View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10262_low_9 (Length: 265)

Name: NF10262_low_9
Description: NF10262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10262_low_9
NF10262_low_9
[»] chr1 (40 HSPs)
chr1 (116-224)||(3377497-3377607)
chr1 (133-224)||(49426200-49426291)
chr1 (120-211)||(14978797-14978889)
chr1 (117-224)||(17760679-17760790)
chr1 (122-224)||(18632319-18632421)
chr1 (119-211)||(12960845-12960938)
chr1 (106-217)||(17692713-17692825)
chr1 (118-207)||(50226390-50226481)
chr1 (121-224)||(16874711-16874816)
chr1 (142-224)||(50401393-50401477)
chr1 (120-211)||(3377733-3377825)
chr1 (120-211)||(14979022-14979114)
chr1 (117-224)||(30849438-30849546)
chr1 (120-224)||(32295161-32295267)
chr1 (117-183)||(51250482-51250549)
chr1 (123-224)||(8009732-8009834)
chr1 (123-224)||(12961053-12961155)
chr1 (119-212)||(45738935-45739029)
chr1 (164-224)||(39642416-39642477)
chr1 (117-211)||(46573048-46573144)
chr1 (121-212)||(5287795-5287887)
chr1 (119-208)||(25085398-25085488)
chr1 (118-217)||(7579661-7579763)
chr1 (126-209)||(25085616-25085698)
chr1 (117-167)||(43600402-43600452)
chr1 (179-220)||(1853665-1853705)
chr1 (138-216)||(7579879-7579958)
chr1 (122-183)||(18632590-18632651)
chr1 (118-216)||(39642198-39642298)
chr1 (179-224)||(44436818-44436863)
chr1 (155-211)||(45739157-45739212)
chr1 (123-224)||(46572830-46572932)
chr1 (119-217)||(27864370-27864472)
chr1 (118-209)||(3612409-3612504)
chr1 (122-211)||(23891662-23891752)
chr1 (110-167)||(7764013-7764070)
chr1 (131-224)||(44672326-44672418)
chr1 (122-224)||(1096469-1096573)
chr1 (124-180)||(6320562-6320618)
chr1 (123-187)||(6320828-6320891)
[»] chr7 (46 HSPs)
chr7 (119-224)||(15107200-15107304)
chr7 (119-224)||(41243643-41243748)
chr7 (123-222)||(23745897-23745996)
chr7 (120-211)||(36903492-36903581)
chr7 (122-217)||(47909696-47909792)
chr7 (119-224)||(42256581-42256690)
chr7 (123-211)||(6792017-6792107)
chr7 (110-224)||(14247284-14247399)
chr7 (118-217)||(15347952-15348049)
chr7 (120-211)||(20505232-20505323)
chr7 (124-212)||(21505837-21505927)
chr7 (119-224)||(20184915-20185023)
chr7 (122-224)||(5172513-5172617)
chr7 (123-224)||(18504246-18504349)
chr7 (116-210)||(28350112-28350208)
chr7 (113-224)||(36580483-36580595)
chr7 (142-224)||(3381885-3381968)
chr7 (109-211)||(20185138-20185240)
chr7 (112-192)||(28472382-28472461)
chr7 (121-224)||(36903261-36903368)
chr7 (109-211)||(4049943-4050046)
chr7 (119-224)||(28785963-28786072)
chr7 (119-224)||(35250118-35250224)
chr7 (119-220)||(3318317-3318418)
chr7 (123-224)||(4049709-4049815)
chr7 (120-224)||(15029058-15029167)
chr7 (123-224)||(18186659-18186763)
chr7 (179-224)||(44312950-44312995)
chr7 (112-171)||(9477125-9477184)
chr7 (123-209)||(9500124-9500213)
chr7 (114-173)||(11742704-11742763)
chr7 (173-224)||(13889672-13889723)
chr7 (139-211)||(18186458-18186532)
chr7 (123-178)||(20505101-20505156)
chr7 (118-177)||(33159482-33159541)
chr7 (140-211)||(35250341-35250411)
chr7 (123-209)||(46265868-46265955)
chr7 (119-224)||(17931938-17932041)
chr7 (120-210)||(48059168-48059260)
chr7 (158-211)||(8662836-8662891)
chr7 (177-217)||(11374182-11374222)
chr7 (116-184)||(17876407-17876475)
chr7 (116-216)||(18504457-18504557)
chr7 (120-211)||(36580274-36580366)
chr7 (109-224)||(45717889-45718004)
chr7 (103-224)||(48058844-48058967)
[»] chr3 (55 HSPs)
chr3 (120-212)||(54719217-54719309)
chr3 (111-224)||(38957836-38957952)
chr3 (121-223)||(43586770-43586872)
chr3 (123-216)||(86578-86671)
chr3 (119-224)||(51315692-51315799)
chr3 (118-224)||(25902561-25902669)
chr3 (123-224)||(44585994-44586097)
chr3 (119-224)||(44433272-44433381)
chr3 (118-211)||(28712683-28712777)
chr3 (123-217)||(25154183-25154279)
chr3 (120-217)||(25248692-25248789)
chr3 (108-224)||(50802647-50802764)
chr3 (108-224)||(50873113-50873230)
chr3 (119-211)||(15978913-15979005)
chr3 (119-211)||(25154402-25154496)
chr3 (119-224)||(14349320-14349423)
chr3 (113-224)||(17773163-17773275)
chr3 (113-224)||(19074464-19074576)
chr3 (121-211)||(19404399-19404489)
chr3 (121-224)||(54464163-54464268)
chr3 (118-224)||(3916429-3916535)
chr3 (121-212)||(1814774-1814866)
chr3 (122-217)||(8024997-8025093)
chr3 (120-208)||(20432409-20432497)
chr3 (123-224)||(48348466-48348569)
chr3 (110-211)||(28944187-28944289)
chr3 (121-211)||(47189599-47189689)
chr3 (119-211)||(38958066-38958158)
chr3 (122-217)||(22494555-22494651)
chr3 (109-180)||(36677770-36677841)
chr3 (119-224)||(3192990-3193096)
chr3 (119-224)||(14340942-14341047)
chr3 (123-180)||(7218409-7218466)
chr3 (124-224)||(15976242-15976343)
chr3 (112-202)||(20432182-20432274)
chr3 (121-211)||(27178141-27178232)
chr3 (123-217)||(27178362-27178458)
chr3 (131-184)||(29512558-29512611)
chr3 (116-224)||(33329825-33329940)
chr3 (120-193)||(38177178-38177251)
chr3 (179-224)||(47189802-47189847)
chr3 (120-192)||(53184758-53184831)
chr3 (123-208)||(578637-578722)
chr3 (123-211)||(4474291-4474378)
chr3 (109-180)||(36687849-36687920)
chr3 (164-224)||(44436606-44436668)
chr3 (110-184)||(86814-86888)
chr3 (115-212)||(28712451-28712548)
chr3 (123-224)||(34336399-34336498)
chr3 (120-208)||(3192774-3192862)
chr3 (122-167)||(19404661-19404706)
chr3 (179-224)||(43747488-43747533)
chr3 (110-150)||(12759493-12759533)
chr3 (155-211)||(25248908-25248964)
chr3 (120-184)||(33329611-33329675)
[»] chr8 (39 HSPs)
chr8 (120-216)||(22846658-22846756)
chr8 (118-224)||(23702343-23702450)
chr8 (119-224)||(20853377-20853482)
chr8 (119-224)||(32071223-32071326)
chr8 (119-224)||(41602819-41602926)
chr8 (117-224)||(29044755-29044862)
chr8 (119-205)||(28349535-28349622)
chr8 (123-211)||(41487431-41487520)
chr8 (114-224)||(37939908-37940017)
chr8 (123-184)||(25896993-25897054)
chr8 (120-208)||(36688223-36688311)
chr8 (112-224)||(35213023-35213134)
chr8 (122-224)||(29657702-29657809)
chr8 (117-217)||(39889988-39890090)
chr8 (118-217)||(44269334-44269433)
chr8 (120-224)||(45177201-45177307)
chr8 (155-216)||(25144159-25144219)
chr8 (122-224)||(26823828-26823932)
chr8 (119-224)||(37263546-37263650)
chr8 (120-224)||(6807377-6807480)
chr8 (123-167)||(20699460-20699504)
chr8 (119-224)||(30539199-30539305)
chr8 (112-211)||(22192519-22192618)
chr8 (117-203)||(37813159-37813247)
chr8 (117-211)||(41487197-41487293)
chr8 (112-211)||(17070899-17070999)
chr8 (112-211)||(17577273-17577373)
chr8 (108-209)||(18093302-18093404)
chr8 (118-224)||(14880334-14880441)
chr8 (121-211)||(33298558-33298646)
chr8 (119-184)||(6807172-6807237)
chr8 (164-224)||(16982818-16982881)
chr8 (119-192)||(27545343-27545415)
chr8 (179-224)||(37813299-37813344)
chr8 (120-211)||(9762422-9762513)
chr8 (121-184)||(15181640-15181703)
chr8 (123-211)||(29657922-29658009)
chr8 (119-211)||(39889771-39889863)
chr8 (119-167)||(45515932-45515980)
[»] chr5 (42 HSPs)
chr5 (113-224)||(19131708-19131819)
chr5 (120-224)||(32391927-32392033)
chr5 (117-224)||(37897926-37898034)
chr5 (119-224)||(27904691-27904798)
chr5 (120-224)||(3333909-3334015)
chr5 (119-211)||(12406040-12406134)
chr5 (120-217)||(25363825-25363924)
chr5 (113-224)||(36798163-36798277)
chr5 (118-211)||(36798397-36798492)
chr5 (121-211)||(43098248-43098337)
chr5 (123-224)||(8284158-8284259)
chr5 (117-217)||(40276244-40276347)
chr5 (109-224)||(12406248-12406365)
chr5 (122-217)||(20629959-20630057)
chr5 (123-224)||(31080480-31080582)
chr5 (118-224)||(22300599-22300706)
chr5 (122-224)||(30604295-30604399)
chr5 (112-177)||(41138553-41138618)
chr5 (119-183)||(25910720-25910783)
chr5 (108-211)||(35166285-35166388)
chr5 (116-167)||(24779271-24779322)
chr5 (120-217)||(40132904-40133003)
chr5 (118-211)||(19340762-19340853)
chr5 (122-203)||(25910955-25911037)
chr5 (119-211)||(2974854-2974949)
chr5 (120-192)||(6131777-6131849)
chr5 (123-217)||(24134371-24134467)
chr5 (119-184)||(34319959-34320023)
chr5 (123-167)||(24405493-24405537)
chr5 (119-196)||(26562989-26563068)
chr5 (116-184)||(40276014-40276082)
chr5 (123-209)||(20629739-20629828)
chr5 (120-212)||(21066375-21066469)
chr5 (145-224)||(26702464-26702541)
chr5 (145-224)||(26972197-26972274)
chr5 (125-183)||(3999345-3999403)
chr5 (119-211)||(35166514-35166608)
chr5 (123-211)||(3333695-3333784)
chr5 (116-192)||(3999082-3999159)
chr5 (171-216)||(37897770-37897815)
chr5 (155-210)||(16132951-16133009)
chr5 (123-211)||(25364048-25364136)
[»] chr4 (70 HSPs)
chr4 (111-224)||(14449492-14449608)
chr4 (121-211)||(35615315-35615407)
chr4 (124-211)||(14060760-14060847)
chr4 (122-211)||(1420537-1420627)
chr4 (111-224)||(51362527-51362645)
chr4 (119-224)||(44356606-44356711)
chr4 (118-224)||(2016789-2016897)
chr4 (119-217)||(25909486-25909586)
chr4 (123-224)||(42526158-42526258)
chr4 (119-224)||(2836898-2837005)
chr4 (113-205)||(21957532-21957624)
chr4 (120-224)||(10059905-10060013)
chr4 (111-224)||(12719653-12719769)
chr4 (122-212)||(21871607-21871696)
chr4 (122-212)||(21927468-21927557)
chr4 (119-224)||(53312285-53312393)
chr4 (119-224)||(14060911-14061018)
chr4 (119-223)||(1420753-1420859)
chr4 (119-217)||(6207389-6207491)
chr4 (114-224)||(11824182-11824294)
chr4 (117-193)||(19909170-19909247)
chr4 (121-211)||(21957688-21957780)
chr4 (118-224)||(23759782-23759889)
chr4 (117-219)||(34773509-34773610)
chr4 (123-224)||(53924959-53925061)
chr4 (119-184)||(2017038-2017103)
chr4 (120-224)||(20112358-20112463)
chr4 (114-224)||(47999524-47999635)
chr4 (111-191)||(1571390-1571469)
chr4 (119-212)||(54855303-54855398)
chr4 (107-224)||(8965724-8965835)
chr4 (122-224)||(14016722-14016831)
chr4 (117-211)||(23759558-23759653)
chr4 (120-224)||(52462996-52463101)
chr4 (119-224)||(2654177-2654283)
chr4 (123-224)||(6637271-6637373)
chr4 (118-224)||(16292268-16292374)
chr4 (123-224)||(27978695-27978797)
chr4 (123-212)||(50769366-50769457)
chr4 (120-224)||(2181333-2181438)
chr4 (123-224)||(8965525-8965626)
chr4 (123-209)||(37831595-37831683)
chr4 (115-211)||(50769584-50769680)
chr4 (114-177)||(1186652-1186715)
chr4 (123-217)||(2180780-2180874)
chr4 (118-192)||(21451457-21451532)
chr4 (120-204)||(49185571-49185656)
chr4 (109-224)||(26089464-26089576)
chr4 (118-224)||(29697522-29697628)
chr4 (118-184)||(37832947-37833013)
chr4 (119-184)||(4796035-4796100)
chr4 (118-211)||(12719449-12719541)
chr4 (118-212)||(51371462-51371557)
chr4 (120-184)||(13826263-13826327)
chr4 (118-210)||(35383763-35383853)
chr4 (164-224)||(35392662-35392721)
chr4 (120-211)||(42525965-42526057)
chr4 (122-211)||(49185780-49185870)
chr4 (120-208)||(6207176-6207266)
chr4 (122-196)||(8070630-8070704)
chr4 (164-224)||(52865750-52865812)
chr4 (154-208)||(21451671-21451725)
chr4 (110-192)||(34567854-34567936)
chr4 (179-224)||(21322919-21322964)
chr4 (119-209)||(35393892-35393984)
chr4 (112-184)||(11983454-11983525)
chr4 (179-211)||(21322768-21322800)
chr4 (118-211)||(29697743-29697837)
chr4 (119-167)||(31553510-31553558)
chr4 (117-196)||(53312522-53312602)
[»] chr6 (33 HSPs)
chr6 (121-224)||(6036868-6036971)
chr6 (119-224)||(10727402-10727509)
chr6 (117-211)||(2203373-2203467)
chr6 (119-224)||(33399785-33399890)
chr6 (120-211)||(33401276-33401367)
chr6 (119-224)||(2853623-2853731)
chr6 (123-221)||(26601464-26601563)
chr6 (118-217)||(30349347-30349447)
chr6 (119-184)||(30349606-30349671)
chr6 (123-224)||(5003287-5003389)
chr6 (120-224)||(17248636-17248742)
chr6 (110-224)||(1377416-1377530)
chr6 (110-224)||(1385164-1385278)
chr6 (118-224)||(2841016-2841128)
chr6 (113-224)||(18031150-18031260)
chr6 (124-224)||(20474913-20475014)
chr6 (118-211)||(12766436-12766530)
chr6 (127-211)||(2853435-2853520)
chr6 (111-224)||(8223941-8224053)
chr6 (119-224)||(3812739-3812846)
chr6 (119-211)||(10727189-10727283)
chr6 (119-211)||(238929-239020)
chr6 (119-183)||(2203186-2203250)
chr6 (127-211)||(18030944-18031026)
chr6 (123-166)||(239213-239256)
chr6 (120-211)||(266122-266214)
chr6 (120-224)||(26311612-26311713)
chr6 (119-211)||(3579594-3579687)
chr6 (112-216)||(17248858-17248963)
chr6 (120-184)||(5003089-5003153)
chr6 (117-210)||(18604101-18604196)
chr6 (120-184)||(23584995-23585059)
chr6 (130-211)||(32143472-32143555)
[»] chr2 (51 HSPs)
chr2 (119-224)||(5470545-5470650)
chr2 (119-196)||(25375111-25375188)
chr2 (111-224)||(44617947-44618060)
chr2 (117-224)||(43028791-43028899)
chr2 (119-209)||(44297562-44297652)
chr2 (118-224)||(34679095-34679203)
chr2 (120-224)||(15022838-15022943)
chr2 (111-224)||(14489205-14489319)
chr2 (119-222)||(36715504-36715609)
chr2 (111-180)||(6592715-6592784)
chr2 (155-211)||(27489657-27489716)
chr2 (120-224)||(4576751-4576854)
chr2 (155-211)||(6592955-6593011)
chr2 (120-184)||(39918434-39918498)
chr2 (117-211)||(14943766-14943860)
chr2 (120-211)||(34679314-34679404)
chr2 (118-184)||(21358355-21358421)
chr2 (120-210)||(36176981-36177070)
chr2 (118-211)||(37431759-37431853)
chr2 (123-211)||(6510221-6510310)
chr2 (119-208)||(19206141-19206230)
chr2 (119-224)||(24472655-24472759)
chr2 (122-224)||(6510007-6510106)
chr2 (116-220)||(16043085-16043191)
chr2 (119-167)||(19399442-19399490)
chr2 (152-224)||(25092330-25092401)
chr2 (133-224)||(27489447-27489538)
chr2 (119-224)||(31827524-31827631)
chr2 (120-224)||(37803118-37803229)
chr2 (120-211)||(31827754-31827845)
chr2 (123-224)||(2609297-2609399)
chr2 (114-184)||(4576537-4576607)
chr2 (119-224)||(14489420-14489525)
chr2 (120-190)||(24498106-24498174)
chr2 (122-211)||(18709476-18709565)
chr2 (108-177)||(19889474-19889543)
chr2 (123-184)||(24306270-24306331)
chr2 (120-211)||(18709247-18709337)
chr2 (114-224)||(25333493-25333604)
chr2 (120-209)||(15023062-15023152)
chr2 (122-167)||(5362446-5362491)
chr2 (179-216)||(5470388-5470425)
chr2 (118-224)||(21361879-21361986)
chr2 (164-224)||(25411586-25411647)
chr2 (118-211)||(32013281-32013374)
chr2 (179-224)||(34760908-34760953)
chr2 (154-208)||(43029018-43029074)
chr2 (155-211)||(4925668-4925722)
chr2 (115-167)||(19399177-19399229)
chr2 (117-224)||(36177298-36177407)
chr2 (120-184)||(37803382-37803446)
[»] scaffold0062 (2 HSPs)
scaffold0062 (112-211)||(46068-46169)
scaffold0062 (120-224)||(46283-46392)
[»] scaffold0194 (1 HSPs)
scaffold0194 (119-212)||(25119-25209)
[»] scaffold0515 (1 HSPs)
scaffold0515 (106-184)||(3625-3703)
[»] scaffold0306 (1 HSPs)
scaffold0306 (106-184)||(3625-3703)
[»] scaffold0137 (1 HSPs)
scaffold0137 (121-224)||(19915-20019)
[»] scaffold0015 (2 HSPs)
scaffold0015 (119-184)||(77111-77176)
scaffold0015 (179-224)||(76923-76968)
[»] scaffold0011 (2 HSPs)
scaffold0011 (164-216)||(145571-145623)
scaffold0011 (131-224)||(145364-145459)
[»] scaffold1458 (1 HSPs)
scaffold1458 (106-184)||(1457-1535)
[»] scaffold0328 (1 HSPs)
scaffold0328 (123-224)||(9415-9517)
[»] scaffold0248 (1 HSPs)
scaffold0248 (123-224)||(405-509)
[»] scaffold0809 (1 HSPs)
scaffold0809 (110-224)||(2968-3081)
[»] scaffold0372 (2 HSPs)
scaffold0372 (118-192)||(122-197)
scaffold0372 (154-208)||(336-390)
[»] scaffold0166 (1 HSPs)
scaffold0166 (116-167)||(21654-21705)
[»] scaffold0150 (1 HSPs)
scaffold0150 (123-184)||(9786-9847)
[»] scaffold0025 (1 HSPs)
scaffold0025 (123-167)||(19608-19652)
[»] scaffold0001 (1 HSPs)
scaffold0001 (117-209)||(405065-405156)


Alignment Details
Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 3377497 - 3377607
Alignment:
Q  116 taaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatt 213  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||||| ||| ||||||  ||||||||||||||| || ||||||||||||||||    
T  3377497 taaaggcttaatagcagttttagccccctaacttttccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatt 3377596  T
Q  214 tgtgacagttt 224  Q
    |||| ||||||    
T  3377597 tgtggcagttt 3377607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 224
Target Start/End: Complemental strand, 49426291 - 49426200
Alignment:
Q  133 ttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    ||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  49426291 ttttagccccctaacttttccaaagttgcgattttagccctctaagaaaaaactacaaaactgttccttaagttttgcatttgtggcagttt 49426200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 14978797 - 14978889
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttag--cctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||| |  ||| | || |||||||||||||||||| ||||||||||||||    
T  14978797 ggcttaatagcagttttagccccctaacttttccaaagttgcgattttgggtccttc-aaaaaaaaactacaaaactgccccctaagttttgca 14978889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 17760679 - 17760790
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag----aaaaaactacaaaactgctccctaagttttgcat 212  Q
    |||||||||||||||| |||| |||||||||||  | |||||||||||||| ||| ||||||    |||||||||||||||  | |||||||||||||||    
T  17760679 aaaggcttaatagcagctttagccccctaacttcctcaaagttgcgattttggccccctaagaaaaaaaaaactacaaaaccaccccctaagttttgcat 17760778  T
Q  213 ttgtgacagttt 224  Q
     |||| ||||||    
T  17760779 atgtggcagttt 17760790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 18632319 - 18632421
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    |||||| |||||||||  ||| |||||||   ||||||||||||||  |  |||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  18632319 cttaattgcagttttagtcccttaactttcacaaagttgcgattttgactccctaagaaaaaactacaaaattgccctctaagttttgcatttgtgacag 18632418  T
Q  222 ttt 224  Q
    |||    
T  18632419 ttt 18632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 12960845 - 12960938
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcct-cctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||| |||||||| ||| |||||||||| |||||||||||||| |||| || || ||||||||||||||| ||  |||||||||||||    
T  12960845 aggcttaataacagttttagcccgctaactttttcaaagttgcgattttggcctcccaaaaaaaaaactacaaaaccgcctcctaagttttgca 12960938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 17692713 - 17692825
Alignment:
Q  106 aaatataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaag 204  Q
    |||||||||  | ||| ||||||||| ||||| |||||||||||| | ||||||| |||||||||| |||||| |||||| |||||||  || || ||||    
T  17692713 aaatataaataataggtttaatagcaattttaaccccctaactttctcaaagttgtgattttagccccctaagaaaaaaaatacaaaatcgccccttaag 17692812  T
Q  205 ttttgcatttgtg 217  Q
    |||||||||||||    
T  17692813 ttttgcatttgtg 17692825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 50226390 - 50226481
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttt 207  Q
    ||||||||||  |||||||| |||||||||||||| |||||||||||||| ||| ||||||||  || |||||||||| || ||||||||||    
T  50226390 aaggcttaattacagttttagccccctaactttttcaaagttgcgattttggccccctaagaaagaatactacaaaaccgccccctaagttt 50226481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 16874816 - 16874711
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttag-cctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtga 218  Q
    ||||||||||||||||| |||||||||||| | |||||||| ||||| | ||  ||||| ||||||||||||||| || || |||||||||||| ||||     
T  16874816 gcttaatagcagttttaaccccctaactttctcaaagttgcaattttggaccctctaagaaaaaaactacaaaaccgccccataagttttgcatctgtgg 16874717  T
Q  219 cagttt 224  Q
    ||||||    
T  16874716 cagttt 16874711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 50401393 - 50401477
Alignment:
Q  142 cctaacttttttaaagttgcgattttagcctcctaagaaaaa--actacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    ||||||||||| ||| |||||||||| | | ||||||||| |  |||||||||| || |||||||||||||||||||||||||||    
T  50401393 cctaactttttcaaaattgcgattttggtcccctaagaaatataactacaaaaccgccccctaagttttgcatttgtgacagttt 50401477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 3377825 - 3377733
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||| ||||||||||||   ||||||| |||||| ||| |||| | ||||||||||||||| |  ||||||||||||||    
T  3377825 ggcttaatagcagttttagccccctaactttcccaaagttgtgattttggccccctaggaaaaaaactacaaaaccgtcccctaagttttgca 3377733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 14979114 - 14979022
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaa-actacaaaactgctccctaagttttgca 211  Q
    |||||||||| ||||||  ||||||||||||  | ||||||| ||||| ||||||||||||||| |||||||||| || |||||| |||||||    
T  14979114 ggcttaatagaagttttcgccccctaactttcatgaagttgcaattttggcctcctaagaaaaatactacaaaaccgccccctaaattttgca 14979022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 30849546 - 30849438
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctccta-agaaaaaactacaaaactgctccctaagttttgcatttg 215  Q
    |||||||||||||||||||||  | ||||| |||||||||||||||||||| | ||   | | ||||||||||||||| |  ||||||||||||||| ||    
T  30849546 aaaggcttaatagcagttttagtctcctaatttttttaaagttgcgattttggactttaataaaaaaaactacaaaaccgtcccctaagttttgcatctg 30849447  T
Q  216 tgacagttt 224  Q
    ||| |||||    
T  30849446 tgatagttt 30849438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 32295267 - 32295161
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    |||||||||| ||||||| ||||  |||||||| ||||||||||||||  || ||||||||  |||| ||||||||  |  |||||||||| ||||||||    
T  32295267 ggcttaataggagttttagcccctaaactttttcaaagttgcgattttgaccccctaagaaaaaaaattacaaaaccaccacctaagttttacatttgtg 32295168  T
Q  218 acagttt 224  Q
    |||||||    
T  32295167 acagttt 32295161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 51250482 - 51250549
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttag-cctcctaagaaaaa 183  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||| | || |||||||||||    
T  51250482 aaaggcttaataacagttttagccccctaactttttcaaagttgcgattttggcccccctaagaaaaa 51250549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 8009732 - 8009834
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctccta-agaaaaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    ||||||||||||||| ||  | ||||||||  ||||||||||||| |||||  | | |||||| |||||||| |||||| ||||||||||| ||||||||    
T  8009732 ttaatagcagttttagccttcaaactttttcgaagttgcgattttggcctctaataaaaaaaattacaaaaccgctcccgaagttttgcatctgtgacag 8009831  T
Q  222 ttt 224  Q
    |||    
T  8009832 ttt 8009834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 12961155 - 12961053
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    ||||||||||||||| || ||||| ||||| |||||||||||||| |  ||||||||| |||||||||||| ||  |||||| |||||||  |||| |||    
T  12961155 ttaatagcagttttagcctcctaattttttcaaagttgcgattttggtttcctaagaaaaaaactacaaaattgtcccctaaattttgcaactgtggcag 12961056  T
Q  222 ttt 224  Q
    |||    
T  12961055 ttt 12961053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 45738935 - 45739029
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaa-gaaaaaactacaaaactgctccctaagttttgcat 212  Q
    ||||||||||||| ||||| | |||||||||| | ||||||| ||||||  || ||||| |||||||||||||||| || || ||||||||||||    
T  45738935 aggcttaatagcaattttaactccctaactttctcaaagttgtgattttgaccccctaaggaaaaaactacaaaaccgccccttaagttttgcat 45739029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 39642477 - 39642416
Alignment:
Q  164 ttttagcctcctaagaaaaaa-ctacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||| |||||||||||| ||||||||| || |||||||||||||||||||| ||||||    
T  39642477 ttttagccccctaagaaaaaaactacaaaaccgccccctaagttttgcatttgtggcagttt 39642416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 46573144 - 46573048
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||||   || |||||||||   ||||||||||||| | | ||||||||  |||||||||| ||||| ||||||||||||||    
T  46573144 aaaggcttaatagcagtttttgtcctctaacttttacgaagttgcgattttggtcccctaagaaaaaaaactacaacactgccccctaagttttgca 46573048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 5287887 - 5287795
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct-aagaaaaaactacaaaactgctccctaagttttgcat 212  Q
    ||||||||||||||||| |||| ||||||| | |||||||||||||| ||| ||| || |||||| |||||||  || |||||| ||||||||    
T  5287887 gcttaatagcagttttaaccccttaactttctcaaagttgcgattttggccccctaaaaaaaaaattacaaaatcgccccctaaattttgcat 5287795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 25085398 - 25085488
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagtttt 208  Q
    ||||||||||||||||||  ||||||||||||  ||||||||||||||| | | ||||||  ||||||||||||||| || | |||||||||    
T  25085398 aggcttaatagcagttttcgccccctaactttcataaagttgcgatttt-gacccctaagaaaaaaaactacaaaaccgccctctaagtttt 25085488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 7579661 - 7579763
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttag-cctcctaag--aaaaaactacaaaactgctccctaagttttgcattt 214  Q
    |||| ||||||||||||||| |||| |||||||   |||||||||||||| | || ||||||  ||||||||||||||| || | |||||||||||| ||    
T  7579661 aaggtttaatagcagttttaaccccttaactttccaaaagttgcgattttggcccccctaagaaaaaaaactacaaaaccgcccgctaagttttgcactt 7579760  T
Q  215 gtg 217  Q
    |||    
T  7579761 gtg 7579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 25085698 - 25085616
Alignment:
Q  126 atagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttg 209  Q
    |||||| ||||| |||||||||||||  ||||||| |||||| ||| ||||||||||||||||||| | || ||| ||||||||    
T  25085698 atagcaattttagccccctaacttttccaaagttgtgattttggcc-cctaagaaaaaactacaaatccgcaccccaagttttg 25085616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 43600452 - 43600402
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    ||||||||||||||||||||| | |||||||| |||||| |||||||||||    
T  43600452 aaaggcttaatagcagttttagcaccctaactattttaaggttgcgatttt 43600402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 1853705 - 1853665
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgcatttgtgaca 220  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  1853705 aaaaaactacaaaactgc-ccctaagttttgcatttgtgaca 1853665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 7579958 - 7579879
Alignment:
Q  138 cccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||| |||||||  ||||||||| ||||||||  ||||||||||||| || |||||| ||||||| ||||    
T  7579958 cccccctaactttttcaaagttgttattttagccgcctaagaaaaaaaactacaaaaccgc-ccctaaattttgcaattgt 7579879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 18632651 - 18632590
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaa 183  Q
    |||||||||||||||  |||||||||||||   ||||||||||||| ||||| |||||||||    
T  18632651 cttaatagcagttttcgccccctaacttttacgaagttgcgattttggcctcttaagaaaaa 18632590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 39642198 - 39642298
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaa--gaaaaaactacaaaactgctccctaagttttgcatttg 215  Q
    |||||||||||||||||||  ||||||||||||    ||||||||||||| |||  ||||   ||||||||||||||| || ||||||||| |||| |||    
T  39642198 aaggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggccctctaaataaaaaaactacaaaaccgccccctaagttctgcaattg 39642297  T
Q  216 t 216  Q
    |    
T  39642298 t 39642298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 44436818 - 44436863
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||    
T  44436818 aaaaaactacaaaactgtcccctaagttttgcacttgtgacagttt 44436863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 45739212 - 45739157
Alignment:
Q  155 aagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||| ||||||||| |||||| ||||||||||| || |||||||||||    
T  45739212 aagttgcgattttggcctcctaa-aaaaaattacaaaactgccccataagttttgca 45739157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 46572830 - 46572932
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgcatttgtgaca 220  Q
    ||||||||||||||| || ||||| |||   ||| |||| ||||| ||| ||||||||||  ||||||||||| |  |||||||||||||||||||| ||    
T  46572830 ttaatagcagttttagcctcctaattttcccaaaattgcaattttggcc-cctaagaaaaaaaactacaaaaccgtcccctaagttttgcatttgtggca 46572928  T
Q  221 gttt 224  Q
    ||||    
T  46572929 gttt 46572932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 27864472 - 27864370
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-----aaaaaactacaaaactgctccctaagttttgcatt 213  Q
    |||||||| |||||||||| | |||||||||||  |||||||| ||||| ||| ||||||     |||||||||| |||| || |||||||||||||||     
T  27864472 aggcttaacagcagttttagctccctaacttttccaaagttgcaattttggccccctaagaagaaaaaaaactaccaaaccgc-ccctaagttttgcatc 27864374  T
Q  214 tgtg 217  Q
    ||||    
T  27864373 tgtg 27864370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 3612504 - 3612409
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa----aaaactacaaaactgctccctaagttttg 209  Q
    ||||||||||||||||||||  ||||||| |||    |||||| |||||| | ||||||||||    ||||||||||||| || ||||||||||||    
T  3612504 aaggcttaatagcagttttagtcccctaagtttcaagaagttgagattttggtctcctaagaagaagaaaactacaaaaccgccccctaagttttg 3612409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 23891662 - 23891752
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa-aactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||  | ||||||||||    |||||| |||||| ||| |||||||||| ||||||||||| || || |||||||||||    
T  23891662 cttaatagcagttttcgctccctaactttcacgaagttgtgattttggccccctaagaaaaaaactacaaaaccgccccttaagttttgca 23891752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 7764013 - 7764070
Alignment:
Q  110 ataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    |||||||||||||||||| ||| ||||  ||| ||| |||||| ||||||||||||||    
T  7764013 ataaaataaaggcttaatggcactttttgccctctatctttttaaaagttgcgatttt 7764070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 44672326 - 44672418
Alignment:
Q  131 agttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    ||||||| || ||||||||| | ||||||| ||||||  || ||||| |||||  |||||||| || ||||||||||||||| |||| ||||||    
T  44672326 agttttagcctcctaactttctcaaagttgtgattttgaccccctaacaaaaat-tacaaaaccgccccctaagttttgcatatgtggcagttt 44672418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 1096469 - 1096573
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct-aagaaaaaact-acaaaactgctccctaagttttgcatttgtgac 219  Q
    ||||||| |||||||| |||| ||||||||  |||||||||||||| | | ||| || |||||||| ||||||| || | |||||||| |||| |||| |    
T  1096469 cttaataacagttttagccccttaacttttccaaagttgcgattttggtcccctaaaaaaaaaactaacaaaaccgccctctaagtttcgcatctgtggc 1096568  T
Q  220 agttt 224  Q
    |||||    
T  1096569 agttt 1096573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 6320562 - 6320618
Alignment:
Q  124 taatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa 180  Q
    |||| ||||||||| ||| ||||||||| ||||||||||||||| ||| | ||||||    
T  6320562 taattgcagttttagccctctaacttttctaaagttgcgattttggccccttaagaa 6320618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 6320891 - 6320828
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaacta 187  Q
    |||||| ||||||| | ||||||||||||   ||||||||||||| ||| |||||||||||||||    
T  6320891 ttaataccagtttt-cgcccctaacttttaagaagttgcgattttggccccctaagaaaaaacta 6320828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 15107304 - 15107200
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtga 218  Q
    |||||||||||||||||||||||||||| ||||  |||||| ||||||| ||| ||||| ||||||||||||||| |||||||||||||||||||||||     
T  15107304 aggcttaatagcagttttacccccctaatttttccaaagttacgattttggccccctaa-aaaaaactacaaaaccgctccctaagttttgcatttgtgg 15107206  T
Q  219 cagttt 224  Q
    ||||||    
T  15107205 cagttt 15107200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 41243643 - 41243748
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||||||||||| |||||||||||||  |||||||| ||||||||| |||||| ||||||||||||||| || ||||||||||||||||||||    
T  41243643 aggcttaatagcagttttagccccctaacttttccaaagttgcaattttagccccctaagaaaaaaactacaaaaccgc-ccctaagttttgcatttgtg 41243741  T
Q  218 acagttt 224  Q
     ||||||    
T  41243742 gcagttt 41243748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 23745897 - 23745996
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    ||||||||||||||| | ||||||||||||||| ||| ||||||| ||||| |||| ||||||||||||||| || ||| ||||||||||||||||||||    
T  23745897 ttaatagcagttttaactccctaacttttttaatgttacgattttggcctcttaagaaaaaaactacaaaac-gcccccaaagttttgcatttgtgacag 23745995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 36903581 - 36903492
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||| ||  ||| | |||||||||||||||||| ||||||||||||||    
T  36903581 ggcttaatagcagttttaaccccctaactttttcaatgttgcgattttggc--ccttaaaaaaaactacaaaactgcaccctaagttttgca 36903492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 47909696 - 47909792
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    |||||||||||||||| ||||||||||||   |||||||||||||||||| |||||| ||||||||||||||  || ||||||||||||||| ||||    
T  47909696 cttaatagcagttttagccccctaactttcccaaagttgcgattttagccccctaagaaaaaaactacaaaatcgccccctaagttttgcatctgtg 47909792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 42256581 - 42256690
Alignment:
Q  119 aggcttaatagcagtttta-cccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagttttgcattt 214  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||   ||||||| | ||||| || ||||||||||||||  |    
T  42256581 aggcttaatagcagttttaacccccctaactttttcaaagttgcgattttagccccctaagaaaaaaaaacaataaaaccgccccctaagttttgcacat 42256680  T
Q  215 gtgacagttt 224  Q
    ||| ||||||    
T  42256681 gtggcagttt 42256690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 6792107 - 6792017
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||| |||||||||||||  |||||||||||||| | | ||||||||  ||||||||||||| || ||||||||||||||    
T  6792107 ttaatagcagttttagccccctaacttttccaaagttgcgattttggtcccctaagaaaaaaaactacaaaaccgccccctaagttttgca 6792017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 14247284 - 14247399
Alignment:
Q  110 ataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagtttt 208  Q
    |||||||||||||||||||||||||||  || |||||||||    |||||| |||||| ||| |||||| ||||||||||||||| || || ||||||||    
T  14247284 ataaaataaaggcttaatagcagttttcgccacctaactttcacgaagttgtgattttggccgcctaagaaaaaaactacaaaaccgccccataagtttt 14247383  T
Q  209 gcatttgtgacagttt 224  Q
    ||| ||||| ||||||    
T  14247384 gcaattgtggcagttt 14247399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 15347952 - 15348049
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||||| |||||| ||||||||||||  ||||||||||||||| | | |||||||||||||||||||||  | ||||||||||||||| ||||    
T  15347952 aaggcttaatagccgttttagccccctaactttcctaaagttgcgatttt-gacccctaagaaaaaactacaaaaccac-ccctaagttttgcatctgtg 15348049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 20505323 - 20505232
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||  ||||||| ||||| | ||||||||||||| ||| ||||| ||||||||||||||| || ||||||||| ||||    
T  20505323 ggcttaatagcagttttcaccccctagcttttatgaagttgcgattttggccccctaaaaaaaaactacaaaaccgccccctaagttgtgca 20505232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 21505927 - 21505837
Alignment:
Q  124 taatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcat 212  Q
    ||||||||||||||  ||||||||||||| |||||||||||||| ||| ||||||||  |||||||||||||||| ||||| | |||||||    
T  21505927 taatagcagttttagtcccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaactgccccctatgctttgcat 21505837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 20184915 - 20185023
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagttttgcatttg 215  Q
    |||||||||| |||||||| | |||||||||||  |||||||||||||||||| ||||||   ||||||||||||||| ||  | |||||||||||| ||    
T  20184915 aggcttaataacagttttagctccctaacttttccaaagttgcgattttagccccctaagaaaaaaaaactacaaaaccgcctcttaagttttgcatatg 20185014  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  20185015 tgccagttt 20185023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 5172513 - 5172617
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgtgac 219  Q
    ||||||| ||||||||  || |||||||||||||||||| |||||| ||||||||||  ||||||||| |||| ||| | ||||||||||||| |||| |    
T  5172513 cttaataacagttttagtcctctaacttttttaaagttgtgattttggcctcctaagaaaaaaaactataaaattgccctctaagttttgcatctgtggc 5172612  T
Q  220 agttt 224  Q
    |||||    
T  5172613 agttt 5172617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 18504246 - 18504349
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcc-taagaaaaaa--ctacaaaactgctccctaagttttgcatttgtgac 219  Q
    ||||||||||||||| |||| ||||||||||||||||| |||||| ||| || ||||||||||  ||||||||| || ||||||||||||||| |||| |    
T  18504246 ttaatagcagttttaacccc-taacttttttaaagttgtgattttggcccccctaagaaaaaatactacaaaaccgccccctaagttttgcatatgtggc 18504344  T
Q  220 agttt 224  Q
    |||||    
T  18504345 agttt 18504349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 28350112 - 28350208
Alignment:
Q  116 taaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgc 210  Q
    |||||||||||||||||||||| ||||||||||||    ||||| ||||||| ||| ||||||  ||||||||||||||| || |||||||||||||    
T  28350112 taaaggcttaatagcagttttagccccctaactttcacgaagttacgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgc 28350208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 36580595 - 36580483
Alignment:
Q  113 aaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgatttt-agcctcctaagaaaaaa-ctacaaaactgctccctaagttttgc 210  Q
    ||||||||| ||||||| ||||||| |||  ||||||||| |||||||||||||| | ||| | ||||||||| ||||||||| || |||||||||||||    
T  36580595 aaataaaggtttaatagtagttttaaccctttaactttttcaaagttgcgattttgatccttc-aagaaaaaagctacaaaaccgccccctaagttttgc 36580497  T
Q  211 atttgtgacagttt 224  Q
    ||||||| ||||||    
T  36580496 atttgtggcagttt 36580483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 3381885 - 3381968
Alignment:
Q  142 cctaacttttttaaagttgcgattttagcctcctaagaaaa-aactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||||| ||||||||||||||||| | | |||||||| ||||||||||| || ||||||||||||||| |||| ||||||    
T  3381885 cctaacttttctaaagttgcgattttagtcccataagaaaaaaactacaaaaccgccccctaagttttgcatatgtggcagttt 3381968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 20185240 - 20185138
Alignment:
Q  109 tataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagtttt 208  Q
    ||||||||||||| ||||||| ||||||  ||||||||||||    |||||||||||||  || ||||| ||||||||||||||| ||  ||||||||||    
T  20185240 tataaaataaaggattaatagtagttttcgccccctaactttcacgaagttgcgattttgaccccctaaaaaaaaactacaaaaccgcctcctaagtttt 20185141  T
Q  209 gca 211  Q
    |||    
T  20185140 gca 20185138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 28472382 - 28472461
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaa 192  Q
    |||| ||| ||||||||||||||||| |||| ||||||||  ||||||||||||||  || ||||||||||||||||||||    
T  28472382 aaaaaaaaagcttaatagcagttttagcccc-taacttttccaaagttgcgattttgaccccctaagaaaaaactacaaaa 28472461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 36903261 - 36903368
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-----aaaaaactacaaaactgctccctaagttttgcatttg 215  Q
    ||||||||| ||||||| | |||| ||||||  |||||||||||||||||||||||||     ||||||||||||||| || ||||||||||| ||| ||    
T  36903261 gcttaatagtagttttagctcccttacttttccaaagttgcgattttagcctcctaagataaaaaaaaactacaaaaccgc-ccctaagttttccatctg 36903359  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  36903360 tggcagttt 36903368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 4050046 - 4049943
Alignment:
Q  109 tataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttt 207  Q
    |||||| |||||||||||||||||||||  |||| |||||||    |||||| |||||| ||| |||||| ||||||||||||||| || ||||||| ||    
T  4050046 tataaattaaaggcttaatagcagttttcgccccttaactttcacgaagttgtgattttggccccctaagaaaaaaactacaaaaccgccccctaaggtt 4049947  T
Q  208 tgca 211  Q
    ||||    
T  4049946 tgca 4049943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 28786072 - 28785963
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-----aaaactacaaaactgctccctaagttttgcatt 213  Q
    ||||||||||||||||||| |||| ||||||||  ||||||| |||||| ||| | ||||||     |||||||||||||||| || |||||||||||||    
T  28786072 aggcttaatagcagttttaaccccataacttttccaaagttgtgattttggcc-cttaagaagaaaaaaaactacaaaactgccccataagttttgcatt 28785974  T
Q  214 tgtgacagttt 224  Q
    | || ||||||    
T  28785973 tatggcagttt 28785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 35250118 - 35250224
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||| ||||||| ||| |||||||||  |||||||||||||| | | | |||| ||||||||| ||||| || | ||||||||||||| | ||    
T  35250118 aggcttaatagtagttttagccctctaacttttccaaagttgcgattttggtcccttaagaaaaaaactataaaaccgccctctaagttttgcatctttg 35250217  T
Q  218 acagttt 224  Q
    |||||||    
T  35250218 acagttt 35250224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 3318317 - 3318418
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtga 218  Q
    ||||||||||| ||||||| |||| ||||||||  |||||||||||||| | | ||||| |||||| |||||||| |  || |||||||||||  |||||    
T  3318317 aggcttaataggagttttagccccttaacttttccaaagttgcgattttggtcccctaaaaaaaaattacaaaaccgtcccttaagttttgcacctgtga 3318416  T
Q  219 ca 220  Q
    ||    
T  3318417 ca 3318418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 4049709 - 4049815
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag----aaaaaactacaaaactgctccctaagt-tttgcatttgtg 217  Q
    |||| |||||||||| ||| ||||||||| ||||||||||||||| ||| | ||||    ||||||||||||||| | ||||||||| ||||||| ||||    
T  4049709 ttaacagcagttttagcccactaacttttctaaagttgcgattttggccccttaagaaaaaaaaaactacaaaaccgttccctaagtctttgcatctgtg 4049808  T
Q  218 acagttt 224  Q
     ||||||    
T  4049809 gcagttt 4049815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 15029058 - 15029167
Alignment:
Q  120 ggcttaatagcagttttaccc---ccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgcattt 214  Q
    |||||||||||||||||| ||   |||||||||||  ||||||||||||||  || ||||| ||||  ||||||||||| || ||||||||||||||  |    
T  15029058 ggcttaatagcagttttaaccaacccctaacttttccaaagttgcgattttgaccccctaataaaaaaaactacaaaaccgccccctaagttttgcacat 15029157  T
Q  215 gtgacagttt 224  Q
    ||| ||||||    
T  15029158 gtggcagttt 15029167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 18186763 - 18186659
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa---aaaactacaaaactgctccctaagttttgcatttgtgac 219  Q
    ||||||||||||||| |||||||||||||  |||||| |||||||  || ||||||||   ||||||| ||||| |  || |||||||||||| |||| |    
T  18186763 ttaatagcagttttagccccctaacttttccaaagttacgattttgaccccctaagaaaaaaaaactataaaaccgtcccttaagttttgcatctgtggc 18186664  T
Q  220 agttt 224  Q
    |||||    
T  18186663 agttt 18186659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 44312995 - 44312950
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||    
T  44312995 aaaaaattacaaaactgcctcctaagttttgcatttgtgacagttt 44312950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 9477125 - 9477184
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcc 171  Q
    |||||||||| ||||||||||||||  |||||||  ||||  ||||||||||||||||||    
T  9477125 aaaataaaggtttaatagcagttttggccccctatgttttaaaaagttgcgattttagcc 9477184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 9500213 - 9500124
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa---ctacaaaactgctccctaagttttg 209  Q
    ||||||||||||||| |||||||| |||    ||||||||||||| | | ||||||||||||   ||||||||| || ||||||||||||    
T  9500213 ttaatagcagttttagccccctaagtttcaagaagttgcgattttggtcccctaagaaaaaaaaactacaaaaccgccccctaagttttg 9500124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 11742704 - 11742763
Alignment:
Q  114 aataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctc 173  Q
    ||||||| |||||| ||| ||||  ||||||| |||||| ||||||||||||||||||||    
T  11742704 aataaagacttaattgcacttttggccccctatctttttaaaagttgcgattttagcctc 11742763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 13889723 - 13889672
Alignment:
Q  173 cctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||||||| || ||||| ||||| ||||||||||||||||| ||||||    
T  13889723 cctaagaaaaaattataaaaccgctccttaagttttgcatttgtggcagttt 13889672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 18186458 - 18186532
Alignment:
Q  139 ccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||| | ||||||||||||| ||||  ||||  ||||||||||||||| ||  |||||||||||||    
T  18186458 ccccctaacttttatgaagttgcgattttggccttttaagaaaaaaaactacaaaaccgcctcctaagttttgca 18186532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 20505101 - 20505156
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag 178  Q
    ||||||||||||||| |||||||||||| | |||||||||| ||| ||| ||||||    
T  20505101 ttaatagcagttttagccccctaactttctcaaagttgcgactttggccccctaag 20505156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 33159482 - 33159541
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaa 177  Q
    |||||||||| ||| ||||| ||||||| |||||| |||||||||||||| ||| |||||    
T  33159482 aaggcttaattgcacttttaaccccctatctttttaaaagttgcgattttggccccctaa 33159541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 35250411 - 35250341
Alignment:
Q  140 cccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||   ||||||||||||||  || ||||| |||||||| ||||||||| ||||||||||||||    
T  35250411 cccctaactttgacaaagttgcgattttgaccccctaa-aaaaaactgcaaaactgccccctaagttttgca 35250341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 46265868 - 46265955
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttg 209  Q
    ||||||||||||||| |||| ||| ||||   |||||| |||||| ||| |||||| ||||||||||||||| ||  |||||||||||    
T  46265868 ttaatagcagttttaaccccttaagttttaagaagttgggattttggccccctaagaaaaaaactacaaaaccgcctcctaagttttg 46265955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 17932041 - 17931938
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtga 218  Q
    ||||||||||||||||||| || ||| ||||||  |||||||||||||| |||  |||  |||||| |||||||  || | |||| |||||||| ||||     
T  17932041 aggcttaatagcagttttagcctcctcacttttccaaagttgcgattttggccctcta--aaaaaaatacaaaatcgccctctaaattttgcatctgtgt 17931944  T
Q  219 cagttt 224  Q
    ||||||    
T  17931943 cagttt 17931938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 48059260 - 48059168
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa--ctacaaaactgctccctaagttttgc 210  Q
    ||||||||||||||||||  ||||||| ||||   |||||| |||||| ||  || |||||||||  ||||||||| || |||||||||||||    
T  48059260 ggcttaatagcagttttaggcccctaagttttaagaagttgtgattttggcaccccaagaaaaaaaactacaaaaccgccccctaagttttgc 48059168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 8662891 - 8662836
Alignment:
Q  158 ttgcgattttagcctcctaaga--aaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||| |||||||||||  |||||||||||||| || || |||||||||||    
T  8662891 ttgcgattttggcctcctaagataaaaaactacaaaacagccccataagttttgca 8662836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 11374222 - 11374182
Alignment:
Q  177 agaaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    |||||| ||||||||||| | ||||||||||||||||||||    
T  11374222 agaaaagactacaaaactaccccctaagttttgcatttgtg 11374182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 17876475 - 17876407
Alignment:
Q  116 taaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    |||||||||||||||||||||  ||||||||||||    ||||| ||||||| ||| | ||||||||||    
T  17876475 taaaggcttaatagcagttttcaccccctaactttcacgaagttacgattttggccccttaagaaaaaa 17876407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 18504557 - 18504457
Alignment:
Q  116 taaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttg 215  Q
    ||||||||||||| |||||||   |||||||||||  | |||||||||||||   | ||||| ||||||||| ||||| |  || ||||||||||| |||    
T  18504557 taaaggcttaataacagttttcgtcccctaactttcatgaagttgcgattttgatcccctaaaaaaaaactaaaaaaccgtcccttaagttttgcaattg 18504458  T
Q  216 t 216  Q
    |    
T  18504457 t 18504457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 36580274 - 36580366
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa-aactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||   |||||||||||    |||||| |||||| | | |||||||||| ||||||||||| |  ||||||||||||||    
T  36580274 ggcttaatagcagttttcggcccctaactttcacgaagttgtgattttggtcccctaagaaaaaaactacaaaaccgtcccctaagttttgca 36580366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 45717889 - 45718004
Alignment:
Q  109 tataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttt 207  Q
    |||||| |||||| || |||||||||||| || ||||| ||||  ||||||| |||||| ||  | |||| |||||||||||||| |  || ||||||||    
T  45717889 tataaattaaaggattgatagcagttttagcctcctaatttttccaaagttgtgattttggctccttaagaaaaaaactacaaaa-tcatctctaagttt 45717987  T
Q  208 tgcatttgtgacagttt 224  Q
    ||||| |||| ||||||    
T  45717988 tgcatctgtgtcagttt 45718004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 48058844 - 48058967
Alignment:
Q  103 ttaaaatataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccc 200  Q
    |||||| | |||| ||||| ||||||||||||||| |||||||| |||    |||||| |||||| ||| | ||||  ||||||||||||||  |  |||    
T  48058844 ttaaaaaaaaaaaaaaaggattaatagcagttttaaccccctaagtttcaacaagttgagattttggccccttaagaaaaaaaactacaaaatcgtcccc 48058943  T
Q  201 taagttttgcatttgtgacagttt 224  Q
    |||||||||| | |||| ||||||    
T  48058944 taagttttgcctctgtggcagttt 48058967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 54719309 - 54719217
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcat 212  Q
    |||||||| ||||||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  54719309 ggcttaatggcagttttaaccccctaacttattcaaagttgcgattttggcctcctaagaaaaaactacaaaaccgccccctaagttttgcat 54719217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 38957836 - 38957952
Alignment:
Q  111 taaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagttt 207  Q
    ||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||| |||   ||||   ||||||||||||||| || ||||||||||    
T  38957836 taaaaaaaaggcttaatagcagttttagcctcctaatttttttaaagttgcgattttggccctttaagaaaaaaaaactacaaaaccgccccctaagttt 38957935  T
Q  208 tgcatttgtgacagttt 224  Q
    |||||||||| ||||||    
T  38957936 tgcatttgtggcagttt 38957952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 43586872 - 43586770
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgaca 220  Q
    ||||||||| ||||||| || || |||||||| |||||||||||||| ||||||||||||||||||||||||  |   |||| |||||||||||||||||    
T  43586872 gcttaatagtagttttagcctcccaactttttcaaagttgcgattttggcctcctaagaaaaaactacaaaatcgtctcctatgttttgcatttgtgaca 43586773  T
Q  221 gtt 223  Q
    |||    
T  43586772 gtt 43586770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 86578 - 86671
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||| ||||| |||||||||||||| |||||||| ||||| | || |||||||||||||| |||||||| |||||||||||||| ||||    
T  86578 ttaatagcaattttagccccctaactttttaaaagttgctattttggtctactaagaaaaaactataaaactgcgccctaagttttgcacttgt 86671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 51315799 - 51315692
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||| ||| ||||||||  ||||||||||||| || ||||||||||||||  |||    
T  51315799 aggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcacctgt 51315700  T
Q  217 gacagttt 224  Q
    | ||||||    
T  51315699 ggcagttt 51315692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 25902669 - 25902561
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttg 215  Q
    ||||||||||| |||||||| |||||||||||| | |||||||||||||| ||  ||||||||  ||||||||||||| ||  | |||||||||||||||    
T  25902669 aaggcttaatatcagttttagccccctaactttctcaaagttgcgattttggctccctaagaaaaaaaactacaaaaccgcctcataagttttgcatttg 25902570  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  25902569 tggcagttt 25902561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 44586097 - 44585994
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttgtgaca 220  Q
    ||||||||||||||| ||||||||||||   |||||||||||||| ||| ||||||||  ||||||||||||| || ||||||||||||| | |||| ||    
T  44586097 ttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcttctgtggca 44585998  T
Q  221 gttt 224  Q
    ||||    
T  44585997 gttt 44585994  T

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Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 44433381 - 44433272
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcct-cctaag---aaaaaactacaaaactgctccctaagttttgcattt 214  Q
    ||||||||||||||||||| |||||||||||||  | |||||||||||  |||| ||||||   ||||||||||||||| || ||||||||||||||| |    
T  44433381 aggcttaatagcagttttagccccctaacttttccacagttgcgatttcggcctccctaagaaaaaaaaactacaaaaccgccccctaagttttgcatat 44433282  T
Q  215 gtgacagttt 224  Q
    ||| ||||||    
T  44433281 gtggcagttt 44433272  T

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Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 28712777 - 28712683
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||||  ||||||||||||| | |||||| |||||| ||| |||||||| ||||||||||||  || ||||||||||||||    
T  28712777 aaggcttaatagcagttttcgccccctaacttttatgaagttgtgattttggccccctaagaaaaaaactacaaaatcgccccctaagttttgca 28712683  T

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Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 25154183 - 25154279
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||||||| || ||||||||||||||| |||| ||||||||| ||||||  |||||||||||||||| | |  |||||||||||| ||||    
T  25154183 ttaatagcagttttaacctcctaacttttttaaaattgcaattttagccccctaagaaaaaaaactacaaaactaccctataagttttgcatctgtg 25154279  T

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Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 25248692 - 25248789
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||||| | | ||| |||||  |||||||| || | ||||||||||||| ||||    
T  25248692 ggcttaatagcagttttaaccctttaacttttttaaagttgcgattttagtcccttaaaaaaaatatacaaaaccgccctctaagttttgcatctgtg 25248789  T

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Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 50802647 - 50802764
Alignment:
Q  108 atataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagtt 206  Q
    ||||| |||| | ||||||||||||||||| || | ||||||||  ||||||| |||||| ||| |||||| |||||||||||||||| | |||||||||    
T  50802647 atatataatataagcttaatagcagttttaacctcttaacttttccaaagttgtgattttggccccctaagaaaaaaactacaaaactaccccctaagtt 50802746  T
Q  207 ttgcatttgtgacagttt 224  Q
    |||||  |||| ||||||    
T  50802747 ttgcacatgtggcagttt 50802764  T

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Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 50873230 - 50873113
Alignment:
Q  108 atataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagtt 206  Q
    ||||| |||| | ||||||||||||||||| || | ||||||||  ||||||| |||||| ||| |||||||| |||||||||||||| | |||||||||    
T  50873230 atatataatataagcttaatagcagttttaacctcttaacttttccaaagttgtgattttggccccctaagaaaaaaactacaaaactaccccctaagtt 50873131  T
Q  207 ttgcatttgtgacagttt 224  Q
    |||||  |||| ||||||    
T  50873130 ttgcacatgtggcagttt 50873113  T

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Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 15979005 - 15978913
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||| ||||||| |||| |||||||| |||| |||||||||| |||   ||| ||||||||||||||| || ||||||||||||||    
T  15979005 aggcttaatagtagttttagccccgtaacttttctaaaattgcgattttggccctataaaaaaaaactacaaaaccgccccctaagttttgca 15978913  T

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Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 25154496 - 25154402
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||| ||||||||||||   ||||||| ||||||  |||||||||||  ||||||||||||| || || |||||||||||    
T  25154496 aggcttaatagcagttttaaccccctaactttaccaaagttgtgattttgacctcctaagaaaaaaaactacaaaaccgccccttaagttttgca 25154402  T

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Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 14349423 - 14349320
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtga 218  Q
    ||||||||||||||||||  |||||||||||||   |||||||||||||| || ||||  ||||||||||||||||||  | |||||||||||  ||| |    
T  14349423 aggcttaatagcagttttcgccccctaacttttacgaagttgcgattttaacccccta--aaaaaactacaaaactgcctcttaagttttgcaactgtaa 14349326  T
Q  219 cagttt 224  Q
    ||||||    
T  14349325 cagttt 14349320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 17773163 - 17773275
Alignment:
Q  113 aaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgc 210  Q
    ||||||||||||||||||||||||  ||||||||||||    ||||||||||||| ||  ||||||  ||||||||||||||| || |||||||||||||    
T  17773163 aaataaaggcttaatagcagttttcgccccctaactttcactaagttgcgattttggcaccctaaggaaaaaaactacaaaaccgc-ccctaagttttgc 17773261  T
Q  211 atttgtgacagttt 224  Q
    |  |||| ||||||    
T  17773262 aactgtggcagttt 17773275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 19074464 - 19074576
Alignment:
Q  113 aaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgc 210  Q
    ||||||||||||||||||||||||  ||||||||||||    ||||||||||||| ||  ||||||  ||||||||||||||| || |||||||||||||    
T  19074464 aaataaaggcttaatagcagttttcgccccctaactttcactaagttgcgattttggcaccctaaggaaaaaaactacaaaaccgc-ccctaagttttgc 19074562  T
Q  211 atttgtgacagttt 224  Q
    |  |||| ||||||    
T  19074563 aactgtggcagttt 19074576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 19404399 - 19404489
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||| |||||||   |||||||||||    |||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||    
T  19404399 gcttaataacagttttcgtcccctaactttcacgaagttgcgattttagccctctaagaaaaaactacaaaactgccccctaaattttgca 19404489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 54464163 - 54464268
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgcatttgtga 218  Q
    |||||||||||||||||  |||||||||||| ||||||| |||||||   | | ||||||||  |||||||||||||  ||||||||||||||| ||||     
T  54464163 gcttaatagcagttttagtcccctaacttttctaaagttacgattttgatcccttaagaaaaagaactacaaaactgtcccctaagttttgcatatgtgg 54464262  T
Q  219 cagttt 224  Q
    ||||||    
T  54464263 cagttt 54464268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 3916429 - 3916535
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgcatttg 215  Q
    |||||||||||||||||||| |||| ||| |||||| |||||| |||||| ||| ||||||||||  ||||||||||  |||| ||||||||||||| ||    
T  3916429 aaggcttaatagcagttttaacccc-taaatttttttaagttgtgattttggcc-cctaagaaaaaaaactacaaaatcgctcactaagttttgcatctg 3916526  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  3916527 tggcagttt 3916535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 1814866 - 1814774
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgcat 212  Q
    ||||||||||||||||| || ||||||||||  |||||| ||||||| | | |||||||| ||||||||||||| |  |||||||||||||||    
T  1814866 gcttaatagcagttttagcctcctaacttttccaaagtttcgattttggacccctaagaaaaaaactacaaaaccgtcccctaagttttgcat 1814774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 8025093 - 8024997
Alignment:
Q  122 cttaatagc-agttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||| ||||||| | |||||||||||| |||||||||| ||||||| | |||||||||| |||||||  |  ||||||||||||||| ||||    
T  8025093 cttaatagccagttttaactccctaactttttcaaagttgcgactttagccccataagaaaaaaatacaaaatcgtcccctaagttttgcatatgtg 8024997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 20432497 - 20432409
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagtttt 208  Q
    |||||||||||| ||||| |||||||||||||  ||||||| |||||| | | ||||||||||||||||||||   | |||||||||||    
T  20432497 ggcttaatagcatttttaaccccctaacttttcaaaagttgtgattttggtcccctaagaaaaaactacaaaatcaccccctaagtttt 20432409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 48348569 - 48348466
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgcatttgtgaca 220  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||| | |   ||||||||  ||||||||||  || || |||||||||||| |||| ||    
T  48348569 ttaatagtagttttatccccctaacttttttaaagttgcgattttggtcctttaagaaaaataactacaaaatcgccccttaagttttgcatatgtggca 48348470  T
Q  221 gttt 224  Q
    ||||    
T  48348469 gttt 48348466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 28944289 - 28944187
Alignment:
Q  110 ataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagtttt 208  Q
    |||||||  ||||||||||||||||||   ||||||||||||   ||||||||||||| ||||| |||| ||||||||||||||| |  || ||||||||    
T  28944289 ataaaatttaggcttaatagcagtttttgtcccctaacttttactaagttgcgattttggcctcataagaaaaaaactacaaaaccgtcccttaagtttt 28944190  T
Q  209 gca 211  Q
    |||    
T  28944189 gca 28944187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 47189599 - 47189689
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||| |||||||  | ||||||||||| | ||||||||||||| ||| ||||| ||||||||| ||||| || || |||||||||||    
T  47189599 gcttaataacagttttcgctccctaacttttatgaagttgcgattttggccccctaaaaaaaaactataaaaccgccccttaagttttgca 47189689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 38958158 - 38958066
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgatttt-agcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||  ||||||||||||    || || ||||||| |||| ||||||||||||||||||||| || ||||||||||||||    
T  38958158 aggcttaatagcagttttcgccccctaactttcacgaaattacgattttgagcc-cctaagaaaaaactacaaaaccgccccctaagttttgca 38958066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 22494555 - 22494651
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    |||||||||| ||||| |||||||| ||||  |||||| |||||||  || |||||| ||||||||||||||| || | |||| |||||||||||||    
T  22494555 cttaatagcaattttaaccccctaaattttccaaagttacgattttgaccccctaagaaaaaaactacaaaaccgccctctaaattttgcatttgtg 22494651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 36677841 - 36677770
Alignment:
Q  109 tataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa 180  Q
    ||||||||| ||| ||||||||||||||||||||  || ||||  |||||||||||||||| | ||||||||    
T  36677841 tataaaatataggtttaatagcagttttaccccctaaatttttccaaagttgcgattttagtcccctaagaa 36677770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 3193096 - 3192990
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||||||||||  ||||||||||||    |||||||||||||  || |||||| |||||||| |||||| |  ||||||||||||||  |||     
T  3193096 aggcttaatagcagttttcaccccctaactttcaagaagttgcgattttgaccccctaagaaaaaaacttcaaaaccgacccctaagttttgcaactgta 3192997  T
Q  218 acagttt 224  Q
    |||||||    
T  3192996 acagttt 3192990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 14341047 - 14340942
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgatttt-agcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||| |||||||||  | ||||||||| |||||||||||||| | | ||  || ||||||||||||||  |  ||||||||||||||||||||    
T  14341047 aggcttaatagtagttttaccttc-taactttttcaaagttgcgattttgaccatctaaaaaaaaaactacaaaatagtcccctaagttttgcatttgtg 14340949  T
Q  218 acagttt 224  Q
     ||||||    
T  14340948 gcagttt 14340942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 7218466 - 7218409
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa 180  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||| ||  ||||||||    
T  7218466 ttaatagcaattttagccccctaatttttttaaagttgcgattttggctccctaagaa 7218409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 15976242 - 15976343
Alignment:
Q  124 taatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa-ctacaaaactgctccctaagttttgcatttgtgacagt 222  Q
    ||||| |||||||| | |||||| |||||||||||||  ||||| | |  ||||||||||| ||| |||||||  |||||||||||||| ||||| ||||    
T  15976242 taatatcagttttagctccctaatttttttaaagttgtaattttggacatctaagaaaaaaactataaaactgtcccctaagttttgcacttgtggcagt 15976341  T
Q  223 tt 224  Q
    ||    
T  15976342 tt 15976343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 20432182 - 20432274
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctcccta 202  Q
    ||||| |||||||||||||||||||  |||||||||||||   ||||||||| ||| | | ||||||  |||||||||||||| ||| |||||    
T  20432182 aaaattaaggcttaatagcagtttttgccccctaacttttacgaagttgcgactttggtcccctaagaaaaaaaactacaaaaatgcccccta 20432274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 27178141 - 27178232
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||   ||||||||||||   ||||||||| ||| ||| ||||||||||  ||||||||||| || ||||||||||||||    
T  27178141 gcttaatagcagttttcgtcccctaacttttacgaagttgcga-tttggccccctaagaaaaataactacaaaaccgcaccctaagttttgca 27178232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 27178458 - 27178362
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct--aagaaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||||||| ||| | |||||||| ||||||| ||||||  ||| ||  || |||||||||||||||  | ||||||||||||||| ||||    
T  27178458 ttaatagcagttttagccctccaactttttcaaagttgtgattttgacctgctaaaaaaaaaaactacaaaaccaccccctaagttttgcatctgtg 27178362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 29512558 - 29512611
Alignment:
Q  131 agttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||| |||||||||||||| |||||||||||||| | | ||||||||||||    
T  29512558 agttttagccccctaactttttcaaagttgcgattttggacccctaagaaaaaa 29512611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 33329940 - 33329825
Alignment:
Q  116 taaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-------aaaaaactacaaaactgctccctaagtttt 208  Q
    |||||| ||||||||||||||| ||||| ||||||   || ||||||||||| ||| ||||||       ||||||||||||||| |  |||||||| ||    
T  33329940 taaaggtttaatagcagttttaaccccccaactttcccaacgttgcgattttggccccctaagaagaaaaaaaaaactacaaaaccgtcccctaagtatt 33329841  T
Q  209 gcatttgtgacagttt 224  Q
    ||||||||| ||||||    
T  33329840 gcatttgtggcagttt 33329825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 38177178 - 38177251
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaac 193  Q
    |||||||| ||| ||||| |||| |||||||   |||||||||||||| ||| |||||||||||| ||||||||    
T  38177178 ggcttaatggcaattttagccccttaactttcccaaagttgcgattttggccccctaagaaaaaattacaaaac 38177251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 47189847 - 47189802
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  47189847 aaaaaactacaaaaccgctccataagttttgcatttgtggcagttt 47189802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 53184831 - 53184758
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaa 192  Q
    |||||||||||||||||  | |||||||||||   ||||||||||||| ||| |||||||| ||||||||||||    
T  53184831 ggcttaatagcagttttcgctccctaacttttacgaagttgcgatttttgccacctaagaaaaaaactacaaaa 53184758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 578722 - 578637
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagtttt 208  Q
    |||||| |||||||| || ||||||||||  |||||||||||||| ||| ||||||  ||||||||||||||| || |||||||||||    
T  578722 ttaatatcagttttagcctcctaacttttccaaagttgcgattttggcc-cctaagaaaaaaaactacaaaaccgc-ccctaagtttt 578637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 4474378 - 4474291
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||  || ||||||||||   ||||||||||||| ||| ||||| |||||| |||||||| || | ||||||||||||    
T  4474378 ttaatagcagttttctcctcctaacttttacgaagttgcgattttggccccctaa-aaaaaattacaaaaccgccctctaagttttgca 4474291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 36687920 - 36687849
Alignment:
Q  109 tataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa 180  Q
    ||||||||| ||| ||||||||||||||| |||  ||| ||||  |||||||||||||||| | ||||||||    
T  36687920 tataaaatataggtttaatagcagttttagcccattaatttttccaaagttgcgattttagtcccctaagaa 36687849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 44436668 - 44436606
Alignment:
Q  164 ttttagcctcctaagaaaaaa--ctacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||| ||||||||||||  ||||||||| || ||||||||||||||| |||| ||||||    
T  44436668 ttttagccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatctgtggcagttt 44436606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 86888 - 86814
Alignment:
Q  110 ataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||| || ||||||||||| ||||||   |||||||||||  | ||||||||||||| ||| ||||||||||||    
T  86888 ataaattataggcttaataggagttttcgtcccctaactttcatgaagttgcgattttggccccctaagaaaaaa 86814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 28712451 - 28712548
Alignment:
Q  115 ataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa-aactacaaaactgctccctaagttttgcat 212  Q
    ||||||||||||||| |||| |  |||| ||  ||| ||||||||| |||||| ||| |||||||||| ||||||||||  || |||||||||||||||    
T  28712451 ataaaggcttaatagtagttcttgcccc-tacgtttcttaaagttgtgattttggccccctaagaaaaaaactacaaaatcgccccctaagttttgcat 28712548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 34336399 - 34336498
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagt 222  Q
    ||||||||||||||| || ||||||||| | |||||| ||||||||| | | ||  |||||| || ||||| || |||||||||||| | ||||| ||||    
T  34336399 ttaatagcagttttagcctcctaactttctaaaagttacgattttagtccctta--aaaaaagtataaaaccgccccctaagttttgtacttgtgccagt 34336496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 3192774 - 3192862
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaa-gaaaaaactacaaaactgctccctaagtttt 208  Q
    |||||||||| ||||||| |||| ||||||||| ||||||||| ||||   | ||||| |||||||||||||||| |  |||||||||||    
T  3192774 ggcttaatagaagttttagcccc-taactttttcaaagttgcgcttttcatcccctaaggaaaaaactacaaaaccgacccctaagtttt 3192862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 19404706 - 19404661
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    ||||| |||||||||| || |||||||||| |||||||||||||||    
T  19404706 cttaacagcagttttaacctcctaacttttctaaagttgcgatttt 19404661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 43747533 - 43747488
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    ||||||||||||||| || ||||||||||||||||| || ||||||    
T  43747533 aaaaaactacaaaaccgccccctaagttttgcatttatggcagttt 43747488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 12759493 - 12759533
Alignment:
Q  110 ataaaataaaggcttaatagcagttttacccccctaacttt 150  Q
    ||||||||||||||||||| |||||||  ||||||||||||    
T  12759493 ataaaataaaggcttaataacagtttttgccccctaacttt 12759533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 25248964 - 25248908
Alignment:
Q  155 aagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||| ||||||||| ||||||||||||| | || |  |||||||||||    
T  25248964 aagttgcgattttggcctcctaaaaaaaaactacaaatccgccctttaagttttgca 25248908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 33329611 - 33329675
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    |||||||||||||||||  ||| |||||||||   |||||||||||||  || ||||||||||||    
T  33329611 ggcttaatagcagttttcgccctctaacttttacgaagttgcgattttgaccccctaagaaaaaa 33329675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 22846756 - 22846658
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||||||||| ||||  ||||||||||||||||| ||||||||||||||| ||||    
T  22846756 ggcttaatagcagttttaaccccttaacttttttaaagttgtgattttagcctcttaagaaaaaaaactacaaaactgttccctaagttttgcaattgt 22846658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 23702450 - 23702343
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||||||||||||| ||||||||||||   |||||||||||||||||| |||||||| |||| ||||||| ||  |||||||||||||||||||    
T  23702450 aaggcttaatagcagttttagccccctaactttccaaaagttgcgattttagccccctaagaaaaaaattacaaaattgtcccctaagttttgcatttgt 23702351  T
Q  217 gacagttt 224  Q
    ||||||||    
T  23702350 gacagttt 23702343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 20853377 - 20853482
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtga 218  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||  || ||||| |||||||||||||||  | ||||||||||||||| ||||     
T  20853377 aggcttaatagcagttttagccccctaactttcttgaagttgcgattttgaccccctaaaaaaaaactacaaaaccaccccctaagttttgcatatgtgg 20853476  T
Q  219 cagttt 224  Q
    ||||||    
T  20853477 cagttt 20853482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 32071326 - 32071223
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtga 218  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||  || ||||||||||||||||||||| || ||||||||||||||| | |||    
T  32071326 aggcttaatagcagttttagcccc-taacttttctaaagttgcgattttgacc-cctaagaaaaaactacaaaaccgccccctaagttttgcatatatga 32071229  T
Q  219 cagttt 224  Q
    ||||||    
T  32071228 cagttt 32071223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 41602926 - 41602819
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||||||| |||||||| |||   |||||||||||||||||||||||||||  ||||||||||||| || || ||||||||||   |||    
T  41602926 aggcttaatagcagttttagccccctaagtttcaaaaagttgcgattttagcctcctaagaaaaaaaactacaaaaccgccccttaagttttgcccctgt 41602827  T
Q  217 gacagttt 224  Q
    ||||||||    
T  41602826 gacagttt 41602819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 29044862 - 29044755
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa-ctacaaaactgctccctaagttttgcatttg 215  Q
    ||||||||||||||||||||| |||||||||||   ||||||| ||||||| | | |||||||||||| |||||||||||  || |||||||||||||||    
T  29044862 aaaggcttaatagcagttttagccccctaacttccctaaagttacgattttggtc-cctaagaaaaaacctacaaaactgtcccataagttttgcatttg 29044764  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  29044763 tggcagttt 29044755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 28349622 - 28349535
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagt 205  Q
    ||||||||||| ||||||| ||||||||||||   |||||||||||||| ||| |||||||| |||| |||||||| |||||||||||    
T  28349622 aggcttaatagtagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaattacaaaaccgctccctaagt 28349535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 41487520 - 41487431
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||| ||| |||||||||  |||||||||||||||||| | ||||  ||||||||||||||| || ||||||||||||||    
T  41487520 ttaatagcagttttagccctctaacttttccaaagttgcgattttagcc-cttaagaaaaaaaactacaaaaccgccccctaagttttgca 41487431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 37939908 - 37940017
Alignment:
Q  114 aataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatt 213  Q
    ||||| || ||||||||||||||| || | ||| ||||| |||||||||||||| ||| ||| | |||||||||||||||  | |||||||||||||||     
T  37939908 aataatggtttaatagcagttttagcctcttaattttttcaaagttgcgattttggcc-ccttaaaaaaaactacaaaaccaccccctaagttttgcata 37940006  T
Q  214 tgtgacagttt 224  Q
    |||| ||||||    
T  37940007 tgtggcagttt 37940017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 25896993 - 25897054
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  25896993 ttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaacaaaaaa 25897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 36688311 - 36688223
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagtttt 208  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||||  || |||||||| ||||||| |||| ||| |||||||||||    
T  36688311 ggcttaatagcagttttaaccccctaactttttcaaagttgtgattttgaccccctaagaaaaaaactataaaattgc-ccctaagtttt 36688223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 35213023 - 35213134
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||| |||||||||||||| |||||  ||| ||||||||   ||||||||||||||  || ||||| |||||||||||||||||| || |||||||||||    
T  35213023 aaaaaaaaggcttaatagcggttttcgcccactaactttgacaaagttgcgattttgaccccctaa-aaaaaactacaaaactgccccttaagttttgca 35213121  T
Q  212 tttgtgacagttt 224  Q
      ||| |||||||    
T  35213122 actgtaacagttt 35213134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 29657702 - 29657809
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-----aaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||| ||||||||| |||||||||| | |||||||||||||| |||  |||||     ||||||||||||||| || |||||| |||||||| |||    
T  29657702 cttaataggagttttacctccctaactttatcaaagttgcgattttggccctctaagaagaaaaaaaactacaaaaccgccccctaaattttgcatatgt 29657801  T
Q  217 gacagttt 224  Q
    | ||||||    
T  29657802 ggcagttt 29657809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 39890090 - 39889988
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcattt 214  Q
    ||||||||||||||||||||| | || |||| |||||||||||||||||||  ||  |||||||  ||||||||||| | || | ||||||||||||| |    
T  39890090 aaaggcttaatagcagttttagctccttaacctttttaaagttgcgatttttaccctctaagaaaaaaaactacaaatccgccctctaagttttgcatct 39889991  T
Q  215 gtg 217  Q
    |||    
T  39889990 gtg 39889988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 44269433 - 44269334
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    |||||||||||| | ||||| |||||||| ||| | ||||||||||||||  || ||||||||||||||  ||||||||    |||||||||||||||||    
T  44269433 aaggcttaatagtaattttaaccccctaattttctcaaagttgcgattttgaccccctaagaaaaaactttaaaactgccttttaagttttgcatttgtg 44269334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 45177201 - 45177307
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||||| |||| || ||||||||| | ||||||||||||||   | ||||||  ||||||||||||||  |  ||||||||||||||| ||||    
T  45177201 ggcttaatagcagatttagcctcctaactttctcaaagttgcgattttgatcccctaagaaaaaaaactacaaaatcgtcccctaagttttgcatctgtg 45177300  T
Q  218 acagttt 224  Q
    |||||||    
T  45177301 acagttt 45177307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 25144219 - 25144159
Alignment:
Q  155 aagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||||| |||||||||||||||||||||  | |||||||||||||| ||||    
T  25144219 aagttgcgattttagcc-cctaagaaaaaactacaaaaccaccccctaagttttgcaattgt 25144159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 26823828 - 26823932
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgtgac 219  Q
    |||||||||||||||| ||| |||||||| | |||||| |||||||  || | ||||  ||||||||||||||   | |||||||||||||||||||| |    
T  26823828 cttaatagcagttttaaccctctaactttctcaaagttacgattttgaccccttaagaaaaaaaactacaaaatcaccccctaagttttgcatttgtggc 26823927  T
Q  220 agttt 224  Q
    |||||    
T  26823928 agttt 26823932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 37263650 - 37263546
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtga 218  Q
    |||||||||| || ||||| || |||||||||   ||||||||||||||   |  |||||||||||||||||||| || |||||||||||||| ||||||    
T  37263650 aggcttaatatcaattttaacctcctaactttccaaaagttgcgattttgatccactaagaaaaaactacaaaaccgc-ccctaagttttgcacttgtga 37263552  T
Q  219 cagttt 224  Q
     |||||    
T  37263551 tagttt 37263546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 6807480 - 6807377
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgac 219  Q
    |||||||||||| |||||  |||||||||||   |||||||| |||||  ||  |||| |||||||||||||||  | |||||||||||||||||||| |    
T  6807480 ggcttaatagcaattttagtcccctaactttcccaaagttgcaattttgaccctctaa-aaaaaactacaaaaccaccccctaagttttgcatttgtggc 6807382  T
Q  220 agttt 224  Q
    |||||    
T  6807381 agttt 6807377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 20699504 - 20699460
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  20699504 ttaatagcagttttaaccccctaacttttttaaagttgcaatttt 20699460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 30539305 - 30539199
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa--ctacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||||||| |||  |||||||   |||||||||||||| | | ||||||||||||  ||||||||| |  ||||||||||||||| |||    
T  30539305 aggcttaatagcagttttagccct-taactttcccaaagttgcgattttggtcccctaagaaaaaaaactacaaaaccgtcccctaagttttgcatctgt 30539207  T
Q  217 gacagttt 224  Q
    | ||||||    
T  30539206 ggcagttt 30539199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 22192618 - 22192519
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||| ||||||||||||||||| |||  | ||||||||||| |||||||  |||||  || | ||||||||||||||||||| |   |||||||||||||    
T  22192618 aaaaaaaaggcttaatagcagtcttaatctcctaactttttcaaagttgtaattttgaccccttaagaaaaaactacaaaaccgtctcctaagttttgca 22192519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 37813159 - 37813247
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaa 203  Q
    ||||||||||||||||||||  ||||||||||||   ||| || ||||||| ||| ||||||  ||||||||||||||| || ||||||    
T  37813159 aaaggcttaatagcagttttcgccccctaactttcacaaatttacgattttggccccctaagaaaaaaaactacaaaaccgccccctaa 37813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 41487197 - 41487293
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaa--aaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||||  ||||| || |||    |||||||||||||  || |||||||||  |||||||||||| || ||||||||||||||    
T  41487197 aaaggcttaatagcagttttcgcccccgaattttcacgaagttgcgattttgaccccctaagaaacaaaactacaaaaccgccccctaagttttgca 41487293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 17070899 - 17070999
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct-aagaaaaaactacaaaactgctccctaagttttgc 210  Q
    |||| ||||||||||||||||||||  |||| |||||||    ||||||||||||| ||| ||| || ||||||| |||||||   ||||||||||||||    
T  17070899 aaaaaaaaggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaaaaaaaaaacaacaaaaccattccctaagttttgc 17070998  T
Q  211 a 211  Q
    |    
T  17070999 a 17070999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 17577373 - 17577273
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct-aagaaaaaactacaaaactgctccctaagttttgc 210  Q
    |||| ||||||||||||||||||||  |||| |||||||    ||||||||||||| ||| ||| || ||||||| |||||||   ||||||||||||||    
T  17577373 aaaaaaaaggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaaaaaaaaaacaacaaaaccattccctaagttttgc 17577274  T
Q  211 a 211  Q
    |    
T  17577273 a 17577273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 18093404 - 18093302
Alignment:
Q  108 atataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagt 205  Q
    ||||||| |||| ||||||||||||||||| |||||||| ||||   |||||| |||||| ||| ||||||||  |||||||||||| |   ||||||||    
T  18093404 atataaattaaatgcttaatagcagttttagccccctaaattttaagaagttg-gatttttgccccctaagaaataaaactacaaaattatcccctaagt 18093306  T
Q  206 tttg 209  Q
    ||||    
T  18093305 tttg 18093302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 14880334 - 14880441
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgatttt-agcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||| |||||||| |||  |||||||| |||||||| |||||| | || || || ||||||||| |||| ||  |||||| |||||||| |||    
T  14880334 aaggcttaataacagttttaaccctttaacttttctaaagttgtgattttgatcccccaaaaaaaaaactataaaattgtcccctaaattttgcatctgt 14880433  T
Q  217 gacagttt 224  Q
    | ||||||    
T  14880434 ggcagttt 14880441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 33298646 - 33298558
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||| |||||||||||  || |||||||||    ||||||||||||| ||| ||||||||||  ||||||||| || ||||||||||||||    
T  33298646 gcttgatagcagttttcgcctcctaactttcacgaagttgcgattttggccccctaagaaaa--ctacaaaaccgccccctaagttttgca 33298558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 6807172 - 6807237
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||||| ||||||  |||| ||||||| |  ||||||||||||| ||| ||||||||||||    
T  6807172 aggcttaatagtagtttttgccccataactttctcgaagttgcgattttggccccctaagaaaaaa 6807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 16982881 - 16982818
Alignment:
Q  164 ttttagcctcctaagaa---aaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||| ||||||||   ||||||||||||| || ||||||||||||||| |||| ||||||    
T  16982881 ttttagccccctaagaaaaaaaaactacaaaaccgccccctaagttttgcatctgtgccagttt 16982818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 27545343 - 27545415
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaa 192  Q
    ||||||||||||||||||| ||  |||||||||  |||||||||||||   || ||||| ||||||||||||||    
T  27545343 aggcttaatagcagttttagccgtctaacttttccaaagttgcgatttcgaccccctaa-aaaaaactacaaaa 27545415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 37813344 - 37813299
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    ||||||||||||||| || ||||||||||||||| |||| ||||||    
T  37813344 aaaaaactacaaaaccgccccctaagttttgcatctgtggcagttt 37813299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 9762513 - 9762422
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct-aagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||| ||||  || ||||||||||   ||||||||||||| ||| | | || ||||||||||||||| | |||||||||||||||    
T  9762513 ggcttaatagcaattttcgccacctaacttttacgaagttgcgattttggccccttgaaaaaaaaactacaaaaccg-tccctaagttttgca 9762422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 15181640 - 15181703
Alignment:
Q  121 gcttaatagcagttttacccccctaactttt-ttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||||||||||| |||| |||||||| | ||||||| |||||| ||| ||||||||||||    
T  15181640 gcttaatagcagttttagccccataacttttctcaaagttgtgatttt-gccccctaagaaaaaa 15181703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 29658009 - 29657922
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||  | ||||||||||  | |||||||||||||  ||  |||| ||||||| |||||||||| || |||||||||||    
T  29658009 ttaatagcagttttcgctccctaactttcatcaagttgcgattttgaccatctaa-aaaaaacaacaaaactgccccttaagttttgca 29657922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 39889771 - 39889863
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||  || | |||||||    ||||||| ||||| ||| | |||||||||| |||||||  ||||| |||||||||||    
T  39889771 aggcttaatagcagttttcgcctcttaactttcacgaagttgcaattttggccccttaagaaaaaattacaaaatcgctccataagttttgca 39889863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 45515932 - 45515980
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    ||||||||| ||||||||| |||| ||| ||||| ||||||||||||||    
T  45515932 aggcttaattgcagttttagccccttaattttttcaaagttgcgatttt 45515980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 19131819 - 19131708
Alignment:
Q  113 aaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcat 212  Q
    |||| |||| |||||||||||||||  || ||||||||| ||||||||||||||| ||| ||||| ||||||||||||||| || |||||||||||||||    
T  19131819 aaattaaggtttaatagcagttttagtcctctaacttttctaaagttgcgatttttgccccctaaaaaaaaactacaaaaccgccccctaagttttgcat 19131720  T
Q  213 ttgtgacagttt 224  Q
     |||||||||||    
T  19131719 ctgtgacagttt 19131708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 32392033 - 32391927
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||| |||||| | |||||||||||| |||||||||||||||||| ||||||||  ||||||||||||| || || |||||||||||| ||||    
T  32392033 ggcttaatagctgttttaactccctaactttttcaaagttgcgattttagccccctaagaaaaaaaactacaaaaccgccccttaagttttgcatgtgtg 32391934  T
Q  218 acagttt 224  Q
    |||||||    
T  32391933 acagttt 32391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 37898034 - 37897926
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcattt 214  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||  ||||||||||||| || ||||||||||||||| |    
T  37898034 aaagccttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgc-ccctaagttttgcatat 37897936  T
Q  215 gtgacagttt 224  Q
    ||| ||||||    
T  37897935 gtggcagttt 37897926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 27904798 - 27904691
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||| ||| | ||||  ||||||||||||||| || |||||||||||||| ||||    
T  27904798 aggcttaatagcagttttagccctctaactttttcaaagttgcgattttggccccgtaagaaaaaaaactacaaaaccgccccctaagttttgcacttgt 27904699  T
Q  217 gacagttt 224  Q
    | ||||||    
T  27904698 ggcagttt 27904691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 3334015 - 3333909
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaaga--aaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    |||||||||| ||||||| |||||||||||||  |||||||||||||| ||| |||||||  |||||||||||||| ||||| |||||||||||| ||||    
T  3334015 ggcttaatagtagttttagccccctaacttttccaaagttgcgattttggccccctaagaagaaaaactacaaaaccgctccataagttttgcatatgtg 3333916  T
Q  218 acagttt 224  Q
     ||||||    
T  3333915 gcagttt 3333909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 12406040 - 12406134
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||| ||| ||||||||  ||||||||||||| || ||||||||||||||    
T  12406040 aggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaagaaaactacaaaaccgccccctaagttttgca 12406134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 25363825 - 25363924
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa---ctacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||    ||||||||||  |||||||||||||| ||||    
T  25363825 ggcttaatagcagttttagcccc-taacttttttaaagttgtgattttggcctcctaagaaaaaaaagttacaaaactgtcccctaagttttgcaattgt 25363923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 36798163 - 36798277
Alignment:
Q  113 aaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagttttg 209  Q
    |||||||||||||||||||||||||  ||| ||||||||  |||||||| ||||| ||| ||||||   |||||||||||||||  | ||||||||||||    
T  36798163 aaataaaggcttaatagcagttttagacccttaacttttccaaagttgcaattttggccccctaagaaaaaaaaactacaaaaccaccccctaagttttg 36798262  T
Q  210 catttgtgacagttt 224  Q
    ||| |||| ||||||    
T  36798263 catctgtggcagttt 36798277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 36798492 - 36798397
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||| | | ||||||||  |||||| |||||| || ||||||||||||||    
T  36798492 aaggcttaatagcagttttagccccctaactttctcaaagttgcgattttggtcccctaagaaaaaaaactgcaaaaccgccccctaagttttgca 36798397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 43098337 - 43098248
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||  ||||||||||||| |||||| ||||||| ||| ||||| ||||||||||||||| ||  |||||||||||||    
T  43098337 gcttaatagcagttttagtcccctaactttttcaaagttacgatttttgccccctaaaaaaaaactacaaaaccgc-gcctaagttttgca 43098248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 8284158 - 8284259
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagt 222  Q
    ||||||||| ||||| |||| ||||||||  |||||||||||||| ||||||||| |||||||||||| ||  |  |||||||||||||| |||| ||||    
T  8284158 ttaatagcaattttaaccccataacttttccaaagttgcgattttggcctcctaaaaaaaaactacaataccacctcctaagttttgcatctgtggcagt 8284257  T
Q  223 tt 224  Q
    ||    
T  8284258 tt 8284259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 40276347 - 40276244
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa---aaaactacaaaactgctccctaagttttgcatt 213  Q
    ||||||||||||||||||||| ||||||||||||   ||| ||||||||||| || ||||||||   ||||||||||||| |  |||||||||||||||     
T  40276347 aaaggcttaatagcagttttatccccctaactttcccaaatttgcgattttaaccccctaagaaaaaaaaactacaaaaccgtcccctaagttttgcata 40276248  T
Q  214 tgtg 217  Q
    ||||    
T  40276247 tgtg 40276244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 12406365 - 12406248
Alignment:
Q  109 tataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagt 205  Q
    ||||| || |||||||||||||| ||||| |||||||||||||| ||||||| |||||| ||| ||||||   ||||||| ||||||| || ||||||||    
T  12406365 tataatattaaggcttaatagcaattttagccccctaactttttcaaagttgagattttggcc-cctaagaaaaaaaaacaacaaaaccgccccctaagt 12406267  T
Q  206 tttgcatttgtgacagttt 224  Q
    ||| ||| |||| ||||||    
T  12406266 tttacatctgtggcagttt 12406248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 20630057 - 20629959
Alignment:
Q  122 cttaatagcagttttaccc-ccctaacttttttaaagttgcgattttagcctcctaagaaaaaa--ctacaaaactgctccctaagttttgcatttgtg 217  Q
    |||||||||||||||| || |||||||||||  ||||||| |||||| ||| | ||||||||||  ||||||||| || ||||||||||||||||||||    
T  20630057 cttaatagcagttttagcctccctaacttttccaaagttgtgattttggccccttaagaaaaaaaactacaaaaccgccccctaagttttgcatttgtg 20629959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 31080480 - 31080582
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct-aagaaaaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    |||||| |||||||| ||| |||||||||  ||||||||||||||  |||||| || |||||||||||||||  | ||||||||||||||| |||| |||    
T  31080480 ttaatatcagttttagccctctaacttttccaaagttgcgattttgacctcctaaaaaaaaaactacaaaaccaccccctaagttttgcatctgtggcag 31080579  T
Q  222 ttt 224  Q
    |||    
T  31080580 ttt 31080582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 22300599 - 22300706
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct-aagaaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||||||||| ||  ||| || ||||||||||||||| |  || ||||||||| || |||    
T  22300599 aaggcttaatagtagttttagccctctaacttttctaaagttgcgattttggcaccctaaaaaaaaaactacaaaaccgtcccttaagttttgtatatgt 22300698  T
Q  217 gacagttt 224  Q
    | ||||||    
T  22300699 ggcagttt 22300706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 30604399 - 30604295
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaa---actacaaaactgctccctaagttttgcatttgtga 218  Q
    |||||||||||||| | || ||||| ||| | |||||||||||||||||| |||||||||||   |||||||||| || ||||||||||||||  ||||     
T  30604399 cttaatagcagtttcagccacctaattttctcaaagttgcgattttagcc-cctaagaaaaaattactacaaaaccgccccctaagttttgcacctgtgg 30604301  T
Q  219 cagttt 224  Q
    ||||||    
T  30604300 cagttt 30604295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 41138553 - 41138618
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaa 177  Q
    |||||||||||||||| ||| ||||| ||||||| |||| | |||||||||||||||||| |||||    
T  41138553 aaaataaaggcttaattgcacttttagccccctatctttctaaaagttgcgattttagccccctaa 41138618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 25910720 - 25910783
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaa 183  Q
    |||||||||| |||||||||||| |||||||| ||||||||| |||||| ||| |||||||||||    
T  25910720 aggcttaataacagttttacccc-ctaactttcttaaagttgtgattttggccccctaagaaaaa 25910783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 35166285 - 35166388
Alignment:
Q  108 atataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagtt 206  Q
    ||||||| ||||||||||||||||||||||  ||  ||||||||  ||| ||||||||||  || |||||| ||||||||||||||  || |||||||||    
T  35166285 atataaattaaaggcttaatagcagtttta-gcctttaacttttccaaaattgcgattttgaccccctaagaaaaaaactacaaaatcgccccctaagtt 35166383  T
Q  207 ttgca 211  Q
    |||||    
T  35166384 ttgca 35166388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 24779271 - 24779322
Alignment:
Q  116 taaaggcttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    |||| ||||||||| ||||||| || ||||||||||||||||||||||||||    
T  24779271 taaaagcttaatagtagttttagcctcctaacttttttaaagttgcgatttt 24779322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 40132904 - 40133003
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgatttt-agcctcctaagaaaaaactacaaaactgc-tccctaagttttgcatttgtg 217  Q
    ||||||||||||||||||  || |||||||||| |||||||||||||| | | || ||| ||||||||| ||||| ||  |||||||||||||| |||||    
T  40132904 ggcttaatagcagttttagtcctctaactttttcaaagttgcgattttgaccttcttaaaaaaaaactaaaaaaccgcgcccctaagttttgcaattgtg 40133003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 19340762 - 19340853
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||| ||||||||||||||| |||||||||||||  ||| ||||||||||  || ||||  |||||| |||||||  || ||||||||||||||    
T  19340762 aaggtttaatagcagttttagccccctaacttttccaaaattgcgattttgacccccta--aaaaaattacaaaatcgccccctaagttttgca 19340853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 25911037 - 25910955
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa-ctacaaaactgctccctaa 203  Q
    |||||||||||||||  ||||||||||||    |||||| ||||||||||  ||||||||||| |||||||||||| ||||||    
T  25911037 cttaatagcagttttcgccccctaactttcacgaagttgagattttagccctctaagaaaaaaactacaaaactgccccctaa 25910955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 2974949 - 2974854
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||  ||||||||||||    ||||||||||||| ||| || |||   ||||||||||| ||| || ||||||||||||||    
T  2974949 aggcttaatagcagtttttgccccctaactttcacgaagttgcgattttggccccccaaggaaaaaaaactacagaaccgccccctaagttttgca 2974854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 6131849 - 6131777
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaa 192  Q
    |||||||||||||||||| |  |||||||||  ||||||||||||||| ||| |||||| ||||||||||||||    
T  6131849 ggcttaatagcagttttagctacctaactttcctaaagttgcgattttggcc-cctaagaaaaaaactacaaaa 6131777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 24134371 - 24134467
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||| ||||||||   ||||||| ||||| |||||||| ||||| ||| ||||||  |||||| ||||||||||| ||||||||||| || |||||    
T  24134371 ttaattgcagttttcgtcccctaattttttcaaagttgcaattttggccccctaagaaaaaaaattacaaaactgccccctaagttttccacttgtg 24134467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 34319959 - 34320023
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    |||| ||||||||||||| | ||||||||||| || ||||||||||||| ||| ||||||||||||    
T  34319959 aggcataatagcagtttt-cgcccctaactttcttgaagttgcgattttggccccctaagaaaaaa 34320023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 24405493 - 24405537
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||    
T  24405493 ttaatagcagttttagtcccctaactttttcaaagttgcgatttt 24405537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 26562989 - 26563068
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgc 196  Q
    |||||||||||||||||||  || |||||||||  ||||||| |||||| |  |||||||  ||||||||||||||||||    
T  26562989 aggcttaatagcagttttagtccgctaacttttccaaagttgtgattttggtgtcctaagaaaaaaaactacaaaactgc 26563068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 40276014 - 40276082
Alignment:
Q  116 taaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||||||| |||||||   |||||||||||  | |||||||||||||||||  |||||||||||    
T  40276014 taaaggcttaatatcagttttcggcccctaactttcgtgaagttgcgattttagccctctaagaaaaaa 40276082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 20629739 - 20629828
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagttttg 209  Q
    ||||||||||||||  |||| |||||||   ||||||||||||||| || ||||||   |||||||||||||||  | ||||||||||||    
T  20629739 ttaatagcagttttcgccccttaactttcacaaagttgcgattttaaccccctaagaaaaaaaaactacaaaacaaccccctaagttttg 20629828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 21066375 - 21066469
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct--aagaaaaaactacaaaactgctccctaagttttgcat 212  Q
    ||||||||| || ||||| |||||||||||||  |||||| ||||||| ||| |||  || |||||||| ||||||||| || ||| ||||||||    
T  21066375 ggcttaataacaattttagccccctaacttttccaaagtttcgattttggcccccttgaaaaaaaaacttcaaaactgccccttaaattttgcat 21066469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 26702464 - 26702541
Alignment:
Q  145 aacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||  |||||| ||||||| ||||||||| |||||| |||||||| || ||| |||||||||||||||| ||||||    
T  26702464 aacttttccaaagttacgattttggcctcctaa-aaaaaattacaaaaccgccccc-aagttttgcatttgtggcagttt 26702541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 26972197 - 26972274
Alignment:
Q  145 aacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||  |||||| ||||||| ||||||||| |||||| |||||||| || ||| |||||||||||||||| ||||||    
T  26972197 aacttttccaaagttacgattttggcctcctaa-aaaaaattacaaaaccgccccc-aagttttgcatttgtggcagttt 26972274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 3999403 - 3999345
Alignment:
Q  125 aatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaa 183  Q
    |||||||| |||| |||| ||||||||| ||||||| || ||||||||||||| |||||    
T  3999403 aatagcaggtttagccccataactttttcaaagttgtgactttagcctcctaaaaaaaa 3999345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 35166608 - 35166514
Alignment:
Q  119 aggcttaatagcagtttta-cccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||  |||||||||||||    ||||||||||||| | | |||||||| ||||||||||||   | ||||||||||||||    
T  35166608 aggcttaatagcagttttcgcccccctaactttcacgaagttgcgattttggtcccctaagaaaaaaactacaaaatcaccccctaagttttgca 35166514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 3333695 - 3333784
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||  ||||||||||||  | |||||||||||||   | |||||| ||||||||||||||| |  | ||||||||||||    
T  3333695 ttaatagcagttttcgccccctaactttcatgaagttgcgattttgatcccctaagaaaaaaactacaaaaccgtcctctaagttttgca 3333784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 3999082 - 3999159
Alignment:
Q  116 taaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaa 192  Q
    |||||| ||||||||||||||  ||||||||||||    |||||||||||||  || |||||| ||||||||||||||    
T  3999082 taaaggtttaatagcagttttcgccccctaactttcacgaagttgcgattttgaccccctaagaaaaaaactacaaaa 3999159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 37897770 - 37897815
Alignment:
Q  171 ctcctaagaaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||||||| |||||||| || |||||||||||||| ||||    
T  37897770 ctcctaagaaaaaattacaaaaccgccccctaagttttgcaattgt 37897815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 16133009 - 16132951
Alignment:
Q  155 aagttgcgattttagcctcctaagaaaa---aactacaaaactgctccctaagttttgc 210  Q
    ||||||||||||||||| ||||||||||   |||||||||| ||| |||||| ||||||    
T  16133009 aagttgcgattttagccccctaagaaaaaagaactacaaaattgccccctaaattttgc 16132951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 25364136 - 25364048
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||  ||| ||||||||    ||||||| ||||| ||| ||||| || |||||||||||| || ||||||| ||||||    
T  25364136 ttaatagcagttttcaccctctaactttcacgaagttgcaattttggccccctaaaaagaaactacaaaaccgccccctaagatttgca 25364048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 14449608 - 14449492
Alignment:
Q  111 taaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagttt 207  Q
    ||||| || |||||||||| ||||||| |||||||||||||  |||||||||||||| ||||| ||||   ||||||||||||||| |||||||||||||    
T  14449608 taaaaaaatggcttaatagtagttttagccccctaacttttccaaagttgcgattttggcctcttaaggaaaaaaaactacaaaaccgctccctaagttt 14449509  T
Q  208 tgcatttgtgacagttt 224  Q
    |||||||||| ||||||    
T  14449508 tgcatttgtggcagttt 14449492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 35615315 - 35615407
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaa--gaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||  |||||||||||||||||||  |||||||||||||    
T  35615315 gcttaatagcagttttagccccctaacttttctaaagttgcgattttggccccctaaaggaaaaaactacaaaactgcctcctaagttttgca 35615407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 14060760 - 14060847
Alignment:
Q  124 taatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||| |||||||||||||| ||||||||||||||  || ||||||||||||||||||||| || ||||||| ||||||    
T  14060760 taatagcagttttaaccccctaactttttcaaagttgcgattttgaccccctaagaaaaaactacaaaaccgccccctaagctttgca 14060847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 1420537 - 1420627
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct-aagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||| |||||||||||||  |||||||||||||| ||||||| || ||||||||||||||| || ||||||||||||||    
T  1420537 cttaatagcagttttagccccctaacttttccaaagttgcgattttggcctcctaaaaaaaaaactacaaaaccgccccctaagttttgca 1420627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 51362527 - 51362645
Alignment:
Q  111 taaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-----aaaaaactacaaaactgctccctaagt 205  Q
    |||| |||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| ||| ||||||     ||||||||||||||| || ||||||||    
T  51362527 taaattaaaggtttaatagtagttttagccccctaacttttctaaagttgcgattttggccccctaagaagaaaaaaaactacaaaaccgccccctaagt 51362626  T
Q  206 tttgcatttgtgacagttt 224  Q
    ||||||| |||| ||||||    
T  51362627 tttgcatatgtggcagttt 51362645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 44356711 - 44356606
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||||||||||| |||| ||||||| | |||||||||||||| ||| |||||||| |||| |||||||| || ||||||||||||||| ||||    
T  44356711 aggcttaatagcagttttagcccc-taactttctcaaagttgcgattttggccgcctaagaaaaaaattacaaaaccgccccctaagttttgcatatgtg 44356613  T
Q  218 acagttt 224  Q
     ||||||    
T  44356612 gcagttt 44356606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 2016789 - 2016897
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaa--actacaaaactgctccctaagttttgcatttg 215  Q
    ||||||| |||||||||||| |||||||||||||  |||||||||||||| |||  | ||||||||  ||||||||||||| ||||||||||||||  ||    
T  2016789 aaggcttgatagcagttttagccccctaacttttccaaagttgcgattttggccctcaaagaaaaaagactacaaaactgccccctaagttttgcacatg 2016888  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  2016889 tggcagttt 2016897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 25909486 - 25909586
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||||||| |||||||||||||  ||||||| |||||| ||| ||||||  ||||||||| ||||| || |||||||||||||| ||||    
T  25909486 aggcttaatagcagttttaaccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactataaaaccgccccctaagttttgcacttgt 25909585  T
Q  217 g 217  Q
    |    
T  25909586 g 25909586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 42526258 - 42526158
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagt 222  Q
    ||||||||||||||| |||||||||||| |||||||||||||||| ||| | ||| ||||||||||||||| |  || |||||||||||| |||| ||||    
T  42526258 ttaatagcagttttaaccccctaactttcttaaagttgcgatttttgccccataa-aaaaaactacaaaaccgtcccataagttttgcatatgtggcagt 42526160  T
Q  223 tt 224  Q
    ||    
T  42526159 tt 42526158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 2836898 - 2837005
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||| |||||||| |||||||||||||  |||| ||||||||| ||| || |||  ||||||||||||||| || ||||||||||||||| |||    
T  2836898 aggcttaataacagttttaaccccctaacttttccaaagctgcgattttggcccccaaagaaaaaaaactacaaaaccgccccctaagttttgcatgtgt 2836997  T
Q  217 gacagttt 224  Q
    || |||||    
T  2836998 gagagttt 2837005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 21957532 - 21957624
Alignment:
Q  113 aaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagt 205  Q
    |||||||||||||||| |||||||| | |||||||||| | ||||||||||||||  || ||||| ||||||||||||||| || ||||||||    
T  21957532 aaataaaggcttaatatcagttttagctccctaactttctcaaagttgcgattttgaccccctaaaaaaaaactacaaaaccgccccctaagt 21957624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 10060013 - 10059905
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag----aaaaaactacaaaactgctccctaagttttgcatttg 215  Q
    ||||||||||||||||||  ||||||| ||||| |||||||||||||| ||| | ||||    ||||||||||||||| || ||||||||||||||| ||    
T  10060013 ggcttaatagcagttttagacccctaattttttcaaagttgcgatttttgccccttaagaaaaaaaaaactacaaaaccgccccctaagttttgcatctg 10059914  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  10059913 tggcagttt 10059905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 12719769 - 12719653
Alignment:
Q  111 taaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa---aaaactacaaaactgctccctaagttt 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||   |||||||  ||||| ||| ||||||||   |||||||||||||  | ||||||||||    
T  12719769 taaaaaaaaggcttaatagcagttttaaccccctaactttcccaaagttgatattttggccccctaagaaaaaaaaactacaaaaccaccccctaagttt 12719670  T
Q  208 tgcatttgtgacagttt 224  Q
    ||||| |||| ||||||    
T  12719669 tgcatctgtggcagttt 12719653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 212
Target Start/End: Complemental strand, 21871696 - 21871607
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcat 212  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||  || ||||| ||||||||||||||| ||  ||||||||||||||    
T  21871696 cttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaa-aaaaaactacaaaaccgcctcctaagttttgcat 21871607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 212
Target Start/End: Complemental strand, 21927557 - 21927468
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcat 212  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||  || ||||| ||||||||||||||| ||  ||||||||||||||    
T  21927557 cttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaa-aaaaaactacaaaaccgcctcctaagttttgcat 21927468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 53312285 - 53312393
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaa---aaactacaaaactgctccctaagttttgcatttg 215  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||| ||| |||||||||   ||||||||||||  | |||||| |||||||  ||    
T  53312285 aggcttaatagcatttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaacaaactacaaaaccaccccctaaattttgcacatg 53312384  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  53312385 tggcagttt 53312393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 14061018 - 14060911
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||||||| |||| | |||||| ||||| |||||||||||||| ||  ||||||||  |||||||||||||||  ||||||||||| ||| |||    
T  14061018 aggcttaatagcagctttaactccctaattttttcaaagttgcgattttggctccctaagaaaaaaaactacaaaactgtcccctaagttttacatctgt 14060919  T
Q  217 gacagttt 224  Q
    | ||||||    
T  14060918 ggcagttt 14060911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 1420859 - 1420753
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||||||| |||| |||||||   |||||| ||||||| | | ||||||||||  ||||||||||| || || ||||||||||||||||    
T  1420859 aggcttaatagcagttttagccccttaactttcccaaagttacgattttggtcccctaagaaaaagaactacaaaaccgccccataagttttgcatttgt 1420760  T
Q  217 gacagtt 223  Q
    | |||||    
T  1420759 ggcagtt 1420753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 6207491 - 6207389
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-----aaaaaactacaaaactgctccctaagttttgcatt 213  Q
    ||||||||||||||||||| |||||||| |||  |||||||| |||||| ||| ||||||     ||||||||||||||| || ||||||||||||||||    
T  6207491 aggcttaatagcagttttagccccctaattttcctaaagttgtgattttggcc-cctaagaagaaaaaaaactacaaaaccgccccctaagttttgcatt 6207393  T
Q  214 tgtg 217  Q
    ||||    
T  6207392 tgtg 6207389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 11824182 - 11824294
Alignment:
Q  114 aataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaaga---aaaaactacaaaactgctccctaagttttgc 210  Q
    |||| ||||||||||||||||||| ||||||||||||  |||||||| |||||| |   |||||||   |||||||||||||| || |||||||||||||    
T  11824182 aatataggcttaatagcagttttaaccccctaactttcctaaagttgtgattttggttccctaagaaacaaaaactacaaaaccgc-ccctaagttttgc 11824280  T
Q  211 atttgtgacagttt 224  Q
    || |||| ||||||    
T  11824281 atgtgtggcagttt 11824294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 19909170 - 19909247
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaaga--aaaaactacaaaac 193  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||| ||| |||||||  ||||||||||||||    
T  19909170 aaaggcttaatagcagttttaaccccctaactttctcaaagttgcgattttggcc-cctaagaagaaaaactacaaaac 19909247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 21957780 - 21957688
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||| |||| |||||   ||||||||||||||| ||  |||||||||||||    
T  21957780 gcttaatagcagttttagccccctaacttttccaaagttgcgattttggcct-ctaagaaaaaaaaactacaaaaccgcctcctaagttttgca 21957688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 23759889 - 23759782
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||| || ||||| |||| |||||||  ||||||||||||||| | | |||||||| ||||||||||||| |  |||||||||||| || |||    
T  23759889 aaggcttaataacaattttaaccccttaactttcataaagttgcgattttggtcccctaagaaaaaaactacaaaaccgtcccctaagttttgtatctgt 23759790  T
Q  217 gacagttt 224  Q
    ||||||||    
T  23759789 gacagttt 23759782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 219
Target Start/End: Complemental strand, 34773610 - 34773509
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||||||| |||||| | ||| ||| |||  |||||||| ||||||||| ||||| ||||||||||||||  || ||||||||||||||| |||    
T  34773610 aaaggcttaatagccgttttagcacccaaacatttccaaagttgctattttagccccctaa-aaaaaactacaaaatcgccccctaagttttgcatctgt 34773512  T
Q  217 gac 219  Q
    |||    
T  34773511 gac 34773509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 53925061 - 53924959
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    |||||| || ||||| || |||||||||| ||||||||||||||| | | |||||||| ||||||| ||||   | ||||||||||||||||||||||||    
T  53925061 ttaataacaattttagcctcctaacttttctaaagttgcgattttggtcccctaagaaaaaaactataaaatctccccctaagttttgcatttgtgacag 53924962  T
Q  222 ttt 224  Q
    |||    
T  53924961 ttt 53924959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 2017103 - 2017038
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||||||||||||| |||| |||||||  ||||||||||||||| ||||| ||||||||||    
T  2017103 aggcttaatagcagttttagccccataactttcctaaagttgcgattttggcctcataagaaaaaa 2017038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 20112463 - 20112358
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaa-actacaaaactgctccctaagttttgcatttgtga 218  Q
    ||||||||| |||||||| ||  |||||||||  |||||||||||||| ||| || |||||||| |||||||||| || ||| ||||||||||| ||||     
T  20112463 ggcttaataacagttttagccttctaacttttccaaagttgcgattttggcccccaaagaaaaatactacaaaaccgcccccaaagttttgcatatgtgg 20112364  T
Q  219 cagttt 224  Q
    ||||||    
T  20112363 cagttt 20112358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 47999524 - 47999635
Alignment:
Q  114 aataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||| | ||||||||||||||| | || ||| ||||| |||||||||||||| ||| ||||||  ||||||||||||||| ||||| |||||||| ||    
T  47999524 aataaaagtttaatagcagttttaactcc-taattttttcaaagttgcgatttttgccccctaagaaaaaaaactacaaaaccgctccataagttttaca 47999622  T
Q  212 tttgtgacagttt 224  Q
    | |||| ||||||    
T  47999623 tctgtggcagttt 47999635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 1571390 - 1571469
Alignment:
Q  111 taaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaa 191  Q
    ||||||||||||||||||||||||||| | ||||||||||   |||||||||||||| ||| |||||  ||||||||||||    
T  1571390 taaaataaaggcttaatagcagttttaacaccctaactttacaaaagttgcgatttt-gccccctaaataaaaactacaaa 1571469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 54855303 - 54855398
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcat 212  Q
    ||||||||||||||||||| || ||||||||| | |||| |||||||||  |||| ||||  ||||||| |||||||||| || ||||||||||||    
T  54855303 aggcttaatagcagttttaaccacctaactttctcaaagctgcgattttgacctcataagaaaaaaaacgacaaaactgccccttaagttttgcat 54855398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 8965835 - 8965724
Alignment:
Q  107 aatataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagtt 206  Q
    |||||||||||  |||||||||||| ||||| |||| ||| ||||| |||||||||||||| |||  |||||||||| ||| ||||| || |||||||||    
T  8965835 aatataaaata--ggcttaatagcaattttaacccc-taattttttcaaagttgcgattttggcc--ctaagaaaaa-ctataaaaccgccccctaagtt 8965742  T
Q  207 ttgcatttgtgacagttt 224  Q
    |||||| |||| ||||||    
T  8965741 ttgcatctgtggcagttt 8965724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 14016722 - 14016831
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-------aaaaaactacaaaactgctccctaagttttgcattt 214  Q
    ||||||||| |||||| ||||||||||||   |||||||||||||| ||||||||||       ||||||||||||||| || || ||||||||| ||||    
T  14016722 cttaatagcggttttagccccctaactttcccaaagttgcgattttggcctcctaagaaaaaaaaaaaaactacaaaaccgccccttaagttttgtattt 14016821  T
Q  215 gtgacagttt 224  Q
    ||| ||||||    
T  14016822 gtggcagttt 14016831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 23759558 - 23759653
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||| ||||||  ||||||||||||  ||||||||||||||| ||| | |||| ||||||||||||||| |  |||||| |||||||    
T  23759558 aaaggcttaatagtagttttcgccccctaactttcataaagttgcgattttggccccttaagaaaaaaactacaaaaccgtcccctaaattttgca 23759653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 52463101 - 52462996
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||| |||||||| |||||||| ||||| |||||||||||||| | |  |||||||  ||||||||||||| || || |||||||||||| | ||    
T  52463101 ggcttaataacagttttagccccctaattttttcaaagttgcgattttgggcctctaagaaaaaaaactacaaaac-gccccttaagttttgcatctatg 52463003  T
Q  218 acagttt 224  Q
    |||||||    
T  52463002 acagttt 52462996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 2654283 - 2654177
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaa-actacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||| |||||||  |||||||||||   |||||||  ||||| | | ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  2654283 aggcttaatagtagttttaggcccctaactttcccaaagttgttattttggtcccctaaaaaaaatactacaaaactgccccctaagttttgcatatgtg 2654184  T
Q  218 acagttt 224  Q
     ||||||    
T  2654183 gcagttt 2654177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 6637373 - 6637271
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    ||||||||| ||||| |||  ||| ||||| |||||| ||||||||||| |||||||| ||||||||||||  || || |||||||||||||| || |||    
T  6637373 ttaatagcacttttagccctttaattttttcaaagtttcgattttagccccctaagaaaaaaactacaaaatcgccccttaagttttgcatttctggcag 6637274  T
Q  222 ttt 224  Q
    |||    
T  6637273 ttt 6637271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 16292268 - 16292374
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    |||| ||||||| | ||||| |||||||| |||||||||||||||||||| | | | ||| ||||||||||||||  || | ||||||||||||  ||||    
T  16292268 aaggtttaatagtaattttaaccccctaatttttttaaagttgcgattttggtcccttaaaaaaaaactacaaaatcgccctctaagttttgcacatgtg 16292367  T
Q  218 acagttt 224  Q
     ||||||    
T  16292368 gcagttt 16292374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 27978695 - 27978797
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    ||||||||||||| | ||| |||||||| | ||||||||||||||  || |||||| |||||| |||||||||||    ||||||||||||||||| |||    
T  27978695 ttaatagcagtttaagccctctaactttctcaaagttgcgattttgaccccctaagaaaaaaattacaaaactgccatataagttttgcatttgtggcag 27978794  T
Q  222 ttt 224  Q
    |||    
T  27978795 ttt 27978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 50769366 - 50769457
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagttttgcat 212  Q
    ||||||||||||||| ||||||||||||   ||||||||||||||  || ||||||   ||||||||||||||| || |||||||||||||||    
T  50769366 ttaatagcagttttatccccctaactttcccaaagttgcgattttgcccccctaagaaaaaaaaactacaaaaccgc-ccctaagttttgcat 50769457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 2181438 - 2181333
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa-aactacaaaactgctccctaagttttgcatttgtga 218  Q
    |||||||||||| ||||  | ||||||||||| | ||||||||||||| ||  | |||||||| |||||||||||||| | ||||||||||||  ||| |    
T  2181438 ggcttaatagcactttttgctccctaacttttatgaagttgcgattttggctccttaagaaaagaactacaaaactgccctctaagttttgcaactgtaa 2181339  T
Q  219 cagttt 224  Q
    ||||||    
T  2181338 cagttt 2181333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 8965525 - 8965626
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagt 222  Q
    ||||||| ||||||  |||||| ||||||   |||||| |||||||||| ||||| ||||||||||||||| || || |||||||||||  |||| ||||    
T  8965525 ttaatagaagttttcgcccccttacttttacgaagttgtgattttagccccctaaaaaaaaactacaaaaccgccccttaagttttgcaactgtgccagt 8965624  T
Q  223 tt 224  Q
    ||    
T  8965625 tt 8965626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 37831595 - 37831683
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa--ctacaaaactgctccctaagttttg 209  Q
    ||||||||||||||| |||||||| ||||   ||||||||||||| ||| ||||||||||||   |||||||| || ||||||||||||    
T  37831595 ttaatagcagttttagccccctaagttttaagaagttgcgattttggccccctaagaaaaaaacttacaaaaccgccccctaagttttg 37831683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 211
Target Start/End: Complemental strand, 50769680 - 50769584
Alignment:
Q  115 ataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||| ||||||| |||||||||  |||||||||||||   ||||||||||||| ||| ||||| ||||||||| ||||| ||   ||||||||||||    
T  50769680 ataagggcttaaaagcagttttcgccccctaacttttacgaagttgcgattttggccccctaaaaaaaaactataaaaccgcctactaagttttgca 50769584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 1186652 - 1186715
Alignment:
Q  114 aataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaa 177  Q
    |||||||||||||| ||| ||||  |||||||||||||| |||||||||||||| ||| |||||    
T  1186652 aataaaggcttaattgcacttttggccccctaactttttaaaagttgcgattttggccccctaa 1186715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 2180780 - 2180874
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||  |||||| ||||||||||||||  |  |||||| |||||||| ||||    
T  2180780 ttaatagcagttttaaccct-taactttttcaaagttgcgattttagctccctaagaaaaaaactacaaaatcgtcccctaaattttgcatctgtg 2180874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 21451457 - 21451532
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaaga-aaaaactacaaaa 192  Q
    |||||||||||||||||||| || ||||||||| | |||||||||||||| ||  ||| ||| |||||||||||||    
T  21451457 aaggcttaatagcagttttagcctcctaactttctcaaagttgcgatttttgctccctgagataaaaactacaaaa 21451532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 49185571 - 49185656
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaag 204  Q
    |||||||||||||||||| ||||||||| |||   ||||||||||||| ||| ||||||  ||||||||||||||| || |||||||    
T  49185571 ggcttaatagcagttttaaccccctaac-tttcccaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaag 49185656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 26089464 - 26089576
Alignment:
Q  109 tataaaataaa-ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttt 207  Q
    ||||||||||| || |||||||||||||||  ||| |||||||| ||||||||| ||||| |||    || ||||||||||||||| || || |||||||    
T  26089464 tataaaataaaaggtttaatagcagttttagtccc-taacttttataaagttgcaattttggccc---aaaaaaaaactacaaaacagccccttaagttt 26089559  T
Q  208 tgcatttgtgacagttt 224  Q
    | ||| |||||||||||    
T  26089560 tacatctgtgacagttt 26089576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 29697522 - 29697628
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    |||| |||||||||||||||  || ||||  || | |||||||||||||| |||||  |  |||||| |||||||| || ||||||||||||||| ||||    
T  29697522 aaggtttaatagcagttttagtcctctaaaattatcaaagttgcgattttggcctcaaacaaaaaaattacaaaaccgccccctaagttttgcatctgtg 29697621  T
Q  218 acagttt 224  Q
     ||||||    
T  29697622 gcagttt 29697628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 37833013 - 37832947
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    |||||||||||||||||||| || |||||||||  |||||||||||||||   | ||||||||||||    
T  37833013 aaggcttaatagcagttttagcctcctaactttcctaaagttgcgattttgaacccctaagaaaaaa 37832947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 4796035 - 4796100
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||||||| |||||  ||||||||||||| ||| |||||||||| |||  |||||||||||    
T  4796035 aggcttaatagcatttttagtcccctaactttttcaaaattgcgattttggccctctaagaaaaaa 4796100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 12719449 - 12719541
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||| ||||||||||||||  |||| ||| |||  |||| || ||||||| ||| ||||| |||||||||||||| ||| ||||||||||||||    
T  12719449 aaggtttaatagcagttttcgccccttaattttcataaatttacgattttggccccctaa-aaaaaactacaaaattgccccctaagttttgca 12719541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 212
Target Start/End: Original strand, 51371462 - 51371557
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcat 212  Q
    |||||||||||||||||||| |||| ||||||| || |||||| |||||| | | | ||||  |||||||||||||| ||| || ||||||||||||    
T  51371462 aaggcttaatagcagttttaaccccttaactttcttgaagttgtgatttt-gacccttaagaaaaaaaactacaaaattgccccttaagttttgcat 51371557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 13826327 - 13826263
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||| |||||||| |||| ||| ||||  |||||||||||||| || |||||||||||||    
T  13826327 ggcttaataacagttttaaccccttaagttttaaaaagttgcgattttcgcttcctaagaaaaaa 13826263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 210
Target Start/End: Original strand, 35383763 - 35383853
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgc 210  Q
    |||||||||||||||||||  ||||||||||||    |||||| |||||| ||| ||||| ||||||||||||||  || |||||||||||||    
T  35383763 aaggcttaatagcagttttcgccccctaactttcacgaagttgtgattttggccccctaa-aaaaaactacaaaatcgc-ccctaagttttgc 35383853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 35392662 - 35392721
Alignment:
Q  164 ttttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||| ||||||||| |||||| ||||||||||| ||||||||||||||  |||||||||||    
T  35392662 ttttcgcctcctaa-aaaaaattacaaaactgccccctaagttttgcacctgtgacagttt 35392721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 42525965 - 42526057
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct-aagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||| ||||| | |||||| |||||||||||||| ||||| ||| | | || ||||||||||||||| || || | |||||||||    
T  42525965 ggcttaatagcaattttagctccctaatttttttaaagttgcaattttggccccttaaaaaaaaaactacaaaaccgccccattagttttgca 42526057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 49185870 - 49185780
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||  ||||| ||||||   |||||||||||||| ||| ||||||||  ||||||||||||| || || |||||||||||    
T  49185870 cttaatagcagttttcaccccc-aactttcacaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccttaagttttgca 49185780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 6207176 - 6207266
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagtttt 208  Q
    |||||||||||||||||  | ||||||||||    |||||| |||||| | ||||||||||||  |||||||||||||| || ||||||||    
T  6207176 ggcttaatagcagttttcgctccctaactttagcgaagttgtgattttggactcctaagaaaaaaaactacaaaactgccccataagtttt 6207266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 8070630 - 8070704
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgc 196  Q
    |||||||||||||||| |||||||||||||  |||||||| | ||| ||| |||||| |||||| |||||||||||    
T  8070630 cttaatagcagttttaaccccctaacttttccaaagttgcaactttggcc-cctaagaaaaaaattacaaaactgc 8070704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 52865812 - 52865750
Alignment:
Q  164 ttttagcctcctaagaaaaaa--ctacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||||||||||||||||  ||||||||  || ||||||||||||| | |||||||||||    
T  52865812 ttttagcctcctaagaaaaaaaactacaaaagcgcaccctaagttttgcctctgtgacagttt 52865750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 21451725 - 21451671
Alignment:
Q  154 aaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagtttt 208  Q
    ||||||||| |||| ||| ||||||||||||||| ||||| | ||||||||||||    
T  21451725 aaagttgcgcttttggccccctaagaaaaaactataaaaccgttccctaagtttt 21451671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 34567936 - 34567854
Alignment:
Q  110 ataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaa 192  Q
    ||||||| |||||||||||  | ||||| ||| ||||||||||  |||| |||||||||| |  |||||||||| ||||||||    
T  34567936 ataaaattaaggcttaataataattttaaccctctaactttttcgaagtcgcgattttagtcctctaagaaaaatctacaaaa 34567854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 21322964 - 21322919
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    ||||||||| ||||||||  |||||||||||||| |||||||||||    
T  21322964 aaaaaactataaaactgcctcctaagttttgcatatgtgacagttt 21322919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 35393984 - 35393892
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttg 209  Q
    ||||||||||||||||||  ||||||||||||    ||||||||||||| | |  |||||  ||||||||||||||| || ||||| ||||||    
T  35393984 aggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggacctctaagaaaaaaaactacaaaaccgccccctaggttttg 35393892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 11983454 - 11983525
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    |||| ||||| ||||||| |||||||  ||| ||| ||||| |||||||||||||| ||| ||||||||||||    
T  11983454 aaaaaaaaggtttaatagtagttttagtcccttaattttttcaaagttgcgattttggcc-cctaagaaaaaa 11983525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 21322768 - 21322800
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||||| |||||||||||    
T  21322768 aaaaaactacaaaactgctccttaagttttgca 21322800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 29697837 - 29697743
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||||  || |||||||||  | ||||||||||||| | | ||||||  ||||||||||||| | |  ||||||||||||||    
T  29697837 aaggcttaatagcagttttcacctcctaactttcatgaagttgcgattttggtc-cctaagaaaaaaaactacaaacccgtcccctaagttttgca 29697743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 31553558 - 31553510
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    ||||||||||||||||| |  ||| | ||||||||||||||||||||||    
T  31553558 aggcttaatagcagtttgaggcccatcacttttttaaagttgcgatttt 31553510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 53312602 - 53312522
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgc 196  Q
    |||||||||||| |||||||  ||||||||||||    |||||||||||||  ||  ||||| ||||||||||||||||||    
T  53312602 aaaggcttaataacagttttcaccccctaactttcacgaagttgcgattttgacccactaagaaaaaaactacaaaactgc 53312522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 6036971 - 6036868
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgcatttgtgac 219  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||| |||||||||||| |||||||||||||||  ||||||||||||||| |||| |    
T  6036971 gcttaatagcagttttagcccc-taacttttctaaagttgcgattttggcctcctaagaagaaaactacaaaactgtcccctaagttttgcatatgtggc 6036873  T
Q  220 agttt 224  Q
    |||||    
T  6036872 agttt 6036868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 10727509 - 10727402
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||| |||||||||||||| |||||||||||||  ||||||| |||||| ||| ||||||||  ||||||||||||| || ||||||||||||||| |||    
T  10727509 aggcataatagcagttttagccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatctgt 10727410  T
Q  217 gacagttt 224  Q
    | ||||||    
T  10727409 ggcagttt 10727402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 2203467 - 2203373
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||||| | || ||||||||| |||||||||| |||  |  ||||| ||||||||| |||||||| ||||||||||||||    
T  2203467 aaaggcttaatagcagttttaactccttaactttttcaaagttgcgactttgacgccctaaaaaaaaactataaaactgccccctaagttttgca 2203373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 33399785 - 33399890
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa-aactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||||||||||| |||| ||||||||  |||||||||||||| |||  ||||||||| ||||||||||| |  ||||||||||| ||||||||    
T  33399785 aggcttaatagcagttttagcccc-taacttttccaaagttgcgattttggccctctaagaaaaaaactacaaaaccggaccctaagttttacatttgtg 33399883  T
Q  218 acagttt 224  Q
     ||||||    
T  33399884 gcagttt 33399890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 33401367 - 33401276
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||  |||||||||||||   ||||| ||||||| ||  ||||| |||||||||||||||||  ||||||||||||||    
T  33401367 ggcttaatagcagttttcaccccctaacttttacgaagttacgattttggctccctaaaaaaaaactacaaaactgtcccctaagttttgca 33401276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 2853731 - 2853623
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttag-cctcctaag--aaaaaactacaaaactgctccctaagttttgcatttg 215  Q
    ||||||||||||||||||| || ||||||||| | |||||||| ||||| | || ||||||  ||||||||||||||| || ||||||||||| ||| ||    
T  2853731 aggcttaatagcagttttaacctcctaactttctcaaagttgcaattttggcccccctaagaaaaaaaactacaaaaccgccccctaagtttttcatatg 2853632  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  2853631 tggcagttt 2853623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 221
Target Start/End: Original strand, 26601464 - 26601563
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgtgaca 220  Q
    |||||| |||||||| | || |||||||||||||||||||||||| ||| ||||||  |||||| ||||||||  | ||||||||||||||| |||||||    
T  26601464 ttaataacagttttatctccttaacttttttaaagttgcgattttggcc-cctaagaaaaaaaattacaaaaccaccccctaagttttgcatctgtgaca 26601562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 30349347 - 30349447
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgatttt-agcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttg 215  Q
    |||||||||||||||||||| ||| ||||||||   |||||||||||||| |||| |||||| ||||||||||||||| || || |||||||||||| ||    
T  30349347 aaggcttaatagcagttttagccctctaactttcccaaagttgcgattttgagcc-cctaagaaaaaaactacaaaaccgccccttaagttttgcatctg 30349445  T
Q  216 tg 217  Q
    ||    
T  30349446 tg 30349447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 30349671 - 30349606
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||||||||||||   ||||||||||||| |||||||||||||| ||| ||||||||||||    
T  30349671 aggcttaatagcagtttttgtcccctaactttttcaaagttgcgattttggccccctaagaaaaaa 30349606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 5003389 - 5003287
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagttttgcatttgtgaca 220  Q
    |||||||| ||||||||||  |||||||   ||||||||||||||||| |||||||||  ||||| |||||| ||| |||||||||||||| ||||| ||    
T  5003389 ttaatagcggttttacccct-taactttcccaaagttgcgattttagcttcctaagaaaaaaaacaacaaaattgccccctaagttttgcaattgtggca 5003291  T
Q  221 gttt 224  Q
    ||||    
T  5003290 gttt 5003287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 17248636 - 17248742
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgatttt-agcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||||||||||| || |||||||||||||||||||||||||| | ||| |||||  |||||||  |||||| || | ||||||||||||| ||     
T  17248636 ggcttaatagcagttttagcctcctaacttttttaaagttgcgattttgatcct-ctaagaaaaaaaacctcaaaaccgccctctaagttttgcatctgc 17248734  T
Q  217 gacagttt 224  Q
    ||||||||    
T  17248735 gacagttt 17248742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 1377530 - 1377416
Alignment:
Q  110 ataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa-ctacaaaactgctccctaagtttt 208  Q
    |||||| ||||| |||||| |||||||   |||||||||||    ||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||    
T  1377530 ataaaaaaaaggtttaatatcagttttcgtcccctaactttcacgaagttgcgattttggcc-cctaagaaaaaaactacaaaactgttccctaagtttt 1377432  T
Q  209 gcatttgtgacagttt 224  Q
    |||  ||| |||||||    
T  1377431 gcaactgtaacagttt 1377416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 1385278 - 1385164
Alignment:
Q  110 ataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa-ctacaaaactgctccctaagtttt 208  Q
    |||||| ||||| |||||| |||||||   |||||||||||    ||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||    
T  1385278 ataaaaaaaaggtttaatatcagttttcgtcccctaactttcacgaagttgcgattttggcc-cctaagaaaaaaactacaaaactgttccctaagtttt 1385180  T
Q  209 gcatttgtgacagttt 224  Q
    |||  ||| |||||||    
T  1385179 gcaactgtaacagttt 1385164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 2841128 - 2841016
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-------aaaaaactacaaaactgctccctaagttttgc 210  Q
    ||||||||||||||||||||  ||||||||||||| ||| ||||| ||||| |||||||||       ||||||||||||||| |  || ||||||||||    
T  2841128 aaggcttaatagcagttttagacccctaactttttcaaaattgcgctttta-cctcctaagaagaaaaaaaaaactacaaaacagtcccataagttttgc 2841030  T
Q  211 atttgtgacagttt 224  Q
    ||||||| ||||||    
T  2841029 atttgtggcagttt 2841016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 18031260 - 18031150
Alignment:
Q  113 aaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcat 212  Q
    ||||||||| ||||||| ||||||| |||| |||||||||||||||||  ||||| | |   ||||||||||||||||||| |  || ||||||||| ||    
T  18031260 aaataaaggtttaatagtagttttaacccc-taacttttttaaagttggaattttggtcctttaagaaaaaactacaaaaccgtcccttaagttttgtat 18031162  T
Q  213 ttgtgacagttt 224  Q
    |||||| |||||    
T  18031161 ttgtgatagttt 18031150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 20475014 - 20474913
Alignment:
Q  124 taatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||   | | ||||  ||||||||||||||| || ||||||||||||||| |||| |||    
T  20475014 taatagcaattttagccccctaactttttcaaagttgcgattttgatcccttaagaaaaaaaactacaaaac-gccccctaagttttgcatctgtggcag 20474916  T
Q  222 ttt 224  Q
    |||    
T  20474915 ttt 20474913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 12766530 - 12766436
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct-aagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||||  ||||||||||||    ||||||||||||| ||| ||| || ||||||||||||||| || || |||||||||||    
T  12766530 aaggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggccccctaaaaaaaaaactacaaaaccgccccttaagttttgca 12766436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 2853435 - 2853520
Alignment:
Q  127 tagcagtttt-acccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||| |||||| |||||||    ||||||||||||| ||| ||||||||||||||||||||| |  ||||||||||||||    
T  2853435 tagcagttttcacccccataactttcacgaagttgcgattttcgccccctaagaaaaaactacaaaaccgtcccctaagttttgca 2853520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 8224053 - 8223941
Alignment:
Q  111 taaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgc 210  Q
    ||||| ||||||||||||||||||||  ||   |||||||| |||||||||||||||   | ||||| ||||||||||||||| |  |||||||||||||    
T  8224053 taaaaaaaaggcttaatagcagttttgacctattaacttttctaaagttgcgattttgatcccctaa-aaaaaactacaaaaccgtcccctaagttttgc 8223955  T
Q  211 atttgtgacagttt 224  Q
    |  | |||||||||    
T  8223954 acctctgacagttt 8223941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 3812739 - 3812846
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||||||| | | ||||||||  |||||||| ||||||    |||||||||||  ||||||||||  | |||||||||||||||| |||    
T  3812739 aggcttaatagcagttttaactctctaactttcctaaagttgtgattttgatttcctaagaaaaaaaactacaaaagagttccctaagttttgcatatgt 3812838  T
Q  217 gacagttt 224  Q
    | ||||||    
T  3812839 ggcagttt 3812846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 10727189 - 10727283
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||  || |||||||||    |||||| |||||| | ||||||||||||  |||||||||||||| | ||||||||||||    
T  10727189 aggcttaatagcagttttcgcctcctaactttagcgaagttgtgattttggactcctaagaaaaaaaactacaaaactgccctctaagttttgca 10727283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 238929 - 239020
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||  |||||||| |||    |||||||||||||  |||||||| ||||||||||||||  |  ||||||||||||||    
T  238929 aggcttaatagcagttttcgccccctaattttcacgaagttgcgattttgacctcctaa-aaaaaactacaaaatcgtcccctaagttttgca 239020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 2203186 - 2203250
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaa 183  Q
    ||||||||||||| ||||| | ||||||||||   |||||||||||||| ||||||||| |||||    
T  2203186 aggcttaatagcaattttagctccctaactttcccaaagttgcgattttggcctcctaaaaaaaa 2203250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 18030944 - 18031026
Alignment:
Q  127 tagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||  ||||||||||||    ||||||||||||| ||||||||| ||||||||||||||  || ||||||||||||||    
T  18030944 tagcagttttctccccctaactttcacgaagttgcgattttggcctcctaa-aaaaaactacaaaatcgc-ccctaagttttgca 18031026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 239256 - 239213
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattt 166  Q
    ||||||||||||||| |||||||||||| | |||||||||||||    
T  239256 ttaatagcagttttaaccccctaactttctcaaagttgcgattt 239213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 266122 - 266214
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||| ||||| ||||||   |||| ||| ||||| ||| ||||||||||  |||||||||| ||| || |||||||||||    
T  266122 ggcttaatagcagttttagcccccaaactttcccaaagctgcaattttggcc-cctaagaaaaataactacaaaattgccccttaagttttgca 266214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 26311713 - 26311612
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgac 219  Q
    ||||||||  |||||||| |||||||| |||  ||||||||| ||||||| | |||||   |||||||||||||  | || |||||||||||| |||| |    
T  26311713 ggcttaatgacagttttagccccctaattttcctaaagttgcaattttagacccctaa---aaaactacaaaaccaccccttaagttttgcatatgtggc 26311617  T
Q  220 agttt 224  Q
    |||||    
T  26311616 agttt 26311612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 3579594 - 3579687
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa-aactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||   ||| |||||||    ||||||||||||| ||| | ||| |||| ||||||||||| || ||||||||||||||    
T  3579594 aggcttaatagcagttttcgtcccttaactttcacgaagttgcgattttggccccgtaaaaaaaaaactacaaaaccgccccctaagttttgca 3579687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 216
Target Start/End: Complemental strand, 17248963 - 17248858
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagtttt 208  Q
    ||||||||| ||||||||||||| | | ||||||||||||   ||||||||||||| ||| | ||||   ||||||||||||||| | |||| |||||||    
T  17248963 aaaataaagacttaatagcagttgt-cgcccctaacttttaggaagttgcgattttggccccataagaaaaaaaaactacaaaaccg-tccccaagtttt 17248866  T
Q  209 gcatttgt 216  Q
    ||| ||||    
T  17248865 gcaattgt 17248858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 5003089 - 5003153
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||| |||||||  |||||||||||||   |||||||||||||  | |||||||||||||    
T  5003089 ggcttaataacagttttcgccccctaacttttaagaagttgcgattttgacttcctaagaaaaaa 5003153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 18604101 - 18604196
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgc 210  Q
    |||||||||||| || ||||| | |||||| ||||   ||||||||||||| ||||  ||||  ||||||||||||||| || ||| |||||||||    
T  18604101 aaaggcttaatatcatttttagctccctaagttttaagaagttgcgattttcgccttttaagaaaaaaaactacaaaaccgcccccaaagttttgc 18604196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 23584995 - 23585059
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    |||||||| |||||||||  | | ||| ||||||||||||| |||||| | ||||||||||||||    
T  23584995 ggcttaattgcagttttaatctcttaatttttttaaagttgtgattttggactcctaagaaaaaa 23585059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 32143555 - 32143472
Alignment:
Q  130 cagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgca 211  Q
    |||||||  ||||||||||||| | |||||||||||||  ||  |||||||||  |||||||||| ||| | ||||||||||||    
T  32143555 cagttttcaccccctaacttttatgaagttgcgattttgaccctctaagaaaaataactacaaaattgccctctaagttttgca 32143472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 5470650 - 5470545
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtga 218  Q
    |||||| |||||||||||| ||||||||||||  ||||||||||||||| ||| ||||| ||||||||||||||| || || |||||||| ||| ||||     
T  5470650 aggctttatagcagttttagccccctaactttcctaaagttgcgattttggccccctaaaaaaaaactacaaaaccgccccttaagttttacatctgtgg 5470551  T
Q  219 cagttt 224  Q
    ||||||    
T  5470550 cagttt 5470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 25375188 - 25375111
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgc 196  Q
    ||||||||||||||||||| |||||||| ||||| || ||||||||||| ||| ||||||||||||||||||||||||    
T  25375188 aggcttaatagcagttttagccccctaattttttcaatgttgcgattttggccccctaagaaaaaactacaaaactgc 25375111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 44618060 - 44617947
Alignment:
Q  111 taaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgc 210  Q
    |||||| |||||||||||||||||||| ||| ||||||||    ||||||||||||| | | | |||||||||| |||||||| || |||||||||||||    
T  44618060 taaaatcaaggcttaatagcagttttaaccctctaactttcaagaagttgcgattttggtcccttaagaaaaaattacaaaaccgccccctaagttttgc 44617961  T
Q  211 atttgtgacagttt 224  Q
    ||||||| ||||||    
T  44617960 atttgtggcagttt 44617947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 43028791 - 43028899
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcattt 214  Q
    ||||||||||||||||||||| ||||||||||| |  |||||||||||||| ||| ||||||  |||||||||||||||  | ||||||||||||||| |    
T  43028791 aaaggcttaatagcagttttagccccctaacttctccaaagttgcgattttggccccctaagaaaaaaaactacaaaac-cccccctaagttttgcatct 43028889  T
Q  215 gtgacagttt 224  Q
    ||| ||||||    
T  43028890 gtggcagttt 43028899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 44297562 - 44297652
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttg 209  Q
    ||||||||||||| ||||| || ||||| ||||  |||||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||    
T  44297562 aggcttaatagcacttttagcctcctaatttttcaaaagttgcgattttggccccctaaaaaaaaactacaaaactgccccctaagttttg 44297652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 34679095 - 34679203
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactg-ctccctaagttttgcatttg 215  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||| ||| |||||| |||||| |||||||| | | ||||||||||||||  ||    
T  34679095 aaggcttaatagcagttttagccccctaacttttccaaagttgcgattttggccacctaagaaaaaaattacaaaaccgcccccctaagttttgcacatg 34679194  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  34679195 tggcagttt 34679203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 15022838 - 15022943
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    |||||||||||||||||| |||||||||||||  ||||||| |||||| || ||| |||  ||||||||||||||| || |||||| |||||||||||||    
T  15022838 ggcttaatagcagttttagccccctaacttttcgaaagttgtgattttggcatccgaagaaaaaaaactacaaaaccgc-ccctaaattttgcatttgtg 15022936  T
Q  218 acagttt 224  Q
     ||||||    
T  15022937 gcagttt 15022943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 14489205 - 14489319
Alignment:
Q  111 taaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttg 209  Q
    ||||||||||||||||||||||||||| ||| ||||||||   ||||||| |||||| ||| | |||| |||||| |||||||| || ||||||||||||    
T  14489205 taaaataaaggcttaatagcagttttagccctctaactttccaaaagttgtgattttggccccttaagaaaaaaattacaaaaccgccccctaagttttg 14489304  T
Q  210 catttgtgacagttt 224  Q
    ||  |||| ||||||    
T  14489305 cacctgtggcagttt 14489319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 36715609 - 36715504
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcct--aagaaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| | |  ||  || |||||| |||||||   | |||||||||||||||||||    
T  36715609 aggcttaatagcagttttagctccctaacttttttaaagttgcgattttggtcctctaaaaaaaaaaaatacaaaatctccccctaagttttgcatttgt 36715510  T
Q  217 gacagt 222  Q
    | ||||    
T  36715509 ggcagt 36715504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 6592715 - 6592784
Alignment:
Q  111 taaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa 180  Q
    ||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  || ||||||||    
T  6592715 taaaatataggcttaatagcagttttagccccctaacttttccaaagttgcgattttgaccccctaagaa 6592784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 27489716 - 27489657
Alignment:
Q  155 aagttgcgattttagcctcctaagaaaaaa---ctacaaaactgctccctaagttttgca 211  Q
    ||||||||||||| ||||||||||||||||   |||||||||||||||||||||||||||    
T  27489716 aagttgcgattttggcctcctaagaaaaaaaaactacaaaactgctccctaagttttgca 27489657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 4576854 - 4576751
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgac 219  Q
    ||||||||||||||||||  |||||||||||   |||||||||||||| ||| | ||| |||||||||||||| ||  || |||||||||| || |||||    
T  4576854 ggcttaatagcagttttagacccctaactttcc-aaagttgcgattttggccccttaataaaaaactacaaaattgtcccttaagttttgcgttcgtgac 4576756  T
Q  220 agttt 224  Q
    |||||    
T  4576755 agttt 4576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 6593011 - 6592955
Alignment:
Q  155 aagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||    
T  6593011 aagttgcgattttagcccccttaaaaaaaactacaaaactgccccctaagttttgca 6592955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 39918434 - 39918498
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    |||||||||| ||||||| |||||||||||| | |||||||||||||| ||| ||||||||||||    
T  39918434 ggcttaatagtagttttagccccctaactttctcaaagttgcgattttggccccctaagaaaaaa 39918498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 14943860 - 14943766
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||||||||| |||| ||||||||  ||||||| |||||| | || ||||| ||||||||||||||| || | ||||||||||||    
T  14943860 aaaggcttaatagcagttttagccccttaacttttccaaagttgtgattttggtct-ctaagaaaaaaactacaaaaccgccctctaagttttgca 14943766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 34679404 - 34679314
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||  ||||||||||||    |||||| |||||| ||| ||||| ||||||||||||||| || ||||||||||||||    
T  34679404 ggcttaatagcagtttttgccccctaactttcacgaagttgtgattttggccccctaa-aaaaaactacaaaaccgccccctaagttttgca 34679314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 21358421 - 21358355
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    |||||||||||||||||||  |||||||||||| | ||||||| |||||| ||| ||||||||||||    
T  21358421 aaggcttaatagcagtttttgccccctaactttctcaaagttgtgattttggccccctaagaaaaaa 21358355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 36176981 - 36177070
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgc 210  Q
    |||||||||||||||||| ||| |||| |||    ||||||||||||||||| ||||| |||||||||||||||  | |||||||||||||    
T  36176981 ggcttaatagcagttttagccctctaagtttcacgaagttgcgattttagccccctaa-aaaaaactacaaaaccaccccctaagttttgc 36177070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 37431853 - 37431759
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgca 211  Q
    |||| ||||||||||||||  |||||||||||     ||||||||||||| |||||||||||| ||||||||||||| || || |||||||||||    
T  37431853 aaggtttaatagcagttttcgccccctaacttccacgaagttgcgattttggcctcctaagaaaaaaactacaaaaccgccccttaagttttgca 37431759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 6510310 - 6510221
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa-ctacaaaactgctccctaagttttgca 211  Q
    ||||||||||||||  ||| ||||||||  | ||||||||||||| ||  |||||||||||| ||||||||| || ||||||||||||||    
T  6510310 ttaatagcagttttcgccctctaactttcatgaagttgcgattttggcaccctaagaaaaaagctacaaaaccgccccctaagttttgca 6510221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 19206141 - 19206230
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagtttt 208  Q
    ||||||||||||| ||||  |||||||| |||   |||||||||||||| ||| ||||| |||||||||||||||  | |||||||||||    
T  19206141 aggcttaatagcaattttcgccccctaattttcacaaagttgcgattttggccccctaaaaaaaaactacaaaaccaccccctaagtttt 19206230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 24472759 - 24472655
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||||||||||||   |||||| ||||  ||||||| |||||||||| ||||||  |||||||||||||||  | ||||||||||||||| |||    
T  24472759 aggcttaatagcagttttagaaccctaatttttccaaagttgtgattttagcc-cctaagaaaaaaaactacaaaac--ccccctaagttttgcatctgt 24472663  T
Q  217 gacagttt 224  Q
    | ||||||    
T  24472662 ggcagttt 24472655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 6510007 - 6510106
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    |||||||||||||||| ||| ||||||||  |||| |||| ||||| |||||||   |||||| |||||||| || |||||| |||||||| |||| |||    
T  6510007 cttaatagcagttttagcccactaactttcctaaaattgcaattttggcctcct---aaaaaattacaaaaccgccccctaatttttgcatatgtggcag 6510103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 16043085 - 16043191
Alignment:
Q  116 taaaggcttaatagcagttttacccccctaactttttt-aaagttgcgattttagcctcctaagaaaa--aactacaaaactgctccctaagttttgcat 212  Q
    ||||||||||||| |||||||| |||| |||||||||  ||||||||| |||| ||| ||||||||||  ||||||||||| |  |||||  ||||||||    
T  16043085 taaaggcttaataacagttttatcccc-taactttttccaaagttgcggttttggccccctaagaaaaaaaactacaaaaccgtcccctatcttttgcat 16043183  T
Q  213 ttgtgaca 220  Q
    ||||||||    
T  16043184 ttgtgaca 16043191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 19399490 - 19399442
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  19399490 aggcttaatagcagttttagccccctaactttttcaaagttgtgatttt 19399442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 25092330 - 25092401
Alignment:
Q  152 ttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||||||||||||||| ||||||||||||||| ||||| | | ||||| |||||||| |||||| ||||    
T  25092330 ttaaagttgcgattttagccccctaagaaaaaactagaaaaccgtttcctaa-ttttgcatctgtgaccgttt 25092401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 224
Target Start/End: Original strand, 27489447 - 27489538
Alignment:
Q  133 ttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    ||||| || ||||||||| |||||||||||||||| ||| |||||| |||||||||||||| | | |||||| |||||||| |||| ||||||    
T  27489447 ttttagcctcctaactttcttaaagttgcgatttttgcc-cctaagaaaaaaactacaaaattaccccctaacttttgcatctgtggcagttt 27489538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 31827524 - 31827631
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaa--actacaaaactgctccctaagttttgcatttgt 216  Q
    ||||||||||||||||||| | |||||||||||  ||||||| ||||||  || |||||||||||  |||||||||   | ||||||| ||||||| |||    
T  31827524 aggcttaatagcagttttaactccctaacttttccaaagttgtgattttgcccccctaagaaaaaagactacaaaatcaccccctaagctttgcatctgt 31827623  T
Q  217 gacagttt 224  Q
    | ||||||    
T  31827624 gccagttt 31827631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 37803118 - 37803229
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgatttta----gcctcctaagaaaa---aactacaaaactgctccctaagttttgcat 212  Q
    ||||||||||||||||||  | ||||||||| | |||||||||||||||    ||| | ||||||||   ||||||||||| ||  ||||||||||||||    
T  37803118 ggcttaatagcagttttagtctcctaactttctcaaagttgcgattttaattagccccttaagaaaaaaaaactacaaaaccgcctcctaagttttgcat 37803217  T
Q  213 ttgtgacagttt 224  Q
    ||||| ||||||    
T  37803218 ttgtggcagttt 37803229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 31827845 - 31827754
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||| ||||  |||||||||||||   ||||||||||| |  ||||||||||||||| |||||||   | ||||||||||||||    
T  31827845 ggcttaatagcaattttcgccccctaacttttacgaagttgcgattatgacctcctaagaaaaaaatacaaaatcaccccctaagttttgca 31827754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 2609399 - 2609297
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaa-aaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    ||||||||||||||| | |  ||||||||| |||||||||||||| | | |||||||| ||||||||||||  || || |||||||| ||| |||| |||    
T  2609399 ttaatagcagttttaactcaataactttttcaaagttgcgattttggtcccctaagaaaaaaactacaaaatcgccccataagttttacatatgtggcag 2609300  T
Q  222 ttt 224  Q
    |||    
T  2609299 ttt 2609297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 4576537 - 4576607
Alignment:
Q  114 aataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    |||||| | ||||||||||||||| || ||||||||||| |||||||  ||||| ||| ||||||||||||    
T  4576537 aataaatgtttaatagcagttttagcctcctaactttttcaaagttgtcattttggccccctaagaaaaaa 4576607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 14489525 - 14489420
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtg 217  Q
    ||||||||||||||||||  ||||||||||||    ||||||||||||| ||| |||||| ||||||||||||||   | ||||||||||||||  ||||    
T  14489525 aggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggcc-cctaagaaaaaaactacaaaatcaccccctaagttttgcaactgtg 14489427  T
Q  218 acagttt 224  Q
     ||||||    
T  14489426 gcagttt 14489420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 24498106 - 24498174
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaa 190  Q
    ||||||||||||||||||  ||||||| ||||| ||||||| |||||||||| ||||| ||||||||||||    
T  24498106 ggcttaatagcagtttta-gcccctaattttttcaaagttgtgattttagccccctaa-aaaaaactacaa 24498174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 18709565 - 18709476
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||| |||| ||||| |  ||||||||||||||||||||   ||||||| ||||| ||||||| |  |||| |||||||||||    
T  18709565 cttaatagcagctttagcccccaattttttttaaagttgcgattttgatctcctaaaaaaaacctacaaagccactccttaagttttgca 18709476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 19889543 - 19889474
Alignment:
Q  108 atataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaa 177  Q
    |||||||||||||||||||| ||| ||||  |||| || |||||  |||||||||||||| |||||||||    
T  19889543 atataaaataaaggcttaattgcacttttggccccatatcttttcaaaagttgcgattttggcctcctaa 19889474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 24306331 - 24306270
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    |||||||||  |||| |||||||| ||||| |||||||||||||||||||| || |||||||    
T  24306331 ttaatagcatatttaaccccctaattttttcaaagttgcgattttagcctcttatgaaaaaa 24306270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 18709247 - 18709337
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    |||||||||||||||||   |||||||||||    ||||| ||||||| ||||||||| ||||||||||||||   | ||||||||||||||    
T  18709247 ggcttaatagcagttttcgtcccctaactttcacgaagtttcgattttggcctcctaa-aaaaaactacaaaatcaccccctaagttttgca 18709337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 224
Target Start/End: Original strand, 25333493 - 25333604
Alignment:
Q  114 aataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcat 212  Q
    |||| |||||||||| || ||||| |||| ||||||||  |||||||||||||| | | | |||| ||||||||| |||||  | ||||||||||||||     
T  25333493 aatataggcttaataacaattttaaccccttaacttttccaaagttgcgattttggtcccttaagaaaaaaactataaaaccaccccctaagttttgcac 25333592  T
Q  213 ttgtgacagttt 224  Q
     |||| ||||||    
T  25333593 ctgtggcagttt 25333604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 15023152 - 15023062
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttg 209  Q
    |||||||||||||||||  ||||||||||||    |||||| ||||||  || |||||| ||||||||||||||| |  ||||||||||||    
T  15023152 ggcttaatagcagttttggccccctaactttcaagaagttgtgattttgaccccctaagaaaaaaactacaaaaccgtcccctaagttttg 15023062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 5362491 - 5362446
Alignment:
Q  122 cttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    ||||||||||||||||  |||||||||||| |||||||| ||||||    
T  5362491 cttaatagcagttttaatcccctaacttttctaaagttgtgatttt 5362446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 5470388 - 5470425
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  5470388 aaaaaactacaaaactgccccctaagttttgcaattgt 5470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 21361879 - 21361986
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttg 215  Q
    |||||||||||||| ||||  |||| ||||||| | |||||||||||||| ||| | ||||  ||||||||||||||   | ||||||||||||||  ||    
T  21361879 aaggcttaatagcaatttttgcccc-taactttatcaaagttgcgattttggccccttaagaaaaaaaactacaaaaacaccccctaagttttgcacatg 21361977  T
Q  216 tgacagttt 224  Q
    || ||||||    
T  21361978 tggcagttt 21361986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 25411586 - 25411647
Alignment:
Q  164 ttttagcctcctaagaaaaaac-tacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||| ||||||||||||  |||||||| || ||||||||||||||| |||| ||||||    
T  25411586 ttttagccccctaagaaaaaaagtacaaaaccgccccctaagttttgcatctgtggcagttt 25411647  T

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Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 32013374 - 32013281
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||| |||||||| | |||||||||||| ||||||| |||||    |||  |||||||||||| |||| ||   |||||||||||||    
T  32013374 aaggcttaataacagttttaactccctaactttttaaaagttgtgatttggttctctaaagaaaaaactataaaattgtctcctaagttttgca 32013281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 34760908 - 34760953
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    ||||||||||||||| || ||||||||||||||| |||| ||||||    
T  34760908 aaaaaactacaaaaccgccccctaagttttgcatatgtggcagttt 34760953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 43029074 - 43029018
Alignment:
Q  154 aaagttgcgattttagcctcctaagaa--aaaactacaaaactgctccctaagtttt 208  Q
    |||||||||||||| ||| ||||||||  ||||||||||||| || |||||||||||    
T  43029074 aaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagtttt 43029018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 4925722 - 4925668
Alignment:
Q  155 aagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgca 211  Q
    ||||||||||||| ||||||||| ||||||||||||||  || ||||||||||||||    
T  4925722 aagttgcgattttggcctcctaa-aaaaaactacaaaatcgc-ccctaagttttgca 4925668  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 19399177 - 19399229
Alignment:
Q  115 ataaaggcttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    ||||| ||||||||||| ||||| || ||||||||| | ||||||||||||||    
T  19399177 ataaatgcttaatagcaattttagcctcctaactttctcaaagttgcgatttt 19399229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 36177407 - 36177298
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa---ctacaaaactgctccctaagttttgcatt 213  Q
    |||||||||||| |||||||| |||| ||| |||    ||||||||||||| ||| ||||||||||||   |||||||||| | ||| ||||||||   |    
T  36177407 aaaggcttaataacagttttagccccttaagtttcaagaagttgcgattttggcc-cctaagaaaaaataactacaaaacttcccccaaagttttgacct 36177309  T
Q  214 tgtgacagttt 224  Q
    |||||||||||    
T  36177308 tgtgacagttt 36177298  T

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Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 37803446 - 37803382
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||| || ||||  |||||||||||||   |||||||||||||  |||||||||||||||    
T  37803446 ggcttaataacaattttcgccccctaacttttacgaagttgcgattttgacctcctaagaaaaaa 37803382  T

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Target: scaffold0062 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 46068 - 46169
Alignment:
Q  112 aaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaa--aaactacaaaactgctccctaagttttg 209  Q
    ||||||||||||| |||||||||||  ||||||||||||    |||||||||||||| || |||||||||  |||||||||||| || ||||||||||||    
T  46068 aaaataaaggctttatagcagttttcgccccctaactttcacgaagttgcgattttaaccccctaagaaaagaaactacaaaaccgccccctaagttttg 46167  T
Q  210 ca 211  Q
    ||    
T  46168 ca 46169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 46392 - 46283
Alignment:
Q  120 ggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-----aaaaaactacaaaactgctccctaagttttgcattt 214  Q
    |||||||||||||||||| | || |||||||| ||||||| | ||||| ||||||||||     |||||| ||||||||||| | ||||||||||||| |    
T  46392 ggcttaatagcagttttaactccttaacttttctaaagtttcaattttggcctcctaagaagaaaaaaaattacaaaactgccctctaagttttgcatct 46293  T
Q  215 gtgacagttt 224  Q
    ||||||||||    
T  46292 gtgacagttt 46283  T

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Target: scaffold0194 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 25209 - 25119
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttgcat 212  Q
    |||| |||||||||||||| ||  ||||||||| |||||||| |||||||||| |||   ||||||||||||||| || |||||||||||||||    
T  25209 aggcataatagcagttttagccttctaacttttctaaagttgtgattttagccccct---aaaaaactacaaaaccgccccctaagttttgcat 25119  T

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Target: scaffold0515 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 3625 - 3703
Alignment:
Q  106 aaatataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||| |||| | ||||||||||||||||||| ||||||||||||   |||||||||||||| ||| ||||||||||||    
T  3625 aaataaaaaaaataggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaa 3703  T

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Target: scaffold0306 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 3625 - 3703
Alignment:
Q  106 aaatataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||| |||| | ||||||||||||||||||| ||||||||||||   |||||||||||||| ||| ||||||||||||    
T  3625 aaataaaaaaaataggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaa 3703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 19915 - 20019
Alignment:
Q  121 gcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgtga 218  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||| ||| ||||||  ||||||||||||||  |  | ||||||||||||| ||||     
T  19915 gcttaatagcagttttaaccccctaaattttttaaagttgtgattttggcc-cctaagaaaaaaaactacaaaatcgtccactaagttttgcatctgtgg 20013  T
Q  219 cagttt 224  Q
    ||||||    
T  20014 cagttt 20019  T

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Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 77176 - 77111
Alignment:
Q  119 aggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| |||| ||| ||||||||||||    
T  77176 aggcttaatagtagttttaaccgcctaacttttttaaagttgcggttttggccccctaagaaaaaa 77111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 76923 - 76968
Alignment:
Q  179 aaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    ||||||||||||| | || |||||||||||||||||||| ||||||    
T  76923 aaaaaactacaaagccgccccctaagttttgcatttgtggcagttt 76968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 145623 - 145571
Alignment:
Q  164 ttttagcctcctaagaaaaaactacaaaactgctccctaagttttgcatttgt 216  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  145623 ttttggccccctaagaaaaaactacaaaactgctccctaagttttgcaattgt 145571  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 145364 - 145459
Alignment:
Q  131 agttttacccccctaacttttttaaagttgcgattttagcctcctaag--aaaaaactacaaaactgctccctaagttttgcatttgtgacagttt 224  Q
    |||||||  ||||||||||| | ||||||||||||||  || ||||||  ||||||||||||| | || || ||| |||||||| |||| ||||||    
T  145364 agttttagtcccctaactttctcaaagttgcgattttgcccccctaagaaaaaaaactacaaagccgccccttaaattttgcatctgtggcagttt 145459  T

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Target: scaffold1458 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 1457 - 1535
Alignment:
Q  106 aaatataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||| |||| | ||||||||||||||||||| ||||||||||||   ||||||| |||||| ||| ||||||||||||    
T  1457 aaataaaaaaaataggcttaatagcagttttagccccctaactttcacaaagttgagattttggccccctaagaaaaaa 1535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 9415 - 9517
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag-aaaaaactacaaaactgctccctaagttttgcatttgtgacag 221  Q
    ||||||||||||||| |||||||| |||   ||||||| |||||| |||  ||||| ||||||||||||||| |  ||||||||||||||| |||| |||    
T  9415 ttaatagcagttttagccccctaattttcccaaagttgtgatttttgccctctaagaaaaaaactacaaaaccgtcccctaagttttgcatatgtggcag 9514  T
Q  222 ttt 224  Q
    |||    
T  9515 ttt 9517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 405 - 509
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaag---aaaaaactacaaaactgctccctaagttttgcatttgtgac 219  Q
    |||||||||| |||| |||||||||||  | |||||||||||||| ||| ||||||   |||||||||||||||  | ||||||||||| ||| |||| |    
T  405 ttaatagcagctttagccccctaacttcctcaaagttgcgattttggccccctaagaaaaaaaaactacaaaaccaccccctaagttttacatatgtggc 504  T
Q  220 agttt 224  Q
    |||||    
T  505 agttt 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 3081 - 2968
Alignment:
Q  110 ataaaataaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa-ctacaaaactgctccctaagtttt 208  Q
    |||||| | ||| |||||||||||||||   |||||||||| | ||||||||||||||  ||  ||||||||||| ||| |||||||| |  ||||||||    
T  3081 ataaaaaataggattaatagcagttttagttccctaactttctcaaagttgcgattttgacc--ctaagaaaaaaactaaaaaactgccctttaagtttt 2984  T
Q  209 gcatttgtgacagttt 224  Q
    |||| |||||||||||    
T  2983 gcatatgtgacagttt 2968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 122 - 197
Alignment:
Q  118 aaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaaga-aaaaactacaaaa 192  Q
    |||||||||||||||||||| || ||||||||| | |||||||||||||| ||  ||| ||| |||||||||||||    
T  122 aaggcttaatagcagttttagcctcctaactttctcaaagttgcgatttttgctccctgagataaaaactacaaaa 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 390 - 336
Alignment:
Q  154 aaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagtttt 208  Q
    ||||||||| |||| ||| ||||||||||||||| ||||| | ||||||||||||    
T  390 aaagttgcgcttttggccccctaagaaaaaactataaaaccgttccctaagtttt 336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 21654 - 21705
Alignment:
Q  116 taaaggcttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    |||| ||||||||| ||||||| || ||||||||||||||||||||||||||    
T  21654 taaaagcttaatagtagttttagcctcctaacttttttaaagttgcgatttt 21705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 9847 - 9786
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaa 184  Q
    ||||||||||||||| ||||||||  |||||||||||| ||||||  || ||||||||||||    
T  9847 ttaatagcagttttaaccccctaatatttttaaagttgtgattttgaccccctaagaaaaaa 9786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 19652 - 19608
Alignment:
Q  123 ttaatagcagttttacccccctaacttttttaaagttgcgatttt 167  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||    
T  19652 ttaatagcagttttagtcccctaactttttcaaagttgcgatttt 19608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 405065 - 405156
Alignment:
Q  117 aaaggcttaatagcagttttacccccctaacttttttaaagttgcgattttagcctcctaagaaaaaactacaaaactgctccctaagttttg 209  Q
    |||||||||||||||||||||  ||||||| ||||   |||||  |||||| | ||||| | |||||| ||||||||||| |||||| |||||    
T  405065 aaaggcttaatagcagttttagtcccctaagttttaagaagttatgatttt-gactccttaaaaaaaaatacaaaactgccccctaaattttg 405156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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