View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10261_low_38 (Length: 241)
Name: NF10261_low_38
Description: NF10261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10261_low_38 |
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Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 4188570 - 4188348
Alignment:
| Q |
19 |
tggagccccaaattaaagaagatacttgga-cctataaatcatttattttacaaactttgatgcaaatttatggccctaatccatatttattaagctaga |
117 |
Q |
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| T |
4188570 |
tggagccccaaattaaagaagatacgtggaacctataaatcatttattttacaaactttgatgcaaatttatggccctaatccatatatattaagctaga |
4188471 |
T |
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| Q |
118 |
tagagacacaaaaggggagttaaaggcaacggtggatccacccatttgagtctattccaaataaaatacattattgtcattttcttctacttcaatatag |
217 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4188470 |
cagagacacaaaaggggagttaaaggcaatggtggatccacccatttgagtctattccaaataaaatacattattgtcattttcttctacttcaatatag |
4188371 |
T |
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| Q |
218 |
aactagtaactttcccctaagcc |
240 |
Q |
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| T |
4188370 |
aactagtaactttcccctaagcc |
4188348 |
T |
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