View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10265_high_50 (Length: 228)
Name: NF10265_high_50
Description: NF10265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10265_high_50 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 7 - 224
Target Start/End: Original strand, 31524360 - 31524577
Alignment:
| Q |
7 |
gaccatacattgagaagaaagaacctttgaaaatcccgggttgtaaatcagttcaaccaaatgacttggttgatccaatgctggaccggtacaacttgga |
106 |
Q |
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| T |
31524360 |
gaccatacattgagcagaaagaacctttgaaaatcccgggttgtaaatcagttcaaccaaatgacttggttgatccaatgctggaccggtacaacttgga |
31524459 |
T |
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| Q |
107 |
gtataaagagtacttagccgtagcgaaaaacttttccaaaagcgatgccatcttagttaacacgtgggatgaacttcaacatagagagcttaaagcactg |
206 |
Q |
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|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31524460 |
gtataaagagtacttaaccgtagcgaaaaacttctccaaaagcgatgccatcttagttaacacgtgggatgaacttcaacatagagagcttaaagcactg |
31524559 |
T |
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| Q |
207 |
aatgatgaagatggagaa |
224 |
Q |
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||||||| |||||||||| |
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| T |
31524560 |
aatgatggagatggagaa |
31524577 |
T |
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