View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10262_low_15 (Length: 242)
Name: NF10262_low_15
Description: NF10262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10262_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 32540486 - 32540704
Alignment:
| Q |
8 |
actaatggactaacatttctaaactcattcatgacagtcctccaaaggacactgcatctcatcttactgatcatgtaacagaacagactattagaaaatc |
107 |
Q |
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| T |
32540486 |
actaatggactaacatttctaaacccattcatgacagtcctccaaaggacactgcatctcatcttactgatcatgtaacagaacagactattagaaaatc |
32540585 |
T |
|
| Q |
108 |
aactaatagtgaagtagaaaggtaaaaggcaagacttgtagtcgaaggatatacttaacttgaaggtatagatttcttcgaaactaaattgaccatatta |
207 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32540586 |
aactaatagtgaagtagaaaggtaaaaggaaagacttgtagtcgaaggatatacttaacttgaaggtatagatttcttcgaaactaaattgaccatatta |
32540685 |
T |
|
| Q |
208 |
agattaattctttctattt |
226 |
Q |
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||||||||||||||||||| |
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| T |
32540686 |
agattaattctttctattt |
32540704 |
T |
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