View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261_low_23 (Length: 314)
Name: NF10261_low_23
Description: NF10261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 57 - 265
Target Start/End: Complemental strand, 28557664 - 28557455
Alignment:
| Q |
57 |
agggaaacaaactaagtcttctccgtaaacaatttgttaagaggccaatataaattgctagttaaatccaacttgcttaatataaagataataaggaatg |
156 |
Q |
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| T |
28557664 |
agggaaacaaactaagtcttctctgtaaacaatttgttaagaggccaatataaattgctagttaaatccaacttgctcaatataaagataataaggaatg |
28557565 |
T |
|
| Q |
157 |
accnnnnnnnttaacaaattcttcttaatttattttccaattaatttcactttgtcgtctgaaagaatattctcttga-taactgtagttgaagaaggag |
255 |
Q |
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| T |
28557564 |
accaaaaaaattaacaaattcttcttaatttattttccaattaatttcactttgtcgtctgaaagaatattctcttgattaactgtagttgaagaaggag |
28557465 |
T |
|
| Q |
256 |
tactcttaac |
265 |
Q |
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| T |
28557464 |
tactcttaac |
28557455 |
T |
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