaaatacatgtccaatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 54330838  T
Q  358 ttgtttgatttgtctc 373  Q
    ||||||||||| ||||    
T  54330837 ttgtttgatttatctc 54330822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 12240424 - 12240310
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||| | |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  12240424 aaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 12240325  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  12240324 tgtttgatttgtctc 12240310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 12625267 - 12625381
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||||||||||||||||  |  || |||||   |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  12625267 aaatacatgttcaatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 12625366  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  12625367 tgtttgatttgtctc 12625381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 17610296 - 17610410
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||||||||||||  |  || ||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||  |    
T  17610296 aaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaatattagcatgtaagatgt 17610395  T
Q  359 tgtttgatttgtctc 373  Q
    ||||| |||||||||    
T  17610396 tgtttaatttgtctc 17610410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 50181100 - 50181190
Alignment:
Q  283 gtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||| || | ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  50181100 gtataccattaacacaacttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctc 50181190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 55209820 - 55209706
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||||| || ||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  55209820 aaatacatgtccaatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 55209721  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  55209720 tgtttgatttgtctc 55209706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 31010269 - 31010344
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||| |||| |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||    
T  31010269 gacttactttgaccatactttttaactaatgtataaataaaaatattagcatgtaagatattgtttgatttgtctc 31010344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 9029655 - 9029581
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| |||| |||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  9029655 acttactttgaccatactttttaactaatgtataaatacaaatattagcacgtaagatattgtttgatttgtctc 9029581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 19433608 - 19433490
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatat----tttttaactaatctataaatacaaatattagcatgtaag 354  Q
    ||||| ||||||||||||||||| ||  ||  |||||| |||||||||||| |||||    |||||||||| | ||||||||||||||||||||||||||    
T  19433608 aaatacatgttcaatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaatacaaatattagcatgtaag 19433509  T
Q  355 acattgtttgatttgtctc 373  Q
    |  ||||||||||||||||    
T  19433508 atgttgtttgatttgtctc 19433490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 3037035 - 3037110
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||    
T  3037035 gacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaaaatattatttgatttgtctc 3037110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 366
Target Start/End: Complemental strand, 35381140 - 35381033
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||| ||| ||  || ||||| | |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||  |    
T  35381140 aaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgt 35381041  T
Q  359 tgtttgat 366  Q
    ||||||||    
T  35381040 tgtttgat 35381033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 14144663 - 14144589
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||| ||||||||  ||||||||||||||||    
T  14144663 acttactttgaccacattttttaactaatatataaatacaaatattagtatgtaagatgttgtttgatttgtctc 14144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 17446879 - 17446765
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    |||||||||| |||||||| ||| ||  || ||||| | |||| ||||||| ||||  ||||||||||| ||||||||||||||||| |||||||||  |    
T  17446879 aaatatatgtccaatttttacaatgtgcactattcatttgactaactttgaccatacattttaactaatgtataaatacaaatattaacatgtaagatgt 17446780  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  17446779 tgtttgatttgtctc 17446765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 55191840 - 55191954
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||||||||||||||||||||| ||  || ||||| | ||||||||||||  ||| ||||||| |||| | |||||||||||||||||||| || |  |    
T  55191840 aaatatatgttcaatttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaaatattagcatgcaaaatgt 55191939  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  55191940 tgtttgatttgtctc 55191954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 350
Target Start/End: Original strand, 55800859 - 55800941
Alignment:
Q  268 ttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatg 350  Q
    |||||||||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  55800859 ttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 355
Target Start/End: Original strand, 54610878 - 54610975
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtatacc-attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||||| ||||||||||| ||| ||  ||||||| |||||||||| |||||||||||||| |||| |||||||||| ||||||| ||||||||    
T  54610878 aaatatatgtttaatttttgcaatgtacacttattcacttgacttactttaatcatattttttaattaatgtataaatacagatattagtatgtaaga 54610975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 355
Target Start/End: Original strand, 35686389 - 35686485
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||| |||| |||||||||||| ||  || |||||||  ||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||    
T  35686389 aaatacatgtccaatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaatattatcatgtaaga 35686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 4467726 - 4467651
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||| ||||||  ||| |||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  4467726 gacttgctttgactatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttgatttgtctc 4467651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 25918219 - 25918333
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| |||||||||||| ||  || ||||||| || ||| ||||| | || |||||||| ||| |||||||| ||||||||||||||||||  |    
T  25918219 aaatacatgtccaatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatattagcatgtaagatgt 25918318  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  25918319 tgtttgatttgtctc 25918333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 50620928 - 50620814
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    |||||||||| ||||||| ||||  |  || |||||||  ||||||||||| ||||  ||||||||||| ||||||||| |||||||||||||||||  |    
T  50620928 aaatatatgtccaattttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaatattagcatgtaagatgt 50620829  T
Q  359 tgtttgatttgtctc 373  Q
    | |||||||||||||    
T  50620828 tttttgatttgtctc 50620814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 7614670 - 7614739
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatt 367  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||    
T  7614670 gacttattttgaccatattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatt 7614739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 19903854 - 19903785
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||    
T  19903854 ttactttgaccatatattttaactaatatataaatacaaatgttagcatgtgagatattgtttgatttgt 19903785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 38716941 - 38716998
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  38716941 gacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaga 38716998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 370
Target Start/End: Original strand, 19595752 - 19595832
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||| |||||||||| | |||| | |||||||||| ||||||||||||||||||||||||| |  |||||||||||||    
T  19595752 attcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgtaatattttgtttgatttgt 19595832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 55091391 - 55091319
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||||||||||| |||| ||||||||||||| |||| ||||||||  ||||||||||||||||    
T  55091391 ttactttcatcatattttttaattaatatataaatacaaatgttagtatgtaagatgttgtttgatttgtctc 55091319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 50205798 - 50205873
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||  ||||||  ||||||||||| ||||    
T  50205798 gacttactttgaccatactttttaactaatatataaatacaaatattagctcgtaagatgttgtttgatttatctc 50205873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 312 - 373
Target Start/End: Complemental strand, 2571075 - 2571014
Alignment:
Q  312 atattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| ||  |||||||||||||    
T  2571075 atattttttaactaatatataaatacaaatgttagcatgtaagatataatttgatttgtctc 2571014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 38721392 - 38721449
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  38721392 gacttattttgatcatattttttaacaaatatataaatacaaatgttagcatgtaaga 38721449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 37767165 - 37767090
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||  ||| ||||||||  || ||||||||||||| |||| |||||||| |||||||||||||||||    
T  37767165 gacttactttgactatactttttaacgtatatataaatacaaatgttagaatgtaagatattgtttgatttgtctc 37767090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 53304481 - 53304535
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaa 353  Q
    ||||||||||||||||||||| ||||||| || ||||| ||||||||||||||||    
T  53304481 acttactttgatcatatttttaaactaatatacaaatataaatattagcatgtaa 53304535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 27407825 - 27407749
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagca--tgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| | || |||||||||||| ||||||||||||||||||||  |||||||  |||||||| |||||||    
T  27407825 acttactttgaccctactttttaactaatatataaatacaaatattagcatgtgtaagatgttgtttgagttgtctc 27407749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 20875451 - 20875379
Alignment:
Q  301 ttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||| ||||||||||||||||| |||||||  |||| || |||| |||||  ||||||||||||||||    
T  20875451 ttactttgaccatattttttaactaatatataaatgtaaatgtttgcatataagatgttgtttgatttgtctc 20875379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 29051740 - 29051793
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaag 354  Q
    ||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||    
T  29051740 acttactttgaccatattttttaactaatatataaatacaa--attagcatgtaag 29051793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 370
Target Start/End: Complemental strand, 32871574 - 32871494
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||| |||||  ||||||||||||||||||||||| | ||||||||||| | || ||||| ||  |||||||||||||    
T  32871574 attcacttgacttgttttgatcatattttttaactaatatgtaaatacaaatgtaagtatgtaggatgttgtttgatttgt 32871494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 39307751 - 39307826
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||||  || |||||||||||| ||||||||||||| |||| |||||| |  |||||| |||||||||    
T  39307751 gacttactttgatgctactttttaactaatatataaatacaaatgttagtatgtaaaatgttgtttaatttgtctc 39307826  T

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Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 368
Target Start/End: Complemental strand, 36523175 - 36523105
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgattt 368  Q
    ||||||||||||  ||| |||||||||||| ||||||||||||| ||| |||||||||  ||||| |||||    
T  36523175 gacttactttgactatactttttaactaatatataaatacaaatgttaacatgtaagatgttgttcgattt 36523105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 372
Target Start/End: Original strand, 50815017 - 50815091
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagaca-ttgtttgatttgtct 372  Q
    ||||||||||||  |||||||||||| || ||||||||||||||||| | |||| || | |||||||||||||||    
T  50815017 acttactttgattttattttttaacttatatataaatacaaatattaacgtgtatgatatttgtttgatttgtct 50815091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 355
Target Start/End: Original strand, 34316576 - 34316632
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga 355  Q
    ||||||||||||||||||| || ||||||| ||||||||||||| ||||||| |||||    
T  34316576 gacttactttgatcatattgtt-aactaatatataaatacaaatgttagcatataaga 34316632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 10550498 - 10550553
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||||| |||||||| |||| |||||||||||||   |||||||||||||||    
T  10550498 ttttttaactaatatataaataaaaatgttagcatgtaaga---tgtttgatttgtctc 10550553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 34652280 - 34652208
Alignment:
Q  272 atttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatatt 344  Q
    ||||||| || || ||| ||| || |||||||||| || ||||||||||||||||  ||||||||||||||||    
T  34652280 atttttgtaatgtgtactatttacacgacttacttcgaccatattttttaactaacatataaatacaaatatt 34652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 56297902 - 56297834
Alignment:
Q  305 tttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||| ||||||| ||||||||| ||||||||||||| ||||||| ||| |  |||| |||||||||||    
T  56297902 tttgaccatatttattaactaatatataaatacaaatgttagcatataaaatgttgtctgatttgtctc 56297834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 370
Target Start/End: Complemental strand, 27344138 - 27344083
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||||||||| |||||||| |||||||| ||| |||||  |||||||||||||    
T  27344138 ttttttaactaatatataaataaaaatattaacatataagatgttgtttgatttgt 27344083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 30446353 - 30446427
Alignment:
Q  298 gacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||||| | ||||||| | ||||| ||||||||||||| ||||| ||||| |  ||||||||||||||||    
T  30446353 gacttactttgaccctatttttga-ctaatatataaatacaaatgttagcctgtaaaatgttgtttgatttgtctc 30446427  T

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Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 51456556 - 51456506
Alignment:
Q  302 tactttgatcatattttttaactaatctataaatacaaatattagcatgtaa 353  Q
    |||||| ||||||||||| ||||||| ||||||||||||| |||||||||||    
T  51456556 tactttcatcatattttt-aactaatatataaatacaaattttagcatgtaa 51456506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 30191649 - 30191605
Alignment:
Q  329 tataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||| |||| ||| ||||||||| |||||||||||||||||    
T  30191649 tataaatataaatgttaacatgtaagatattgtttgatttgtctc 30191605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 43968232 - 43968272
Alignment:
Q  305 tttgatcatattttttaactaatctataaatacaaatatta 345  Q
    ||||||| ||||||||||||||| ||||||| |||||||||    
T  43968232 tttgatcgtattttttaactaatatataaatgcaaatatta 43968272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 100893 - 100779
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||||||| |||||||| ||  || ||||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||| |||||||  |    
T  100893 aaatacatgttcaacttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaagatgt 100794  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  100793 tgtttgatttgtctc 100779  T

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Target: scaffold0608 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 1560 - 1650
Alignment:
Q  283 gtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||||| || | ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  1560 gtataccattaacacaacttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgttcgatttgtctc 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 68015 - 67901
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||||||||| || ||  || ||||| | |||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||  |    
T  68015 aaatacatgtccaatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgt 67916  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  67915 tgtttgatttgtctc 67901  T

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Target: scaffold0295 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 13932 - 13849
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||  |||||| |||||||||    
T  13932 attcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgtaagatgttgtttaatttgtctc 13849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 9039 - 8965
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  9039 acttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 8965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 70977 - 71090
Alignment:
Q  259 aaatatatgttcaatttttgcaacgtataccattcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacat 358  Q
    ||||| |||| ||||||||||||  |  || ||||||| |||||| ||||| |||||||| |||||||| ||||||||||||||||||||| |||||  |    
T  70977 aaatacatgtccaatttttgcaatatgcactattcacttgacttattttgaccatatttt-taactaatgtataaatacaaatattagcatttaagatgt 71075  T
Q  359 tgtttgatttgtctc 373  Q
    |||||||||||||||    
T  71076 tgtttgatttgtctc 71090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 138236 - 138162
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||    
T  138236 acttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 138162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 370
Target Start/End: Complemental strand, 162052 - 161972
Alignment:
Q  290 attcactcgacttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    ||||||| ||||||| |||| |||| |||||||||||| |||||||||||||||||||||||||||  |||||| ||||||    
T  162052 attcacttgacttacattgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtttaatttgt 161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 4005 - 4079
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga-cattgtttgatttgtctc 373  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||  ||| |||||||||||||    
T  4005 cttactttgaccatattttttaactaatatataaatacaaatgttagcatgtaagattattttttgatttgtctc 4079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 372
Target Start/End: Complemental strand, 28857 - 28784
Alignment:
Q  300 cttactttgatcatattttttaactaatctataaatacaaatattagcatgtaaga-cattgtttgatttgtct 372  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||   |||||||||||||||    
T  28857 cttactttgaccatattttttaactaatttataaatacaaatattagcatataagatgtttgtttgatttgtct 28784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 53626 - 53555
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgt 370  Q
    |||| |||||||||||||||||||||||| ||||| ||||||| |||||||| ||||  |||||||||||||    
T  53626 acttgctttgatcatattttttaactaatatataattacaaattttagcatgcaagatgttgtttgatttgt 53555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 217065 - 217007
Alignment:
Q  315 ttttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    |||||||| |||| ||||||||||||| ||||||| |||||  ||||||||||||||||    
T  217065 ttttttaagtaatatataaatacaaatgttagcatataagatgttgtttgatttgtctc 217007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 22836 - 22910
Alignment:
Q  299 acttactttgatcatattttttaactaatctataaatacaaatattagcatgtaagacattgtttgatttgtctc 373  Q
    ||||| ||||| || ||||||||||| || ||||||||||||| |||||||||||||  ||||||||||||||||    
T  22836 acttattttgaccacattttttaactcatatataaatacaaatgttagcatgtaagatgttgtttgatttgtctc 22910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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