View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10261_low_33 (Length: 249)

Name: NF10261_low_33
Description: NF10261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10261_low_33
NF10261_low_33
[»] chr5 (22 HSPs)
chr5 (1-183)||(40148526-40148708)
chr5 (5-183)||(39519025-39519203)
chr5 (1-183)||(6511920-6512102)
chr5 (1-183)||(20180438-20180620)
chr5 (5-183)||(39523664-39523842)
chr5 (1-183)||(37248084-37248265)
chr5 (1-183)||(12103656-12103838)
chr5 (1-150)||(26667941-26668090)
chr5 (1-150)||(26939538-26939687)
chr5 (1-150)||(36424301-36424450)
chr5 (1-154)||(29167257-29167410)
chr5 (1-154)||(6154717-6154870)
chr5 (1-150)||(7452416-7452565)
chr5 (1-139)||(37537222-37537360)
chr5 (1-139)||(37646341-37646479)
chr5 (26-177)||(16115541-16115692)
chr5 (61-178)||(35779931-35780047)
chr5 (141-183)||(35679311-35679353)
chr5 (27-179)||(15414207-15414358)
chr5 (136-183)||(4872531-4872578)
chr5 (141-180)||(9726176-9726215)
chr5 (17-60)||(36430272-36430315)
[»] chr4 (27 HSPs)
chr4 (1-180)||(31274147-31274326)
chr4 (1-183)||(37263847-37264029)
chr4 (1-183)||(37259147-37259329)
chr4 (1-180)||(16421675-16421854)
chr4 (1-183)||(51698552-51698734)
chr4 (5-182)||(55252297-55252474)
chr4 (1-179)||(33462641-33462825)
chr4 (1-180)||(32220850-32221029)
chr4 (1-180)||(12823171-12823350)
chr4 (1-183)||(33468285-33468468)
chr4 (7-176)||(32081458-32081625)
chr4 (1-157)||(31766528-31766684)
chr4 (1-150)||(5270707-5270856)
chr4 (1-150)||(8694376-8694525)
chr4 (1-150)||(5927501-5927650)
chr4 (26-180)||(19540483-19540641)
chr4 (1-183)||(13060091-13060274)
chr4 (1-183)||(19906870-19907053)
chr4 (1-146)||(31728649-31728794)
chr4 (112-183)||(31269655-31269726)
chr4 (55-179)||(13065141-13065266)
chr4 (60-179)||(6943413-6943533)
chr4 (55-166)||(23093752-23093863)
chr4 (141-180)||(19107244-19107283)
chr4 (141-183)||(8029765-8029807)
chr4 (141-183)||(19102611-19102653)
chr4 (60-108)||(39216446-39216494)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-183)||(4694-4876)
scaffold0002 (26-183)||(443251-443408)
[»] chr8 (21 HSPs)
chr8 (1-183)||(40125178-40125360)
chr8 (1-183)||(1910236-1910419)
chr8 (1-183)||(33417161-33417342)
chr8 (1-180)||(17020985-17021164)
chr8 (1-180)||(17551422-17551601)
chr8 (1-183)||(1808077-1808259)
chr8 (1-183)||(15950836-15951017)
chr8 (1-183)||(17026549-17026729)
chr8 (1-183)||(17557041-17557221)
chr8 (1-183)||(18875672-18875853)
chr8 (1-183)||(19167278-19167460)
chr8 (1-180)||(44925198-44925383)
chr8 (77-183)||(38181601-38181707)
chr8 (1-126)||(17026828-17026952)
chr8 (1-126)||(17557320-17557444)
chr8 (55-179)||(23547953-23548078)
chr8 (86-167)||(2966276-2966355)
chr8 (112-179)||(18260473-18260540)
chr8 (60-101)||(33100104-33100145)
chr8 (26-155)||(26779782-26779911)
chr8 (103-151)||(13798291-13798339)
[»] chr2 (21 HSPs)
chr2 (1-183)||(30651544-30651726)
chr2 (1-183)||(1934275-1934458)
chr2 (1-183)||(9184701-9184882)
chr2 (1-182)||(25477577-25477758)
chr2 (1-183)||(9180010-9180191)
chr2 (4-150)||(17968249-17968395)
chr2 (1-147)||(12360914-12361060)
chr2 (1-150)||(18345074-18345223)
chr2 (1-180)||(12797560-12797737)
chr2 (1-150)||(19891763-19891912)
chr2 (1-104)||(25496672-25496775)
chr2 (14-179)||(40846886-40847052)
chr2 (1-174)||(24537305-24537478)
chr2 (68-180)||(29678390-29678503)
chr2 (26-155)||(34495405-34495536)
chr2 (1-61)||(17974635-17974695)
chr2 (141-183)||(31327383-31327425)
chr2 (15-132)||(19896694-19896811)
chr2 (55-146)||(15446641-15446733)
chr2 (25-94)||(27414445-27414514)
chr2 (141-173)||(31334114-31334146)
[»] chr7 (19 HSPs)
chr7 (1-183)||(4930852-4931035)
chr7 (1-180)||(12800020-12800198)
chr7 (1-183)||(3880594-3880776)
chr7 (1-183)||(2595455-2595635)
chr7 (1-183)||(42625871-42626053)
chr7 (14-183)||(27238781-27238950)
chr7 (1-179)||(8268930-8269108)
chr7 (1-150)||(26341870-26342019)
chr7 (1-179)||(10387640-10387819)
chr7 (1-178)||(10392379-10392556)
chr7 (13-150)||(44509692-44509829)
chr7 (14-176)||(21671830-21671993)
chr7 (14-176)||(3046206-3046367)
chr7 (26-177)||(3285135-3285282)
chr7 (14-175)||(16373030-16373190)
chr7 (141-178)||(30258738-30258775)
chr7 (112-165)||(15973400-15973453)
chr7 (97-179)||(6590400-6590484)
chr7 (134-179)||(23319550-23319597)
[»] chr3 (22 HSPs)
chr3 (1-183)||(7570498-7570681)
chr3 (1-183)||(23665405-23665588)
chr3 (1-183)||(55326408-55326589)
chr3 (1-183)||(757646-757829)
chr3 (1-180)||(27709565-27709743)
chr3 (1-183)||(3419619-3419801)
chr3 (1-177)||(55431865-55432041)
chr3 (27-183)||(46964642-46964798)
chr3 (1-176)||(20520594-20520769)
chr3 (1-150)||(14437983-14438132)
chr3 (1-150)||(18467875-18468024)
chr3 (1-150)||(18472669-18472818)
chr3 (1-146)||(32473307-32473452)
chr3 (1-183)||(12965171-12965352)
chr3 (79-183)||(23660824-23660929)
chr3 (5-132)||(12111895-12112022)
chr3 (1-110)||(12971098-12971207)
chr3 (141-183)||(29350871-29350913)
chr3 (141-180)||(2207222-2207261)
chr3 (146-183)||(24037799-24037836)
chr3 (1-51)||(23660773-23660823)
chr3 (29-178)||(20508256-20508406)
[»] chr6 (25 HSPs)
chr6 (1-183)||(6407144-6407326)
chr6 (1-177)||(11559499-11559675)
chr6 (1-183)||(14509603-14509785)
chr6 (1-177)||(11533989-11534165)
chr6 (1-183)||(16835447-16835623)
chr6 (1-180)||(20747585-20747764)
chr6 (1-183)||(25313736-25313918)
chr6 (1-183)||(26201230-26201412)
chr6 (28-183)||(4156661-4156816)
chr6 (1-183)||(11428590-11428773)
chr6 (1-183)||(2699376-2699558)
chr6 (1-183)||(33686931-33687112)
chr6 (1-150)||(17963842-17963991)
chr6 (1-150)||(8748423-8748572)
chr6 (1-183)||(5856610-5856793)
chr6 (26-166)||(19994705-19994845)
chr6 (36-179)||(22694683-22694827)
chr6 (1-179)||(17600001-17600184)
chr6 (5-160)||(17914239-17914394)
chr6 (1-94)||(11569980-11570073)
chr6 (110-175)||(11570136-11570201)
chr6 (1-96)||(11613192-11613287)
chr6 (1-179)||(12405650-12405823)
chr6 (141-183)||(19674417-19674459)
chr6 (146-180)||(12689607-12689641)
[»] chr1 (19 HSPs)
chr1 (1-183)||(16648918-16649100)
chr1 (1-183)||(38621338-38621520)
chr1 (1-183)||(19798283-19798465)
chr1 (1-183)||(47450507-47450689)
chr1 (1-183)||(25844385-25844568)
chr1 (1-183)||(33300526-33300708)
chr1 (1-183)||(16834105-16834287)
chr1 (1-183)||(39200045-39200226)
chr1 (1-150)||(10135988-10136137)
chr1 (1-150)||(26927004-26927153)
chr1 (1-150)||(10140756-10140905)
chr1 (1-132)||(51040805-51040936)
chr1 (26-179)||(20107984-20108138)
chr1 (1-150)||(8138281-8138430)
chr1 (96-179)||(10999271-10999354)
chr1 (143-183)||(23192251-23192291)
chr1 (113-175)||(11806898-11806961)
chr1 (141-183)||(39587781-39587823)
chr1 (141-183)||(40166594-40166636)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-183)||(7737-7920)
[»] scaffold0054 (2 HSPs)
scaffold0054 (13-180)||(29809-29975)
scaffold0054 (141-183)||(26086-26128)
[»] scaffold0057 (1 HSPs)
scaffold0057 (5-125)||(35812-35932)
[»] scaffold0690 (1 HSPs)
scaffold0690 (14-179)||(5862-6025)
[»] scaffold0240 (1 HSPs)
scaffold0240 (14-150)||(4635-4772)


Alignment Details
Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 40148708 - 40148526
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40148708 tttcttttgattctatccacaagggttgttgaacttattaatggataaacttcattttaatcatatccattagagtaactgttgtcgcaatttttgctaa 40148609  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||||||||||||||||||||||    
T  40148608 aacaattatagaatctctatataaataaaggacttcacttagttcaaaaaacacacgaaagagtttcattgagttgtcgggaa 40148526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 39519203 - 39519025
Alignment:
Q  5 ttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaaca 104  Q
    ||||||| |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  39519203 ttttgatcctatccacaagtgttgttgaactgattaatggataaacttcattttaatcttatccactagagtaactgttgtcacaatttttgctaaaaca 39519104  T
Q  105 gttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39519103 gttacagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagttttattgagttgtcgggaa 39519025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 6511920 - 6512102
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  ||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  6511920 tttcttttgatcctatccacaagtgttgttaaactgattaatggataaacttcattttaatcttatccattagattaactgttgtcgcattttttgctaa 6512019  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||  |||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6512020 aacagttgcagaatctctatataaatagaggactccactcagttcaaaaaacacatcaaagagtttcattgagttgtcgggaa 6512102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 20180438 - 20180620
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||||| |||  |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  20180438 tttcttttgatcctatccataagtgttgttgaactgattaatggataaacttcattttaatattatccattagagtaactgttgtctcaacttttgctaa 20180537  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20180538 aacagttacagaatctctatataaatagaggactccactcagttcaaaaatcacaccaaagagtttcattgagttgtcgggaa 20180620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 39523842 - 39523664
Alignment:
Q  5 ttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaaca 104  Q
    ||||||| |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39523842 ttttgatcctatccacaagtgttgttgaactgattaatggataaacttcattttaatcttatccactagagtaactgttgtcgcaatttttgctaaaaca 39523743  T
Q  105 gttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  39523742 gttacagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagaattttatcgagttgtcgggaa 39523664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 37248084 - 37248265
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaa-cttcattttaatcttatccattagagtaactgttgtcgcaatttttgcta 99  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||    
T  37248084 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaaactccattttaatcttatccattagagtaattgttgtcgcaatttttgcta 37248183  T
Q  100 aaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  37248184 aaacagttacagaatctctatataaatagaggactccactcagttcaaaaa--acaccaaagagtttcattgagttgtcgggaa 37248265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 12103838 - 12103656
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  |||| |||||  |||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  12103838 tttcttttgatcatatctacaagtgttgttgaactgattaatggataaactccattttaatcttatcctttagagtaactgttgtcgcaatttttgctaa 12103739  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| |||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  12103738 aacagttacaaaatctctatataaatagaggactccactcagtttaaaacacacaccaaatagtttcattgagttgtcgggaa 12103656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 26668090 - 26667941
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26668090 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 26667991  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  26667990 aacagttacagaatctctatataaatagaggactccacttagttcaaaaa 26667941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 26939687 - 26939538
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26939687 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 26939588  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  26939587 aacagttacagaatctctatataaatagaggactccacttagttcaaaaa 26939538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 36424450 - 36424301
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||| || |||| ||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36424450 tttcttttcatcctattcacaagtgttgttgaactgattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 36424351  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  36424350 aacagttacagaatctctatataaatagaggactccacttagttcaaaaa 36424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 29167257 - 29167410
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||||||||||||||  |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  29167257 tttcttttgattctatccacaagtgttgttgaactgatcaatggataaactccattttaatcttatccattagagtaactgttgccgcaatttttgctaa 29167356  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacac 154  Q
    |||||||| |||||||||||||||||  |||| |||||| ||||||||| ||||    
T  29167357 aacagttacagaatctctatataaatcgaggactccacttagttcaaaacacac 29167410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 6154717 - 6154870
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  ||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6154717 tttcttttgatcctatccacaagtgttgttaaactgattaatggatgaactccattttaatcttatccattagagtaactgatgtcgcaatttttgctaa 6154816  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacac 154  Q
    |||||||| |||||||||||||||||| |||| || ||| ||||||||||||||    
T  6154817 aacagttacagaatctctatataaatagaggactcaacttagttcaaaaaacac 6154870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7452565 - 7452416
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7452565 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaattttatccattagagtaactgttgtcgcaatttttgctaa 7452466  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    ||||| || |||||||||||||||||| |||| ||| || ||||||||||    
T  7452465 aacagatacagaatctctatataaatagaggactccgcttagttcaaaaa 7452416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 37537222 - 37537360
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  37537222 tttcttttgatcctatccacaagtgttgttgaactgattaatagataaactccattttaatcttattcattagagtaactgttgtcgcaatttttgctaa 37537321  T
Q  101 aacagttatagaatctctatataaataaaggattccact 139  Q
    |||||||| |||||||||||||||||| |||| ||||||    
T  37537322 aacagttacagaatctctatataaatagaggactccact 37537360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 37646341 - 37646479
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  37646341 tttcttttgatcctatccacaagtgttgttgaactgattaatagataaactccattttaatcttatccattagagtaactgttgtcacaatttttgctaa 37646440  T
Q  101 aacagttatagaatctctatataaataaaggattccact 139  Q
    |||||||| |||||||||||||||||| |||| ||||||    
T  37646441 aacagttacagaatctctatataaatagaggactccact 37646479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 16115541 - 16115692
Alignment:
Q  26 ttgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaa 125  Q
    |||||||||| |||| ||| |||  ||| |||| ||||||||||||| ||||  ||||| ||||||||| ||||||||| ||| | ||||||||||||||    
T  16115541 ttgttgaactgattagtggttaagtttccttttgatcttatccattaaagtacatgttgccgcaattttagctaaaacatttacaaaatctctatataaa 16115640  T
Q  126 taaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgt 177  Q
     | |||||||||||||||||||||| ||||||||||||||  ||||||||||    
T  16115641 cagaggattccactcagttcaaaaatcacaccaaagagttatattgagttgt 16115692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 35779931 - 35780047
Alignment:
Q  61 tcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaa 160  Q
    ||||||||| ||||||||  | || ||||||||| ||||||   |||| | ||||||||||||| || |||| ||||||| |||||||||||| ||||||    
T  35779931 tcttatccactagagtaagcgatgccgcaattttagctaaactcgttacaaaatctctatataa-tagaggactccactcggttcaaaaaacataccaaa 35780029  T
Q  161 gagtttcattgagttgtc 178  Q
    ||||| ||||||||||||    
T  35780030 gagttccattgagttgtc 35780047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 35679311 - 35679353
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35679311 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 35679353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 15414207 - 15414358
Alignment:
Q  27 tgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaat 126  Q
    ||||||||| |||| ||| |||  |||||||| | ||||||||||||||||| ||  | | ||||||| ||||||  ||||| | || ||||||||||||    
T  15414207 tgttgaactgattagtggttaagtttcattttgaacttatccattagagtaattgcagccacaattttagctaaactagttaca-aacctctatataaat 15414305  T
Q  127 aaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcg 179  Q
    | ||||||||||| |||| |||||  ||| |||| ||||  ||| ||||||||    
T  15414306 agaggattccacttagttaaaaaattacatcaaaaagttctattcagttgtcg 15414358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 4872578 - 4872531
Alignment:
Q  136 cactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||| |||||||||| || |||||||||||||||||||||||||||||    
T  4872578 cacttagttcaaaaatcataccaaagagtttcattgagttgtcgggaa 4872531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 9726176 - 9726215
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  9726176 agttcaaaaatcacaccaaagagtttcattgaattgtcgg 9726215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 36430315 - 36430272
Alignment:
Q  17 ccacaaggattgttgaacttattaatggataaacttcattttaa 60  Q
    |||||||  |||||||||| ||||||||||||||||||||||||    
T  36430315 ccacaagtgttgttgaactgattaatggataaacttcattttaa 36430272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 8e-76; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 31274326 - 31274147
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31274326 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccactagagtaactgttgtcgcaatttttgctaa 31274227  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31274226 aacagttacagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 31274147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 37263847 - 37264029
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37263847 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccactagagtaactgttgtcgcaatttttgctaa 37263946  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37263947 aacagttacagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgaattgtcgggaa 37264029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 37259147 - 37259329
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  37259147 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccactagagtaattgttgtcgcaatttttgctaa 37259246  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37259247 aacagttacacaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 37259329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 16421854 - 16421675
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||| ||||||  |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16421854 tttcttttgatcctattcacaagtgttgttgaattgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 16421755  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||| |||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  16421754 aacagttacagaatctctatataaatagaggactccaatcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 16421675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 51698734 - 51698552
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51698734 tttcttttgatcctatccacaagtgttgttaaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 51698635  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||| ||| |||||||||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  51698634 aacaattacagaatctctatataaatagatgactccactcagttcataaaacacaccaaagagtttcattgagttgtcaggaa 51698552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 55252474 - 55252297
Alignment:
Q  5 ttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaaca 104  Q
    ||||||| |||||||||||  |||||||||| |||||| |||||||| ||||||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  55252474 ttttgatcctatccacaagtgttgttgaactgattaatagataaactccattttaatctcatccattagagtaactactgtcgcaatttttgctaaaaca 55252375  T
Q  105 gttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcggga 182  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  55252374 gttacagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagaatttcattgagttgtcggga 55252297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 33462641 - 33462825
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  33462641 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaacttcattttagtcttatccattagagtaattgttgtcgcaatttttgctaa 33462740  T
Q  101 aacagttatagaatctctatataaataaagg-----attccactcagttc-aaaaaacacaccaaagagtttcattgagttgtcg 179  Q
    |||| ||||||||||| ||||||||||||||     | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  33462741 aacaattatagaatctttatataaataaaggactccactccactcagttcaaaaaaacacaccaaagagtttcattgagttgtcg 33462825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 32220850 - 32221029
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||  |||||  |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32220850 tttcttttgatcctatatacaagtgttgttgaaatgattaatgaataaacttcattttaatcttatccattagagtaactgttgtcgcaatttatgctaa 32220949  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||| | |||||||||||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  32220950 aacagttacataatctctatataaatagaggactccactcagttcaaaaaatacaccaaaaagtttcattgagttgtcgg 32221029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 12823171 - 12823350
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||||||||  |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12823171 tttcttttgatcatatccacaagtgttgttgaattgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 12823270  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||  ||||||||||||| |||| |  | | ||||||||||||||||||||||||||| |||||||||||||||||    
T  12823271 aacagttgcagaatctctatatcaatagaaaacttcactcagttcaaaaaacacaccaaagaatttcattgagttgtcgg 12823350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 33468285 - 33468468
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||||||||  ||||||||||  |||||||||||||||||||||| |||||||||||||||||||||  |||| ||||||||||||    
T  33468285 tttcttttgatcatatccacaagtgttgttgaactggttaatggataaacttcattttagtcttatccattagagtaactgcagtcgtaatttttgctaa 33468384  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttc-aaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| ||||||| |||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  33468385 aacagttacagaatctttatataaatagaggactccactcagttcaaaaaaacgcaccaaagagtttcattgagttgtcgggaa 33468468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 32081458 - 32081625
Alignment:
Q  7 ttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagt 106  Q
    ||||| |||||||||||  |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  32081458 ttgatcctatccacaagtgttgttgaactgattaatggataaacttcattttaatcttatcgattagagtaactgttgtcgcaatttatgctaaaacagt 32081557  T
Q  107 tatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttg 176  Q
    || ||||||||  |||||||| | || ||||||||||||||||||||||||||| |||||||||||||||    
T  32081558 tacagaatctc--tataaatagaagactccactcagttcaaaaaacacaccaaaaagtttcattgagttg 32081625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 31766684 - 31766528
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31766684 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaattccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 31766585  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacacc 157  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||| |||||||||    
T  31766584 aacagttacagaatctctatataaatagaggagtccacttagttcaagaaacacacc 31766528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5270707 - 5270856
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5270707 tttcttttgatcttatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 5270806  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  5270807 aacagttacagaatctctatataaatagaggactccacttagttcaaaaa 5270856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8694525 - 8694376
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8694525 tttcttttgatcctatccacaagtgttgttaaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 8694426  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| | |||||||||||||||| |||| |||||| ||||||||||    
T  8694425 aacagttacaaaatctctatataaatagaggactccacttagttcaaaaa 8694376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5927501 - 5927650
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  5927501 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaacttcattttaatcttatccattagagtaactgttgtcacaatatttgctaa 5927600  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||| ||| |||||||| ||||||||| |||| |||||| ||||||||||    
T  5927601 aacaattacagaatctccatataaatagaggactccacttagttcaaaaa 5927650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 19540483 - 19540641
Alignment:
Q  26 ttgttgaacttattaatggataaacttcattttaatcttatccatta----gagtaactgttgtcgcaatttttgctaaaacagttatagaatctctata 121  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||    |||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  19540483 ttgttgaactgattaatggataaacttcaatttaatcttatccattaattagagtaactgttgtcgcaatttttgataaaacagttacaaaatctctata 19540582  T
Q  122 taaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||| |||| |||||||||||||||||| | || |||||||||||||||||||||||    
T  19540583 taaatagaggactccactcagttcaaaaaataaactaaagagtttcattgagttgtcgg 19540641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 13060274 - 13060091
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||| || |||||||||||  |||||||||| |||||||||||||||  |||||||||||||| || ||||| ||| |||||||||||||||||||    
T  13060274 tttcttttcatcctatccacaagtgttgttgaactgattaatggataaactctattttaatcttatctatcagagtgacttttgtcgcaatttttgctaa 13060175  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaa-cacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| |||| |||||| ||||||||||| ||||  ||||||||||||| | ||||||||||    
T  13060174 aacagttacaaaatctctatataaatagaggactccactgagttcaaaaaaccacaaaaaagagtttcatttaattgtcgggaa 13060091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 19907053 - 19906870
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||| |||||||    
T  19907053 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccaatttcatcttatccattagagtgactgttgtcgcaattgttgctaa 19906954  T
Q  101 aacagttatagaatctctatataaataaaggattccactcag-ttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||| ||| | |||||||||||||||| |||| ||||||||| || |||||| | | |||||||||| |||||||||| |||||    
T  19906953 aacaattacaaaatctctatataaatagaggactccactcagtttaaaaaaatatatcaaagagtttaattgagttgttgggaa 19906870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 31728649 - 31728794
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||||||||  || ||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31728649 tttcttttgatcatatccacaagtgttattgaactgattaatggattaactccattttaatcttatccattagagtaactgttgtcgcaatttttgccaa 31728748  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttca 146  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||    
T  31728749 aacagttacagaatctctatataaatagaggactccacttagttca 31728794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 31269726 - 31269655
Alignment:
Q  112 aatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31269726 aatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 31269655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 13065141 - 13065266
Alignment:
Q  55 ttttaatcttatccattagagtaactgttgtcgcaa-tttttgctaaaacagttatagaatctctatataaataaaggattccactcagttcaaaaaaca 153  Q
    |||| |||||||||||||||||||||  || || || |||||||||| ||||||| | |||||||||||||||| |||| |||||| |||||||||||||    
T  13065141 ttttgatcttatccattagagtaactactg-cgaaattttttgctaatacagttacaaaatctctatataaatacaggactccacttagttcaaaaaaca 13065239  T
Q  154 caccaaagagtttc-attgagttgtcg 179  Q
    |||||||||||||| ||||||||||||    
T  13065240 caccaaagagtttctattgagttgtcg 13065266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 179
Target Start/End: Complemental strand, 6943533 - 6943413
Alignment:
Q  60 atcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaa 159  Q
    |||||||||||||||||||||  |||||||||||| |||||||||| || | |||||| ||||||| | |||| || |||||||||||||| |||| |||    
T  6943533 atcttatccattagagtaactactgtcgcaattttcgctaaaacagctacaaaatctcaatataaacataggactctactcagttcaaaaatcacatcaa 6943434  T
Q  160 agagtttc-attgagttgtcg 179  Q
    |||||||| ||||||||||||    
T  6943433 agagtttctattgagttgtcg 6943413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 23093863 - 23093752
Alignment:
Q  55 ttttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacac 154  Q
    |||| |||||||||| ||| |||| ||||| |||||||||   |||| | |||| | || ||||| ||||||| |||| |||||||||||||||||||||    
T  23093863 ttttgatcttatccactagtgtaattgttgccgcaattttaattaaaccggttacaaaacctctaaataaatagaggactccactcagttcaaaaaacac 23093764  T
Q  155 accaaagagttt 166  Q
    | ||||||||||    
T  23093763 atcaaagagttt 23093752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 19107283 - 19107244
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  19107283 agttcaaaaatcacaccaaagagtttcattgagttgtcgg 19107244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 8029765 - 8029807
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    ||||||||||| | |||||||||||||||||||||||||||||    
T  8029765 agttcaaaaaatataccaaagagtttcattgagttgtcgggaa 8029807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 19102653 - 19102611
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  19102653 agttcaaaaatcaaaccaaagagtttcattgagttgtcgggaa 19102611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 39216446 - 39216494
Alignment:
Q  60 atcttatccattagagtaactgttgtcgcaatttttgctaaaacagtta 108  Q
    ||||||||||||||| ||||| ||||||||||||| | |||||||||||    
T  39216446 atcttatccattagattaactattgtcgcaattttagttaaaacagtta 39216494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 4876 - 4694
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||| |||||| |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4876 tttcctttgatcctatccacaagtgttgttgaactgattaatggataaacttcattttaatcttatccactagagtaactgttgtcgcaatttttgctaa 4777  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4776 aacagttacagaatctctatataaatagatgactccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 4694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 26 - 183
Target Start/End: Original strand, 443251 - 443408
Alignment:
Q  26 ttgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaa 125  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||  |||| ||||||||||||||||||||| |||||||||||| |||    
T  443251 ttgttgaactgattaatgtataaacttcatttttatcttatccattagagtaactactgtcacaatttttgctaaaacagttacagaatctctatacaaa 443350  T
Q  126 taaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  443351 tagaggactccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 443408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 40125178 - 40125360
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  40125178 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaattgttgtctcaatttttgctaa 40125277  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40125278 aacagttacagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 40125360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 1910236 - 1910419
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  1910236 tttcttttgatcatatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattatagtaactgttgtcgcaatttttgctaa 1910335  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagtt-caaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| || | ||| |||||||  ||||||||||||||||||||||||||||||||||||||    
T  1910336 aacagttacagaatctctatataaatagagtactccgctcagttaaaaaaaacacaccaaagagtttcattgagttgtcgggaa 1910419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 33417342 - 33417161
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  33417342 tttcttttgattctatccacaagtgttgttgaactgattaatggataaacttcattttaatcttattcatgagagtaactgttgttgcaatttttgctaa 33417243  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| |||| |||||| ||||| | |||||||| ||||||||||||||||||||||||||    
T  33417242 aacagttacaaaatctctatataaatagaggactccacttagttc-ataaacacactaaagagtttcattgagttgtcgggaa 33417161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 17021164 - 17020985
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||| | |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17021164 tttcttttgatcctatccacaagtgttgttgaattgattaatggataaactctattttaatcttatccattagagtaactattgtcgcaatttttgctaa 17021065  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||| | ||||||| |||||||| |||| |||||||||||||| |||||||||||||||||||||| |||||||||    
T  17021064 aacagttacaaaatctctgtataaatagaggactccactcagttcaagaaacacaccaaagagtttcattaagttgtcgg 17020985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 17551601 - 17551422
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||| | |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17551601 tttcttttgatcctatccacaagtgttgttgaattgattaatggataaactctattttaatcttatccattagagtaactattgtcgcaatttttgctaa 17551502  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||| | ||||||| |||||||| |||| |||||||||||||| |||||||||||||||||||||| |||||||||    
T  17551501 aacagttacaaaatctctgtataaatagaggactccactcagttcaagaaacacaccaaagagtttcattaagttgtcgg 17551422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 1808259 - 1808077
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||| | ||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  1808259 tttcttttgatcctatccacaagtgttgttgaattgattaatggataaactccattttgatcttatccattagagtaactgctgtcgcaatttttgctaa 1808160  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| | || | ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  1808159 aacagttacaaaatctctatataaatagaagactacactcagttcaaaaaacacaccaaaaagtttcattgagttgttgggaa 1808077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 15950836 - 15951017
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||||||||  |||||||||| ||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||||    
T  15950836 tttcttttgatcttatccacaagtgttgttgaactgattaatggataaactccattttaatcttattcattagagtaattgctgtcgcaatttttgctaa 15950935  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||| | |||| |||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  15950936 aacagttacagaatctctatataaaaagaggactccacttagttc-aaaaacacaccaaagaatttcattgagttgtcgggaa 15951017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 17026729 - 17026549
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||| |||||  |||||||||| |||||||||||||||  ||||||||||||||||||||||||| || ||| ||||||||||||||    
T  17026729 tttcttttgat-ctatc-acaagtgttgttgaactgattaatggataaactcaattttaatcttatccattagagtaattgctgttgcaatttttgctaa 17026632  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||| ||| |||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17026631 aacaattacagaatctctatataaatagaggactccactcaattcaaaaaacacaccaaagagtttcattgagttgtcgggaa 17026549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 17557221 - 17557041
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||| |||||  |||||||||| |||||||||||||||  ||||||||||||||||||||||||| || ||| ||||||||||||||    
T  17557221 tttcttttgat-ctatc-acaagtgttgttgaactgattaatggataaactcaattttaatcttatccattagagtaattgctgttgcaatttttgctaa 17557124  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||| ||| |||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17557123 aacaattacagaatctctatataaatagaggactccactcaattcaaaaaacacaccaaagagtttcattgagttgtcgggaa 17557041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 18875672 - 18875853
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| |||||| |||||||| ||||||||| |||| |||||||||||||  |||||||||||||| |||    
T  18875672 tttcttttgatcctatccacaagtgttgttgaactgattaatagataaactccattttaattttattcattagagtaactaatgtcgcaatttttg-taa 18875770  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  18875771 aacagttacagaatctctatataaatagaggactccactcagttcaataaacacaccatagagtttcattgagttgtcgggaa 18875853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 19167460 - 19167278
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||| |||||| ||||||| |||  |||||||| |||||||| |||||||| ||||||||| |||||||||| ||||| ||||||||||||||||||| |    
T  19167460 tttcgtttgatcctatccataagtgttgttgaatttattaatcgataaactccattttaattttatccattacagtaattgttgtcgcaatttttgctga 19167361  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19167360 aacagttacaaaatctctatataaatagaagactccactcagttcaaaaaacacaccaaagagtttcattgagttgttgggaa 19167278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 44925198 - 44925383
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||| ||  |||||| |||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  44925198 tttctttttatcatatccagaagtgttgttgaactgattaatggataaacttcattttaatcttatccattagagtaactgctgttgcaatttttgctaa 44925297  T
Q  101 aacagttatagaatctct------atataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||| |||||||||      ||||||||| |||| | |||| |||||| |||| ||| ||||||||||||||||||||||||    
T  44925298 aacagttacagaatctctatataaatataaatataggacttcacttagttcacaaaaaacaacaaagagtttcattgagttgtcgg 44925383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 183
Target Start/End: Original strand, 38181601 - 38181707
Alignment:
Q  77 aactgttgtcgcaatttttgctaaaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttg 176  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  38181601 aactgttgtcgcaatttttgctaaaacggttacaaaatctctatataaatagaggactccactcagtttaaaaaacacaccaaagagtttcattgagttg 38181700  T
Q  177 tcgggaa 183  Q
    |||||||    
T  38181701 tcgggaa 38181707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 17026952 - 17026828
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| |||||||||||||||  ||||||||||||||||||||||||| || ||| ||||||||||||||    
T  17026952 tttcttttgat-ctatccacaagtgttgttgaactgattaatggataaactcaattttaatcttatccattagagtaattgctgttgcaatttttgctaa 17026854  T
Q  101 aacagttatagaatctctatataaat 126  Q
    |||||||| |||||||||||||||||    
T  17026853 aacagttacagaatctctatataaat 17026828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 17557444 - 17557320
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| |||||||||||||||  ||||||||||||||||||||||||| || ||| ||||||||||||||    
T  17557444 tttcttttgat-ctatccacaagtgttgttgaactgattaatggataaactcaattttaatcttatccattagagtaattgctgttgcaatttttgctaa 17557346  T
Q  101 aacagttatagaatctctatataaat 126  Q
    |||||||| |||||||||||||||||    
T  17557345 aacagttacagaatctctatataaat 17557320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 23547953 - 23548078
Alignment:
Q  55 ttttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacac 154  Q
    |||| ||||||| ||||| | |||||||||   ||||||||||||||||||||| | |||||||||||||||| |||| |||||  |||||||||| |||    
T  23547953 ttttgatcttattcattaaattaactgttgcttcaatttttgctaaaacagttacacaatctctatataaatagaggactccacctagttcaaaaatcac 23548052  T
Q  155 accaaagagtttc-attgagttgtcg 179  Q
    ||||||||||||| ||||||| ||||    
T  23548053 accaaagagtttctattgagtggtcg 23548078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 2966355 - 2966276
Alignment:
Q  86 cgcaatttttgctaaaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttc 167  Q
    |||||||||||||||| |||||| | |||||||||||||||  | ||  | |||||||||||||| ||||||||||||||||    
T  2966355 cgcaatttttgctaaagcagttacaaaatctctatataaattgaaga--ctactcagttcaaaaatcacaccaaagagtttc 2966276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 18260540 - 18260473
Alignment:
Q  112 aatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcg 179  Q
    |||||||||||||||| |||| |||||||| |||| ||| ||||||||| |||||  |||||||||||    
T  18260540 aatctctatataaatagaggactccactcaattcataaatcacaccaaatagttttgttgagttgtcg 18260473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 33100145 - 33100104
Alignment:
Q  60 atcttatccattagagtaactgttgtcgcaatttttgctaaa 101  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  33100145 atcttatccattagagtaattgttgtcgcaattttagctaaa 33100104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 155
Target Start/End: Complemental strand, 26779911 - 26779782
Alignment:
Q  26 ttgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaattttt---gctaaaacagttatagaatctctatat 122  Q
    |||||||||| ||||||||||||  | |  ||| ||||||||  ||||||||| ||||| ||||||||||   ||||||| ||||| | |||||||||||    
T  26779911 ttgttgaactgattaatggataagttcc--tttgatcttatctgttagagtaattgttgccgcaattttttttgctaaaatagttacaaaatctctatat 26779814  T
Q  123 aaataaaggattccactcagttcaaaaaacaca 155  Q
    |||  | ||| |||||||| |||||||| ||||    
T  26779813 aaa-cagggactccactcaattcaaaaatcaca 26779782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 13798291 - 13798339
Alignment:
Q  103 cagttatagaatctctatataaataaaggattccactcagttcaaaaaa 151  Q
    |||||||  ||||||||||||||||  ||||| ||||||||||||||||    
T  13798291 cagttatgaaatctctatataaatagtggatttcactcagttcaaaaaa 13798339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 30651726 - 30651544
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  30651726 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaacttcattttaatcttatccactagagtaactgttgtcacaatttttgctaa 30651627  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30651626 aacagttacagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagttttattgagttgtcgggaa 30651544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 1934275 - 1934458
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1934275 tttcttttgatcctatccataagtgttgttgaactgattaatggataaacttcattttaatcttatccactagagtaactgttgtcgcaatttttgctaa 1934374  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttc-aaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1934375 aacagttacagaatctctatataaatagaggactccactcagttcaaaaaaacacaccaaagagtttcattgagttgtcgggaa 1934458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 9184701 - 9184882
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  9184701 tttcttttgatcctatccacaagtgttgttgaacttattaatggataaactccattttaatcttatccattagagtaattgttgtcgcaatttttgctaa 9184800  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  9184801 aacagttacagaatctctatataaatagaggactccactaagttc-aaaaacacaccaaagagtttcattgagttgtcgggaa 9184882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 25477577 - 25477758
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||| |||||  |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25477577 tttcttttgatcctatctacaagtgttgttgaactgattaatgaataaacttcattttaatcttatccattagagtaactgctgtcgcaatttttgctaa 25477676  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcggga 182  Q
    |||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25477677 aacagttacagaatctctatataaatagaggactccactcaattcaaaaaacacaccaaagagtttcattgagttgtcggga 25477758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 9180010 - 9180191
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  9180010 tttcttttgatcctatccacaagtgttgttgaacttattaatggataaactccattttaatcttatccattagagtaattgttgtcgcaatttttgctaa 9180109  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  9180110 aacagttacagaatctctatataaatagaggactccactaagttc-aaaaacacaccaaagagtttcattgagatgtcgggaa 9180191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 17968249 - 17968395
Alignment:
Q  4 cttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaac 103  Q
    |||||||| |||||||||||  |||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17968249 cttttgatcctatccacaagtgttgttgaactgattaatggataaactctattttaatcttatccattagagtaactgttgtcgcaatttttggtaaaac 17968348  T
Q  104 agttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    ||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  17968349 agttacagaatctctatataaatagaggactccacttagttcaaaaa 17968395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12361060 - 12360914
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||| |||||  |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  12361060 tttcttttgatcctatcaacaagtgttgttgaactgattaatggataaacttcattttaattttatccattagagtaactgccgtcgcaatttttgctaa 12360961  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaa 147  Q
    |||||||| |||||||||||||||||| |||| |||||| |||||||    
T  12360960 aacagttacagaatctctatataaatagaggactccacttagttcaa 12360914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 18345223 - 18345074
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||| ||||||  |||||||||| | ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  18345223 tttcttttgatcctattcacaagtgttgttgaactgactaatggataaactccattttaatcttatccattagagtgactgttgtcgcaatttttgctaa 18345124  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| ||||  ||||| ||||||||||    
T  18345123 aacagttacagaatctctatataaatagaggaccccacttagttcaaaaa 18345074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 12797737 - 12797560
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||||||||  |||||||| | ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| |||||    
T  12797737 tttcttttgatcatatccacaagtgttgttgaaatgattaatggataaactccattttaatcttatccattagagcgactgttgtcgcaattttcgctaa 12797638  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||| | | |||||||||||||| |||| | |||||| || |||||  ||||||||||||||||||||||||||||    
T  12797637 aacagttacaaattctctatataaatagaggactgcactcaatttaaaaa--acaccaaagagtttcattgagttgtcgg 12797560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 19891763 - 19891912
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||| ||||||||||  |||||||||| || |||||||||| | ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  19891763 tttcttttgattttatccacaagtgttgttgaactaatcaatggataaagtccattttaatcttatccattagagaaactattgtcgcaatttttgctaa 19891862  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    || ||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  19891863 aatagttacagaatctctatataaatagaggactccacttagttcaaaaa 19891912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25496672 - 25496775
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||| |||||  |||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25496672 tttcttttgatcctatctacaagtgttgttgacttgattaatgaataaacttcattttaatcttatccattagagtaactgttgtcgcaatttgtgctaa 25496771  T
Q  101 aaca 104  Q
    ||||    
T  25496772 aaca 25496775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 40846886 - 40847052
Alignment:
Q  14 tatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaa 113  Q
    ||||||||||  |||||||||| ||||||| ||||| ||| |||| ||  ||||||||||| ||||||||| ||||||||||||||||| | ||| | ||    
T  40846886 tatccacaagtgttgttgaactgattaatgaataaatttccttttgatactatccattagaataactgttgccgcaatttttgctaaaataattacaaaa 40846985  T
Q  114 tctctatataaataaaggattccactcagttcaaaaaacacaccaaagagttt-cattgagttgtcg 179  Q
    | |||||||||| | |||| ||||||| ||||||||| ||||| |||||||||  ||||||||||||    
T  40846986 tttctatataaacagaggactccactcggttcaaaaatcacacaaaagagtttatattgagttgtcg 40847052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 24537305 - 24537478
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||| ||||| ||||| |||||  || ||||||| ||||||||||||| |   |||| ||||||||||||||||||||||||| |||||||||||||||    
T  24537305 tttctcttgatcctatctacaagtgtttttgaactgattaatggataaattctcttttgatcttatccattagagtaactgttggcgcaatttttgctaa 24537404  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagt 174  Q
    |||||||| | || ||||||||| | | |||| || | ||| ||||||||  |||||||||||||  |||||||    
T  24537405 aacagttacaaaagctctatatatagagaggactctaatcaattcaaaaagtacaccaaagagttctattgagt 24537478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 29678503 - 29678390
Alignment:
Q  68 cattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaataaaggattccactcag-ttcaaaaaacacaccaaagagttt 166  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||  |||| |||||| || || |||||||||| |||||| |||    
T  29678503 cattagagtaattgttgtcgcaatttttgctaaaacagttacagactctctatataaattgaggactccacttagtttaaaaaaacacatcaaagaattt 29678404  T
Q  167 cattgagttgtcgg 180  Q
    ||||||||||||||    
T  29678403 cattgagttgtcgg 29678390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 34495405 - 34495536
Alignment:
Q  26 ttgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttataga--atctctatata 123  Q
    |||||||||| |||| ||| |||  ||| |||| ||||||||||||||||||| ||||||||||||||  ||||||||||||| | |  |||||||||||    
T  34495405 ttgttgaactgattagtggttaagtttccttttgatcttatccattagagtaattgttgtcgcaatttcagctaaaacagttacaaaatatctctatata 34495504  T
Q  124 aataaaggattccactcagttcaaaaaacaca 155  Q
    |||| |||| |||||||  |||||||| ||||    
T  34495505 aatagaggactccactcgattcaaaaatcaca 34495536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17974635 - 17974695
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaat 61  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| |||||||||    
T  17974635 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaat 17974695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 31327425 - 31327383
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  31327425 agttcaaaaatcacaccaaagagtttcattgagttgtcgggaa 31327383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 19896811 - 19896694
Alignment:
Q  15 atccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaat 114  Q
    |||||||||  || ||||||| ||| ||||||||  | | |||| ||||||||| ||||| |||||  || ||||||||||| ||||||| ||| | |||    
T  19896811 atccacaagtgttattgaactgatttatggataagttcccttttgatcttatccgttagactaactcctgccgcaatttttgttaaaacaattacaaaat 19896712  T
Q  115 ctctatataaataaagga 132  Q
    ||||||||||||| ||||    
T  19896711 ctctatataaatagagga 19896694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 15446641 - 15446733
Alignment:
Q  55 ttttaatcttatccattagagtaactgttgtcgcaatttttgctaaa-acagttatagaatctctatataaataaaggattccactcagttca 146  Q
    |||| ||||||||||  ||||||| ||||| |||| |||| |||||| ||||||| | | |||||||||||||| ||||||  ||||||||||    
T  15446641 ttttgatcttatccacaagagtaattgttgacgcagttttagctaaatacagttaaaaagtctctatataaatagaggattttactcagttca 15446733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 27414445 - 27414514
Alignment:
Q  25 attgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttt 94  Q
    ||||||||| | |||| ||| |||  |||||||| |||||| ||| |||||||||||||| |||||||||    
T  27414445 attgttgaattgattagtgggtaagtttcattttgatcttaaccactagagtaactgttgccgcaatttt 27414514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 31334146 - 31334114
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgag 173  Q
    |||||||||| ||||||||||||||||||||||    
T  31334146 agttcaaaaatcacaccaaagagtttcattgag 31334114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 4931035 - 4930852
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaa-cttcattttaatcttatccattagagtaactgttgtcgcaatttttgcta 99  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||    
T  4931035 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaaactccattttaatcttatccattagagtaattgttgtcgcaatttttgcta 4930936  T
Q  100 aaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4930935 aaacagttacagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 4930852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 12800198 - 12800020
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  12800198 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttgatcttatccattagagtaactgttgtc-caatttttgctaa 12800100  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||| |||||| ||||||||||| |||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  12800099 aacagttacagaatcactatataaatagaggacttcacttagttcaaaaaacacaccaaagagtttcattgagttgtcgg 12800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 3880776 - 3880594
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||||||| |  |||||||||| ||||||||||||| | |||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  3880776 tttcttttgatcctatccacaggtgttgttgaactgattaatggataaattccattttgatcgtatccattagagtaactgctgtcgcaatttttgctaa 3880677  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    || ||||| | |||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3880676 aatagttacaaaatctctatataaatagaggactccactcagttctaaaaacacaccaaagagtttcattgagttgtcgggaa 3880594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 2595635 - 2595455
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| |||| |||||||||||||    
T  2595635 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactgcattttaatcttatccattaaagtaactgctgtcacaatttttgctaa 2595536  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||  | ||||||  |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2595535 aacagttgcaaaatctc--tataaatagaggactccactcagttcaaaaaacacacgaaagagtttcattgagttgtcgggaa 2595455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 42625871 - 42626053
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||||| |||  ||||| |||| |||||||||||||||  |||||||||||||| |||||| |||| ||||||||||||||||||||    
T  42625871 tttcttttgatcctatccataagtgttgttaaactgattaatggataaactcaattttaatcttatctattagaataacagttgtcgcaatttttgctaa 42625970  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| |||| |||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  42625971 aacagttacataatctctatataaatagaggactccactcagttcaaaaattacaccaatgagtttcattgagttgtcgggaa 42626053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 27238950 - 27238781
Alignment:
Q  14 tatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaa 113  Q
    ||||||||||  |||||||||| |||||||||||||||  ||||||||||||||||||| | |||||| | | |||||||||||||||||||||| | ||    
T  27238950 tatccacaagtgttgttgaactgattaatggataaactcaattttaatcttatccattaaactaactgctattgcaatttttgctaaaacagttacaaaa 27238851  T
Q  114 tctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27238850 tctctatataaatagaggactccactcagttcaataaacacaccaaagagtttcattgagttgtcgggaa 27238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 8269108 - 8268930
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| | || ||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||    
T  8269108 tttcttttgatccaattcacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaacttccgtcgcaatttttgctaa 8269009  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcg 179  Q
    |||||||||| |||||||| ||||||| |||| || |||| |||||||||  |||||||||||||||||||||||||||    
T  8269008 aacagttataaaatctctaaataaatagaggactctactcggttcaaaaattacaccaaagagtttcattgagttgtcg 8268930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 26342019 - 26341870
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26342019 tttcttttgatcctatccacaagtgttgttgaactgattaatagataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgcgaa 26341920  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| |||| | |||| ||||||||||    
T  26341919 aacagttacagaatctctatataaatagaggacttcacttagttcaaaaa 26341870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 10387640 - 10387819
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| | ||||| ||||  | | |||| ||||||||||| ||||||||||||| |||||||||||||||    
T  10387640 tttcttttgatcctatccacaagtgttgttgaactaaataatgaataagttcctttttgatcttatccatcagagtaactgttgccgcaatttttgctaa 10387739  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttc-attgagttgtcg 179  Q
    || ||||| | |||||||||||||||| |||| |||||| |||||||||| |||| ||||||||||| ||||||||||||    
T  10387740 aatagttacaaaatctctatataaatagaggactccacttagttcaaaaatcacatcaaagagtttctattgagttgtcg 10387819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 10392379 - 10392556
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||| ||||||||||||||  || ||||||| ||||||||||||  |||||||| ||||||||||| | ||||| ||||| |||||||||||| ||    
T  10392379 tttcttttaattctatccacaagtgttattgaactgattaatggataagtttcattttgatcttatccatcaaagtaattgttgccgcaatttttgccaa 10392478  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttc-attgagttgtc 178  Q
    |||||||  | |||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||| |||||||||||    
T  10392479 aacagtt-caaaatctctatataaatagaggactccactcagttcaaaaatcacatcaaagagtttctattgagttgtc 10392556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 44509692 - 44509829
Alignment:
Q  13 ctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttataga 112  Q
    |||||||||||  ||||| |||| ||| ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |    
T  44509692 ctatccacaagtgttgttaaactgattgatggataaattccattttaatcttatccattagagtaactgctgtcgcaatttttgctaaaacagttaaaaa 44509791  T
Q  113 atctctatataaataaaggattccactcagttcaaaaa 150  Q
    || |||||||||||| ||||||||||| ||||||||||    
T  44509792 atttctatataaatagaggattccacttagttcaaaaa 44509829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 21671993 - 21671830
Alignment:
Q  14 tatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaa 113  Q
    ||||||||||  |||||||||| ||||||||||||  | | |||| || ||||| |||||| ||||||||| ||||||||||||||||||||||| | ||    
T  21671993 tatccacaagtgttgttgaactgattaatggataagttcccttttgatattatctattagattaactgttgccgcaatttttgctaaaacagttacaaaa 21671894  T
Q  114 tctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttc-attgagttg 176  Q
    |||||||||||||| || | ||||||||||||||||| || ||||||||||||| |||||||||    
T  21671893 tctctatataaatagagtactccactcagttcaaaaatcataccaaagagtttctattgagttg 21671830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 3046367 - 3046206
Alignment:
Q  14 tatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaa 113  Q
    ||||||||||  |||||||||||||||||||||||  | | |||| ||||||||||||| ||||||||||  ||||||||||||||||||||||| | ||    
T  3046367 tatccacaagtgttgttgaacttattaatggataagttcccttttgatcttatccattaaagtaactgtt-ccgcaatttttgctaaaacagttaca-aa 3046270  T
Q  114 tctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttc-attgagttg 176  Q
    ||||||||| |||| | ||||| ||||||||||||||  |||||||| |||||| |||||||||    
T  3046269 tctctatatcaatagatgattctactcagttcaaaaattacaccaaaaagtttctattgagttg 3046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 3285282 - 3285135
Alignment:
Q  26 ttgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaa 125  Q
    |||||||||| ||||||||||||  | | |||| |||||||||||||| |||||||||| ||| ||||||||||||| ||||| | |||||||     ||    
T  3285282 ttgttgaactgattaatggataagttcccttttgatcttatccattagtgtaactgttgccgcgatttttgctaaaatagttacaaaatctct-----aa 3285188  T
Q  126 taaaggattccactcagttcaaaaaacacaccaaagagtttc-attgagttgt 177  Q
    || |||| ||||||||||| ||||| || ||||||||||||| ||||||||||    
T  3285187 tagaggactccactcagtttaaaaatcataccaaagagtttctattgagttgt 3285135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 16373190 - 16373030
Alignment:
Q  14 tatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaa 113  Q
    ||||||||||  ||| | |||| |||| ||| |||  ||| |||| || |||||||||||||||  |||||| |||| ||| | ||||||||||| | ||    
T  16373190 tatccacaagtgttgctaaactgattagtggttaagtttccttttgattttatccattagagtat-tgttgttgcaaatttagttaaaacagttacaaaa 16373092  T
Q  114 tctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagtt 175  Q
    |  |||||||||||||||| |||||||| |||||||| ||||||||||||||  ||||||||    
T  16373091 ttactatataaataaaggactccactcaattcaaaaatcacaccaaagagttctattgagtt 16373030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 30258775 - 30258738
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtc 178  Q
    |||||||||| |||||||||||||||||||||||||||    
T  30258775 agttcaaaaatcacaccaaagagtttcattgagttgtc 30258738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 15973453 - 15973400
Alignment:
Q  112 aatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtt 165  Q
    ||||||||||| |||||| || ||||||||||||||||| ||||  ||||||||    
T  15973453 aatctctatatgaataaatgactccactcagttcaaaaagcacatgaaagagtt 15973400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 179
Target Start/End: Original strand, 6590400 - 6590484
Alignment:
Q  97 ctaaaacagttatagaatctctatataaataaagg-attccactcagttcaaaa-aacacaccaaagagtttcattgagttgtcg 179  Q
    |||||| ||||| | ||||||||||||| || ||| | ||| |||||||||||| ||||||||||||| ||  ||||||||||||    
T  6590400 ctaaaatagttacaaaatctctatataattatagggactcccctcagttcaaaaaaacacaccaaagaattatattgagttgtcg 6590484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 23319597 - 23319550
Alignment:
Q  134 tccactcagttcaaaaaa--cacaccaaagagtttcattgagttgtcg 179  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||||    
T  23319597 tccactcaattcaaaaatttcacaccaaagagtttcattgagttgtcg 23319550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 7570498 - 7570681
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  7570498 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaacttcattttaatcttatccattagagtaattgttgtcgcagtttttgctaa 7570597  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttc-aaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7570598 aacagttacagaatctctatataaatagaggactccactcagttcaaaaaaacacaccaaagagtttcattgagttgtcgggaa 7570681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 23665405 - 23665588
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||||||||||| |||  |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23665405 tttcttttgattctatccataagtgttgttgaactgattaatggataaactccattttaatcttatccactagagtaactgttgtcgcaatttttgctaa 23665504  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttc-aaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23665505 aacagttacagaatctctatataaatagaggactccactcagttcaaaaaaacacaccaaagagtttcattgagttgtcgggaa 23665588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 55326589 - 55326408
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  55326589 tttcttttgatcctatccacaagtgttgttgaacttattaatggataaactccattttaatcttatccattagagtaattgttgtcgcaatttttgctaa 55326490  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  55326489 aacagttacagaatctctatataaatagaggactccactaagttc-aaaaacacaccaaagattttcattgagttgtcgggaa 55326408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 757646 - 757829
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaa-cttcattttaatcttatccattagagtaactgttgtcgcaatttttgcta 99  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||    
T  757646 tttcttttgatactatccacaagtgttgttgaactgattaatggataaaactccattttaatcttatccattagagtaattgttgtcgcaatttttgcta 757745  T
Q  100 aaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    ||||||||| | |||||||||||||||| || | ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  757746 aaacagttacataatctctatataaatagagaactccactcagctcaaaaaacacaccaaagagtttcattgagttgtcgggaa 757829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 27709743 - 27709565
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  27709743 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagttactgttgtcgcaatttttgctaa 27709644  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||||| |||||||||||||||||| | || ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  27709643 aacagttacagaatctctatataaataga-gactccactcagtttaaagaacacaccaaagagtttcattgagttgtcgg 27709565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 3419801 - 3419619
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||||||||   |||| ||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||    
T  3419801 tttcttttgatcctatccacaactgttgtcgaactgattaatggataaaatccattttaatcttattcattagagtaactgttgtcgcaatttttgctaa 3419702  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    || ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3419701 aatagttagagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagtttcactgagttgtcgggaa 3419619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 55432041 - 55431865
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||||||||  |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  55432041 tttcttttgatcatatccacaagtgttgttgaactgattaattgataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgttaa 55431942  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgt 177  Q
    |||||||| |||||||||||||||||| |||| |||||||| || |||||| |||||||||||||||||||||||||    
T  55431941 aacagttacagaatctctatataaatagaggactccactcaatttaaaaaatacaccaaagagtttcattgagttgt 55431865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 27 - 183
Target Start/End: Complemental strand, 46964798 - 46964642
Alignment:
Q  27 tgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaat 126  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||    
T  46964798 tgttgaattgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttactaaaatagttactgaatctctatataaat 46964699  T
Q  127 aaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    | |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46964698 agaggactccactcagttcaaaaatcacaccaaagagtttcattgagttgtcgggaa 46964642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 20520769 - 20520594
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20520769 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtatctgttgtcgcaatttttgctaa 20520670  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttg 176  Q
    ||| |||| | |||||| ||||||||| |||| |||||||||||| ||||  ||||||||||||||||||||||||    
T  20520669 aacggttacaaaatctcgatataaatagaggactccactcagttccaaaattacaccaaagagtttcattgagttg 20520594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 14437983 - 14438132
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14437983 tttcttttgatcctatccacaagttttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 14438082  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| |||| | |||| ||||||||||    
T  14438083 aacagttacagaatctctatataaatagaggacttcacttagttcaaaaa 14438132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 18468024 - 18467875
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||| ||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18468024 tttcttttgatcatatccgcaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 18467925  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  18467924 aacagttacagaatctctatataaatagaggattccacttagttcaaaaa 18467875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 18472818 - 18472669
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18472818 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 18472719  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    ||||||||  |||||| |||||||||| ||||||||||| ||||||||||    
T  18472718 aacagttaccgaatctatatataaatagaggattccacttagttcaaaaa 18472669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 32473307 - 32473452
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||||||||   |||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  32473307 tttcttttgatcctatccacaaatgttgttgaactgattaatggataaactccattttaatcttatccattagagtaattgttgtcgcaatttttgctaa 32473406  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttca 146  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||    
T  32473407 aacagttacagaatctctatataaatagaggactccactaagttca 32473452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 12965171 - 12965352
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||||||||  ||||||||||  |||||||||||  |   |||| ||||||||||||||||||||||| | ||||||||||| |||    
T  12965171 tttcttttgatcttatccacaagtgttgttgaactggttaatggataagttctcttttgatcttatccattagagtaactgt-gccgcaatttttgttaa 12965269  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||||| || |||||||||||||||||  |||| ||||||||| ||||||||||||||||    
T  12965270 aacagttacaaaatctctatataaataaaagactccactcagttcaaaaattacacaaaagagttttattgagttgtcgggaa 12965352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 23660824 - 23660929
Alignment:
Q  79 ctgttgtcgcaatttttgctaaaacagttatagaatctctatataaataaaggattccactcagttc-aaaaaacacaccaaagagtttcattgagttgt 177  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  23660824 ctgttgtcgcaatttttgctaaaacagttacagaatctctatataaatagaggactccactcagttcaaaaaaacacaccaaagagtttcattgagttgt 23660923  T
Q  178 cgggaa 183  Q
    ||||||    
T  23660924 cgggaa 23660929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 12111895 - 12112022
Alignment:
Q  5 ttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaaca 104  Q
    ||||||| ||||| |||||  |||||||||| ||||||||||||  | | |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  12111895 ttttgatcctatctacaagtgttgttgaactgattaatggataagttcctttttaatcttatccattagagtaattgttgccgcaatttttgctaaaaca 12111994  T
Q  105 gttatagaatctctatataaataaagga 132  Q
    |||| | |||||||||||||||| ||||    
T  12111995 gttacaaaatctctatataaatagagga 12112022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12971098 - 12971207
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||  |   |||| |||||||| |||||||||||||||| |||||||||||||||    
T  12971098 tttcttttgatcctatccacaagtgttgttgaactgattaatggataagttctctttttatcttatcaattagagtaactgttgccgcaatttttgctaa 12971197  T
Q  101 aacagttata 110  Q
    || |||||||    
T  12971198 aatagttata 12971207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 29350913 - 29350871
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29350913 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 29350871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 2207222 - 2207261
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2207222 agttcaaaaaacacaccaaagagtttcattgagttgtcgg 2207261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 24037799 - 24037836
Alignment:
Q  146 aaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24037799 aaaaaacacaccaaagagtttcattgagttgtcgggaa 24037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23660773 - 23660823
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaact 51  Q
    ||||||||||||||||||| |||  |||||||||| |||||||||||||||    
T  23660773 tttcttttgattctatccataagtgttgttgaactgattaatggataaact 23660823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 20508406 - 20508256
Alignment:
Q  29 ttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaa-acagttatagaatctctatataaata 127  Q
    ||||||| |||||||| | |  ||| |||| ||||||||||| ||||||||| |||||||||| ||| | ||| ||| ||  | | ||||||||  ||||    
T  20508406 ttgaactcattaatgggttagtttccttttgatcttatccataagagtaactattgtcgcaatctttaccaaatacaatttcaaagtctctata--aata 20508309  T
Q  128 aagg-attccactcagttcaaaaaa-cacaccaaagagtttcattgagttgtc 178  Q
    |||| |||| |||  |||||||||| |||||||||||||| ||||||||||||    
T  20508308 aagggattctactatgttcaaaaaaacacaccaaagagttccattgagttgtc 20508256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 8e-73; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 6407144 - 6407326
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6407144 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaacttcattttaatcttatccattagagtaattgttgtcgcaatttttgctaa 6407243  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  6407244 aacagttacagaatctctatataaatagaggactccactcaattcaaaaaacacatcaaagagtttcattgagttgttgggaa 6407326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 11559499 - 11559675
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11559499 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttatcgcaatttttgctaa 11559598  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgt 177  Q
    |||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11559599 aacagttacagaatctctttataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgagttgt 11559675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 14509785 - 14509603
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||| || |||||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  14509785 tttctttttatcctatccacaagtgttgttgaactgattaatggataaacttcattttaatcttatacattagagtaattgttgtcgcaatttttgctaa 14509686  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||| ||| | ||||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14509685 aacatttacaaaatctctttataaatagaggactccactaagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 14509603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 11533989 - 11534165
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||||||    
T  11533989 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgctaccgcaatttttgctaa 11534088  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgt 177  Q
    |||||||| ||||||||| |||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||    
T  11534089 aacagttacagaatctctttataaatagaggacttcactcagttcaaaaaacacaccaaagagtttcattgagttgt 11534165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 16835447 - 16835623
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||        
T  16835447 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccactagagtaactgttgtcgcaatttttg---- 16835542  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
      |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16835543 --cagttacagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 16835623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 20747585 - 20747764
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  20747585 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgctgtcacaatttttgctaa 20747684  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    ||||||||   |||||||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||||    
T  20747685 aacagttaccaaatctctatataaatagaggactccactcagttaaaaaatcacaccaaagagtttcattgagttgtcgg 20747764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 25313736 - 25313918
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  |||| |||||  |||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  25313736 tttcttttgatcatatcaacaagtgttgttgaactgattaatggataaactcctttttaatcttatccattagagtaactgttgtcacaatttttgctaa 25313835  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| | || || ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  25313836 aacagttacagaatctctatataaatagatgactcaacttagttcaaaaaatacaccaaagagtttcattgagttgtcgggaa 25313918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 26201230 - 26201412
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  |||| |||||  |||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  26201230 tttcttttgatcatatcaacaagtgttgttgaactgattaatggataaactcctttttaatcttatccattagagtaactgttgtcacaatttttgctaa 26201329  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| | || || ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  26201330 aacagttacagaatctctatataaatagatgactcaacttagttcaaaaaatacaccaaagagtttcattgagttgtcgggaa 26201412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 4156661 - 4156816
Alignment:
Q  28 gttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaata 127  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||| ||||||| ||||||||||    
T  4156661 gttgaactgattaatggataaacttcattttaatcttacccattagagtaactcttgttgcaatttttgctaaaacagttacagaatctatatataaata 4156760  T
Q  128 aaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    ||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  4156761 aaggactccactcagttcaaaaattacaccaaaaagtttcattgagttgtcgggaa 4156816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 11428773 - 11428590
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  11428773 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgctatcgtaatttttgctaa 11428674  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaa-aaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    || ||||| | |||||||||||||||| |||| |||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  11428673 aagagttacaaaatctctatataaatagaggactccactcagttcaaaaaaacacatcaaaaagtttcattgagttgtcgggaa 11428590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 2699376 - 2699558
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||| || |||||||||||  |||||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  2699376 tttcttttaatcctatccacaagtgttgttgaactgattaatggataaactcaattttaatcttatccattagagtaactgctgtcgcaatttttactaa 2699475  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| |||| | ||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  2699476 aacagttacaaaatctctatataaatagaggaattcactcagttcaaaaaacacaccaaatagtttcatttagttgttgggaa 2699558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 33686931 - 33687112
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  |||||||||   |||| ||||| ||||||||||||||| | ||||||||||| ||||||||||||||| |||||||||||||| |||    
T  33686931 tttcttttgatcatatccacaactgttgtcgaactgattaatggataaactcccttttaatcttaaccattagagtaactgctgtcgcaatttttgttaa 33687030  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||| ||| |||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33687031 aacaattacagaatctctatataaatagaggactccactcagttc-aaaaacacaccaaagagtttcattgagttgtcgggaa 33687112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 17963842 - 17963991
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||| || |||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  17963842 tttcttttaatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttggtaa 17963941  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  17963942 aacagttacagaatctctatataaataaaggactccacttagttcaaaaa 17963991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8748572 - 8748423
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| ||||||||||   |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  8748572 tttcttttgatcctatccacaattgttgttgaactgattaatggataaactccattttaatcttatccattagagtaattgttgtctcaatttttgctaa 8748473  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  8748472 aacagttacagaatctctatataaatagaggactccacttagttcaaaaa 8748423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 5856793 - 5856610
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  |||||| |||  ||||||| || ||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  5856793 tttcttttgatcatatccataagtgttgttgatctgattaatggataaactccattttaatcttatccattagagaaactactgtcgcaatttttgctaa 5856694  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagtt-caaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    || ||||| | |||||||||||||||| |||| || ||||||||  |||||| ||| |||||||| |||||||||||| |||||    
T  5856693 aatagttacaaaatctctatataaatagaggactctactcagttaaaaaaaaaacatcaaagagtatcattgagttgttgggaa 5856610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 19994705 - 19994845
Alignment:
Q  26 ttgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaa 125  Q
    |||||||||| ||||||||||||  | | |||| |||||||| ||||||||| ||| ||||| |||||||||||||||||||| | ||||||||||||||    
T  19994705 ttgttgaactgattaatggataatttacctttttatcttatcaattagagtatctgatgtcgtaatttttgctaaaacagttacaaaatctctatataaa 19994804  T
Q  126 taaaggattccactcagttcaaaaaacacaccaaagagttt 166  Q
    || |||| |||||||||||||||||  ||||||||||||||    
T  19994805 tagaggactccactcagttcaaaaattacaccaaagagttt 19994845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 22694683 - 22694827
Alignment:
Q  36 tattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaataaaggattc 135  Q
    |||| ||||||||  | |||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||| | |||||||    
T  22694683 tattcatggataagttccattttgatcttatctattagagtaattgttgccgcaatttttgctaaaacagttacaaaatctctatataaacagaggattc 22694782  T
Q  136 cactcagttcaaaaaacacaccaaagagtttc-attgagttgtcg 179  Q
    |||| |||||||||| |||||||||||||||| ||||| ||||||    
T  22694783 cactaagttcaaaaatcacaccaaagagtttctattgacttgtcg 22694827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 17600184 - 17600001
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgc----aatttttg 96  Q
    ||||||||||| |||||||||||  |||||||||| ||||||| ||||  ||  |||| |||||||||||| |||||||||||| |||    |||||||     
T  17600184 tttcttttgatcctatccacaagtgttgttgaactgattaatgaataagttttcttttgatcttatccatttgagtaactgttgccgcaattaattttta 17600085  T
Q  97 ctaaaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttc-attgagttgtcg 179  Q
    |||||| | ||| | |||||||| ||||||| |||| | ||||||||||||||| ||||| |||||||||| ||||||||||||    
T  17600084 ctaaaaaaattacaaaatctctaaataaatagaggacttcactcagttcaaaaatcacactaaagagtttctattgagttgtcg 17600001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 17914394 - 17914239
Alignment:
Q  5 ttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaaca 104  Q
    |||||||  ||||||||||  |||||||||| ||||||||||||  |||||||| || |||||| |||||||||||  |  ||||||||||||||||| |    
T  17914394 ttttgatattatccacaagtgttgttgaactgattaatggataagtttcattttgatattatccgttagagtaacttctaccgcaatttttgctaaaaaa 17914295  T
Q  105 gttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaa 160  Q
    |||| | ||||||||||| |||| |||| ||| ||||||||||||| || ||||||    
T  17914294 gttacaaaatctctatattaatagaggactcccctcagttcaaaaatcaaaccaaa 17914239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11569980 - 11570073
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttt 94  Q
    ||||||||||| ||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | || |||||||    
T  11569980 tttcttttgatcctatctacaagtattgttgaactgattaatggataaactccattttaatcttatccattagagtaactgctatcacaatttt 11570073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 11570136 - 11570201
Alignment:
Q  110 agaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagtt 175  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  11570136 agaatctctttataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgagtt 11570201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 11613192 - 11613287
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttg 96  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||  |   |||| ||||||||||||||||||||||||||| ||| |||||    
T  11613192 tttcttttgatcctatccacaagtgttgttgaactgattaatggataagatcttttttgatcttatccattagagtaactgttgtcacaacttttg 11613287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 12405650 - 12405823
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcatttta-atcttatccattagagtaactgttgtcgcaatttttgcta 99  Q
    |||||||| || |||||  ||||  |||||||||| || |||||||||  ||||||||  || |||||||||||| |||||| |  || |||||||||||    
T  12405650 tttcttttaatcctatctgcaagtgttgttgaactgataaatggataagtttcattttttattttatccattagaataactgctaccgtaatttttgcta 12405749  T
Q  100 aaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttc-attgagttgtcg 179  Q
    | |||       ||||| |||||||||| |  | |||||||| |||||||||||||||||| |||||| ||||||||||||    
T  12405750 acaca-------aatctttatataaatagaaaactccactcaattcaaaaaacacaccaaaaagtttcaattgagttgtcg 12405823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 19674459 - 19674417
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  19674459 agttcaaaaatcacaccaaagagtttcattgagctgtcgggaa 19674417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 12689641 - 12689607
Alignment:
Q  146 aaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    |||||| ||||||||||||||||||||||||||||    
T  12689641 aaaaaagacaccaaagagtttcattgagttgtcgg 12689607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 8e-73; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 16648918 - 16649100
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||| ||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16648918 tttcttttgatcctattcacaagtgttgttgaactgattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgttaa 16649017  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    || ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16649018 aatagttacagaatctctatataaatagaggactccactcagttcaaaaaacacaccaaaaagtttcattgagttgtcgggaa 16649100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 38621520 - 38621338
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  |||| |||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38621520 tttcttttgatcatatctacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 38621421  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38621420 aacagttacaaaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 38621338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 19798283 - 19798465
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||| |||| |  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19798283 tttcttttgatcctattcacatgtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgttgcaatttttgctaa 19798382  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19798383 aacagttacagaatctctatataaatagaggactccactcagttcaaaaaatacaccaaagagtttcattgagttgtcgggaa 19798465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 47450507 - 47450689
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  47450507 tttcttttgattctatccacaagtgttgttgaactgattaatggataaactctattttaatcttatccattagagtaactgttgtcacaatttttgctaa 47450606  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  47450607 aacagttacagaatctctatataaatagaggactccactcagtttaaaaaacacatcaaagagtttcattgagttatcgggaa 47450689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 25844568 - 25844385
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||| |||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25844568 tttcctttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccactagagtaactgttgtcgcaatttttgctaa 25844469  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttc-aaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  25844468 aacagttacagaatctctatataaatagaggactccactcggttcaaaaaaacacaccaaagagtttcattgagttgtcgggaa 25844385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 33300526 - 33300708
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||  |||||   |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  33300526 tttcttttgatcctactcacaactgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgctgttgcaatttttgctaa 33300625  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33300626 aacagttacaaaatctctatataaatagaggactccactcagttcaaaaaacacaccaaagagtttcattgaattgtcgggaa 33300708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 16834287 - 16834105
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||| |||||| ||||||||||   |||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  16834287 tttcctttgatcctatccacaaatgttgttgaactgattaatgcataaacttcattttaatcttatccattagagtaattgttatcgcaattttggctaa 16834188  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| | |||||||||||||||| |||| |||||| |||||||| || |||||||||||||||||||||||||||||||    
T  16834187 aacagttacaaaatctctatataaatagaggactccacttagttcaaacaatacaccaaagagtttcattgagttgtcgggaa 16834105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 39200045 - 39200226
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  39200045 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccgttagagtaactgctgtcgcaatttttgctaa 39200144  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    ||||| || | |||||||||||||||| |||| ||||||  |||  |||||||||||||||||||||||||||||||||||||    
T  39200145 aacagctacataatctctatataaatagaggactccacttggtt-taaaaacacaccaaagagtttcattgagttgtcgggaa 39200226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10136137 - 10135988
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10136137 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 10136038  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  10136037 aacagttacagaatctctatataaatagaggactccacttagttcaaaaa 10135988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 26927004 - 26927153
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26927004 tttcttttgatcctatccacaagtgttgttgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 26927103  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  26927104 aacagttacagaatctctatataaatagaggactccacttagttcaaaaa 26927153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10140905 - 10140756
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  ||||||||||  || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10140905 tttcttttgatcatatccacaagtgttattgaactgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 10140806  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| ||||||||| |||||||| |||| |||||| | ||||||||    
T  10140805 aacagttacagaatctctgtataaatagaggactccacttaattcaaaaa 10140756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 51040805 - 51040936
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||| ||||||  ||||||||||  |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51040805 tttcatttgatcttatccacaagtgttgttgaactgattaatggataaacttcattttaattttatccattagagtaactgttgtcgcaatttttgctaa 51040904  T
Q  101 aacagttatagaatctctatataaataaagga 132  Q
    |||||||| |||||||||||||||||| ||||    
T  51040905 aacagttacagaatctctatataaatagagga 51040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 179
Target Start/End: Complemental strand, 20108138 - 20107984
Alignment:
Q  26 ttgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaatctctatataaa 125  Q
    |||||||||| ||||||||||||  |   |||||||||||||||||| |||||||||||| | |||||||||||||||||||| | ||||||||||||||    
T  20108138 ttgttgaactaattaatggataagttcttttttaatcttatccattaaagtaactgttgttgtaatttttgctaaaacagttaaaaaatctctatataaa 20108039  T
Q  126 taaaggattccactcagttcaaaaaacacaccaaagagtttc-attgagttgtcg 179  Q
    || |||| || ||||||||| ||||  ||||||||||| ||| ||||||||||||    
T  20108038 tataggactctactcagttctaaaattacaccaaagagattctattgagttgtcg 20107984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8138430 - 8138281
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    |||||||||||  |||| |||||  |||||||||| ||||||||||||  | | |||| ||||||||| |||||||||||  ||  |||| |||||||||    
T  8138430 tttcttttgatcttatctacaagtgttgttgaactcattaatggataagttcccttttgatcttatccgttagagtaactactgctgcaacttttgctaa 8138331  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttcaaaaa 150  Q
    |||||||| | |||||||||||||||| || | | |||||||||||||||    
T  8138330 aacagttacaaaatctctatataaatagagaacttcactcagttcaaaaa 8138281  T

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Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 10999271 - 10999354
Alignment:
Q  96 gctaaaacagttatagaatctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcg 179  Q
    ||||||| | |||||||||||| ||||||| | |||| |||||| |||||||||| ||||||||| | ||| ||||||||||||    
T  10999271 gctaaaataattatagaatctccatataaacagaggagtccacttagttcaaaaatcacaccaaataattttattgagttgtcg 10999354  T

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Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 23192251 - 23192291
Alignment:
Q  143 ttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  23192251 ttcaaaaattacaccaaagagtttcattgagttgtcgggaa 23192291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 11806961 - 11806898
Alignment:
Q  113 atctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttc-attgagtt 175  Q
    ||||||||||||||| |||| |||||||| ||||||||  || |||||||||||| ||||||||    
T  11806961 atctctatataaatagaggactccactcatttcaaaaattacgccaaagagtttctattgagtt 11806898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 39587781 - 39587823
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||    
T  39587781 agttcaaaaaacacactaaatagtttcattgagttgtcaggaa 39587823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 40166636 - 40166594
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    ||||||||||  ||||| |||||||||||||||||||||||||    
T  40166636 agttcaaaaattacacctaagagtttcattgagttgtcgggaa 40166594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 7920 - 7737
Alignment:
Q  1 tttcttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 100  Q
    ||||||||||| |||||||||||  ||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7920 tttcttttgatcctatccacaagtgttgttgaactgtttaatggataaactccattttaatcttatccattagagtaactgttgtcgcaatttttgctaa 7821  T
Q  101 aacagttatagaatctctatataaataaaggattccactcagttc-aaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||| |||||||||||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  7820 aacagttacagaatctctatataaatagaggactccactcggttcaaaaaaacacaccaaagagtttcattgagttgtcgggaa 7737  T

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Target: scaffold0054 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 180
Target Start/End: Complemental strand, 29975 - 29809
Alignment:
Q  13 ctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttataga 112  Q
    |||||||||||  |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29975 ctatccacaagtgttgttgaattgattaatggataaactccattttaatcttatccattagagtaactgttgtcgcaattttttctaaaacagttataga 29876  T
Q  113 atctctatataaataaaggattccactcagttcaaaaaacacaccaaagagtttcattgagttgtcgg 180  Q
    ||||||||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||||||||    
T  29875 atctctatataaatagaggactccaatcagttca-aaaacacaccaaagagtttcattgagttgtcgg 29809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 26128 - 26086
Alignment:
Q  141 agttcaaaaaacacaccaaagagtttcattgagttgtcgggaa 183  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  26128 agttcaaaaatcacaccaaagagtttcattgagttgccgggaa 26086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 35932 - 35812
Alignment:
Q  5 ttttgattctatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaaca 104  Q
    ||||||| |||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  35932 ttttgatcctatccacaagtgttgttgaaatgattaatggataaacttcattttaatcttatccattagagtaactgctgtcgcaatgtttgctaaaaca 35833  T
Q  105 gttatagaatctctatataaa 125  Q
    |||| | ||| ||||||||||    
T  35832 gttacaaaatttctatataaa 35812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 6025 - 5862
Alignment:
Q  14 tatccacaaggattgttgaacttattaatggataaacttcattttaatcttatccattagagtaactgttgtcgcaatttttgctaaaacagttatagaa 113  Q
    ||||||||||  |||||||||| |||||| ||||   |||  ||| |||||||||||||||| |  ||  | ||||||||||||||||||||||| | ||    
T  6025 tatccacaagtgttgttgaactgattaatagatagt-ttccgtttgatcttatccattagagcatttg--ggcgcaatttttgctaaaacagttacaaaa 5929  T
Q  114 tctctatataaataaaggattccactcagttcaaaaaacacaccaaagag-tttcattgagttgtcg 179  Q
    |||||||||||||| |||| |||||| ||||| ||| | ||||||||||| ||| ||||||||||||    
T  5928 tctctatataaatagaggactccacttagttcgaaagagacaccaaagagtttttattgagttgtcg 5862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 4772 - 4635
Alignment:
Q  14 tatccacaaggattgttgaacttattaatggataaacttcattttaatctt-atccattagagtaactgttgtcgcaatttttgctaaaacagttataga 112  Q
    ||||||||||  |||||||||| ||||||||||||  | |||||| ||||| ||||||||||||||||  |   | |||||||||||||||| ||| | |    
T  4772 tatccacaagtgttgttgaactgattaatggataagttccattttcatctttatccattagagtaactactactgtaatttttgctaaaacaattacaaa 4673  T
Q  113 atctctatataaataaaggattccactcagttcaaaaa 150  Q
    ||||||||||| | | |||| |||||||||||||||||    
T  4672 atctctatatatacagaggactccactcagttcaaaaa 4635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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