View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10265_high_41 (Length: 247)
Name: NF10265_high_41
Description: NF10265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10265_high_41 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 31524810 - 31525047
Alignment:
| Q |
1 |
cgtgtgcgtccacaacagaagctgtggacgcagcttttttcaccactggatccagtggtgacgggtttggcgatgaacttgatgatcaaataggtaagca |
100 |
Q |
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| T |
31524810 |
cgtgtgcgtccacaacagaagctgtggacgcagcttttttcaccactggatccggtggtgacgggtttggcgatgaacttgatgatcaaataggtaagca |
31524909 |
T |
|
| Q |
101 |
cttacctgagaggtttgtagagagaattaagaataagaatgtgggtttgtttcttcatgaatgggcaccacaagtcactattttgaaacatccttccatt |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31524910 |
cttacctgaggggtttgtagagagaattaagaataagaatgtgggtttgtttcttcatgaatgggcaccacaagtcactattttgaaacatccttccatt |
31525009 |
T |
|
| Q |
201 |
ggtggttttgtttcacactgtgggtggggttctgtgct |
238 |
Q |
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|||||||||||||||||||||||||||||||| ||||| |
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| T |
31525010 |
ggtggttttgtttcacactgtgggtggggttcagtgct |
31525047 |
T |
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