View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10262_high_1 (Length: 484)
Name: NF10262_high_1
Description: NF10262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10262_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 446; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 19 - 472
Target Start/End: Original strand, 8277377 - 8277830
Alignment:
| Q |
19 |
aatggatgcagtgttgatgctattcagctagaagagtgtcatttttctaaactgcaatttggaacgacaaagtatgatttggttgcaccaaattggagct |
118 |
Q |
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| T |
8277377 |
aatggatgcagtgttgatgctattcagctagaagagtgtcatttttctaaactgcaatttggaacgacaaagtatgatttggttgcaccaaattggagct |
8277476 |
T |
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| Q |
119 |
caagtgaagaggaggaaaaggaaatatcgaaaagtttgagacataatgctagtttgaaagccgattctgattgtatagctgccagttgggaagaagatga |
218 |
Q |
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| T |
8277477 |
caagtgaagaggaggaaaaggaaatatcgaaaagtttgagacataatgctagtttgaaagccgattctgattgtatagctgccagttgggaagaagatga |
8277576 |
T |
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| Q |
219 |
gaagaacaagtgctgtcttaggtaactaaactataccttacaaaccaatgttttaaaaatttaatcgaaaagttcaattggttgaaccgtgaaccacact |
318 |
Q |
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| T |
8277577 |
gaagaacaagtgctgtcttaggtaactaaactataccttacaaaccaatgttttaaaaatttaatcgaaaagttcaattggttgaaccgtgaaccacact |
8277676 |
T |
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| Q |
319 |
ttcttcacttaggttattttagcggttcaatcgtgattttgttctgattttaagtagttgaaccttgacctgatgccggtttgatttttaaaacattgct |
418 |
Q |
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| T |
8277677 |
ttcttcacttaggttattttagctgttcaatcgtgattttgttctgattttaagtagttgaacattgacctgatgccggtttgatttttaaaacattgct |
8277776 |
T |
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| Q |
419 |
tacaatttaactgctaaaacgaccattttcgtcgatgaactgacaccttacctt |
472 |
Q |
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| T |
8277777 |
tacaatttaactgctaaaacgaccattttcgtcgatgaactgacaccttacctt |
8277830 |
T |
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