View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10263_low_15 (Length: 240)
Name: NF10263_low_15
Description: NF10263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10263_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 40739680 - 40739458
Alignment:
| Q |
1 |
tctcaatattccatctacattatataataattaaaaacacttatggccccatagctcaacagattgatcaaccaaattctattataaaaaccgataggtc |
100 |
Q |
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| T |
40739680 |
tctcaatattccatctacattatataataattaaaaacacttatggccccatagctcaacagattgatcaaccaaattctattataaaaaccgataggtc |
40739581 |
T |
|
| Q |
101 |
taatacttacaagccaactcgaccatttcacttataaatttgctatagaaacatatagtttttatactaagatagaaaatatcaaatatgtctaagggaa |
200 |
Q |
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| T |
40739580 |
tcatacttacaagccaactcgaccatttcacttataaatttgctctagaaacatatagtttttatactaagatagaaaatatcaaatatgtctaagggaa |
40739481 |
T |
|
| Q |
201 |
gaggcagtgcagctatgaacatg |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
40739480 |
gaggcagtgcagctatgaacatg |
40739458 |
T |
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