View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10262_low_5 (Length: 326)

Name: NF10262_low_5
Description: NF10262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10262_low_5
NF10262_low_5
[»] chr1 (1 HSPs)
chr1 (190-224)||(31867824-31867858)


Alignment Details
Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 31867824 - 31867858
Alignment:
190 tttgtttgtttgtgaaagagctctgttaatgggca 224  Q
    |||||||||||||||||||||||||||||||||||    
31867824 tttgtttgtttgtgaaagagctctgttaatgggca 31867858  T

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