View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10263_high_5 (Length: 242)
Name: NF10263_high_5
Description: NF10263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10263_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 43619202 - 43619426
Alignment:
| Q |
1 |
cctaaaatacacaataatggccattaagttaagaaagattagatgtaaacttcacttggaagtgtagatcataattaagtaattctaaaaagggttgtgt |
100 |
Q |
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| T |
43619202 |
cctaaaatacacaataagggccattaagttaagaaagattagatgttaactttacttggaagtgtagatcataattaaataattctcaaaagggttgtgt |
43619301 |
T |
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| Q |
101 |
caataatcttaagnnnnnnngagcacctcactaataaaaagaaaccttaatgcatacattgatatgatgaagaaaacaataattaaaagaataaatcata |
200 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43619302 |
caataatcttaagaaaaaaagagcacctcactaataaaaagaaaccttaatgcatacattgatatgatgaagaaaacaataattaaaagaataaatcata |
43619401 |
T |
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| Q |
201 |
gtaacttggacttactggtctaggt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
43619402 |
gtaacttggacttactggtctaggt |
43619426 |
T |
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