View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10265_low_15 (Length: 344)

Name: NF10265_low_15
Description: NF10265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10265_low_15
NF10265_low_15
[»] chr8 (23 HSPs)
chr8 (18-331)||(20851940-20852253)
chr8 (1-326)||(14437878-14438209)
chr8 (1-326)||(26361615-26361945)
chr8 (4-256)||(2689560-2689813)
chr8 (1-157)||(14893311-14893466)
chr8 (76-159)||(11429907-11429990)
chr8 (1-157)||(9324310-9324465)
chr8 (1-157)||(13675390-13675545)
chr8 (1-157)||(21202110-21202265)
chr8 (1-157)||(21212526-21212681)
chr8 (1-157)||(21334928-21335083)
chr8 (1-157)||(31990928-31991083)
chr8 (1-129)||(21987025-21987151)
chr8 (1-129)||(21996559-21996685)
chr8 (83-204)||(20530492-20530612)
chr8 (3-157)||(14880963-14881116)
chr8 (83-157)||(31998598-31998672)
chr8 (76-157)||(20530397-20530478)
chr8 (94-157)||(11429837-11429900)
chr8 (83-157)||(33773483-33773557)
chr8 (1-151)||(20530147-20530296)
chr8 (76-153)||(20530309-20530386)
chr8 (83-157)||(17269453-17269527)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-331)||(6291-6621)
[»] chr7 (56 HSPs)
chr7 (4-331)||(12770540-12770865)
chr7 (1-326)||(5614729-5615061)
chr7 (12-331)||(9007400-9007719)
chr7 (1-279)||(15987941-15988224)
chr7 (1-326)||(13284983-13285311)
chr7 (1-325)||(42595840-42596168)
chr7 (1-326)||(41028055-41028385)
chr7 (1-326)||(31825175-31825504)
chr7 (1-157)||(9534515-9534669)
chr7 (1-157)||(9544798-9544952)
chr7 (4-129)||(12826657-12826782)
chr7 (1-308)||(14247778-14248088)
chr7 (1-157)||(11625641-11625796)
chr7 (1-153)||(15374338-15374490)
chr7 (1-153)||(24539741-24539893)
chr7 (1-157)||(42621722-42621877)
chr7 (76-204)||(12515731-12515858)
chr7 (76-159)||(45554009-45554092)
chr7 (4-157)||(19586377-19586529)
chr7 (1-157)||(5381089-5381244)
chr7 (1-157)||(5390727-5390882)
chr7 (1-157)||(5927765-5927920)
chr7 (1-157)||(6535114-6535269)
chr7 (1-157)||(6545435-6545590)
chr7 (1-157)||(8501679-8501834)
chr7 (1-157)||(8512149-8512304)
chr7 (229-326)||(12826846-12826945)
chr7 (1-157)||(16131191-16131346)
chr7 (1-157)||(16141740-16141895)
chr7 (1-157)||(26304185-26304340)
chr7 (1-157)||(26362478-26362633)
chr7 (1-153)||(27989727-27989879)
chr7 (1-157)||(32099010-32099165)
chr7 (1-157)||(46497744-46497899)
chr7 (1-157)||(46508356-46508511)
chr7 (76-159)||(24539992-24540075)
chr7 (1-153)||(14946745-14946896)
chr7 (1-157)||(26307745-26307900)
chr7 (76-157)||(27989635-27989716)
chr7 (1-157)||(32109447-32109602)
chr7 (1-157)||(44897928-44898083)
chr7 (1-157)||(44908353-44908508)
chr7 (1-56)||(12088056-12088111)
chr7 (73-159)||(10416436-10416522)
chr7 (83-204)||(12491926-12492046)
chr7 (76-157)||(24539904-24539985)
chr7 (76-157)||(45554099-45554180)
chr7 (1-204)||(2991165-2991369)
chr7 (76-157)||(10416526-10416607)
chr7 (1-153)||(43984294-43984445)
chr7 (83-158)||(8340837-8340912)
chr7 (83-157)||(12515865-12515939)
chr7 (1-57)||(12574912-12574968)
chr7 (42-157)||(12492060-12492174)
chr7 (76-157)||(43984105-43984187)
chr7 (76-129)||(43984227-43984280)
[»] scaffold0018 (3 HSPs)
scaffold0018 (1-331)||(60481-60804)
scaffold0018 (1-331)||(55104-55427)
scaffold0018 (1-331)||(59053-59376)
[»] scaffold0811 (3 HSPs)
scaffold0811 (76-331)||(2838-3093)
scaffold0811 (1-157)||(2588-2743)
scaffold0811 (76-157)||(2750-2831)
[»] scaffold0265 (1 HSPs)
scaffold0265 (1-316)||(11758-12072)
[»] chr1 (38 HSPs)
chr1 (1-316)||(21820737-21821051)
chr1 (1-326)||(1973961-1974290)
chr1 (1-326)||(1988748-1989077)
chr1 (1-316)||(21793223-21793537)
chr1 (3-326)||(52948976-52949303)
chr1 (1-157)||(34823598-34823753)
chr1 (1-157)||(37012982-37013137)
chr1 (1-157)||(2117485-2117640)
chr1 (1-157)||(20315061-20315216)
chr1 (76-204)||(26192615-26192742)
chr1 (1-157)||(21459258-21459413)
chr1 (1-157)||(27066710-27066865)
chr1 (76-157)||(41543267-41543348)
chr1 (76-204)||(20317217-20317344)
chr1 (1-129)||(25020127-25020253)
chr1 (1-157)||(16155513-16155668)
chr1 (76-204)||(37012762-37012887)
chr1 (76-204)||(41543355-41543483)
chr1 (1-157)||(42034844-42034999)
chr1 (76-204)||(20327699-20327826)
chr1 (76-204)||(49336245-49336372)
chr1 (1-151)||(26192364-26192514)
chr1 (18-157)||(30548919-30549056)
chr1 (18-157)||(2369716-2369853)
chr1 (94-157)||(49336379-49336442)
chr1 (76-158)||(20317129-20317211)
chr1 (83-157)||(25822521-25822595)
chr1 (1-153)||(8540895-8541046)
chr1 (1-153)||(8606134-8606285)
chr1 (83-156)||(22961535-22961608)
chr1 (76-157)||(26192527-26192608)
chr1 (76-204)||(19747832-19747958)
chr1 (83-156)||(4951061-4951134)
chr1 (1-153)||(18096195-18096347)
chr1 (76-157)||(37012894-37012975)
chr1 (95-157)||(20327630-20327692)
chr1 (1-57)||(13965776-13965832)
chr1 (83-154)||(19747684-19747752)
[»] chr5 (49 HSPs)
chr5 (4-316)||(20897427-20897739)
chr5 (1-326)||(20948308-20948637)
chr5 (1-326)||(20958677-20959006)
chr5 (136-316)||(20904128-20904306)
chr5 (1-327)||(19547719-19548049)
chr5 (76-326)||(36316815-36317069)
chr5 (1-257)||(23376235-23376495)
chr5 (1-157)||(36317076-36317232)
chr5 (1-157)||(4037450-4037605)
chr5 (1-129)||(21682846-21682972)
chr5 (76-204)||(37537942-37538069)
chr5 (76-204)||(37647053-37647180)
chr5 (3-157)||(27273654-27273807)
chr5 (1-157)||(11410385-11410540)
chr5 (1-157)||(18390864-18391019)
chr5 (1-157)||(22172723-22172878)
chr5 (1-157)||(26191299-26191454)
chr5 (1-157)||(27412778-27412933)
chr5 (1-157)||(31917442-31917597)
chr5 (1-157)||(33939950-33940105)
chr5 (1-157)||(33950350-33950505)
chr5 (1-129)||(18208733-18208859)
chr5 (1-129)||(18218071-18218197)
chr5 (76-204)||(19887409-19887536)
chr5 (1-129)||(26201881-26202007)
chr5 (1-157)||(30942760-30942916)
chr5 (1-157)||(30952182-30952338)
chr5 (1-157)||(8764641-8764796)
chr5 (1-157)||(13571150-13571305)
chr5 (1-157)||(18361907-18362062)
chr5 (1-157)||(32071070-32071225)
chr5 (76-157)||(37537854-37537935)
chr5 (76-157)||(37646965-37647046)
chr5 (1-157)||(37818229-37818384)
chr5 (83-157)||(37298366-37298440)
chr5 (1-153)||(37537691-37537843)
chr5 (1-153)||(37646802-37646954)
chr5 (1-153)||(19887159-19887310)
chr5 (1-153)||(21754169-21754320)
chr5 (1-153)||(21763456-21763607)
chr5 (83-157)||(34130041-34130115)
chr5 (76-157)||(19887321-19887402)
chr5 (76-159)||(22245151-22245234)
chr5 (4-57)||(27578630-27578683)
chr5 (83-156)||(205018-205091)
chr5 (83-156)||(20807868-20807941)
chr5 (76-129)||(21754102-21754155)
chr5 (76-129)||(21763389-21763442)
chr5 (83-156)||(42090058-42090131)
[»] scaffold0059 (1 HSPs)
scaffold0059 (5-326)||(39855-40176)
[»] chr3 (47 HSPs)
chr3 (1-331)||(11459589-11459924)
chr3 (4-326)||(49386660-49386989)
chr3 (1-326)||(24872501-24872830)
chr3 (1-326)||(24793894-24794223)
chr3 (1-157)||(19036037-19036193)
chr3 (1-157)||(17734768-17734924)
chr3 (76-204)||(2488402-2488529)
chr3 (4-153)||(2488154-2488303)
chr3 (1-157)||(11267-11422)
chr3 (1-153)||(4023406-4023557)
chr3 (1-157)||(5654906-5655061)
chr3 (1-157)||(8973476-8973631)
chr3 (1-157)||(8984031-8984186)
chr3 (1-157)||(9537765-9537920)
chr3 (1-157)||(9548091-9548246)
chr3 (1-157)||(16334696-16334851)
chr3 (1-157)||(19827509-19827664)
chr3 (1-157)||(25433739-25433895)
chr3 (76-157)||(51977926-51978007)
chr3 (76-204)||(20744237-20744364)
chr3 (84-204)||(51978022-51978141)
chr3 (76-157)||(2488314-2488395)
chr3 (1-157)||(6433364-6433519)
chr3 (1-157)||(10507948-10508103)
chr3 (95-204)||(13118990-13119098)
chr3 (76-157)||(20744149-20744230)
chr3 (76-204)||(4781975-4782102)
chr3 (76-204)||(25433605-25433732)
chr3 (1-157)||(1684531-1684686)
chr3 (1-157)||(6422937-6423092)
chr3 (76-157)||(13118883-13118964)
chr3 (94-157)||(10011579-10011642)
chr3 (4-157)||(23503147-23503295)
chr3 (95-157)||(51977857-51977919)
chr3 (1-153)||(4372174-4372325)
chr3 (1-153)||(4381915-4382066)
chr3 (1-57)||(13118720-13118777)
chr3 (1-153)||(20492665-20492816)
chr3 (1-153)||(4781725-4781876)
chr3 (76-157)||(4781887-4781968)
chr3 (1-64)||(10507134-10507197)
chr3 (76-157)||(4371985-4372067)
chr3 (76-157)||(4381726-4381808)
chr3 (83-153)||(14801788-14801858)
chr3 (76-129)||(4372107-4372160)
chr3 (76-129)||(4381848-4381901)
chr3 (1-57)||(10002705-10002761)
[»] chr6 (45 HSPs)
chr6 (1-326)||(34765812-34766143)
chr6 (87-326)||(19361355-19361598)
chr6 (1-157)||(8562578-8562734)
chr6 (1-157)||(22222758-22222914)
chr6 (1-157)||(22248593-22248749)
chr6 (4-155)||(24692442-24692593)
chr6 (76-331)||(22222921-22223180)
chr6 (76-331)||(22248756-22249015)
chr6 (76-209)||(26019936-26020068)
chr6 (231-326)||(8562771-8562869)
chr6 (76-204)||(9033825-9033952)
chr6 (1-157)||(9034047-9034201)
chr6 (76-204)||(30657318-30657445)
chr6 (1-157)||(3286476-3286631)
chr6 (1-157)||(12455683-12455838)
chr6 (1-157)||(14792232-14792387)
chr6 (1-157)||(16898576-16898731)
chr6 (1-157)||(18160691-18160846)
chr6 (1-157)||(20912912-20913067)
chr6 (1-157)||(20968472-20968627)
chr6 (1-157)||(24921274-24921429)
chr6 (1-157)||(24930310-24930465)
chr6 (76-204)||(1597566-1597693)
chr6 (2-153)||(1597792-1597943)
chr6 (75-290)||(18333209-18333427)
chr6 (1-129)||(31358220-31358346)
chr6 (1-129)||(31367950-31368076)
chr6 (76-159)||(790462-790545)
chr6 (76-157)||(1597700-1597781)
chr6 (4-324)||(15503902-15504218)
chr6 (1-157)||(16909229-16909384)
chr6 (1-157)||(18170503-18170658)
chr6 (76-157)||(18202001-18202082)
chr6 (4-153)||(27786786-27786933)
chr6 (1-157)||(790300-790455)
chr6 (76-149)||(9033967-9034040)
chr6 (76-157)||(18202089-18202170)
chr6 (1-157)||(29541076-29541231)
chr6 (1-153)||(30657156-30657307)
chr6 (1-156)||(26169046-26169200)
chr6 (1-153)||(26019686-26019837)
chr6 (76-157)||(26019848-26019929)
chr6 (1-56)||(28093359-28093412)
chr6 (18-156)||(16321953-16322089)
chr6 (18-156)||(16334101-16334237)
[»] scaffold0764 (1 HSPs)
scaffold0764 (1-326)||(54-385)
[»] scaffold0313 (3 HSPs)
scaffold0313 (1-326)||(6224-6555)
scaffold0313 (1-326)||(20381-20712)
scaffold0313 (1-103)||(10235-10337)
[»] chr4 (76 HSPs)
chr4 (1-326)||(521472-521803)
chr4 (1-326)||(17420578-17420907)
chr4 (6-331)||(6405109-6405440)
chr4 (3-282)||(8841685-8841967)
chr4 (4-256)||(13792314-13792566)
chr4 (1-326)||(26458875-26459205)
chr4 (1-129)||(518966-519094)
chr4 (76-311)||(30652061-30652295)
chr4 (76-306)||(16058757-16058993)
chr4 (1-157)||(4837276-4837432)
chr4 (1-157)||(16397879-16398034)
chr4 (1-157)||(10422413-10422568)
chr4 (5-157)||(13402067-13402219)
chr4 (1-157)||(16630163-16630318)
chr4 (76-204)||(2830218-2830345)
chr4 (4-157)||(41526930-41527083)
chr4 (1-157)||(15670710-15670865)
chr4 (1-157)||(17984148-17984303)
chr4 (1-157)||(18104698-18104853)
chr4 (1-157)||(40922473-40922628)
chr4 (1-129)||(16250105-16250231)
chr4 (1-157)||(17827274-17827430)
chr4 (1-157)||(17836665-17836821)
chr4 (76-153)||(2830444-2830521)
chr4 (76-157)||(2830528-2830609)
chr4 (76-153)||(4837439-4837516)
chr4 (1-157)||(6692848-6693003)
chr4 (1-157)||(6703254-6703409)
chr4 (1-157)||(16059000-16059156)
chr4 (76-157)||(44889561-44889642)
chr4 (18-153)||(30652306-30652440)
chr4 (76-159)||(53945550-53945633)
chr4 (76-157)||(2830352-2830433)
chr4 (1-157)||(16253866-16254021)
chr4 (230-331)||(41526574-41526678)
chr4 (76-157)||(41526842-41526923)
chr4 (76-204)||(16210411-16210538)
chr4 (83-157)||(7846097-7846171)
chr4 (1-153)||(3486726-3486877)
chr4 (1-153)||(3496049-3496200)
chr4 (1-153)||(5292187-5292338)
chr4 (1-153)||(5301846-5301997)
chr4 (1-153)||(17144363-17144515)
chr4 (1-57)||(17162318-17162375)
chr4 (1-153)||(21846920-21847071)
chr4 (1-153)||(21856512-21856663)
chr4 (1-153)||(21902783-21902934)
chr4 (1-153)||(21912375-21912526)
chr4 (1-153)||(27679852-27680003)
chr4 (1-153)||(27689507-27689658)
chr4 (76-204)||(13402226-13402353)
chr4 (76-204)||(16397669-16397796)
chr4 (94-157)||(53945480-53945543)
chr4 (1-153)||(2830620-2830771)
chr4 (76-157)||(4837527-4837608)
chr4 (76-159)||(17162129-17162212)
chr4 (76-157)||(3486891-3486973)
chr4 (76-157)||(3486984-3487066)
chr4 (76-157)||(3496214-3496296)
chr4 (76-157)||(3496307-3496389)
chr4 (76-157)||(5292445-5292527)
chr4 (76-157)||(5302104-5302186)
chr4 (76-157)||(21846731-21846813)
chr4 (76-157)||(21856323-21856405)
chr4 (76-157)||(21902594-21902676)
chr4 (76-157)||(21912186-21912268)
chr4 (76-157)||(27680110-27680192)
chr4 (76-157)||(27689765-27689847)
chr4 (76-129)||(5292352-5292405)
chr4 (76-129)||(5302011-5302064)
chr4 (76-129)||(21846853-21846906)
chr4 (76-129)||(21856445-21856498)
chr4 (76-129)||(21902716-21902769)
chr4 (76-129)||(21912308-21912361)
chr4 (76-129)||(27680017-27680070)
chr4 (76-129)||(27689672-27689725)
[»] chr2 (49 HSPs)
chr2 (1-326)||(19342771-19343101)
chr2 (4-326)||(15474756-15475078)
chr2 (1-326)||(27159198-27159527)
chr2 (1-326)||(27169546-27169875)
chr2 (1-326)||(22908069-22908398)
chr2 (10-326)||(22902596-22902916)
chr2 (4-308)||(69370-69685)
chr2 (1-157)||(45015343-45015498)
chr2 (4-157)||(29423983-29424135)
chr2 (1-157)||(24695776-24695931)
chr2 (1-157)||(37862308-37862463)
chr2 (1-157)||(38929702-38929857)
chr2 (1-157)||(45191467-45191622)
chr2 (76-204)||(3605090-3605217)
chr2 (1-156)||(41026099-41026254)
chr2 (76-159)||(16901665-16901748)
chr2 (76-159)||(16995056-16995139)
chr2 (1-157)||(2997891-2998046)
chr2 (1-157)||(18651848-18652003)
chr2 (1-157)||(18663966-18664121)
chr2 (1-153)||(21109848-21110000)
chr2 (76-157)||(22679106-22679187)
chr2 (229-326)||(23730249-23730348)
chr2 (1-157)||(38957044-38957199)
chr2 (1-129)||(32935981-32936107)
chr2 (1-157)||(9501954-9502109)
chr2 (1-157)||(9513320-9513475)
chr2 (76-157)||(16901577-16901658)
chr2 (76-157)||(16994968-16995049)
chr2 (76-157)||(3605002-3605083)
chr2 (1-153)||(16901414-16901566)
chr2 (1-153)||(16994805-16994957)
chr2 (1-157)||(17489320-17489475)
chr2 (1-157)||(44637850-44638005)
chr2 (76-157)||(44638012-44638093)
chr2 (1-153)||(4468637-4468788)
chr2 (1-153)||(5336056-5336207)
chr2 (1-153)||(5345908-5346059)
chr2 (83-156)||(12571228-12571301)
chr2 (76-153)||(33432474-33432551)
chr2 (76-153)||(33432565-33432642)
chr2 (76-157)||(4458823-4458905)
chr2 (76-157)||(4468448-4468530)
chr2 (76-157)||(5336404-5336486)
chr2 (76-157)||(5346257-5346339)
chr2 (76-129)||(4458945-4458998)
chr2 (76-129)||(4468570-4468623)
chr2 (76-129)||(5346164-5346217)
chr2 (1-153)||(22678944-22679095)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-257)||(15970-16230)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-157)||(74010-74165)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-119)||(309303-309419)
[»] scaffold0234 (2 HSPs)
scaffold0234 (1-153)||(20337-20489)
scaffold0234 (76-157)||(20500-20580)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-157)||(233272-233427)
scaffold0014 (1-154)||(147340-147492)
[»] scaffold0360 (1 HSPs)
scaffold0360 (1-157)||(898-1054)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-147)||(1-146)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-157)||(7126-7281)
[»] scaffold0118 (2 HSPs)
scaffold0118 (76-157)||(8591-8672)
scaffold0118 (76-157)||(8679-8760)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-157)||(55127-55282)
[»] scaffold0591 (1 HSPs)
scaffold0591 (1-256)||(1478-1735)
[»] scaffold0553 (1 HSPs)
scaffold0553 (4-157)||(126-278)
[»] scaffold0434 (1 HSPs)
scaffold0434 (229-326)||(14475-14574)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-157)||(111051-111206)
[»] scaffold0277 (1 HSPs)
scaffold0277 (5-157)||(18650-18802)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-157)||(1240-1395)
[»] scaffold0058 (2 HSPs)
scaffold0058 (76-157)||(28458-28539)
scaffold0058 (76-157)||(49661-49742)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-157)||(92161-92316)
[»] scaffold0611 (1 HSPs)
scaffold0611 (1-153)||(8745-8896)
[»] scaffold0142 (1 HSPs)
scaffold0142 (76-153)||(28132-28209)
[»] scaffold0106 (1 HSPs)
scaffold0106 (83-153)||(370-440)
[»] scaffold0308 (1 HSPs)
scaffold0308 (1-29)||(19725-19753)
[»] scaffold0057 (1 HSPs)
scaffold0057 (3-103)||(66229-66329)


Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 331
Target Start/End: Complemental strand, 20852253 - 20851940
Alignment:
Q  18 ttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttttacaccttttgctc 117  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||| || ||||||| |||||||| |||||||||| |||||||||| |||||||||||||    
T  20852253 ttgttcacctgaaaaattacaacacctatattctccaagcctcagcaggcttacacttttcttgctaagttacccacttagactttgacaccttttgctc 20852154  T
Q  118 aaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagataagaaggaagagagaagt 217  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20852153 aaactagcacttaagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcagaaaagataagaaggaagagagaagt 20852054  T
Q  218 ttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgctaaagcttcaaaacactctta 317  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  20852053 ttatcttttagaaaaataagagagaattgatttacacttttaaagacttcttggaatctttgtgatgatcaatttttgctaaagcttcaaaacactctta 20851954  T
Q  318 tgttgtttttcttg 331  Q
    ||||||||||||||    
T  20851953 tgttgtttttcttg 20851940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 14438209 - 14437878
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||| ||||||||||||||||||||||||  |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  14438209 tccttcaccttacaaccttgttcacctgatcaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 14438110  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga-----ctttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||||||||||     |||||| |||||| |    |||||||||||  | |||| |     
T  14438109 -tttacacctttatgctcaaactaacactttagtacccctaaagctagatgagacttttctttacaatttgtatggaggtttgaatgatatagatcagac 14438011  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | ||   ||  |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  |||    
T  14438010 aagagaagaatggaggttgagatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatatt 14437912  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  14437911 tttgctaaagcttc-aaacactcttatgttgtttt 14437878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 26361615 - 26361945
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  26361615 tcctgcaccttacaaccttgttcacctgagcaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 26361714  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagt-gtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     ||||||||||| ||||||||||| ||||| |||   ||||||||||||||||||    |||||| |||||| |  ||| |||||||||  | |||| |     
T  26361715 -tttacacctttctgctcaaactaacactttagtaccccctaaagctagatgagactttctttacaatttgtat-ggaggttgaatgatatagatcagac 26361812  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | ||   ||  |||||| |||  |||||||||||||| |||||||| ||||||| ||||||||||  |||||||||||||||||  |||    
T  26361813 aagagaagaatggaggttgagatttatc-tttgaaaagataagagagatattgattttcacttttgaagacttcttagaatctttgtgatgatcaatatt 26361911  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  26361912 tttgctaaagcttc-aaacactcttatgttgtttt 26361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 256
Target Start/End: Original strand, 2689560 - 2689813
Alignment:
Q  4 tgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    |||||||||||| ||| ||||||||||| ||||||||||| |||||||||||| | ||| ||| ||| ||   |||||| | |||||||| |||||||||    
T  2689560 tgcaccttacaatctttgttcacctgaacaattacaacacatgtattctctaatcctcagcatacttgca-ccttcttgctcagttacccacttagactt 2689658  T
Q  103 ttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagact----ttaccatttgtttatgagtttgaatgattgaaatcataaaaga 198  Q
    |||||   ||||||||||||| ||||| |||  |||||||||||||||||| |    |||| |||||| |  ||||||||||||||||||| | | ||||    
T  2689659 ttacaaactttgctcaaactaacactttagtacccctaaagctagatgagattttgattacaatttgtat-ggagtttgaatgattgaaatgagacaaga 2689757  T
Q  199 taagaaggaagagagaagtttatcttttcgaaagataagagagaattgatttacactt 256  Q
     ||||| |||| |||||  ||||| |||   || ||||||||||||||||||||||||    
T  2689758 gaagaatgaagggagaa-attatc-tttaacaatataagagagaattgatttacactt 2689813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 14893311 - 14893466
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||| |||||||||| ||| ||||||||||| |||||||| || |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  14893311 tcctacaccttacaatctttgttcacctgaacaattacaatac-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 14893408  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  14893409 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 14893466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 11429907 - 11429990
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttac 159  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  ||||||||||||||||||||||||    
T  11429907 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttac 11429990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 9324310 - 9324465
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  9324310 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 9324407  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  9324408 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 9324465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 13675545 - 13675390
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  13675545 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 13675448  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  13675447 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 13675390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 21202110 - 21202265
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  21202110 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 21202207  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  21202208 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 21202265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 21212526 - 21212681
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  21212526 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 21212623  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  21212624 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 21212681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 21335083 - 21334928
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  21335083 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 21334986  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  21334985 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 21334928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 31990928 - 31991083
Alignment:
Q  1 tcctgcaccttacaacct-tgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||| ||||||| || |||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  31990928 tcctgcatcttacaatctctgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 31991025  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  31991026 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 31991083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 21987025 - 21987151
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  21987025 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 21987122  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  21987123 ttttacaacctttgctcaacctaacactt 21987151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 21996559 - 21996685
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  21996559 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 21996656  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  21996657 ttttacaacctttgctcaacctaacactt 21996685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 20530492 - 20530612
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatga 182  Q
    |||| ||||| ||||||||||| |||||||  ||||||||| |||||||||  |||||||||||||||||||||||| |  |||||   || ||||||||    
T  20530492 taagctacccacttagacttttgcacctttaactcaaactaacacttcagtacccctaaagctagatgagactttacaagatgttt-gaagcttgaatga 20530590  T
Q  183 ttgaaatcataaaagataagaa 204  Q
    ||||||||| | |||| |||||    
T  20530591 ttgaaatcagacaagagaagaa 20530612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 14880963 - 14881116
Alignment:
Q  3 ctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagact 101  Q
    ||||||||||||| ||| ||||||||||| ||||||||    |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || |||| |||    
T  14880963 ctgcaccttacaatctttgttcacctgaacaattacaatta-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaaact 14881060  T
Q  102 tttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  14881061 tttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 14881116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 31998598 - 31998672
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| || |||||||||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  31998598 taagttaaccacttagacttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 31998672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 20530397 - 20530478
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||| |||| | |||| ||||||||||| ||||| ||| ||||||||||||||||| |||||    
T  20530397 ttcttgctaagttacccacttagaattttgctccttctgctcaaactaacactttagtatccctaaagctagatgatacttt 20530478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 11429837 - 11429900
Alignment:
Q  94 cttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||||||||||  |||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  11429837 cttagacttttacaatttttgctcaaactaacactttagtacccctaaagctagatgagacttt 11429900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 33773483 - 33773557
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| || |||||||||||||| | ||||||||||||| ||||| |||  ||||||||||||||| ||||||    
T  33773483 taagttaaccacttagacttttacaacctttgctcaaactaacactttagtacccctaaagctagatgggacttt 33773557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20530147 - 20530296
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| |||| |||||| ||||||||  | |||||||||||||| |||||| |||||||   || ||| ||||||| || ||||||    
T  20530147 tcctgcaccttacaatctttgttctcctgaacaattacaattc-tgtattctctaagcctcaacaggcttaca-ccttgttgctaagttaaccacttaga 20530244  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatga 151  Q
    ||||||||   |  |||||||||| || || |||  ||||||||||||||||    
T  20530245 cttttacaaactcagctcaaactaacattttagtacccctaaagctagatga 20530296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 20530309 - 20530386
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||| |||||||||| |||| | |||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||    
T  20530309 ttcttgctaagttacccacttaaatttttgctccttctgctcaaactaacactttagtacccctaaagctagatgaga 20530386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 17269527 - 17269453
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| || ||||||||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||||||    
T  17269527 taagttaaccacttagacttttacaaactaagctcaaactaacactttagtacccctaaagctagatgagacttt 17269453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 6291 - 6621
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| || | ||| || ||||||| |||||||| |||||||||| |||||||    
T  6291 tcctacaccttacaaccttgttcacctgaacaattacaacacctgtattctcaaaacctcagcaggcttacacttttcttgctaagttacccacttagac 6390  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagata 200  Q
    |||||||||||||||||| |||| ||||| |||  ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | |||| |    
T  6391 ttttacaccttttgctcagactaacactttagtacccctaaagctaaatgagactttacaatttgtttatgagtttgaatgattgaaatcagacaagaga 6490  T
Q  201 agaaggaagagagaagtttatctttt-cgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgctaa 299  Q
    |||| ||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  6491 agaaagaagagagaggtttatcttttaagaaagataagagagaattgatttacactttt-aagacttcttggaatctttgtgatgatcaatttttgctaa 6589  T
Q  300 agcttcaaaacactcttatgttgtttttcttg 331  Q
    ||||||||||||||||||||||||||||||||    
T  6590 agcttcaaaacactcttatgttgtttttcttg 6621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 4 - 331
Target Start/End: Complemental strand, 12770865 - 12770540
Alignment:
Q  4 tgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttt 103  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||||||||| ||||||  |||||| |||||||| |||||||||| |||| |||||    
T  12770865 tgcaccttacaaccttgttcacctgaacagttacaacacctatattctctaagcctcaacaa-cttacacttttcttgctaagttacccacttaaacttt 12770767  T
Q  104 tacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagataaga 203  Q
    |||||||||||||||||||| ||||| |||  ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||    
T  12770766 tacaccttttgctcaaactaacactttagtacccctatagctagatgagactttacaatt-gtttatgagtttgaatgattgaaatcagacaagagaaga 12770668  T
Q  204 aggaagagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgctaaagct 303  Q
    | ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  12770667 aagaagagagaagtttatcttttagaaagataagagagaactgatttacacttttaaagacttcttggaatctttgtgacgatcaatttttgctaaagct 12770568  T
Q  304 tcaaaacactcttatgttgtttttcttg 331  Q
    ||||||||||||||||||| ||||||||    
T  12770567 tcaaaacactcttatgttgcttttcttg 12770540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 5614729 - 5615061
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||  | |||||||  ||||||| |||||||||| |||||||    
T  5614729 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagtaggcttacacctttcttgctaagttacccacttagac 5614828  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga-----ctttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
    |||||||||||| ||||||||||| ||||| |||  ||||||||||||||||||     |||||| |||||| |    |||||||||||  | |||| |     
T  5614829 ttttacacctttctgctcaaactaacactttagtacccctaaagctagatgagacttttctttacaatttgtatggaggtttgaatgatatagatcagac 5614928  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | ||   ||  |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  |||    
T  5614929 aagagaagaatggaggttgagatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatatt 5615027  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  5615028 tttgctaaagcttc-aaacactcttatgttgtttt 5615061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 12 - 331
Target Start/End: Complemental strand, 9007719 - 9007400
Alignment:
Q  12 acaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttttacacctt 111  Q
    |||||||||||||  |||| |||||||||| ||||||||||||||| ||| || |||| ||  || ||||||||||||||| ||||||||| |||||||     
T  9007719 acaaccttgttcagttgaacaattacaacaactgtattctctaagcctcagcaggcttgcacctt-cttgttaagttacccacttagacttctacaccta 9007621  T
Q  112 ttgctcaaactagcacttcagtgtccctaaagctagatgagacttt----accatttgtttatgagtttgaatgattgaaatcataaaagataagaagga 207  Q
     ||||||||||| ||||| |||  | |||||||||||||||| |||    || |||||| |  |||||||||||||| |||||| | |||| |||| |||    
T  9007620 ctgctcaaactaacactttagtacctctaaagctagatgagaatttgtttacaatttgtatg-gagtttgaatgattaaaatcagacaagagaagatgga 9007522  T
Q  208 agagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgct-aaagcttca 306  Q
    || |||||| ||| ||||  | ||||||| |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||| || |||||||||    
T  9007521 ag-gagaag-ttaactttaag-aagataacagagaatttatttacacttttaaagacttcttggaatctttgtgatgatcaattttttctaaaagcttca 9007425  T
Q  307 aaacactcttatgttgtttttcttg 331  Q
    |||||||||||||||||||||||||    
T  9007424 aaacactcttatgttgtttttcttg 9007400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 15987941 - 15988224
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||| | | || |||| ||  || |||| |||||||||| ||||||     
T  15987941 tcctgcaccttacaatgttgttcacctgaacaattacaacaactgtattctctaagcctaagcaggcttgcacctt-cttgctaagttacccacttagaa 15988039  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataaaa 196  Q
    ||||||| ||| ||||||||||| ||||| |||  ||||||||||||||||||    |||||| ||||||||   |||||||||||||||||||| | ||    
T  15988040 ttttacaacttctgctcaaactaacactttagtacccctaaagctagatgagactttctttacaatttgtttggaagtttgaatgattgaaatcagacaa 15988139  T
Q  197 gataagaag---gaagagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttg 279  Q
    || ||||||   |||| ||||| |||||| |||  ||||||||||||||||||||||||||||  |||||||||||  ||||||||    
T  15988140 gagaagaagaatgaagggagaattttatc-tttaaaaagataagagagaattgatttacacttgaaaagacttcttggaatctttg 15988224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 13284983 - 13285311
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||| ||| || |||||||  ||||||| | |||||||| |||||||    
T  13284983 tcctgcaccttacaaccttgttcacctgaacaattacaacaattgtattctcttagcctcagcaggcttacacctttcttgatcagttacccacttagac 13285082  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagact---ttaccatttgtttatgagtttgaatgattgaaatcataaaa 196  Q
     ||||||||||| |||||||  || ||||| |||  |||||||||||||| |||||   ||  ||||||| |  |||||||||||||  | |||| | ||    
T  13285083 -tttacacctttatgctcaaggtaacactttagtacccctaaagctagataagactttgtttacatttgtat-ggagtttgaatgatatagatcagacaa 13285180  T
Q  197 gataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--atttt 293  Q
    || ||||| | ||   ||  |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  |||||    
T  13285181 gagaagaatggaggttgagatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatatttt 13285279  T
Q  294 tgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||| ||||||||||||||||||||    
T  13285280 tgctaaagcttc-aaacactcttatgttgtttt 13285311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 42596168 - 42595840
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||||||| ||| | |  | |||||||  ||||||| |||||||||| |||||||    
T  42596168 tcctgcaccttacaaccttgttcacgtgaacaattacaacaactgtattctcttagccttagtaggcttacacctttcttgctaagttacccacttagac 42596069  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagac----tttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     ||||||||||| ||||||||||| || || | |  |||||||||||||||||||    ||||| |||||| |  |||||||||||||  | |||| | |    
T  42596068 -tttacacctttctgctcaaactaacattttaatacccctaaagctagatgagactttgtttacaatttgtat-ggagtttgaatgatatagatcagaca 42595971  T
Q  196 agataagaa-ggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--tt 291  Q
    ||| ||||| ||| ||| ||  |||||| |||  |||||||||||| |  ||||||||||||||| || |||||||  ||||||||||||||||||  ||    
T  42595970 agagaagaatggaggag-gatatttatc-tttaaaaagataagagaaatgttgatttacacttttgaatacttcttggaatctttgtgatgatcaatgtt 42595873  T
Q  292 tttgctaaagcttcaaaacactcttatgttgttt 325  Q
    |||||||||| ||| |||||||||||||||||||    
T  42595872 tttgctaaagtttc-aaacactcttatgttgttt 42595840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 41028385 - 41028055
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  41028385 tcctgcaccttacaaccttgttcacctgaacaattacaacaacagtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 41028286  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagt-gtccctaaagctagatgagac----tttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     ||||||| ||| |  |||||||| ||||| |||   ||||| ||||| |||||||    ||||| |||||| |  |||||||||||||  | |||| |     
T  41028285 -tttacacatttcttttcaaactaacactttagtaccccctatagctatatgagactttgtttacaatttgtat-ggagtttgaatgatatagatcagac 41028188  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--tt 291  Q
    | || || || | |  ||||  || |||||| | |||||||||||| | |||||||||||||||| ||||||||||  ||||||||||||||||||  ||    
T  41028187 aggagaataatggaatgagagattcatctttgc-aaagataagagaaatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatgtt 41028089  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  41028088 tttgctaaagcttc-aaacactcttatgttgtttt 41028055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 31825504 - 31825175
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||||| |||  || || |||||||  ||||||| ||||||| || |||||||    
T  31825504 tcctgcaccttacaaccttgttcacctgaacaattacaataactgtattctcttagccacagcaagcttacacctttcttgctaagttaaccacttagac 31825405  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga-----ctttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     ||||||||||| |||||||| || || || |||  ||||||||||||||||||     |||||| |||||| |  ||  |||||||||  | |||| |     
T  31825404 -tttacacctttctgctcaaa-taacattttagtacccctaaagctagatgagacttttctttacaatttgtat-ggaagttgaatgatatagatcagac 31825308  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | ||   ||  |||||| |||  ||||||||| |||| |||||||| ||||||| ||||||||||  |||||||||||||||||  |||    
T  31825307 aagagaagaatggaggttgagatttatc-tttgaaaagataagggagatattgatttgcacttttgaagacttcttggaatctttgtgatgatcaatatt 31825209  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  31825208 tttgctaaagcttc-aaacactcttatgttgtttt 31825175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 9534515 - 9534669
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || |||||||    
T  9534515 tcctgcaccttacaatcttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttagac 9534612  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  9534613 ttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 9534669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 9544798 - 9544952
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || |||||||    
T  9544798 tcctgcaccttacaatcttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttagac 9544895  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  9544896 ttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 9544952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 12826657 - 12826782
Alignment:
Q  4 tgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttt 103  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||||| ||| ||| || | |||||  ||||||| |||||||||| ||||||| ||    
T  12826657 tgcaccttacaaccttgttcacctgaacaattacaacaattgtattctcttagcctcagcaggattacacctttcttgctaagttacccacttagac-tt 12826755  T
Q  104 tacaccttt-tgctcaaactagcactt 129  Q
    ||||||||| ||||||||||| |||||    
T  12826756 tacacctttctgctcaaactaacactt 12826782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 14247778 - 14248088
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| |||||| |||| |||||||||||||| ||||||||||| ||| || |||| ||  || |||| |||| ||||| ||||||    
T  14247778 tcctgcaccttacaatctttgttcacttgaacaattacaacacctgaattctctaagcatcagcaggcttgcacctt-cttgctaagatacccacttaga 14247876  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagact----ttaccatttgtttat-gagtttgaatgattgaaatcataa 194  Q
    ||||||||   ||||||||||||| ||||| |||  | |||||| ||||||||| |    |||| |||  ||||| |||| |||||||||||||||| |     
T  14247877 cttttacaatctttgctcaaactaacactttagtaccactaaagttagatgagattttgattacaatt--tttatggagtctgaatgattgaaatcagac 14247974  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaattt-- 292  Q
    ||||  |||| | || |||||  ||||||||   ||| ||||||||||||||||||||||||| | ||||   || ||||||  ||||||||||||||      
T  14247975 aagaagagaatggagggagaa-attatctttaacaaa-ataagagagaattgatttacactttaagagacaatttgaaatctcagtgatgatcaatttaa 14248072  T
Q  293 ttgctaaagcttcaaa 308  Q
     |||||||||||||||    
T  14248073 atgctaaagcttcaaa 14248088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 11625641 - 11625796
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  11625641 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 11625738  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| ||||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  11625739 ttttacaacttttgctcaacctaacactttaggacctctaaaagctagatgagacttt 11625796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 15374490 - 15374338
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  15374490 tcctgcaccttacaatccttgttcacttgaacaattacaacaactgtattctctaagcctcagcaggcttgcacattg-ttgctaagttaaccacttaga 15374392  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||||| | ||| | ||||||| ||||| ||| |||||||| ||||||||||    
T  15374391 cttttacaacctttacacaaactaacactttagtatccctaaatctagatgaga 15374338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 24539741 - 24539893
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||| || |||| ||   || ||| ||||||| || ||||||    
T  24539741 tcctgcaccttacaatccttgttcacctgaacaattacaacatctgtattctctaagcctcagcaggcttgca-ccttgttgctaagttaaccacttaga 24539839  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  24539840 cttttacaaactcagctcaaactaacactttagtacccctaaagctagatgaga 24539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 42621877 - 42621722
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||| ||||| ||| ||||| | |||||||||||||| ||| || |||| || |||  ||| ||||||| || ||||||    
T  42621877 tcctgcaccttacaatctttgttcatctgaacaataacaactc-tgtattctctaagcctcagcaggcttgcactttg-ttgctaagttaaccacttaga 42621780  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  42621779 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 42621722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 12515858 - 12515731
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| ||||||| || ||||| |||  |||||||||||||||||||||||| |  |||||  ||| |    
T  12515858 ttcttgctaagttacccacttagacttttgcacctttagctcaaaataacactttagtacccctaaagctagatgagactttacaagatgttt-cgagct 12515760  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  12515759 tgaatgattgaaatcaaacaagagaagaa 12515731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 45554092 - 45554009
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttac 159  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  ||||||||||||||||||||||||    
T  45554092 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttac 45554009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 19586529 - 19586377
Alignment:
Q  4 tgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    |||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || |||||||||    
T  19586529 tgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttagactt 19586432  T
Q  103 ttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  19586431 ttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 19586377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 5381089 - 5381244
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  5381089 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 5381186  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  5381187 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 5381244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 5390727 - 5390882
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  5390727 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 5390824  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  5390825 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 5390882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 5927920 - 5927765
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  5927920 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 5927823  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  5927822 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 5927765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6535269 - 6535114
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  6535269 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 6535172  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  6535171 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 6535114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6545590 - 6545435
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  6545590 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 6545493  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  6545492 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 6545435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 8501834 - 8501679
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  8501834 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 8501737  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  8501736 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 8501679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 8512304 - 8512149
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  8512304 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 8512207  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  8512206 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 8512149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 229 - 326
Target Start/End: Original strand, 12826846 - 12826945
Alignment:
Q  229 aaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--tttttgctaaagcttcaaaacactcttatgttgttt 325  Q
    |||||||||||| | |||||||||||||||| ||||||||||  ||||||||||||||||||  |||||| |||||| || |||||||||||||||||||    
T  12826846 aaagataagagaaatattgatttacacttttgaagacttcttagaatctttgtgatgatcaatgtttttgttaaagcgtc-aaacactcttatgttgttt 12826944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 16131191 - 16131346
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  16131191 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 16131288  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  16131289 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 16131346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 16141740 - 16141895
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  16141740 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 16141837  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  16141838 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 16141895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 26304340 - 26304185
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  26304340 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 26304243  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  26304242 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 26304185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 26362478 - 26362633
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  26362478 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 26362575  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  26362576 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 26362633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 27989879 - 27989727
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||| || |||| ||   || ||| ||||||| || ||||||    
T  27989879 tcctgcaccttacaatccttgttcacctgaacaattacaacaactgtattctctaagcctcagcaggcttgca-ccttgttgctaagttaaccacttaga 27989781  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  ||||||||||| ||||||    
T  27989780 cttttacaaactcagctcaaactaacactttagtacccctaaagctatatgaga 27989727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 32099165 - 32099010
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  32099165 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 32099068  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  32099067 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 32099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 46497899 - 46497744
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  46497899 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 46497802  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  46497801 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 46497744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 46508511 - 46508356
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  46508511 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 46508414  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  46508413 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 46508356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 24539992 - 24540075
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttac 159  Q
    |||||| |||||||||| ||||||||||| ||| ||| |||||||||| ||||| |||  ||||||||||||||||||||||||    
T  24539992 ttcttgctaagttaccctcttagacttttgcacatttagctcaaactaacactttagtacccctaaagctagatgagactttac 24540075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 14946896 - 14946745
Alignment:
Q  1 tcctgcaccttacaaccttg-ttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| |||  |||||||||| ||||||||| | |||||||||||||| ||| || |||| || |||  ||| ||||||| || ||||||    
T  14946896 tcctgcaccttacaaactttattcacctgaacaattacaac-cttgtattctctaagcctcagcaggcttgcactttg-ttgctaagttaaccacttaga 14946799  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||||| | ||| | ||||||| ||||| ||| |||||||| ||||||||||    
T  14946798 cttttacaacctttacacaaactaacactttagtatccctaaatctagatgaga 14946745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 26307900 - 26307745
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| ||||||||||| || ||||||| | |||||||||||||||| ||| || |||| ||  || |||| ||||||| || |||||||    
T  26307900 tcctgcaccttacaatcttgttcacctaaacaattaca-ctcctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttagac 26307803  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  26307802 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 26307745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 27989716 - 27989635
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||||||| ||||| |||  | ||||||||||||||||||||    
T  27989716 ttcttgctaagttacccacttagacttttacaacctttgctcaaactaacactttagtacctctaaagctagatgagacttt 27989635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 32109602 - 32109447
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || ||||||     
T  32109602 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagat 32109505  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  32109504 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 32109447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 44898083 - 44897928
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  44898083 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 44897986  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||||   ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  44897985 ttttacaatctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 44897928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 44908508 - 44908353
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  44908508 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 44908411  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||||   ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  44908410 ttttacaatctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 44908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12088111 - 12088056
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaag 56  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  12088111 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctataag 12088056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 10416522 - 10416436
Alignment:
Q  73 tttttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttac 159  Q
    ||||||||||||| |||||| ||||||||||| ||||||| |||||||||| ||||| | |  | |||||| |||||||||||||||    
T  10416522 tttttcttgttaatttaccctcttagacttttgcacctttagctcaaactaacactttattacctctaaagttagatgagactttac 10416436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 12492046 - 12491926
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatga 182  Q
    |||||||||| ||||||||||| ||||||| ||||||| || ||||| |||  |||||||| ||||||||| |||||    ||||| |||| ||||||||    
T  12492046 taagttacccacttagacttttgcacctttagctcaaaataacactttagtacccctaaagttagatgagaatttacaggatgttt-tgagcttgaatga 12491948  T
Q  183 ttgaaatcataaaagataagaa 204  Q
    ||||||||| | |||| |||||    
T  12491947 ttgaaatcagacaagagaagaa 12491926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 24539904 - 24539985
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||| |||  || |||||||||||||||||||    
T  24539904 ttcttgctaagttacccacttagacttttgctccttctgctcaaactaacactttagtacccataaagctagatgagacttt 24539985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 45554180 - 45554099
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||| ||| ||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  45554180 ttcttgctaagttgcccacttagacttttgctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 45554099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 2991165 - 2991369
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||| ||| |||||||||| |||||| |||| ||||| ||||||||||||||  |||| ||| || |||| ||  || |||| |||||||||| ||||||    
T  2991165 tcctacactttacaacctttgttcacttgaacaattataacacctgtattct--aagcctcagcaggcttgcacatt-cttgctaagttacccacttaga 2991261  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     ||||| |   ||| ||||||||| ||||| |||  ||||||||||||||||||    |||||| |||||  || ||||||||||||||||||||| | |    
T  2991262 attttagaatatttactcaaactaacactttagtacccctaaagctagatgagactctctttacaatttgagta-gagtttgaatgattgaaatcagaca 2991360  T
Q  196 agataagaa 204  Q
    ||| |||||    
T  2991361 agagaagaa 2991369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 10416607 - 10416526
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| |||| | |||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  10416607 ttcttgctaagttacccacttatattttttctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 10416526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 43984445 - 43984294
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  43984445 tcctgcaccatacaatcttcgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 43984348  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  43984347 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 43984294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 8340912 - 8340837
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttta 158  Q
    ||||||| || ||||||||||||||  |||||||||||||| ||||| |||  |||||||  ||||||||||||||    
T  8340912 taagttaaccacttagacttttacaatttttgctcaaactaacactttagtacccctaaaattagatgagacttta 8340837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 12515939 - 12515865
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||||| ||||| ||||||||   ||||||||||||| ||||| |||  |||||||||||| |||||||||    
T  12515939 taagttacccacttagtcttttacaatctttgctcaaactaacactttagtacccctaaagctagttgagacttt 12515865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12574968 - 12574912
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagc 57  Q
    |||||||| |||||| |||||||||||||| ||||||| || |||||||||| ||||    
T  12574968 tcctgcactttacaatcttgttcacctgaacaattacatcaactgtattctccaagc 12574912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 12492174 - 12492060
Alignment:
Q  42 cctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaa 141  Q
    |||||||||||||||| ||  ||||||| ||  || |||  |||||||||| ||||| ||||||||   ||||||||||||| ||||| | |  ||||||    
T  12492174 cctgtattctctaagcctcggcatgcttgcagctt-ctttctaagttacccacttagtcttttacaatctttgctcaaactaacactttaatacccctaa 12492076  T
Q  142 agctagatgagacttt 157  Q
    |||||| |||||||||    
T  12492075 agctagttgagacttt 12492060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 43984187 - 43984105
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  43984187 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 43984105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 43984280 - 43984227
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  43984280 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 43984227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 167; Significance: 2e-89; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 60804 - 60481
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||  ||||||||||| |||||||  ||||||||||||||||| ||| || |||| || |||||||| |||||||||| ||||||    
T  60804 tcctgcaccttacaatctacgttcacctgaacaattacacaacctgtattctctaagcctcagcaggcttgcacttttcttgctaagttacccacttaga 60705  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagat 199  Q
    ||||||||| |||||||||||||| ||||| |||  ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| | |||      
T  60704 cttttacacattttgctcaaactaacactttagtacccctaaaactagatgagactttacagtttgtttatgagtttgaatgattgaaatcagacaag-- 60607  T
Q  200 aagaaggaagagagaagtttatctttt-cgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgcta 298  Q
         |||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  60606 -----ggaagaaagaagtttatcttttatgaaagataagagagaattgatttacactttt-aagacttcttgaaatctttgtgatgatcaatttttgcta 60513  T
Q  299 aagcttcaaaacactcttatgttgtttttcttg 331  Q
    ||||||||||| | |||| ||||||||||||||    
T  60512 aagcttcaaaataatctt-tgttgtttttcttg 60481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 55427 - 55104
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||  ||||||||||| |||||||  ||||||||||||||||| ||| || |||| || |||||||| |||||||||| ||||||    
T  55427 tcctgcaccttacaatctacgttcacctgaacaattacacaacctgtattctctaagcctcagcaggcttgcacttttcttgctaagttacccacttaga 55328  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagat 199  Q
    ||||||||| |||||||||||||| ||||| |||  ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| | |||      
T  55327 cttttacacattttgctcaaactaacactttagtacccctaaaactagatgagactttacagtttgtttatgagtttgaatgattgaaatcagacaag-- 55230  T
Q  200 aagaaggaagagagaagtttatctttt-cgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgcta 298  Q
         |||||| |||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||    
T  55229 -----ggaagaaagaagtttatcttttatgaatgataagagagaattgatttacactttt-aagacttcttgaaatctttgtgatgatcaatttttgtta 55136  T
Q  299 aagcttcaaaacactcttatgttgtttttcttg 331  Q
    ||||||||||||| |||| ||||||||||||||    
T  55135 aagcttcaaaacaatctt-tgttgtttttcttg 55104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 59376 - 59053
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||  ||||||||||| |||||||  ||||||||||||||||| ||| || |||| || |||||||| |||||||||| ||||||    
T  59376 tcctgcaccttacaatctacgttcacctgaacaattacacaacctgtattctctaagcctcagcaggcttgcacttttcttgctaagttacccacttaga 59277  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagat 199  Q
    ||||||||| |||||||||||||| ||||| |||  ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| | |||      
T  59276 cttttacacattttgctcaaactaacactttagtacccctaaaactagatgagactttacagtttgtttatgagtttgaatgattgaaatcagacaag-- 59179  T
Q  200 aagaaggaagagagaagtttatctttt-cgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgcta 298  Q
         |||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||    
T  59178 -----ggaagaaagaagtttatcttttatgaaagataagagagaattgatttacactttt-aagacttcttgaaatctttgtgatgatcaatttttgtta 59085  T
Q  299 aagcttcaaaacactcttatgttgtttttcttg 331  Q
    ||||||||||| | |||| ||||||||||||||    
T  59084 aagcttcaaaataatctt-tgttgtttttcttg 59053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 160; Significance: 3e-85; HSPs: 3)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 76 - 331
Target Start/End: Original strand, 2838 - 3093
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| | |||||||| ||||||||||||||||||  |||||||||| ||||| |||  || ||||||||||||||||||||| |  ||||| ||||||    
T  2838 ttcttgctgagttacccacttagacttttacaccttcagctcaaactaccactttagtacccgtaaagctagatgagactttacaagatgtttgtgagtt 2937  T
Q  176 tgaatgattgaaatcataaaagataagaaggaagagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttcaaatc 275  Q
    |||||||||||||||| | |||| ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||  ||||    
T  2938 tgaatgattgaaatcagacaagaaaagaaggtagagagaagtttatctttgagaaaaataagagagaattgatttacacttttaaagacttcttggaatc 3037  T
Q  276 tttgtgatgatcaatttttgctaaagcttcaaaacactcttatgttgtttttcttg 331  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3038 tttgtgatgatcaatttttgctaaagctccaaaacactcttatgttgtttttcttg 3093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 2588 - 2743
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||  ||||||| ||||| ||||||| || ||||||||||||||| ||| || | || ||  || |||| ||||| |||| |||||||    
T  2588 tcctgcaccttacaatgttgttcaactgaacaattacatcaactgtattctctaagcctcagcaggattgcacctt-cttgctaagtgacccacttagac 2686  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| ||| ||||||||||| ||||| |||  ||||||||||||| ||||||||    
T  2687 ttttacatcttctgctcaaactaacactttagtacccctaaagctagacgagacttt 2743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 2750 - 2831
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||||||||||   ||||||||| ||||| |||   |||||||||||||||||||||    
T  2750 ttcttgctaagttacccacttagacttttacaccttcaactcaaactaccactttagtacacctaaagctagatgagacttt 2831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 12072 - 11758
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaatt-acaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttag 98  Q
    ||||||||||||||| ||| ||||||||||| |||| |||  ||||||||||||||||| ||| || |||| || |||||||| |||||||| | |||      
T  12072 tcctgcaccttacaatctttgttcacctgaacaatttacacaacctgtattctctaagcctcaccaggcttgcacttttcttgctaagttacacacttct 11973  T
Q  99 acttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaaga 198  Q
    |||||||||||||||| |||||||| ||||| |||  |||||| | ||||||||||||||| |||||||| |||||||||||||||||||||| |  ||     
T  11972 acttttacaccttttg-tcaaactaacactttagtacccctaatgttagatgagactttacaatttgtttgtgagtttgaatgattgaaatcagaccagg 11874  T
Q  199 taagaaggaagagagaagtttatctttt-cgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgct 297  Q
     ||||| ||  ||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  11873 gaagaaaga--agataagtttatcttttatgaaagataagagagaattgatttacactttt-aagacttcttggaatctttgtgatgatcaatttttgct 11777  T
Q  298 aaagcttcaaaacactctt 316  Q
    |||||||||||||| ||||    
T  11776 aaagcttcaaaacaatctt 11758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 7e-71; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 21820737 - 21821051
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaatt-acaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttag 98  Q
    ||||||||||||||| ||| ||||||||||| |||| |||  ||||||||||||||||| ||| || |||| || |||||||| |||||||| | |||      
T  21820737 tcctgcaccttacaatctttgttcacctgaacaatttacacaacctgtattctctaagcctcaccaggcttgcacttttcttgctaagttacacacttct 21820836  T
Q  99 acttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaaga 198  Q
    |||||||||||||||| |||||||| ||||| |||  |||||| | ||||||||||||||| |||||||| |||||||||||||||||||||| |  ||     
T  21820837 acttttacaccttttg-tcaaactaacactttagtacccctaatgttagatgagactttacaatttgtttgtgagtttgaatgattgaaatcagaccagg 21820935  T
Q  199 taagaaggaagagagaagtttatctttt-cgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgct 297  Q
     ||||| ||  ||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  21820936 gaagaaaga--agataagtttatcttttatgaaagataagagagaattgatttacactttt-aagacttcttggaatctttgtgatgatcaatttttgct 21821032  T
Q  298 aaagcttcaaaacactctt 316  Q
    |||||||||||||| ||||    
T  21821033 aaagcttcaaaacaatctt 21821051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 1973961 - 1974290
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  1973961 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 1974060  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||||||||||    |||||| |||||| |  ||| |||||||||  | |||| | |    
T  1974061 -tttacacctttctgctcaaactaacactttagtacccctaaagctagatgagactttctttacaatttgtat-ggaggttgaatgatatagatcagaca 1974158  T
Q  196 agataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--attt 292  Q
    ||| ||||| | ||   ||  |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  ||||    
T  1974159 agagaagaatggaggttgagatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatattt 1974257  T
Q  293 ttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||||| ||||||||||||||||||||    
T  1974258 ttgctaaagcttc-aaacactcttatgttgtttt 1974290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 1988748 - 1989077
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  1988748 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 1988847  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatg-agtttgaatgattgaaatcataa 194  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||||||||||    |||||| |||||  |||| || |||||||||  | |||| |     
T  1988848 -tttacacctttctgctcaaactaacactttagtacccctaaagctagatgagactttctttacaatttg--tatgaaggttgaatgatatagatcagac 1988944  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | ||   ||  |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  |||    
T  1988945 aagagaagaatggaggttgagatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatatt 1989043  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  1989044 tttgctaaagcttc-aaacactcttatgttgtttt 1989077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 21793537 - 21793223
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaatt-acaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttag 98  Q
    |||| |||||||||| ||| ||||||||||| |||| |||| ||||||||||||||||| ||| || |||| || ||||||| ||||||||| | |||||    
T  21793537 tcctacaccttacaatctttgttcacctgaacaatttacaaaacctgtattctctaagcctcagcaggcttgcacttttcttattaagttacacacttag 21793438  T
Q  99 acttttacaccttttgctcaaactagcacttcagt-gtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaag 197  Q
    ||||||||||||||||||||||||| ||||| |||   ||||| || |||||||||| |||  |||||||| ||||| |||||||||||||| | | |||    
T  21793437 acttttacaccttttgctcaaactaacactttagtaccccctataggtagatgagaccttaaaatttgtttgtgagtctgaatgattgaaattagacaag 21793338  T
Q  198 ataagaaggaagagagaagtttatctttt-cgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgc 296  Q
      ||||| ||  || ||||||||||||||  ||||||||||||||||||||| ||||   || |||||||||| |||||||||   ||||||||||||||    
T  21793337 ggaagaaaga--agggaagtttatcttttatgaaagataagagagaattgatataca---tttaagacttcttgaaatctttgcattgatcaatttttgc 21793243  T
Q  297 taaagcttcaaaacactctt 316  Q
    ||||||||||||||| ||||    
T  21793242 taaagcttcaaaacaatctt 21793223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 3 - 326
Target Start/End: Original strand, 52948976 - 52949303
Alignment:
Q  3 ctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    |||||||||||||||||||||||||||| ||||||||||  |||||||||| ||| ||| ||  ||||||  ||||||| |||||||||| ||||||| |    
T  52948976 ctgcaccttacaaccttgttcacctgaacaattacaacaattgtattctcttagcctcagcagacttacacctttcttgctaagttacccacttagac-t 52949074  T
Q  103 ttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagac----tttaccatttgtttatgagtttgaatgattgaaatcataaaag 197  Q
    |||||||||| ||||||||||| ||||| |||  |||||||||||||||||||    ||||| |||||| |  |||||||||||||  | |||| | |||    
T  52949075 ttacacctttctgctcaaactaacactttagtacccctaaagctagatgagactttgtttacaatttgtat-ggagtttgaatgatatagatcaaacaag 52949173  T
Q  198 ataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--ttttt 294  Q
    | | |||   || ||||  |||||| |||  |||||||||||| | |||||||||||||||| ||||||||||  ||||||||||||||||||  |||||    
T  52949174 agatgaatagagggagatatttatc-tttaaaaagataagagaaatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatgttttt 52949272  T
Q  295 gctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||| ||||||||||||||||||||    
T  52949273 gctaaagcttc-aaacactcttatgttgtttt 52949303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 34823753 - 34823598
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||| |||||| |||||||   |||||| ||||||| || |||||||    
T  34823753 tcctgcaccttacaatcttgttcacctgaacaatgacaacaactgtattctctaagcctcaacaggcttaca-ccttcttgctaagttatccacttagac 34823655  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| || ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  34823654 ttttacacattatgctcaaactaacactttagtacccctaaagctagatgagacttt 34823598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 37013137 - 37012982
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||| |||||| ||||||||| |||| ||||||| || ||||||||||||||| ||| || |||| ||  || ||||||||||||||| |||||||    
T  37013137 tcctgcactttacaatcttgttcacttgaacaattacatcaactgtattctctaagcctcagcaggcttgcacctt-cttgttaagttacccacttagac 37013039  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| | ||||||||||||| ||||| |||  |||||||||||| |||||||||    
T  37013038 ttttacaacctttgctcaaactaacactttagtacccctaaagctagttgagacttt 37012982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 2117640 - 2117485
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  2117640 tcctgcacctttcaatccttgttcacctgaaaaattacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 2117543  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||| ||||||||| ||||| |||  ||||||||||||||||||||||    
T  2117542 cttttacaacctttactcaaactaacactttagtacccctaaagctagatgagacttt 2117485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20315216 - 20315061
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  20315216 tcctgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 20315119  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  20315118 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 20315061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 26192615 - 26192742
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  26192615 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 26192713  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  26192714 tgaatgattgaaatcagacaagagaagaa 26192742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 21459413 - 21459258
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  21459413 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 21459316  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  21459315 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 21459258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 27066865 - 27066710
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||    |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  27066865 tcctgcaccttacaatctttgttcacctgaacaattacaatta-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 27066768  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  27066767 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 27066710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 41543267 - 41543348
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||||| |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  41543267 ttcttgctaagttacccacttagacttttactccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 41543348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 20317217 - 20317344
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||| ||||||||||||||| |  |||||   || |    
T  20317217 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaaggtagatgagactttacaagatgttt-gaagct 20317315  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  20317316 tgaatgattgaaatcaaacaagagaagaa 20317344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 25020253 - 25020127
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  25020253 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaacctcttagac 25020156  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  25020155 ttttacaacctttgctcaacctaacactt 25020127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16155668 - 16155513
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  16155668 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcatgtattctctaagcctcagcaagcttgca-ccttcttgctaagttaaccacttagac 16155571  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  16155570 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 16155513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 37012887 - 37012762
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  ||||||||||||||||  |||||| |  |||||  ||| |    
T  37012887 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatga--ctttacaagatgtttg-gagct 37012791  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  37012790 tgaatgattgaaatcagacaagagaagaa 37012762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 41543355 - 41543483
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccc-taaagctagatgagactttaccatttgtttatgagt 174  Q
    |||||| |||||||||| ||||||||||| ||||||| || ||||||| ||||| |||  ||| ||||||||||||||||||||| |  |||||  |||     
T  41543355 ttcttgctaagttacccacttagacttttgcacctttagcccaaactaacactttagtaccccttaaagctagatgagactttacaagatgttt-ggagc 41543453  T
Q  175 ttgaatgattgaaatcataaaagataagaa 204  Q
    ||||||||||||||||| | |||| |||||    
T  41543454 ttgaatgattgaaatcagacaagagaagaa 41543483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 42034999 - 42034844
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||| ||| ||||||||  | |||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  42034999 tcctgcaccttacaatctttgttcaccagaacaattacaattc-tgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 42034902  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||| || | || |||||||||| ||||| |||  ||||||||||||||||||||||    
T  42034901 cttttgcaaccttcgctcaaactaacactttagtacccctaaagctagatgagacttt 42034844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 20327699 - 20327826
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| || |||||||| ||||||| |||||||||| ||||| |||  |||||||| ||||||||||||||| |  |||||   || |    
T  20327699 ttcttgctaagttacccactaagacttttgcacctttagctcaaactaacactttagtacccctaaaggtagatgagactttacaagatgttt-gaagct 20327797  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  20327798 tgaatgattgaaatcagacaagagaagaa 20327826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 49336372 - 49336245
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| ||||||||||  |||||||||| ||||||| |||||||||| || || |||  ||||||| |||||||||||||||| || |||||   || |    
T  49336372 ttcttgctaagttacccatttagacttttgcacctttagctcaaactaacattttagtacccctaaaactagatgagactttacaatatgttt-gaagct 49336274  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    ||||||||||| |||| | ||||||||||    
T  49336273 tgaatgattgagatcagacaagataagaa 49336245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 26192364 - 26192514
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||| || |||| ||    | ||| ||||||| || ||||||    
T  26192364 tcctgcaccttacaatccttgttcacctgaacaattacaacaactgtattctctaagcctcagcaggcttgca-ccctgttgctaagttaaccacttaga 26192462  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatga 151  Q
    ||||||||   |  |||||||||| || || |||  ||||||||||||||||    
T  26192463 cttttacaaactcagctcaaactaacattttagtacccctaaagctagatga 26192514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 30548919 - 30549056
Alignment:
Q  18 ttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttttacaccttttgctc 117  Q
    ||||||||||||| ||||||||| | |||||||||||||| | | ||  ||| ||  ||  ||| ||||||| || |||||||||||||| | |||||||    
T  30548919 ttgttcacctgaacaattacaactc-tgtattctctaagcctaagcagacttgcaccttg-ttgctaagttaaccacttagacttttacaacctttgctc 30549016  T
Q  118 aaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| ||||| |||  ||||||||||||||||||||||    
T  30549017 aaactaacactttagtacccctaaagctagatgagacttt 30549056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 2369716 - 2369853
Alignment:
Q  18 ttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttttacaccttttgctc 117  Q
    |||||||| |||| |||||||| |  |||||||||||||| ||| || |||| ||  || |||| ||||||| || |||||||||||||| | |||||||    
T  2369716 ttgttcacgtgaacaattacaa-atatgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttagacttttacaacctttgctc 2369813  T
Q  118 aaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||| | ||||| |||  |||||||| |||||||||||||    
T  2369814 aaacaaacactttagtacccctaaagttagatgagacttt 2369853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 49336442 - 49336379
Alignment:
Q  94 cttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||||||||||   ||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  49336442 cttagacttttacaatatttgctcaaactaacactttagtatccctaaagctagatgagacttt 49336379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 158
Target Start/End: Original strand, 20317129 - 20317211
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttta 158  Q
    |||||| |||||| ||| ||||||||||  | |||| ||||||||||| ||||| |||  |||||||||||||||||||||||    
T  20317129 ttcttgctaagttgcccacttagactttagctccttctgctcaaactaacactttagtacccctaaagctagatgagacttta 20317211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 25822521 - 25822595
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| || |||||||| |||||  |||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  25822521 taagttaaccacttagactcttacaatttttgctcaaactaacactttagtacccctaaagctagatgagacttt 25822595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8541046 - 8540895
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| |||||||||  ||||||||||||||| ||| ||  ||| ||   || ||| ||||||| |  ||||||    
T  8541046 tcctgcaccttacaatctttgttcacctgaacaattacaac-tctgtattctctaagcatcagcagacttgca-ccttgttgctaagttaactacttaga 8540949  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    | |||||| | ||| ||||||||| ||||| |||  ||||||||||||||||||    
T  8540948 cgtttacaaccttttctcaaactaacactttagtacccctaaagctagatgaga 8540895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8606285 - 8606134
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| |||||||||  ||||||||||||||| ||| ||  ||| ||   || ||| ||||||| |  ||||||    
T  8606285 tcctgcaccttacaatctttgttcacctgaacaattacaac-tctgtattctctaagcatcagcagacttgca-ccttgttgctaagttaactacttaga 8606188  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    | |||||| | ||| ||||||||| ||||| |||  ||||||||||||||||||    
T  8606187 cgtttacaaccttttctcaaactaacactttagtacccctaaagctagatgaga 8606134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 22961608 - 22961535
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactt 156  Q
    ||||||| || |||||||||||||| | ||| ||||||||| ||||| |||  |||||||||||||||||||||    
T  22961608 taagttaaccacttagacttttacaacctttactcaaactaacactttagtacccctaaagctagatgagactt 22961535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 26192527 - 26192608
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| |||| | |||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  26192527 ttcttgctaagttacccacttaaatttttgctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 26192608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 19747832 - 19747958
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| || | ||||| ||||| |||  |||||||| ||||||||||||||| |  |||||  ||| |    
T  19747832 ttcttgctaagttacccacttagacttttgcacctttagc-ccaactaacactttagtacccctaaagttagatgagactttacaagatgttt-ggagct 19747929  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    ||||||||| |||||| | |||| |||||    
T  19747930 tgaatgattaaaatcagacaagagaagaa 19747958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 4951134 - 4951061
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactt 156  Q
    ||||||| || ||||||||||||||   ||||||||| ||| ||||| |||  |||||||||||||||||||||    
T  4951134 taagttaaccacttagacttttacaatctttgctcaagctaacactttagtacccctaaagctagatgagactt 4951061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 18096195 - 18096347
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||||||||||| || ||| ||||||||||| |||||||  || |||||||||||||| ||| || |||| ||   || ||| ||||||| || ||||||    
T  18096195 tcctgcaccttagaatctttgttcacctgaacaattacacaacttgtattctctaagcctcagcaggcttgca-ccttgttgctaagttaaccacttaga 18096293  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||  |||  ||||||||||||||||||    
T  18096294 cttttacaaactcagctcaaactaacactatagtacccctaaagctagatgaga 18096347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 37012975 - 37012894
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||  ||||||||||| | |||| ||||||||||| ||||| |||  |||||||| |||| ||||||||    
T  37012975 ttcttgctaagttacctacttagacttttgctccttctgctcaaactaacactttagtacccctaaaggtagacgagacttt 37012894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 20327630 - 20327692
Alignment:
Q  95 ttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||||  | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  20327630 ttagactttagctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 20327692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13965832 - 13965776
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagc 57  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| | ||||||||||||||    
T  13965832 tcctgcaccttacaatctttgttcacctgaacaattacaac-catgtattctctaagc 13965776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 19747684 - 19747752
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagac 154  Q
    |||||||||| ||||||||||||| ||||   ||||||||| ||||| |||  ||||| |||||||||||||    
T  19747684 taagttacccacttagacttttactcctt---ctcaaactaacactttagtacccctacagctagatgagac 19747752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 4e-69; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 4 - 316
Target Start/End: Complemental strand, 20897739 - 20897427
Alignment:
Q  4 tgcaccttacaacctt-gttcacctgaaaaatt-acaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagact 101  Q
    |||||||||||| ||| ||||||||||| |||| |||| ||||||||||||||||| ||| || |||| || |||||||  |||||||| | ||||||||    
T  20897739 tgcaccttacaatctttgttcacctgaacaatttacaaaacctgtattctctaagcctcagcaggcttgcacttttcttactaagttacacacttagact 20897640  T
Q  102 tttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagataa 201  Q
    |||||||||||||||||||||| ||||| |||  ||||| || ||||||||||||||| ||||||||  || |||||||||||||||||| | |||  ||    
T  20897639 tttacaccttttgctcaaactaacactttagtacccctataggtagatgagactttacaatttgtttgagaatttgaatgattgaaatcagataagggaa 20897540  T
Q  202 gaaggaagagagaagtttatctttt-cgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgctaaa 300  Q
    ||| ||  || ||||||||||||||  ||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||||||||||||||||      
T  20897539 gaaaga--agggaagtttatcttttatgaaagataagagagaattgatatacactttt-aagacttcttggaatctttgtgatgatcaatttttgctacg 20897443  T
Q  301 gcttcaaaacactctt 316  Q
    ||||||||||| ||||    
T  20897442 gcttcaaaacaatctt 20897427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 20948637 - 20948308
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  20948637 tcctacaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 20948538  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||||||||||    |||||| |||||| |  ||| |||||||||  | |||| | |    
T  20948537 -tttacacctttctgctcaaactaacactttagtacccctaaagctagatgagactttctttacaatttgtat-ggaggttgaatgatatagatcagaca 20948440  T
Q  196 agataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--attt 292  Q
    ||| ||||| | ||   ||  ||||||||||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  ||||    
T  20948439 agagaagaatggaggttgagatttatctttt-aaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatattt 20948341  T
Q  293 ttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||||| ||||||||||||||||||||    
T  20948340 ttgctaaagcttc-aaacactcttatgttgtttt 20948308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 20959006 - 20958677
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  20959006 tcctacaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 20958907  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||||||||||    |||||| |||||| |  ||| |||||||||  | |||| | |    
T  20958906 -tttacacctttctgctcaaactaacactttagtacccctaaagctagatgagactttctttacaatttgtat-ggaggttgaatgatatagatcagaca 20958809  T
Q  196 agataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--attt 292  Q
    ||| ||||| | ||   ||  ||||||||||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  ||||    
T  20958808 agagaagaatggaggttgagatttatctttt-aaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatattt 20958710  T
Q  293 ttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||||| ||||||||||||||||||||    
T  20958709 ttgctaaagcttc-aaacactcttatgttgtttt 20958677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 136 - 316
Target Start/End: Original strand, 20904128 - 20904306
Alignment:
Q  136 ccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagataagaaggaagagagaagtttatcttttc-gaaagat 234  Q
    |||||| ||||||||||||||||| |||||||| ||||||| |||||||||||||| | |||  ||||| ||||| |  ||||||||||||  |||||||    
T  20904128 ccctaatgctagatgagactttacaatttgtttgtgagtttaaatgattgaaatcagacaagggaagaaagaagata--agtttatcttttatgaaagat 20904225  T
Q  235 aagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaatttttgctaaagcttcaaaacactctt 316  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||| ||||    
T  20904226 aagagagaattgatttacacttttaa-gacttcttggaatctttgtgatgatcaattttttctaaagcttcaaaacaatctt 20904306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 19547719 - 19548049
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||| ||| ||||||||||||||||||||| |||||||||| || |||||||| ||  ||| || |||||||  ||||||| |||||||||| |||||||    
T  19547719 tcctacactttacaaccttgttcacctgaacaattacaacaactatattctcttagtctcagcaggcttacacctttcttgctaagttacccacttagac 19547818  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagac----tttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     ||||||||||| ||||||||||| ||||| |||  |||||||||||||||||||    ||||| |||  | |  |||||||||||||  | |||| | |    
T  19547819 -tttacacctttctgctcaaactaacactttagtacccctaaagctagatgagactttgtttacaattaatat-ggagtttgaatgatatagatcagaga 19547916  T
Q  196 agataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--ttt 292  Q
    ||| | | | | || ||||  |||||| |||  |||||||||||| | ||||||| |||||||| ||||||||||  ||||||||||||||||||  |||    
T  19547917 agagagggatggagggagagatttatc-tttaaaaagataagagaaatattgattcacacttttgaagacttcttggaatctttgtgatgatcaatgttt 19548015  T
Q  293 ttgctaaagcttcaaaacactcttatgttgttttt 327  Q
    ||||||||||||| |||||||||||||||||||||    
T  19548016 ttgctaaagcttc-aaacactcttatgttgttttt 19548049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 326
Target Start/End: Complemental strand, 36317069 - 36316815
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||||||||||  ||||| |||| ||||| |||  |||||||||||||||||||||||| |  |||||  |||||    
T  36317069 ttcttgctaagttacccacttagacttttacaccttcagctcagactaacactttagtacccctaaagctagatgagactttacaagatgtttg-gagtt 36316971  T
Q  176 tgaatgattga-aatcataaaagataagaagga---agagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttc 270  Q
    |||||| |||| || || | |  | |||||| |   || |||||||||||||||   |||||||||||||| |||||||||||||||| ||||||||||     
T  36316970 tgaatgtttgagaaacaaacagaagaagaagaatggagggagaagtttatctttaa-aaagataagagagatattgatttacacttttgaagacttcttg 36316872  T
Q  271 aaatctttgtgatgatca--atttttgctaaagcttcaaaacactcttatgttgtttt 326  Q
     |||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  36316871 gaatctttgtgatgatcaatatttttgctaaagcttc-aaacactcttatgttgtttt 36316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 23376235 - 23376495
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagt----taccccctt 96  Q
    ||||||||||||||| |||||||| ||||| || ||||||| |||||||||||||||||||||| |||| | |  |||||| |||||    ||||| |||    
T  23376235 tcctgcaccttacaatcttgttcagctgaacaagtacaacaactgtattctctaagcgtcaacaggcttgc-tccttcttgctaagttacgtacccactt 23376333  T
Q  97 agacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaa 196  Q
    ||||||||||| | ||| ||||||||| |||||  ||   |||||| |||||||||||||||| ||||||||  |||||||||||||| |||||| | ||    
T  23376334 agacttttacaacctttactcaaactaacactttggtactcctaaatctagatgagactttacaatttgttt-ggagtttgaatgattaaaatcagacaa 23376432  T
Q  197 g---ataagaaggaagagagaagtttatcttttcgaaagataagagagaattgatttacacttt 257  Q
    |   | ||||| | || | |||||||||| ||| | ||||||||||||||||||||||||||||    
T  23376433 gagaaaaagaatggagggggaagtttatc-tttagcaagataagagagaattgatttacacttt 23376495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 36317232 - 36317076
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||  || ||||||||||||||| ||| || |||| ||| || |||| |||||||||| ||||||    
T  36317232 tcctgcaccttacaatctttgttcacctgaacaattacgccaactgtattctctaagcctcagcaggcttgcatctt-cttgctaagttacccacttaga 36317134  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| ||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  36317133 cttttacaacttctgctcaaactatcactttagtacccctaaagctagatgagacttt 36317076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 4037450 - 4037605
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  4037450 tcctgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 4037547  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  4037548 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 4037605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 21682972 - 21682846
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| |||||| |||| ||   |||||| ||||||| || |||||||    
T  21682972 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcaacaggcttgca-ccttcttgctaagttaaccacttagac 21682875  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  21682874 ttttacaacctttgctcaacctaacactt 21682846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 37537942 - 37538069
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  37537942 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 37538040  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  37538041 tgaatgattgaaatcagacaagagaagaa 37538069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 37647053 - 37647180
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  37647053 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 37647151  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  37647152 tgaatgattgaaatcagacaagagaagaa 37647180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 27273654 - 27273807
Alignment:
Q  3 ctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagact 101  Q
    ||||||||||||| ||| ||||||||||| ||||||||    |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||||    
T  27273654 ctgcaccttacaatctttgttcacctgaacaattacaattt-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttagact 27273751  T
Q  102 tttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| | ||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  27273752 tttacaacctttgctcaaactaacactttagtatccctaaagctagatgagacttt 27273807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 11410385 - 11410540
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  11410385 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 11410482  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  11410483 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 11410540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18391019 - 18390864
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  18391019 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 18390922  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  18390921 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 18390864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 22172723 - 22172878
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  22172723 tcctgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 22172820  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||| ||||    
T  22172821 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgaggcttt 22172878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 26191299 - 26191454
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  26191299 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 26191396  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  26191397 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 26191454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 27412933 - 27412778
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  27412933 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 27412836  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  27412835 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 27412778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 31917597 - 31917442
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  31917597 tcctgcaccttacaaactttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 31917500  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||| ||| ||||| |||  ||||||||||||||||||||||    
T  31917499 cttttacaacctttgctcaacctaacactttagtacccctaaagctagatgagacttt 31917442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 33940105 - 33939950
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  33940105 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 33940008  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  33940007 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 33939950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 33950505 - 33950350
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  33950505 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 33950408  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  33950407 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 33950350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 18208733 - 18208859
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  18208733 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 18208830  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  18208831 ttttacaacctttgctcaacctaacactt 18208859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 18218071 - 18218197
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  18218071 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 18218168  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  18218169 ttttacaacctttgctcaacctaacactt 18218197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 19887409 - 19887536
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  | |||||||||||||||||||||| |  |||||   || |    
T  19887409 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacctctaaagctagatgagactttacaagatgttt-gaagct 19887507  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  19887508 tgaatgattgaaatcagacaagagaagaa 19887536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 26201881 - 26202007
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  26201881 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 26201978  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  26201979 ttttacaacctttgctcaacctaacactt 26202007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 30942760 - 30942916
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  30942760 tcctgcaccttacaatccttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 30942857  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  30942858 cttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 30942916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 30952182 - 30952338
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  30952182 tcctgcaccttacaatccttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 30952279  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  30952280 cttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 30952338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 8764641 - 8764796
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| |||||||  | |||||||    
T  8764641 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaatcacttagac 8764738  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  8764739 ttttacaacctttgctcaacctaacactttagaacctctaaaagctagatgagacttt 8764796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 13571150 - 13571305
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||||||||||| || ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  13571150 tcctgcaccttataatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 13571247  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||| ||||||||| ||||| |||  ||||||||||||||||||||||    
T  13571248 cttttacaacctttactcaaactaacactttagtacccctaaagctagatgagacttt 13571305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18362062 - 18361907
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| ||||||||||| || ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  18362062 tcctgcaccttacaatcttgttcacctaaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 18361965  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  18361964 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 18361907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 32071225 - 32071070
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  32071225 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcatgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 32071128  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  32071127 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 32071070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 37537854 - 37537935
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  37537854 ttcttgctaagttacccacttagactttttctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 37537935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 37646965 - 37647046
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  37646965 ttcttgctaagttacccacttagactttttctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 37647046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 37818384 - 37818229
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  37818384 tcctgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 37818287  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||| ||||||||| ||||| |||   |||||||||||||||||||||    
T  37818286 cttttacaacctttactcaaactaacactttagtacgcctaaagctagatgagacttt 37818229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 37298366 - 37298440
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| || |||||||||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  37298366 taagttaaccacttagacttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 37298440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 37537691 - 37537843
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||| ||| ||  ||| ||   || ||| ||||||| || ||||||    
T  37537691 tcctgcaccttacattccttgttcacctgaacaattacaacatctgtattctctaagcctcagcagacttgca-ccttgttgctaagttaaccacttaga 37537789  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  | ||||||||||||||||    
T  37537790 cttttacaaactcagctcaaactaacactttagtacctctaaagctagatgaga 37537843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 37646802 - 37646954
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||| ||| || |||| ||   || ||| ||||||| || ||||||    
T  37646802 tcctgcaccttacattccttgttcacctgaacaattacaacatctgtattctctaagcctcagcaggcttgca-ccttgttgctaagttaaccacttaga 37646900  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  ||| |||||| ||||| |||  | ||||||||||||||||    
T  37646901 cttttacaaactcagcttaaactaacactttagtacctctaaagctagatgaga 37646954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 19887159 - 19887310
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  19887159 tcctgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 19887256  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  19887257 cttttacaaactcagctcaaactaacactttagtacccctaaagctagatgaga 19887310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 21754320 - 21754169
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  21754320 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 21754223  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  21754222 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 21754169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 21763607 - 21763456
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  21763607 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 21763510  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  21763509 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 21763456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 34130041 - 34130115
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| || |||||||||||||| | ||||||||||||| ||||| |||   |||||||||||| ||||||||    
T  34130041 taagttaaccacttagacttttacaacctttgctcaaactaacactttagtactcctaaagctagaggagacttt 34130115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 19887321 - 19887402
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||| ||| ||||||||||| | |||| ||||||||||| ||||| ||   | ||||||||||||||||||||    
T  19887321 ttcttgctaagttgcccacttagacttttgctccttctgctcaaactaacactttagcacctctaaagctagatgagacttt 19887402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 22245234 - 22245151
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttac 159  Q
    |||||| |||||||||| ||||||||||||||   |  |||||||||| ||||| |||  ||||||||||| |||||| |||||    
T  22245234 ttcttgctaagttacccacttagacttttacaaactcagctcaaactaacactttagtacccctaaagctatatgagattttac 22245151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 27578630 - 27578683
Alignment:
Q  4 tgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagc 57  Q
    |||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||    
T  27578630 tgcaccttacaatctttgttcacctgaacaattacaac-cctgtattctctaagc 27578683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 205018 - 205091
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactt 156  Q
    ||||||| || |||||| |||||||   ||||||||| ||| ||||| |||  |||||||||||||||||||||    
T  205018 taagttaaccacttagaattttacaatctttgctcaagctaacactttagtacccctaaagctagatgagactt 205091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 20807941 - 20807868
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactt 156  Q
    ||||||| || ||||||||||||||   |||| |||| ||| ||||| |||  |||||||||||||||||||||    
T  20807941 taagttaaccacttagacttttacaatctttgttcaagctaacactttagtacccctaaagctagatgagactt 20807868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 21754155 - 21754102
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  21754155 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 21754102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 21763442 - 21763389
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  21763442 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 21763389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 42090058 - 42090131
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactt 156  Q
    ||||||| || ||||||||||||||   ||||||||| ||| ||||| |||  ||| |||||||||||||||||    
T  42090058 taagttaaccacttagacttttacaatctttgctcaagctaacactttagtaccccaaaagctagatgagactt 42090131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 5 - 326
Target Start/End: Original strand, 39855 - 40176
Alignment:
Q  5 gcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactttt 104  Q
    ||||||||||| |||||||||||||| |||||||| | || |||||||||||| ||||||||||||||  ||||||| |||||||||| ||||||| |||    
T  39855 gcaccttacaatcttgttcacctgaacaattacaataactatattctctaagcctcaacatgcttacacctttcttgctaagttacccacttagac-ttt 39953  T
Q  105 acaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagataaga 203  Q
    |||||||| ||||||||| | ||||| | |  |||||||||||||||||||||||| |||||||| ||||||||||||||||||||   | |||| ||||    
T  39954 acacctttctgctcaaaccaacactttaatacccctaaagctagatgagactttacaatttgtttgtgagtttgaatgattgaaatatgacaagagaaga 40053  T
Q  204 aggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--tttttgctaaa 300  Q
    | |||| ||||  |||||| |||  |||||||||||| | ||||||  |||| |||||| |||||||  ||||||||||| ||||||  |||||||||||    
T  40054 atgaagggagatatttatc-tttaaaaagataagagaaatattgatacacacgtttaaatacttcttggaatctttgtga-gatcaatgtttttgctaaa 40151  T
Q  301 gcttcaaaacactcttatgttgtttt 326  Q
    ||||| ||||||||||||||||||||    
T  40152 gcttc-aaacactcttatgttgtttt 40176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 11459924 - 11459589
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||| | |||||  |||||||||| || |||||||||| ||||||||||||||| ||| || |||| ||  || |||| |||||||||| |||| ||    
T  11459924 tcctgcatcctacaatattgttcacctaaacaattacaacaactgtattctctaagcctcagcaggcttgcacctt-cttgctaagttacccgcttacac 11459826  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt----accatttgtttatgagtttgaatgattgaaatcataaaa 196  Q
    |||||||| |||||||||||||| ||||| |||  ||||||||||| ||||||||||    || ||||||||  ||||||||||||||||||||| | ||    
T  11459825 ttttacactttttgctcaaactaacactttagtacccctaaagctatatgagactttctttacaatttgtttg-gagtttgaatgattgaaatcagacaa 11459727  T
Q  197 gataagaagga---agagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaat-tt 292  Q
    || |||||| |   || |||| ||||||||||   || |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||    
T  11459726 gagaagaagaatggagggagaggtttatctttaa-aatgataagagagaattgatttacacttttaaagacttctagaaatctttgtgatgatcaatttt 11459628  T
Q  293 ttgctaaagcttcaaaacactcttatgttgtttttcttg 331  Q
    |||||||| ||||| |||| | |||||||||||||||||    
T  11459627 ttgctaaatcttcacaacattattatgttgtttttcttg 11459589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 326
Target Start/End: Original strand, 49386660 - 49386989
Alignment:
Q  4 tgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttt 103  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| ||||||||||    
T  49386660 tgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaagcttacacctttcttgctaagttacccacttagacttt 49386759  T
Q  104 tacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga-----ctttaccatttgtttatgagtttgaatgattgaaatcataaaag 197  Q
    ||||||||| ||||||||||| ||||| |||  ||||||||||||||||||     |||||| |||||| |    |||||||||||  | |||| | |||    
T  49386760 tacacctttatgctcaaactaacactttagtacccctaaagctagatgagacttttctttacaatttgtatggaggtttgaatgatatagatcagacaag 49386859  T
Q  198 ataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--attttt 294  Q
    | ||||| | ||   ||  |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  ||||||    
T  49386860 agaagaatggaggttgagatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatattttt 49386958  T
Q  295 gctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||| ||||||||||||||||||||    
T  49386959 gctaaagcttc-aaacactcttatgttgtttt 49386989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 24872501 - 24872830
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  24872501 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 24872600  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||||||||||    |||||| |||||| |  ||| |||||||||  | |||| | |    
T  24872601 -tttacacctttctgctcaaactaacactttagtacccctaaagctagatgagactttctttacaatttgtat-ggaggttgaatgatatagatcagaca 24872698  T
Q  196 agataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--attt 292  Q
    ||| ||||| | ||   ||  |||||| |||  ||||||| |||||| |||||||||||||||| ||||||||||  |||||||||||||||||  ||||    
T  24872699 agagaagaatggaggttgagttttatc-tttgaaaagatatgagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatattt 24872797  T
Q  293 ttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||||| ||||||||||||||||||||    
T  24872798 ttgctaaagcttc-aaacactcttatgttgtttt 24872830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 24794223 - 24793894
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  24794223 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattatcttagcctcatcaggcttacacctttcttgctaagttacccacttagac 24794124  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagac----tttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     |||||||||||  |||||||||| ||||| |||  | |||||||||||||| ||    ||||| |||||| |  |||||||||||||  | |||| | |    
T  24794123 -tttacacctttcagctcaaactaacactttagtacctctaaagctagatgatactttgtttacaatttgtat-ggagtttgaatgatatagatcagaca 24794026  T
Q  196 agataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--ttt 292  Q
    ||| ||||| | || ||||  |||||| |||  |||||||||||| | |||||||||||||||| ||||||||||  ||||||||||||||||||  |||    
T  24794025 agagaagaatggagggagagatttatc-tttaaaaagataagagaaatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatgttt 24793927  T
Q  293 ttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||||| ||||||||||||||||||||    
T  24793926 ttgctaaagcttc-aaacactcttatgttgtttt 24793894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 19036193 - 19036037
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||| |||||||||||||||||| |||||| |||||||||| ||||||||||| ||| ||| || |||||||||||||||| |||||||||| |||||||    
T  19036193 tcctacaccttacaaccttgttcgcctgaacaattacaacaactgtattctcttagcctcatcaggcttacatttttcttgctaagttacccacttagac 19036094  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||| ||||||||||    
T  19036093 -tttacacctttctgctcaaactaacactttagtacccctaaagctatatgagacttt 19036037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 17734924 - 17734768
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||| |||||||||||||||||| |||||| |||||||||| ||||||||||| ||| ||| || |||||||| ||||||| |||||||||| |||||||    
T  17734924 tcctacaccttacaaccttgttcgcctgaacaattacaacaactgtattctcttagcctcaccaggcttacatatttcttgctaagttacccacttagac 17734825  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||| ||||||||||    
T  17734824 -tttacacctttctgctcaaactaacactttagtacccctaaagctatatgagacttt 17734768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 2488402 - 2488529
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  2488402 ttcttgctaagttaccctcttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 2488500  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  2488501 tgaatgattgaaatcagacaagagaagaa 2488529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 2488154 - 2488303
Alignment:
Q  4 tgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||| || |||| ||   || ||| ||||||| || |||||||||    
T  2488154 tgcaccttacaatccttgttcacctgaacaattacaacaactgtattctctaagcctcagcaggcttgca-ccttgttgctaagttaaccacttagactt 2488252  T
Q  103 ttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  2488253 ttacaaactcagctcaaactaacactttagtacccctaaagctagatgaga 2488303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 11267 - 11422
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  11267 tcctgcaccttacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 11364  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
     ||||||| | ||||||||| ||| ||||| |||  ||||||||||||||||||||||    
T  11365 tttttacaacctttgctcaagctaacactttagtacccctaaagctagatgagacttt 11422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 4023406 - 4023557
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| |||||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  4023406 tcctgcaccttacaatctttgttcacctgaataattacaac-cctgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 4023503  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||||| | ||| ||||||||| ||||| |||  |||||||| |||||||||    
T  4023504 cttttacaacctttactcaaactaacactttagtacccctaaagttagatgaga 4023557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 5654906 - 5655061
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  5654906 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 5655003  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  5655004 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 5655061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 8973631 - 8973476
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  8973631 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 8973534  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  8973533 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 8973476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 8984186 - 8984031
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  8984186 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 8984089  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  8984088 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 8984031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 9537920 - 9537765
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  9537920 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 9537823  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  9537822 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 9537765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 9548246 - 9548091
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  9548246 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 9548149  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  9548148 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 9548091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 16334696 - 16334851
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  16334696 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 16334793  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  16334794 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 16334851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 19827509 - 19827664
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  19827509 tcctgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 19827606  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  |||||||| |||||||||||||    
T  19827607 cttttacaacctttgctcaaactaacactttagtacccctaaagttagatgagacttt 19827664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 25433895 - 25433739
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||||||||||||||| ||||||||||  |||||||||||||| ||| || |||| ||    | ||| |||||||||| |||| |    
T  25433895 tcctgcaccttacaatccttgttcacctgaacaattacaacaattgtattctctaagcctcagcaggcttgca-ccctgttgctaagttacccacttaaa 25433797  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||||||    
T  25433796 cttttacaaactcagctcaaactaacactttagtacccctaaagctagatgagacttt 25433739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 51977926 - 51978007
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||||| |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  51977926 ttcttgctaagttacccacttagacttttactccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 51978007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 20744237 - 20744364
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| ||| |||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  20744237 ttcttgctaatttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 20744335  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  20744336 tgaatgattgaaatcagacaagagaagaa 20744364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 204
Target Start/End: Original strand, 51978022 - 51978141
Alignment:
Q  84 aagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgat 183  Q
    ||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |||||||||    
T  51978022 aagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagcttgaatgat 51978120  T
Q  184 tgaaatcataaaagataagaa 204  Q
    |||||||| | |||| |||||    
T  51978121 tgaaatcaaacaagagaagaa 51978141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 2488314 - 2488395
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  2488314 ttcttgctaagttacccacttagacttttgctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 2488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6433519 - 6433364
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || | || ||   |||||| ||||||| || |||||||    
T  6433519 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggattgca-ccttcttgctaagttagccacttagac 6433422  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  6433421 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 6433364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 10507948 - 10508103
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||| ||||||||| ||| ||||||||||| ||||||||| |||||||||||||||| |||||| |  | ||  || |||  |||||||||| ||||||    
T  10507948 tcctgaaccttacaatctttgttcacctgaacaattacaac-cctgtattctctaagcctcaacaggtctgcacctt-cttactaagttacccacttaga 10508045  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | |||||||||| || ||||| |||   ||||||| |||||||||||||    
T  10508046 cttttacaacctttgctcaaattaacactttagtaagcctaaagttagatgagacttt 10508103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 13118990 - 13119098
Alignment:
Q  95 ttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
    |||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |||||||||||||||||||     
T  13118990 ttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagcttgaatgattgaaatcatac 13119088  T
Q  195 aagataagaa 204  Q
    |||| |||||    
T  13119089 aagagaagaa 13119098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 20744149 - 20744230
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  20744149 ttcttgctaagttacccacttagactttttctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 20744230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 4781975 - 4782102
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||| ||| ||||||||||| | |||| ||||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  4781975 ttcttgctaagttgcccacttagacttttgctccttctgctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 4782073  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  4782074 tgaatgattgaaatcagacaagagaagaa 4782102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 25433732 - 25433605
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| |||||| |||| |||||||  ||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  25433732 ttcttgctaagttacccacttagagttttgcacctttacctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 25433634  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  25433633 tgaatgattgaaatcagacaagagaagaa 25433605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 1684531 - 1684686
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  | |||||||||||||| ||  || |||| ||   |||||| ||||||| || |||||||    
T  1684531 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcttgtattctctaagcctcggcaggcttgca-ccttcttgctaagttaaccacttagac 1684628  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  1684629 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 1684686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6423092 - 6422937
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||| ||||||| |||||||||| ||| ||||||| | |||||||||||||||| ||| || |||| ||  || |||| ||||||| || |||||||    
T  6423092 tcctgcagcttacaatcttgttcaccagaacaattaca-ctcctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttagccacttagac 6422995  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  6422994 ttttacaacatttgctcaacctaacactttaggacctctaaaagctagatgagacttt 6422937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 13118883 - 13118964
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| |  ||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  13118883 ttcttgctaagttacccacttagactttttcttcttctgctcaaactaacactttagtacccctaaagctagatgagacttt 13118964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 10011579 - 10011642
Alignment:
Q  94 cttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||||||||| || |||||||||||| ||||| |||  ||||||||||||||||||||||    
T  10011579 cttagacttttacaactcttgctcaaactaacactttagtacccctaaagctagatgagacttt 10011642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 23503147 - 23503295
Alignment:
Q  4 tgcaccttacaaccttgttcacctgaaaaattac-aacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    |||||||||||| |||||||| ||||| |||||| |||| ||||||||||||||| ||||||  ||||||   |||     ||||||||| ||||||| |    
T  23503147 tgcaccttacaatcttgttcatctgaacaattacaaacaactgtattctctaagcctcaacagacttacaaccttc-----aagttacccgcttagac-t 23503240  T
Q  103 ttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| || | |||||||||  |||| |||  |||||||| |||||||||||||    
T  23503241 ttacactttcttctcaaactaatactttagtacccctaaagatagatgagacttt 23503295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 51977857 - 51977919
Alignment:
Q  95 ttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  51977857 ttagacttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 51977919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 4372325 - 4372174
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  4372325 tcctgcaccatacaatcttcgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 4372228  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  4372227 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 4372174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 4382066 - 4381915
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  4382066 tcctgcaccatacaatcttcgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 4381969  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  4381968 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 4381915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13118720 - 13118777
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagc 57  Q
    |||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  13118720 tcctgcacgttacaatccttgttcacctgaacaattacaacaactgtattctctaagc 13118777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 20492816 - 20492665
Alignment:
Q  1 tcctgcaccttacaaccttg-ttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| |||  |||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  20492816 tcctgcaccttacaaactttattcacctgaacaattacaac-cttgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 20492719  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   ||| ||||||||| ||||| |||  |||||||| |||||||||    
T  20492718 cttttacaatctttactcaaactaacactttagtacccctaaagttagatgaga 20492665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 4781725 - 4781876
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| | ||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  4781725 tcctgcaccttacaatctttgttcacctgaacagttacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 4781822  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  4781823 cttttacaaactcagctcaaactaacactttagtacccctaaagctagatgaga 4781876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 4781887 - 4781968
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||| ||| ||||||||||| | |||| ||||||||||| ||||| ||   | ||||||||||||||||||||    
T  4781887 ttcttgctaagttgcccacttagacttttgctccttctgctcaaactaacactttagcacctctaaagctagatgagacttt 4781968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10507134 - 10507197
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaaca 64  Q
    ||||| ||||||||| ||| ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  10507134 tcctgaaccttacaatctttgttcacctgaacaattacaac-cctgtattctctaagcctcaaca 10507197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 4372067 - 4371985
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  4372067 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 4371985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 4381808 - 4381726
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  4381808 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 4381726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 14801788 - 14801858
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||| || ||||||||||||||   ||||||||| ||| ||||| |||  ||||||||||||||||||    
T  14801788 taagttaaccacttagacttttacaatctttgctcaagctaacactttagtacccctaaagctagatgaga 14801858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 4372160 - 4372107
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  4372160 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 4372107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 4381901 - 4381848
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  4381901 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 4381848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10002705 - 10002761
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagc 57  Q
    ||||||||||||||| ||| ||||||||||| |||||||||  |||||||||||||||    
T  10002705 tcctgcaccttacaatctttgttcacctgaacaattacaac-tctgtattctctaagc 10002761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 6e-59; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 34766143 - 34765812
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  34766143 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 34766044  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga-----ctttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||||||||||     |||||| |||||| |    |||||||||||  | |||| |     
T  34766043 -tttacacctttctgctcaaactaacactttagtacccctaaagctagatgagacttttctttacaatttgtatggaggtttgaatgatatagatcagac 34765945  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | ||   ||| |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  |||    
T  34765944 aagagaagaatggaggttgaaatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatatt 34765846  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  34765845 tttgctaaagcttc-aaacactcttatgttgtttt 34765812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 326
Target Start/End: Complemental strand, 19361598 - 19361355
Alignment:
Q  87 ttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt----accatttgtttatgagtttgaatga 182  Q
    |||||| |||||||||||||||||| || |||||||| ||||| |||  || |||||||||||||||||||    || |||||||| |||||||||||||    
T  19361598 ttacccacttagacttttacaccttatgttcaaactaacactttagtacccataaagctagatgagactttctttacaatttgtttgtgagtttgaatga 19361499  T
Q  183 ttgaaatcataaaagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtg 281  Q
    ||||||||| | |||| || |||| || |||||||||||| |||  |||||||||||| | ||||||  ||||||||| |||||||||  ||||||||||    
T  19361498 ttgaaatcagacaagagaataagggagggagaagtttatc-tttaaaaagataagagaaatattgatacacacttttatagacttcttggaatctttgtg 19361400  T
Q  282 atgatcaa--tttttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    | ||||||  |||||||||||||||| ||||||| ||||||||||||    
T  19361399 a-gatcaatgtttttgctaaagcttc-aaacactattatgttgtttt 19361355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 8562578 - 8562734
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || ||||| |  ||||||| |||||||||| |||||||    
T  8562578 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttatacctttcttgctaagttacccacttagac 8562677  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||| ||||||||||    
T  8562678 -tttacacctttctgctcaaactaacactttagtacccctaaagctatatgagacttt 8562734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 22222758 - 22222914
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||  || ||||||||||||||| ||| || |||| || ||| |||| |||||||||| | ||||    
T  22222758 tcctgcaccttacaatctttgttcacctgaacaattacgccaactgtattctctaagcctcagcaggcttgcacttt-cttgctaagttacccacataga 22222856  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| ||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  22222857 cttttacaacttctgctcaaactaacactttagtacccctaaagctagatgagacttt 22222914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 22248593 - 22248749
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||  || ||||||||||||||| ||| || |||| || ||| |||| |||||||||| | ||||    
T  22248593 tcctgcaccttacaatctttgttcacctgaacaattacgccaactgtattctctaagcctcagcaggcttgcacttt-cttgctaagttacccacataga 22248691  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| ||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  22248692 cttttacaacttctgctcaaactaacactttagtacccctaaagctagatgagacttt 22248749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 24692593 - 24692442
Alignment:
Q  4 tgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttt 103  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||| ||| || |||||||  ||||||| |||||||||  ||||||  ||    
T  24692593 tgcaccttacaaccttgttcacctgaacaattacaacaactgtactctcttagcctcagcaggcttacacctttcttgctaagttacctacttaga-att 24692495  T
Q  104 tacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagact 155  Q
    ||||||||| ||||||||||| ||||| |||  | ||||||||||||||||||    
T  24692494 tacacctttctgctcaaactaacactttagtacctctaaagctagatgagact 24692442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 331
Target Start/End: Original strand, 22222921 - 22223180
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||||||||||  ||||||| || ||||| |||   ||||||||||||||||||||||| |  |||||  || ||    
T  22222921 ttcttgctaagttacccacttagacttttacaccttaagctcaaattaacactttagtactcctaaagctagatgagactttacaagatgtttg-gattt 22223019  T
Q  176 tgaatgattga-aatca--taaaagat-aagaaggaagagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttca 271  Q
    |||||| |||| || ||  || ||||  || || | || |||||||||||||||   ||||||||||||||||||||||||||||  |||||||||||      
T  22223020 tgaatgtttgagaaacaaatagaagaagaataatggagggagaagtttatctttaa-aaagataagagagaattgatttacacttaaaaagacttcttgg 22223118  T
Q  272 aatctttgtgatgatcaa-tttttgctaaagcttcaaaacactctt-atgttgtttttcttg 331  Q
    || ||||||||||||||| ||||||||||| ||||| |||| | ||  ||||||||||||||    
T  22223119 aacctttgtgatgatcaattttttgctaaatcttcacaacaatgttcttgttgtttttcttg 22223180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 331
Target Start/End: Original strand, 22248756 - 22249015
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||||||||||  ||||||| || ||||| |||   ||||||||||||||||||||||| |  |||||  || ||    
T  22248756 ttcttgctaagttacccacttagacttttacaccttaagctcaaattaacactttagtactcctaaagctagatgagactttacaagatgtttg-gattt 22248854  T
Q  176 tgaatgattga-aatca--taaaagat-aagaaggaagagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttca 271  Q
    |||||| |||| || ||  || ||||  || || | || |||||||||||||||   ||||||||||||||||||||||||||||  |||||||||||      
T  22248855 tgaatgtttgagaaacaaatagaagaagaataatggagggagaagtttatctttaa-aaagataagagagaattgatttacacttaaaaagacttcttgg 22248953  T
Q  272 aatctttgtgatgatcaa-tttttgctaaagcttcaaaacactctt-atgttgtttttcttg 331  Q
    || ||||||||||||||| ||||||||||| ||||| |||| | ||  ||||||||||||||    
T  22248954 aacctttgtgatgatcaattttttgctaaatcttcacaacaatgttcttgttgtttttcttg 22249015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 209
Target Start/End: Original strand, 26019936 - 26020068
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  26019936 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaacatgttt-gaagct 26020034  T
Q  176 tgaatgattgaaatcataaaagataagaaggaag 209  Q
    |||||||||||||||| | |||| ||||||||||    
T  26020035 tgaatgattgaaatcagacaagagaagaaggaag 26020068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 231 - 326
Target Start/End: Original strand, 8562771 - 8562869
Alignment:
Q  231 agataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa---tttttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||| | |||||||||||||||| ||||||||||  ||||||||||||||||||   |||||||||||||||| ||||||||||||||||||||    
T  8562771 agataagagaaatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatattttttgctaaagcttc-aaacactcttatgttgtttt 8562869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 9033952 - 9033825
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||| ||||||||||||||| |  ||||| | || |    
T  9033952 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagttagatgagactttacaagatgtttgt-agct 9033854  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  9033853 tgaatgattgaaatcagacaagagaagaa 9033825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 9034201 - 9034047
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||  |||||| ||||||| || ||| ||||||||| | |||||||||||||| ||| || |||| ||  || |||| |||||||||| |||||||    
T  9034201 tcctgcaatttacaatcttgttcgcccgaacaattacaactc-tgtattctctaagcctcagcaggcttgcacctt-cttgctaagttacccacttagac 9034104  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| | ||||||||||||| ||||| |||  | ||||||||||||||||||||    
T  9034103 ttttacaacctttgctcaaactaacactttagtacctctaaagctagatgagacttt 9034047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 30657318 - 30657445
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  30657318 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 30657416  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  30657417 tgaatgattgaaatcagacaagagaagaa 30657445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 3286631 - 3286476
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  3286631 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 3286534  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  3286533 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 3286476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 12455838 - 12455683
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  12455838 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 12455741  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  12455740 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 12455683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 14792387 - 14792232
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  14792387 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 14792290  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  14792289 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 14792232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16898731 - 16898576
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  16898731 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 16898634  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  16898633 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 16898576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18160846 - 18160691
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  18160846 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 18160749  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  18160748 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 18160691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20913067 - 20912912
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  20913067 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 20912970  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  20912969 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 20912912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20968627 - 20968472
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  || | |||||| ||  |||||    
T  20968627 tcctgcaccttacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcaccttgtttct-aagttaaccatttaga 20968530  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  20968529 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 20968472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 24921274 - 24921429
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  24921274 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttagccacttagac 24921371  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  24921372 ttttacaacatttgctcaacctaacactttaggacctctaaaagctagatgagacttt 24921429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 24930310 - 24930465
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  24930310 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttagccacttagac 24930407  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  24930408 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 24930465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 1597693 - 1597566
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| |||||||  ||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  1597693 ttcttgctaagttaccctcttagacttttgcacctttatctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 1597595  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  1597594 tgaatgattgaaatcagacaagagaagaa 1597566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 1597943 - 1597792
Alignment:
Q  2 cctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||| ||| || |||| ||   || ||| ||||||| || |||||||    
T  1597943 cctgcaccttacaatccttgttcacatgaacaattacaacatctgtattctctaagcctcagcaggcttgca-ccttgttgctaagttaaccacttagac 1597845  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  1597844 ttttacaaactcagctcaaactaacactttagtacccctaaagctagatgaga 1597792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 290
Target Start/End: Complemental strand, 18333427 - 18333209
Alignment:
Q  75 tttcttgttaagttacccccttagacttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagac----tttaccatttgttta 169  Q
    ||||||| |||||||||| |||||||||| |||||||| ||||||||||| ||||| |||  |||||||||||||||||||    ||||| |||||| |     
T  18333427 tttcttgctaagttacccacttagacttt-acacctttctgctcaaactaacactttagtacccctaaagctagatgagactttgtttacaatttgtat- 18333330  T
Q  170 tgagtttgaatgattgaaatcataaaagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttct 268  Q
     ||||||||||||   | |||| | |||| ||||| | || ||||  |||||| |||  |||||||||||| | ||||||||| |||||| ||||||| |    
T  18333329 ggagtttgaatgaaatagatcaaacaagagaagaatggagggagagatttatc-tttaaaaagataagagaaatattgatttatacttttgaagactttt 18333231  T
Q  269 tcaaatctttgtgatgatcaat 290  Q
    |  |||||||||||||||||||    
T  18333230 tggaatctttgtgatgatcaat 18333209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31358346 - 31358220
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  31358346 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 31358249  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  31358248 ttttacaacctttgctcaacctaacactt 31358220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31368076 - 31367950
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  31368076 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 31367979  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  31367978 ttttacaacctttgctcaacctaacactt 31367950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 790462 - 790545
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttac 159  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||| |||||||    
T  790462 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgaaactttac 790545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 1597781 - 1597700
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  1597781 ttcttgctaagttacccacttagacttttgctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 1597700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 324
Target Start/End: Complemental strand, 15504218 - 15503902
Alignment:
Q  4 tgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    |||||||||||| ||| ||||| ||||| ||||||||||| | |||||||||||| ||| || |||| ||  || |||| ||||||| || |||||||||    
T  15504218 tgcaccttacaatctttgttcagctgaacaattacaacacatatattctctaagcctcagcaggcttccacctt-cttgctaagttatccacttagactt 15504120  T
Q  103 ttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagataag 202  Q
    |||||   ||| || |||||| ||||| |||  || ||||||||||||||| ||||| |||||  ||||  ||||||||||| |||||| | |||| ||     
T  15504119 ttacaaactttccttaaactaacactttagtacccttaaagctagatgaga-tttacaatttg--tatggatttgaatgattaaaatcagacaaga-aaa 15504024  T
Q  203 aaggaagagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaattt--ttgctaaa 300  Q
    || | || ||||| |||||| ||||   |||||| ||| |||||||||||||| | | |||    || ||||||  ||||||||||||||   |||||||    
T  15504023 aatggagggagaa-tttatc-tttcactagataaaagataattgatttacactataagagagaatttgaaatctcagtgatgatcaatttagatgctaaa 15503926  T
Q  301 gcttcaaaacactcttatgttgtt 324  Q
    ||||||||||| ||||| ||||||    
T  15503925 gcttcaaaacaatcttaagttgtt 15503902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16909384 - 16909229
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||| ||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  16909384 tcctgcaccttacaatcttgtttacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 16909287  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  16909286 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 16909229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18170658 - 18170503
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  18170658 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcttgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 18170561  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  18170560 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 18170503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 18202082 - 18202001
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||| ||||| ||||||| || ||||||| ||||| ||| |||||||||||||||||||||||    
T  18202082 ttcttgctaagttacccacttagtcttttgcacctttagcccaaactaacactttagtatccctaaagctagatgagacttt 18202001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 27786786 - 27786933
Alignment:
Q  4 tgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttt 103  Q
    ||||||||||||  ||||||||||||| | |||||||   |||||||||||||| ||| || |||| ||  |||  || |||||||||| ||||||||||    
T  27786786 tgcaccttacaatattgttcacctgaacacttacaacgattgtattctctaagcctcagcaggcttgcaccttt--tgctaagttacccacttagacttt 27786883  T
Q  104 tacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
     ||| | ||||||||||||| || || |||  ||||||||||| ||||||    
T  27786884 cacaacatttgctcaaactaacaatttagtacccctaaagctatatgaga 27786933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 790300 - 790455
Alignment:
Q  1 tcctgcaccttacaacct-tgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||||||||||||||  | || ||||||||| | ||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  790300 tcctgcaccttacaatttgtgctcacctgaacacttacaactc-tgtattctctaagcctcagcaggcttgcaacttg-ttgctaagttaaccacttaga 790397  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||||   ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  790398 cttttacaatctttgctcaaactaacactttagtacccctaaagctagatgagacttt 790455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 9034040 - 9033967
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagat 149  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  ||||||||||||||    
T  9034040 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagat 9033967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 18202170 - 18202089
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||  ||| | ||||||||| ||||| |||  ||||||||||||||||||||||    
T  18202170 ttcttgctaagttacccacttagacttttacttcttcttctcaaactaacactttagtacccctaaagctagatgagacttt 18202089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 29541231 - 29541076
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  29541231 tcctgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 29541134  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| | | |||||| |||||| ||||| |||  |||||||| ||||| |||||||    
T  29541133 cttttagaacctttgcttaaactaacactttagtacccctaaagttagataagacttt 29541076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 30657156 - 30657307
Alignment:
Q  1 tcctgcaccttacaacct-tgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||||||||||||||  | |||||||||||| | ||||||| |||||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  30657156 tcctgcaccttacaatatgtgttcacctgaacacttacaac-cctgtattctctaagcctcagcacgcttgcaccttg-ttgctaagttaaccacttaga 30657253  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  30657254 cttttacaaactcagctcaaactaacactttagtacccctaaagctagatgaga 30657307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 26169200 - 26169046
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| || ||||| |||||| | ||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  26169200 tcctgcaccttacaatccgtgttctcctgaacacttacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 26169103  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactt 156  Q
    ||||||||   ||||||||| ||| ||||| |||  |||||||||||||||||||||    
T  26169102 cttttacaatctttgctcaagctaacactttagtacccctaaagctagatgagactt 26169046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 26019686 - 26019837
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| | ||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  26019686 tcctgcaccttacaatctttgttcacctgaacagttacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 26019783  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  26019784 cttttacaaactcagctcaaactaacactttagtacccctaaagctagatgaga 26019837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 26019848 - 26019929
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||| ||| ||||||||||| | |||| ||||||||||| ||||| ||   | ||||||||||||||||||||    
T  26019848 ttcttgctaagtttcccacttagacttttgctccttctgctcaaactaacactttagcacctctaaagctagatgagacttt 26019929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28093412 - 28093359
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaag 56  Q
    ||||||||||||||| |||||||||||||| || ||||  ||||||||||||||||    
T  28093412 tcctgcaccttacaatcttgttcacctgaacaactaca--acctgtattctctaag 28093359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 16322089 - 16321953
Alignment:
Q  18 ttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttttacaccttttgctc 117  Q
    ||||||||||||| ||||||||    |||||||||||||| |||||| |||| ||  ||  ||| ||||||| || ||||||||||||||   |||||||    
T  16322089 ttgttcacctgaacaattacaatta-tgtattctctaagcctcaacaggcttgcaccttg-ttgctaagttaaccacttagacttttacaatatttgctc 16321992  T
Q  118 aaactagcacttcagtgtccctaaagctagatgagactt 156  Q
    || ||| ||||| |||   |||||||||||||| |||||    
T  16321991 aagctaacactttagtactcctaaagctagatgtgactt 16321953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 16334237 - 16334101
Alignment:
Q  18 ttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttttacaccttttgctc 117  Q
    ||||||||||||| ||||||||    |||||||||||||| |||||| |||| ||  ||  ||| ||||||| || ||||||||||||||   |||||||    
T  16334237 ttgttcacctgaacaattacaatta-tgtattctctaagcctcaacaggcttgcaccttg-ttgctaagttaaccacttagacttttacaatatttgctc 16334140  T
Q  118 aaactagcacttcagtgtccctaaagctagatgagactt 156  Q
    || ||| ||||| |||   |||||||||||||| |||||    
T  16334139 aagctaacactttagtactcctaaagctagatgtgactt 16334101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0764 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 54 - 385
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  54 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 153  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga-----ctttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     |||| |||||| ||||||||||| ||||| |||  ||||||||||||||||||     |||||| |||||| |    |||||||||||  | |||| |     
T  154 -tttatacctttctgctcaaactaacactttagtacccctaaagctagatgagacttttctttacaatttgtatggaggtttgaatgatatagatcagac 252  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | ||   ||| |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  |||    
T  253 aagagaagaatggaggttgaaatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatatt 351  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  352 tttgctaaagcttc-aaacactcttatgttgtttt 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 6555 - 6224
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  6555 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 6456  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga-----ctttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     |||| |||||| ||||||||||| ||||| |||  ||||||||||||||||||     |||||| |||||| |    |||||||||||  | |||| |     
T  6455 -tttatacctttctgctcaaactaacactttagtacccctaaagctagatgagacttttctttacaatttgtatggaggtttgaatgatatagatcagac 6357  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | ||   ||| |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  |||    
T  6356 aagagaagaatggaggttgaaatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatatt 6258  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  6257 tttgctaaagcttc-aaacactcttatgttgtttt 6224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 20712 - 20381
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  20712 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 20613  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga-----ctttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     |||| |||||| ||||||||||| ||||| |||  ||||||||||||||||||     |||||| |||||| |    |||||||||||  | |||| |     
T  20612 -tttatacctttctgctcaaactaacactttagtacccctaaagctagatgagacttttctttacaatttgtatggaggtttgaatgatatagatcagac 20514  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | ||   ||| |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  |||    
T  20513 aagagaagaatggaggttgaaatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatatt 20415  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  20414 tttgctaaagcttc-aaacactcttatgttgtttt 20381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10337 - 10235
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  10337 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 10238  T
Q  101 ttt 103  Q
    |||    
T  10237 ttt 10235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 521472 - 521803
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  521472 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 521571  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga-----ctttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     ||||||||||| ||||||||||| ||||| |||  ||||||||||||||||||     |||||| |||||| |    |||||||||||  | |||| |     
T  521572 -tttacacctttctgctcaaactaacactttagtacccctaaagctagatgagacttttctttacaatttgtatggaggtttgaatgatatagatcagac 521670  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | ||   ||  |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  |||    
T  521671 aagagaagaatggaggttgagatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatatt 521769  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  521770 tttgctaaagcttc-aaacactcttatgttgtttt 521803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 17420578 - 17420907
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  17420578 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 17420677  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     ||||||||||| | ||||||||| ||||| |||  ||||||||||||||||||    |||||| |||||| |  |||||||||||||  | |||| | |    
T  17420678 -tttacacctttctactcaaactaacactttagtacccctaaagctagatgagactttctttacaatttgtat-ggagtttgaatgatatagatcagaca 17420775  T
Q  196 agataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--attt 292  Q
    ||| ||||| | ||   ||  |||||| |||  |||||||||||||| ||||||||| |||||| ||||||||||  |||||||||||||||||  ||||    
T  17420776 agagaagaatggaggttgagatttatc-tttgaaaagataagagagatattgatttatacttttgaagacttcttggaatctttgtgatgatcaatattt 17420874  T
Q  293 ttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||||| ||||||||||||||||||||    
T  17420875 ttgctaaagcttc-aaacactcttatgttgtttt 17420907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 6 - 331
Target Start/End: Original strand, 6405109 - 6405440
Alignment:
Q  6 caccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactttta 105  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||||| ||| ||  ||| ||  || |||| |||||||||| ||||||||||||    
T  6405109 caccttacaatcttgttcacctgaaaaattacaacaattgtattctctaagcctcagcaatcttgcacctt-cttgctaagttacccacttagactttta 6405207  T
Q  106 caccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt----accatttgtttatgagtttgaatgattgaaatcataaaagataa 201  Q
    || ||| |||||||| || ||||| | |  ||||||||||||||||||||||    || | ||||||| |||||||||||||| |||||| | || | ||    
T  6405208 caacttctgctcaaaataacactttaatacccctaaagctagatgagactttgtttacaacttgttta-gagtttgaatgattaaaatcagacaaaagaa 6405306  T
Q  202 gaagga---agagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--tttttgc 296  Q
    |||| |   || |||||||||||||||   |||||||||||| |||||||||||||||| ||||||||||| ||||||| || ||||||||  |||||||    
T  6405307 gaagaatggagggagaagtttatctttaa-aaagataagagataattgatttacactttaaaagacttcttgaaatcttagttatgatcaatttttttgc 6405405  T
Q  297 taaagcttcaaaacactcttatgttgtttttcttg 331  Q
    ||||| |||| |||||| || ||||||||||||||    
T  6405406 taaagtttcacaacacttttctgttgtttttcttg 6405440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 3 - 282
Target Start/End: Complemental strand, 8841967 - 8841685
Alignment:
Q  3 ctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    |||||| |||||| |||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||||    
T  8841967 ctgcactttacaatcttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagactt 8841868  T
Q  103 ttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataaaaga 198  Q
    ||||||||| ||||||||||| ||||| |||  |||| |||||||||||||    |||||| ||||||||   |||||||||||||||||||| | ||||    
T  8841867 ttacaccttctgctcaaactaacactttagtacccct-aagctagatgagactttctttacaatttgtttgaaagtttgaatgattgaaatcagacaaga 8841769  T
Q  199 taagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtga 282  Q
      |||| | || |||||||||||| |||  |||||||||||||| ||||||| ||||||||||||| |||||  |||||||||||    
T  8841768 gtagaatggagggagaagtttatc-tttaaaaagataagagagatattgattcacacttttaaagatttcttggaatctttgtga 8841685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 256
Target Start/End: Original strand, 13792314 - 13792566
Alignment:
Q  4 tgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttt 103  Q
    |||||||||||| ||||||||||||||||||||||| |  |||||||||||||| ||| || |||| ||  || |||  |||||||||| ||||||||||    
T  13792314 tgcaccttacaatcttgttcacctgaaaaattacaaaaaatgtattctctaagcctcagcaggcttgcacctt-ctttctaagttacccacttagacttt 13792412  T
Q  104 tacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaag---ata 200  Q
    || | ||| ||||||||||| ||||| |||  |||||||| ||||||||||||||| || |||||  ||| |||||||||| |||||| | |||   |||    
T  13792413 tataacttctgctcaaactaacactttagtacccctaaagttagatgagactttacaatatgttt-ggagattgaatgattaaaatcagacaagagaata 13792511  T
Q  201 agaaggaagagagaagtttatcttttcgaaagataagagagaattgatttacactt 256  Q
    |||| | || | |||||||||| |||   |||||||||||||||||||||||||||    
T  13792512 agaatggagggggaagtttatc-tttaacaagataagagagaattgatttacactt 13792566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 26459205 - 26458875
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||| ||| |  |||||||  |||  || |||||||||| |||||||    
T  26459205 tcctgcaccttacaaccttgttcacctgaacaattacaacaacagtattctcttagcctcatcgggcttacacctttaatgctaagttacccacttagac 26459106  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagt-gtccctaaagctagatgagac----tttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     ||||||||||| | ||||||||| ||||| |||   |||||||||||||||||||    ||||| |||||| |  |||||||||||||  | |||| |     
T  26459105 -tttacacctttctactcaaactaacactttagtaccccctaaagctagatgagactttgtttacaatttgtat-ggagtttgaatgatatagatcagac 26459008  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--att 291  Q
    |||| ||||| | |    ||  ||| || |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  |||    
T  26459007 aagagaagaatggacgttgagatttttc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatatt 26458909  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||| |||||||||| |||||||||||| |||||||    
T  26458908 ttttctaaagcttc-aaacactcttatattgtttt 26458875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 518966 - 519094
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  518966 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 519065  T
Q  101 ttttacaccttt-tgctcaaactagcactt 129  Q
     ||||||||||| ||||||||||| |||||    
T  519066 -tttacacctttctgctcaaactaacactt 519094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 311
Target Start/End: Complemental strand, 30652295 - 30652061
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||||||||||  ||||| |||| ||||| |||  |||||||||||||||| ||||||| |  |||||  |||||    
T  30652295 ttcttgctaagttacccacttagacttttacaccttcagctcagactaacactttagtacccctaaagctagatgaaactttacaagatgtttg-gagtt 30652197  T
Q  176 tgaatgattga-aatcataaaagataagaaggaagagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttcttcaaat 274  Q
    |||| | |||| || || | |  | ||||| | || |||||||||||||||   |||||||| |||||||||||||||||||  |||||||| || ||||    
T  30652196 tgaa-gtttgagaaacaaacagaagaagaatggagggagaagtttatctttaa-aaagataaaagagaattgatttacacttaaaaagacttattgaaat 30652099  T
Q  275 ctttgtgatgatcaat-ttttgctaaagcttcaaaaca 311  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  30652098 ctttgtgatgatcaattttttgctaaagcttcacaaca 30652061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 76 - 306
Target Start/End: Complemental strand, 16058993 - 16058757
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||| | ||||||||||||||||||  ||||| |||| ||||| |||  |||||||||||||||||||||||| |  ||||| ||||||    
T  16058993 ttcttgctaagttactcacttagacttttacaccttcagctcagactaacactttagtacccctaaagctagatgagactttacaagatgttt-tgagtt 16058895  T
Q  176 tgaatgattga-aatcataaaagataagaagga------agagagaagtttatcttttcgaaagataagagagaattgatttacacttttaaagacttct 268  Q
    |||||| |||| || || | |  | |||||| |      || |||||||||||||||   |||||||||||| |||||||||||||||  ||||||||||    
T  16058894 tgaatgtttgagaaacaaacagaagaagaagaataatggagggagaagtttatctttaa-aaagataagagataattgatttacacttaaaaagacttct 16058796  T
Q  269 tcaaatctttgtgatgatcaat-ttttgctaaagcttca 306  Q
    |  ||||||||||||||||||| ||||||||||||||||    
T  16058795 tggaatctttgtgatgatcaattttttgctaaagcttca 16058757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 4837276 - 4837432
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||  || || |||| ||  ||  || | |||||| || ||||||    
T  4837276 tcctgcaccttacaatccttgttcacctgaacaattacaacaactgtattctctaagcaacagcaggcttgcaccttgtttct-aagttaaccacttaga 4837374  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  4837375 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 4837432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16398034 - 16397879
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||| |||||| |||||||||||||| ||||||| ||  |||||||||||||| ||| || |||||||  ||| ||| |||||||||| |||||||    
T  16398034 tcctgcactttacaatcttgttcacctgaacaattacatcaattgtattctctaagcctcagcaggcttacaccttt-ttgctaagttacccacttagac 16397936  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| | |||| ||||||||  |||| |||  |||||||||||| |||||||||    
T  16397935 ttttacaacctttgttcaaactaatactttagtacccctaaagctagttgagacttt 16397879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 10422568 - 10422413
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  10422568 tcctgcaccttacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 10422471  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| | | ||||||||||||| ||||| |||  ||||| ||||||||||||||||    
T  10422470 cttttataacctttgctcaaactaacactttagtacccctagagctagatgagacttt 10422413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 13402067 - 13402219
Alignment:
Q  5 gcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttt 103  Q
    ||||||||||| ||| ||||| ||||| ||||||| || ||||||||||||||| ||| || |||| ||  || |||| |||||||||| ||||||||||    
T  13402067 gcaccttacaatctttgttcaactgaacaattacaccaactgtattctctaagcctcagcaggcttgcacctt-cttgctaagttacccacttagacttt 13402165  T
Q  104 tacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||| | ||||||||||||| ||||| |||  || |||||||||||| ||||||    
T  13402166 tacaacctttgctcaaactaacactttagtacccttaaagctagatgggacttt 13402219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16630318 - 16630163
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  16630318 tcctgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 16630221  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  16630220 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 16630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 2830345 - 2830218
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  2830345 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 2830247  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  2830246 tgaatgattgaaatcagacaagagaagaa 2830218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 41527083 - 41526930
Alignment:
Q  4 tgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    |||||||||||| ||| ||||||||||| | |||||  ||||||||||||||||| ||| || |||| ||  || |||| |||||||||| |||||||||    
T  41527083 tgcaccttacaatctttgttcacctgaacagttacacaacctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttacccacttagactt 41526985  T
Q  103 ttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||   ||||||||||||| ||||| |||  |||||||| ||||||| |||||    
T  41526984 ttacaatctttgctcaaactaacactttagtacccctaaagttagatgaaacttt 41526930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 15670865 - 15670710
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| | ||||| || ||||||    
T  15670865 tcctgcaccttacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgcttagttaaccacttaga 15670768  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||| ||||||||||    
T  15670767 cttttacaacatttgctcaaactaacactttagtacccctaaagctatatgagacttt 15670710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 17984148 - 17984303
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  17984148 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 17984245  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  17984246 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 17984303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 18104698 - 18104853
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  18104698 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 18104795  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  18104796 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 18104853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 40922628 - 40922473
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  40922628 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 40922531  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  40922530 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 40922473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 16250231 - 16250105
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  16250231 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 16250134  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  16250133 ttttacaacctttgctcaacctaacactt 16250105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 17827274 - 17827430
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  17827274 tcctgcaccttacaatccttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 17827371  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  17827372 cttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 17827430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 17836665 - 17836821
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  17836665 tcctgcaccttacaatccttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 17836762  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  17836763 cttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 17836821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 2830521 - 2830444
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  ||||||||||||||||||    
T  2830521 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgaga 2830444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 2830609 - 2830528
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  2830609 ttcttgctaagttacccacttagacttttgctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 2830528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 4837439 - 4837516
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||| |||||||||| ||||||||||||| |||| ||||||||||| ||||| |||  ||||||||||||||||||    
T  4837439 ttcttgctaagttacccacttagacttttactccttctgctcaaactaacactttagtacccctaaagctagatgaga 4837516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6693003 - 6692848
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| ||||||| |||||| ||||||| | |||||||||||||||| ||| || |||| ||  || |||| ||||||| || |||||||    
T  6693003 tcctgcaccttacaatcttgttctcctgaacaattaca-ctcctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttagac 6692906  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  6692905 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 6692848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6703409 - 6703254
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| ||||||| |||||| ||||||| | |||||||||||||||| ||| || |||| ||  || |||| ||||||| || |||||||    
T  6703409 tcctgcaccttacaatcttgttctcctgaacaattaca-ctcctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttagac 6703312  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  6703311 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 6703254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16059156 - 16059000
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||  || ||||||||||||||| ||| || |||| ||  || |||  |||||||||   |||||    
T  16059156 tcctgcaccttacaatctttgttcacctgaacaattacgccaactgtattctctaagcctcagcaggcttgcacctt-ctttctaagttacctatttaga 16059058  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| ||| ||||||||||| ||||| |||  | |||||| |||||||||||||    
T  16059057 cttttacaacttctgctcaaactatcactttagtacctctaaagttagatgagacttt 16059000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 44889642 - 44889561
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||||||| ||||| |||  |||||||| |||||||||||||    
T  44889642 ttcttgctaagttacccacttagacttttacaacctttgctcaaactaacactttagtacccctaaagttagatgagacttt 44889561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 30652440 - 30652306
Alignment:
Q  18 ttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttttacaccttttgctc 117  Q
    ||||||||||||| ||||||  || ||||||||||||||| ||| || ||||  |  || |||| |||||||||| ||||||||||||||  || |||||    
T  30652440 ttgttcacctgaacaattacgccaactgtattctctaagcatcagcaggcttgtacctt-cttgctaagttacccacttagacttttacaatttctgctc 30652342  T
Q  118 aaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||| ||||| | |  ||||||||||||||||||    
T  30652341 aaactaacactttaatacccctaaagctagatgaga 30652306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 53945550 - 53945633
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttac 159  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| | |  |||||||| |||||||||||||||    
T  53945550 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttaatacccctaaagatagatgagactttac 53945633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 2830433 - 2830352
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| ||||||| || |||| |||||| | |||||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  2830433 ttcttgctaagttatccacttaaacttttgctccttttgctcaaactaacactttagtacccctaaagctagatgagacttt 2830352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16254021 - 16253866
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||||||||| |||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| |  ||||||    
T  16254021 tcctgcacctcacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaactacttaga 16253924  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | |||||||||||||  |||| |||  |||| |||||||||||||||||    
T  16253923 cttttacaacctttgctcaaactaatactttagtacccctcaagctagatgagacttt 16253866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 331
Target Start/End: Complemental strand, 41526678 - 41526574
Alignment:
Q  230 aagataagagagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaat--ttttgctaaagcttcaaaacactctt-atgttgtttt 326  Q
    ||||||||| |||||| ||||||||||  ||| |||||||  |||||||||||||||||||  |||||||||||||||| |||| | ||  |||||||||    
T  41526678 aagataagaaagaattaatttacacttgaaaatacttcttggaatctttgtgatgatcaatttttttgctaaagcttcacaacaatgttcttgttgtttt 41526579  T
Q  327 tcttg 331  Q
    |||||    
T  41526578 tcttg 41526574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 41526923 - 41526842
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||   ||| ||   ||||||||||||||||||||||    
T  41526923 ttcttgctaagttacccacttagacttttacaccttctgctcaaactaaacctttagcaaccctaaagctagatgagacttt 41526842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 16210411 - 16210538
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||  |||| ||||||  |||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  16210411 ttcttgctaagttacctacttaaacttttgtacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagat 16210509  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  16210510 tgaatgattgaaatcagacaagagaagaa 16210538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 7846097 - 7846171
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||| || |||| ||||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  7846097 taagttaaccacttaaacttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 7846171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 3486726 - 3486877
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  3486726 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 3486823  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  3486824 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 3486877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 3496049 - 3496200
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  3496049 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 3496146  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  3496147 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 3496200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5292187 - 5292338
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  5292187 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 5292284  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  5292285 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 5292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5301846 - 5301997
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  5301846 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 5301943  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  5301944 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 5301997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 17144515 - 17144363
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||| |||||||||| ||||||||||| ||| |||||||||| ||||||||||||| | ||| || |||| ||   || ||| |||| || || ||||||    
T  17144515 tcctacaccttacaatccttgttcaccggaacaattacaacaactgtattctctaaacctcagcaggcttgca-ccttattgctaaggtaaccacttaga 17144417  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  17144416 cttttacaaactcagctcaaactaacactttagttcccctaaagctagatgaga 17144363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17162375 - 17162318
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagc 57  Q
    ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||||||||    
T  17162375 tcctgcaccttacaatctttgttcacctgaacaattacaacaactgtattctctaagc 17162318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 21847071 - 21846920
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  21847071 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 21846974  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  21846973 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 21846920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 21856663 - 21856512
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  21856663 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 21856566  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  21856565 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 21856512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 21902934 - 21902783
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  21902934 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 21902837  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  21902836 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 21902783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 21912526 - 21912375
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  21912526 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 21912429  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  21912428 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 21912375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 27679852 - 27680003
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  27679852 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 27679949  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  27679950 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 27680003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 27689507 - 27689658
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  27689507 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 27689604  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  27689605 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 27689658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 13402226 - 13402353
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| ||||||| || ||||||||||| ||||||| ||||||| || || || |||  ||||| |||| ||||||||||||| |  |||||  ||| |    
T  13402226 ttcttgctaagttatccacttagacttttgcacctttagctcaaattaacaatttagtacccctagagctggatgagactttacaagatgttt-ggagct 13402324  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  13402325 tgaatgattgaaatcagacaagagaagaa 13402353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 16397796 - 16397669
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| ||| |||||| |||||| |||| |||||||  ||||||||| ||||| |||   ||||||||||||||| ||||||| |  |||||  ||| |    
T  16397796 ttcttgctaaattacccacttagaatttttcacctttaactcaaactaacactttagtactcctaaagctagatgacactttacaagatgttt-ggagct 16397698  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  16397697 tgaatgattgaaatcagacaagagaagaa 16397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 53945480 - 53945543
Alignment:
Q  94 cttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||||||||||   ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  53945480 cttagacttttacaatctttgctcaaactaacactttagtacccctaaagctagatgagacttt 53945543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 2830771 - 2830620
Alignment:
Q  1 tcctgcaccttacaacct-tgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||||||||||||||  | |||||||||||| | ||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  2830771 tcctgcaccttacaatatgtgttcacctgaacacttacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 2830674  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  2830673 cttttacaaactcagctcaaactaacactttagtacccctaaagctagatgaga 2830620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 4837527 - 4837608
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||| ||| ||||||||||| | |||| ||||||||||| ||||| ||   | ||||||||||||||||||||    
T  4837527 ttcttgctaagtttcccacttagacttttgctccttctgctcaaactaacactttagcacctctaaagctagatgagacttt 4837608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 17162212 - 17162129
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttac 159  Q
    |||||| ||||||| || ||||||||||||||   |  |||||||||| ||||| |||  |||||||||||||||||| |||||    
T  17162212 ttcttgctaagttatccacttagacttttacaaactcggctcaaactaacactttagtacccctaaagctagatgagattttac 17162129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 3486891 - 3486973
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  3486891 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 3486973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 3486984 - 3487066
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  3486984 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 3487066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 3496214 - 3496296
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  3496214 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 3496296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 3496307 - 3496389
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  3496307 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 3496389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 5292445 - 5292527
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  5292445 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 5292527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 5302104 - 5302186
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  5302104 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 5302186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 21846813 - 21846731
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  21846813 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 21846731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 21856405 - 21856323
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  21856405 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 21856323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 21902676 - 21902594
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  21902676 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 21902594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 21912268 - 21912186
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  21912268 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 21912186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 27680110 - 27680192
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  27680110 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 27680192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 27689765 - 27689847
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  27689765 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 27689847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 5292352 - 5292405
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  5292352 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 5292405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 5302011 - 5302064
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  5302011 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 5302064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 21846906 - 21846853
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  21846906 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 21846853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 21856498 - 21856445
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  21856498 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 21856445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 21902769 - 21902716
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  21902769 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 21902716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 21912361 - 21912308
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  21912361 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 21912308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 27680017 - 27680070
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  27680017 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 27680070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 27689672 - 27689725
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  27689672 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 27689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 19343101 - 19342771
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  19343101 tcctacaccttacaaccttgttcacctgaacaattacaacaactgtattctctaagcctcagcaggcttacacctttcttgctaagttacccacttagac 19343002  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagac-----tttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
     ||||||||||| ||||||||||| ||||| | |  |||||||||||||||||||     ||||| |||||| |  |||||||||||||  | |||| |     
T  19343001 -tttacacctttctgctcaaactaacactttaatacccctaaagctagatgagacttttgtttacaatttgtat-ggagtttgaatgatatagatcagac 19342904  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--tt 291  Q
    |||| || || | || ||||  |||||| |||  |||||||||||| | |||||||||||||||| ||||||||||  ||||||||||||||||||  ||    
T  19342903 aagagaaaaatggagggagagatttatc-tttaaaaagataagagaaatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatgtt 19342805  T
Q  292 tttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    |||||||||||||| ||||||||||||||||||||    
T  19342804 tttgctaaagcttc-aaacactcttatgttgtttt 19342771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 4 - 326
Target Start/End: Original strand, 15474756 - 15475078
Alignment:
Q  4 tgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttt 103  Q
    |||||||||||| |||||||||||||| ||||||||||  |||||||||||||| | | || | ||||| |||||||| ||| |||||| ||||||| ||    
T  15474756 tgcaccttacaatcttgttcacctgaacaattacaacaattgtattctctaagccttagcaggattacacttttcttgctaatttacccacttagac-tt 15474854  T
Q  104 tacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaagataa- 201  Q
    ||||||||| ||||||||||| ||||| |||  |  ||||||||||||||||||||| |||||||| |||||||||||||||||||||| | |||| ||     
T  15474855 tacacctttctgctcaaactatcactttagtacctgtaaagctagatgagactttacaatttgtttgtgagtttgaatgattgaaatcagacaagagaat 15474954  T
Q  202 gaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--tttttgcta 298  Q
     ||||||| ||||| |||||| |||  |||||||||||| | ||||||  |||| |||||| |||||||  |||||||||||  |||||  |||||||||    
T  15474955 aaaggaag-gagaaatttatc-tttaaaaagataagagaaatattgatacacacgtttaaatacttcttggaatctttgtga-catcaatgtttttgcta 15475051  T
Q  299 aagcttcaaaacactcttatgttgtttt 326  Q
    ||||||| ||||||||||||||||||||    
T  15475052 aagcttc-aaacactcttatgttgtttt 15475078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 27159198 - 27159527
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  27159198 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 27159297  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     ||||||||||| | ||||||||| ||||| |||  ||||||||||||||||||    |||||| |||||| |  ||| |||||||||  | |||| | |    
T  27159298 -tttacacctttcttctcaaactaacactttagtacccctaaagctagatgagactttctttacaatttgtat-ggaggttgaatgatatagatcagaca 27159395  T
Q  196 agataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--attt 292  Q
    ||| ||||| | ||   ||| |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  ||||    
T  27159396 agagaagaatggaggttgaaatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatattt 27159494  T
Q  293 ttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||||  |||||||||| |||||||||    
T  27159495 ttgctaaagctt-taaacactcttgtgttgtttt 27159527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 27169546 - 27169875
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  27169546 tcctgcaccttacaaccttgttcacctgaacaattacaacaactgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 27169645  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagtgtccctaaagctagatgaga----ctttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     ||||||||||| | ||||||||| ||||| |||  ||||||||||||||||||    |||||| |||||| |  ||| |||||||||  | |||| | |    
T  27169646 -tttacacctttcttctcaaactaacactttagtacccctaaagctagatgagactttctttacaatttgtat-ggaggttgaatgatatagatcagaca 27169743  T
Q  196 agataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--attt 292  Q
    ||| ||||| | ||   ||| |||||| |||  |||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||||  ||||    
T  27169744 agagaagaatggaggttgaaatttatc-tttgaaaagataagagagatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatattt 27169842  T
Q  293 ttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||||  |||||||||| |||||||||    
T  27169843 ttgctaaagctt-taaacactcttgtgttgtttt 27169875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 22908069 - 22908398
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||||||||||||||||||||||||||  ||||||||||  |||||||||| ||| ||| || |||||||  ||||||| |||||||||| |||||||    
T  22908069 tcctgcaccttacaaccttgttcacctgattaattacaacaattgtattctcttagcctcagcaggcttacacctttcttgctaagttacccacttagac 22908168  T
Q  101 ttttacacc-ttttgctcaaactagcacttcagtgtccctaaagctagatgagac----tttaccatttgtttatgagtttgaatgattgaaatcataaa 195  Q
     |||||||| |||||||||||||| ||||| |||  |||||||||||||||||||    ||||| |||||| |  |||||||| ||||  | || | | |    
T  22908169 -tttacacctttttgctcaaactaacactttagtacccctaaagctagatgagactttgtttacaatttgtat-ggagtttgattgatatagattagata 22908266  T
Q  196 agataagaaggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatca--attt 292  Q
    ||| | ||| | || ||||  |||||| |||  |||||||||||| | |||||||||||||||| ||||||||||  |||||||||||||||||  ||||    
T  22908267 agagaggaatggagggagagatttatc-tttaaaaagataagagaaatattgatttacacttttgaagacttcttggaatctttgtgatgatcaatattt 22908365  T
Q  293 ttgctaaagcttcaaaacactcttatgttgtttt 326  Q
    ||||||||||||| ||||||||||||||||||||    
T  22908366 ttgctaaagcttc-aaacactcttatgttgtttt 22908398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 326
Target Start/End: Complemental strand, 22902916 - 22902596
Alignment:
Q  10 ttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttttacacc 109  Q
    ||||||||||||||||||||| |||||||||| || |||||||| ||| |||||| | |||||  ||||||  |||||||||  ||||||| ||||||||    
T  22902916 ttacaaccttgttcacctgaacaattacaacaactatattctcttagcctcaacaggtttacacctttcttactaagttacctacttagac-tttacacc 22902818  T
Q  110 ttt-tgctcaaactagcacttcagtgtccctaaagctagatgagac----tttaccatttgtttatgagtttgaatgattgaaatcataaaagataagaa 204  Q
    ||| | ||||||||| ||||| |||  | || ||||||||||||||    ||||| |||||| |  |||||| ||||||  | |||| | |||| |||||    
T  22902817 tttcttctcaaactaacactttagtacctcttaagctagatgagactttgtttacaatttgtat-ggagtttaaatgatatagatcagacaagagaagaa 22902719  T
Q  205 ggaagagagaagtttatcttttcgaaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--tttttgctaaag 301  Q
     | || ||||  |||| | |||  |||||||||||| | |||||||||||||||| ||||||||||  ||||||||| ||||||||  |||||| |||||    
T  22902718 tggagggagagattta-cctttaaaaagataagagaaatattgatttacacttttgaagacttcttggaatctttgttatgatcaatgtttttgttaaag 22902620  T
Q  302 cttcaaaacactcttatgttgtttt 326  Q
    |||| ||||||||||||||||||||    
T  22902619 cttc-aaacactcttatgttgtttt 22902596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 308
Target Start/End: Original strand, 69370 - 69685
Alignment:
Q  4 tgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttt 103  Q
    ||||||||| ||  || |||||||||| |||||||||| ||||||||||||||| ||| || |||| ||  || |||  |||||||||| |||||| |||    
T  69370 tgcaccttaaaatattattcacctgaacaattacaacaactgtattctctaagcctcagcaggcttgcacctt-cttactaagttacccacttagaattt 69468  T
Q  104 tacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagact----ttaccatttgtttatgagtttgaatgattgaaatcataaaagat 199  Q
    |||||| ||||||||||||| ||||| |||  ||||||||||||||||||||    |||| |||||| |  ||||||||||| ||||||||| | || |     
T  69469 tacaccctttgctcaaactaacactttagtacccctaaagctagatgagactttgattacaatttgtat-ggagtttgaatgtttgaaatcaaacaaaag 69567  T
Q  200 aagaag---gaagagagaagtttatcttttcgaaagataag----agagaattgatttacacttttaaagacttcttcaaatctttgtgatgatcaattt 292  Q
    ||||||   | || ||| |||||||| |||  |||||||||    ||||||||||||||| ||   ||| |||||||  |||||||||||||||||||||    
T  69568 aagaagaaaggagggaggagtttatc-tttgaaaagataagagaaagagaattgatttacgctaaaaaatacttcttggaatctttgtgatgatcaattt 69666  T
Q  293 ---ttgctaaagcttcaaa 308  Q
        |||||||||||||||    
T  69667 caaatgctaaagcttcaaa 69685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 45015498 - 45015343
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  45015498 tcctgcaccttacaatctttgttcacctgaacaattacaactc-tgtattctctaagcttcagcaggcttgcaccttg-ttgctaagttaaccacttaga 45015401  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  45015400 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 45015343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 29424135 - 29423983
Alignment:
Q  4 tgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    |||||||||||| ||| ||||||||||| ||||||||| | |||| ||||||||| |||||| |||| ||  || |||| ||||||| || |||||||||    
T  29424135 tgcaccttacaatctttgttcacctgaacaattacaactc-tgtactctctaagcctcaacaggcttgcacctt-cttgctaagttaaccacttagactt 29424038  T
Q  103 ttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||| | ||||||||||||| ||||| |||  |||||||| |||||||||||||    
T  29424037 ttacaacatttgctcaaactaacactttagtacccctaaagttagatgagacttt 29423983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 24695776 - 24695931
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  24695776 tcctgcaccttacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 24695873  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||||||   ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  24695874 cttttacaaactttgctcaaactaacactttagtacccctaaagctagatgagacttt 24695931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 37862308 - 37862463
Alignment:
Q  1 tcctgcaccttacaacc-ttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| | ||||||||||||| ||||||||  | |||||||||||||| |||||| |||| ||  ||| ||| ||||||| || || | |    
T  37862308 tcctgcaccttacaatcattgttcacctgaacaattacaattc-tgtattctctaagcctcaacaggcttgcaccttt-ttgctaagttaaccactaaaa 37862405  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  37862406 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 37862463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 38929702 - 38929857
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| |||||||||   |||||||||||||| |||||| |||| ||  ||  ||| ||||||| || ||||||    
T  38929702 tcctgcaccttacaatctttgttcacctgaacaattacaactt-tgtattctctaagcctcaacaggcttgcaccttg-ttgctaagttaaccacttaga 38929799  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  |||||||| |||||||||||||    
T  38929800 cttttacaacctttgctcaaactaacactttagtacccctaaaggtagatgagacttt 38929857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 45191622 - 45191467
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  45191622 tcctgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 45191525  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  45191524 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 45191467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 3605090 - 3605217
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtt 175  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  |||||||||||||||||||||||| |  |||||   || |    
T  3605090 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttacaagatgttt-gaagct 3605188  T
Q  176 tgaatgattgaaatcataaaagataagaa 204  Q
    |||||||||||||||| | |||| |||||    
T  3605189 tgaatgattgaaatcagacaagagaagaa 3605217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 41026099 - 41026254
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| |||||||| || ||||| | ||  |||||||||||||| ||| || |||| ||  || |||| |||||||||| ||||||    
T  41026099 tcctgcaccttacaatctttgttcacctaaacaattatatcaattgtattctctaagcctcatcaggcttgcacctt-cttgctaagttacccacttaga 41026197  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactt 156  Q
    ||||||||   ||||||||||||| ||||| |||  |||||||||||||||||||||    
T  41026198 cttttacaatctttgctcaaactaacactttagtacccctaaagctagatgagactt 41026254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 16901665 - 16901748
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttac 159  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  ||||||||||||||||||||||||    
T  16901665 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttac 16901748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 16995056 - 16995139
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttac 159  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||| |||  ||||||||||||||||||||||||    
T  16995056 ttcttgctaagttacccacttagacttttgcacctttagctcaaactaacactttagtacccctaaagctagatgagactttac 16995139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 2997891 - 2998046
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  2997891 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 2997988  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  2997989 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 2998046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18652003 - 18651848
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  18652003 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 18651906  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  18651905 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 18651848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18664121 - 18663966
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  18664121 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 18664024  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  18664023 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 18663966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 21110000 - 21109848
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||| |||||||||| ||| ||||| ||||| ||||||||||| | |||||||||||  ||| || |||| ||   ||||||||||||||||| ||||||    
T  21110000 tcctacaccttacaatctttgttcaactgaacaattacaacacatatattctctaagtctcagcaggcttgca-ccttcttgttaagttacccacttaga 21109902  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   ||||||||||||| ||||| |||  ||||||||||| ||||||    
T  21109901 cttttacaaactttgctcaaactaacactttagtacccctaaagctatatgaga 21109848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 22679106 - 22679187
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  22679106 ttcttgctaagttacccacttagacttttgctccttttgctcaaactaacactttagtacccctaaagctagatgagacttt 22679187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 229 - 326
Target Start/End: Complemental strand, 23730348 - 23730249
Alignment:
Q  229 aaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--tttttgctaaagcttcaaaacactcttatgttgttt 325  Q
    |||||||||||| | ||| |||||||||||| ||||||||||  ||||||||||||||||||  |||||||||||| ||| |||||||||||||||||||    
T  23730348 aaagataagagaaatattaatttacacttttgaagacttcttggaatctttgtgatgatcaatgtttttgctaaagattc-aaacactcttatgttgttt 23730250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 38957044 - 38957199
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || |||| |    
T  38957044 tcctgcaccttacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaaa 38957141  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  |||||||| |||||||||||||    
T  38957142 cttttacaacctttgctcaaactaacactttagtacccctaaaggtagatgagacttt 38957199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 32935981 - 32936107
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  32935981 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 32936078  T
Q  101 ttttacaccttttgctcaaactagcactt 129  Q
    ||||||| | ||||||||| ||| |||||    
T  32936079 ttttacaacctttgctcaacctaacactt 32936107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 9501954 - 9502109
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| |||||||  | |||||||    
T  9501954 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaatcacttagac 9502051  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  9502052 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 9502109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 9513320 - 9513475
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| |||||||  | |||||||    
T  9513320 tcctgcaccttacaatcttgttcacctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaatcacttagac 9513417  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  9513418 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 9513475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 16901577 - 16901658
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  16901577 ttcttgctaagttacccacttagacttttgctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 16901658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 16994968 - 16995049
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  16994968 ttcttgctaagttacccacttagacttttgctccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 16995049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 3605002 - 3605083
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| ||||||| |  ||||||||||||| |||| ||||||||||| ||||| |||  ||||||||||||||||||||||    
T  3605002 ttcttgctaagttatctacttagacttttactccttctgctcaaactaacactttagtacccctaaagctagatgagacttt 3605083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 16901414 - 16901566
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||||| ||| || |||| ||   || ||| ||||||| || ||||||    
T  16901414 tcctgcactttacaatccttgttcacctgaacaattacaacaactgtattctctaagcctcagcaggcttgca-ccttgttgctaagttaaccacttaga 16901512  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
     |||||||      |||||||||| ||||| |||  ||||||||||||||||||    
T  16901513 attttacaaacgcagctcaaactaacactttagtacccctaaagctagatgaga 16901566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 16994805 - 16994957
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||||||| |||||| ||||||||||||||| |||||||||| ||||||||||||||| ||| || |||| ||   || ||| ||||||| || ||||||    
T  16994805 tcctgcactttacaatccttgttcacctgaacaattacaacaactgtattctctaagcctcagcaggcttgca-ccttgttgctaagttaaccacttaga 16994903  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
     |||||||      |||||||||| ||||| |||  ||||||||||||||||||    
T  16994904 attttacaaacgcagctcaaactaacactttagtacccctaaagctagatgaga 16994957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 17489475 - 17489320
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  ||| |||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  17489475 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctatattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 17489378  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||| ||||| ||| ||||| ||   | || ||||||||||||||||||    
T  17489377 ttttacaaccttttctcaacctaacactttaggacctctaaaagctagatgagacttt 17489320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 44637850 - 44638005
Alignment:
Q  1 tcctgcaccttacaacct-tgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||| | || || ||||||||| | ||||||||| |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  44637850 tcctgcaccttaccatctgtgatcacctgaacacttacaacac-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 44637947  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |    ||||||||||||||||||||||    
T  44637948 cttttacaacctttgctcaaactaacactttaacacccctaaagctagatgagacttt 44638005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 44638012 - 44638093
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||| ||||| ||||||||||||| |||| ||||||||||| || || |||  ||||||||||||||||||||||    
T  44638012 ttcttgctaagctacccacttagacttttactccttctgctcaaactaacattttagtacccctaaagctagatgagacttt 44638093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 4468788 - 4468637
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  4468788 tcctgcaccatacaatctttgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 4468691  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  4468690 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 4468637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5336056 - 5336207
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  5336056 tcctgcaccatacaatcttcgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 5336153  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  5336154 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 5336207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5345908 - 5346059
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||    
T  5345908 tcctgcaccatacaatcttcgttcacctgaacaattacaat-cctgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttaga 5346005  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |   ||||||||| ||||| |||  ||||||||||||||||||    
T  5346006 cttttacaaactcatctcaaactaacactttagtacccctaaagctagatgaga 5346059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 12571301 - 12571228
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactt 156  Q
    ||||||| || ||||||||||||||   ||||||||| ||| ||||| |||  |||||||||||||||||||||    
T  12571301 taagttaaccacttagacttttacaatctttgctcaagctaacactttagtacccctaaagctagatgagactt 12571228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 33432474 - 33432551
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||| |||||||||| ||||||||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  33432474 ttcttgctaagttacccacttagacttttacaaactcagctcaaactaacactttagtacccctaaagctagatgaga 33432551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 33432565 - 33432642
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||| |||||||||| ||||||||||||||   |  |||||||||| ||||| |||  ||||||||||||||||||    
T  33432565 ttcttgctaagttacccacttagacttttacaaactcagctcaaactaacactttagtacccctaaagctagatgaga 33432642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 4458905 - 4458823
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  4458905 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 4458823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 4468530 - 4468448
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  4468530 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 4468448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 5336404 - 5336486
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  5336404 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 5336486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 5346257 - 5346339
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  5346257 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 5346339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 4458998 - 4458945
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  4458998 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 4458945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 4468623 - 4468570
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  4468623 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 4468570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 5346164 - 5346217
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcactt 129  Q
    |||||| |||||||||| |||||||||||||| | ||||||||| ||| |||||    
T  5346164 ttcttgctaagttacccacttagacttttacaacctttgctcaacctaacactt 5346217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 22678944 - 22679095
Alignment:
Q  1 tcctgcaccttacaacct-tgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||||||||||||||  | |||||||||||| | ||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  22678944 tcctgcaccttacaatatgtgttcacctgaacacttacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 22679041  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  || |||||||||||||||    
T  22679042 cttttacaaactcagctcaaactaacactttagtacccttaaagctagatgaga 22679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 16230 - 15970
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagt----taccccctt 96  Q
    ||||||||||||||| |||||||| ||||| || ||||||| |||||||||||||||||||||| |||| | |  |||||| |||||    ||||| |||    
T  16230 tcctgcaccttacaatcttgttcagctgaacaagtacaacaactgtattctctaagcgtcaacaggcttgc-tccttcttgctaagttacgtacccactt 16132  T
Q  97 agacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagactttaccatttgtttatgagtttgaatgattgaaatcataaaa 196  Q
    ||||||||||| | ||| ||||||||| |||||  ||   |||||| |||||||||||||||| ||||||||  |||||||||||||| |||||| | ||    
T  16131 agacttttacaacctttactcaaactaacactttggtactcctaaatctagatgagactttacaatttgttt-ggagtttgaatgattaaaatcagacaa 16033  T
Q  197 g---ataagaaggaagagagaagtttatcttttcgaaagataagagagaattgatttacacttt 257  Q
    |   | ||||| | || | |||||||||| ||| | ||||||||||||||||||||||||||||    
T  16032 gagaaaaagaatggagggggaagtttatc-tttagcaagataagagagaattgatttacacttt 15970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 74010 - 74165
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||| ||||||||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  74010 tcctgaaccttacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 74107  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  74108 cttttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 74165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 309303 - 309419
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| |||||| |||| ||   |||||| ||||||| || |||||||    
T  309303 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcaacaggcttgca-ccttcttgctaagttaaccacttagac 309400  T
Q  101 ttttacaccttttgctcaa 119  Q
    ||||||| | |||||||||    
T  309401 ttttacaacctttgctcaa 309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 20337 - 20489
Alignment:
Q  1 tcctgcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||| || |||| ||   || ||| ||||||| || ||||||    
T  20337 tcctgcaccttacaatccttgttcacctgaacaattacaacaactgtattctctaagcctcagcaggcttgca-ccttgttgctaagttaaccacttaga 20435  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||||   |  |||||||||| ||||| |||  ||||||||||| ||||||    
T  20436 cttttacaaactcagctcaaactaacactttagtacccctaaagctatatgaga 20489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 20500 - 20580
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| |||| ||||||||| | ||||||||||||| ||||| | |  ||||||||||||||||||||||    
T  20500 ttcttgctaagttacccacttatacttttacaacctttgctcaaactaacactt-aatacccctaaagctagatgagacttt 20580  T

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Target: scaffold0014 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 233272 - 233427
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  233272 tcctgcaccttacaatcttgttcacctgaacaattacaa-tcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 233369  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  233370 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 233427  T

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Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 147492 - 147340
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||| ||||| ||||||||    |||||||||||||| ||| ||||||| ||  || || | ||||||| |  ||||||    
T  147492 tcctgcaccttacaatctttgttcaactgaacaattacaatta-tgtattctctaagcctcagcatgcttgcaccttcct-gctaagttaactacttaga 147395  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagac 154  Q
    |||||||| | |||||| |||||| ||||| |||  |||||||||||||||||||    
T  147394 cttttacaacctttgcttaaactaacactttagtacccctaaagctagatgagac 147340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 1054 - 898
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    |||||| |||||||| |||||||||||||| |||||||||| || |||||| ||||| |||||| |||||    ||||||| ||| |  ||| |||||||    
T  1054 tcctgcgccttacaatcttgttcacctgaacaattacaacaactatattctgtaagcctcaacaggcttagcactttcttgctaaat--cccacttagac 957  T
Q  101 ttttacaccttt-tgctcaaactagcacttcagt-gtccctaaagctagatgagacttt 157  Q
    |||||||| ||| ||||||||||| ||||| |||   |||||||| |||||||||||||    
T  956 ttttacacttttctgctcaaactaacactttagtaccccctaaagttagatgagacttt 898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 146 - 1
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  146 tcctgcaccttacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 49  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctag 147  Q
    |||||||| | ||||||||||||| ||||| |||  ||||||||||||    
T  48 cttttacaacctttgctcaaactaacactttagtacccctaaagctag 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 7126 - 7281
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagac 100  Q
    ||||||||||||||| ||||||| |||||| |||||| || |||||||||||||||| ||| || |||| ||   |||||| ||||||| || |||||||    
T  7126 tcctgcaccttacaatcttgttctcctgaacaattac-actcctgtattctctaagcctcagcaggcttgca-ccttcttgctaagttaaccacttagac 7223  T
Q  101 ttttacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    ||||||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  7224 ttttacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 7281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 8672 - 8591
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| ||| ||| |||||||||| ||||| |||  ||||||||||||||||||||||    
T  8672 ttcttgctaagttaccctcttagacttttgcacatttagctcaaactaacactttagtacccctaaagctagatgagacttt 8591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 8760 - 8679
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||| |||  || |||||||||||||||||||    
T  8760 ttcttgctaagttacccacttagacttttgctccttctgctcaaactaacactttagtacccataaagctagatgagacttt 8679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 55127 - 55282
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||| | |||||||||||||| ||| ||  ||| ||  ||  ||| ||||||| || ||||||    
T  55127 tcctgcaccttacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagcagacttgcaccttg-ttgctaagttaaccacttaga 55224  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | |||||||||||||  |||| | |  ||||||||||||||||||||||    
T  55225 cttttacaacctttgctcaaactaatactttaatacccctaaagctagatgagacttt 55282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 1735 - 1478
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||| ||| ||| |||||| |||| ||||||| ||| |||||||||||||| ||| || |||| ||   |||||| |||||||||| | ||||    
T  1735 tcctgcaccttgcaatctttgttcacttgaacaattacagcacatgtattctctaagcttcagcaggcttgca-ccttcttgctaagttacccgcgtaga 1637  T
Q  100 c-ttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagact----ttaccatttgtttatgagtttgaatgattgaaatcataa 194  Q
    | ||||||| | ||| ||||||||| ||||| |||  ||||||||||| |||||| |    |||| | |||| |  ||||||||||||||||||||| |     
T  1636 ctttttacaacctttactcaaactaacactttagtacccctaaagctaaatgagattttgattacaaattgtat-ggagtttgaatgattgaaatcaaac 1538  T
Q  195 aagataagaaggaagagagaagtttatcttttcgaaagataagagagaattgatttacactt 256  Q
    |||| ||||| | || |||||  ||||| |||   |||||||||||||||||||||||||||    
T  1537 aagagaagaatggagggagaa-attatc-tttaacaagataagagagaattgatttacactt 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 126 - 278
Alignment:
Q  4 tgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    |||||||||||| ||| ||||||||||| ||||||||    |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||| |||    
T  126 tgcaccttacaatctttgttcacctgaacaattacaattt-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttagtctt 223  T
Q  103 ttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    ||||| | ||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  224 ttacaacctttgctcaaactaacactttagtacccctaaagctagatgagacttt 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 326
Target Start/End: Complemental strand, 14574 - 14475
Alignment:
Q  229 aaagataagagaga-attgatttacacttttaaagacttcttcaaatctttgtgatgatcaa--tttttgctaaagcttcaaaacactcttatgttgttt 325  Q
    |||||||||||| | |||||||||||||||| |||||||  |  |||||||||| |||||||  |||||||||||||||| |||||||| ||||||||||    
T  14574 aaagataagagaaatattgatttacacttttgaagactttctggaatctttgtgttgatcaatgtttttgctaaagcttc-aaacactcatatgttgttt 14476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 111051 - 111206
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||| ||||| ||| ||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  ||  ||| ||||||| || ||||||    
T  111051 tcctgcaccatacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagcaggcttgcaccttg-ttgctaagttaaccacttaga 111148  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| | | ||||||||||||| ||||  |||  ||||||||||||||||||||||    
T  111149 cttttataacctttgctcaaactaacactatagtacccctaaagctagatgagacttt 111206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 18650 - 18802
Alignment:
Q  5 gcaccttacaa-ccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagacttt 103  Q
    ||||||||||| ||||||||||||||| ||||||||  | |||||||||||||| ||| || |||| ||  || |||| ||||||| || ||||||||||    
T  18650 gcaccttacaatccttgttcacctgaacaattacaat-cttgtattctctaagcctcagcaggcttgcacctt-cttgctaagttaaccacttagacttt 18747  T
Q  104 tacaccttttgctcaaactagcacttcagtgtccct-aaagctagatgagacttt 157  Q
    |||| | ||||||||| ||| ||||| ||   | || ||||||||||||||||||    
T  18748 tacaacctttgctcaacctaacactttaggacctctaaaagctagatgagacttt 18802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 1240 - 1395
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||| ||||||| ||| ||||||||||| ||||||||| | |||||| | ||||| ||||||  ||| ||  ||  ||| || |||| || ||||||    
T  1240 tcctgcatcttacaatctttgttcacctgaacaattacaactc-tgtattatataagcctcaacagccttgcaccttg-ttgctacgttaaccacttaga 1337  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||| ||||||||| ||||| |||  ||||||||||||||||||||||    
T  1338 cttttacaaccttttctcaaactaacactttagtacccctaaagctagatgagacttt 1395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 28458 - 28539
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||| | ||||||||||| | |||| ||||||||||| ||||| |||  ||||||||||| ||||||||||    
T  28458 ttcttgctaagttacacacttagacttttgctccttctgctcaaactaacactttagtacccctaaagctatatgagacttt 28539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 49661 - 49742
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||| |||||||||| ||||||||||| | |||| |||| |||||| ||||| |||  |||||||| |||||||||||||    
T  49661 ttcttgctaagttacccacttagacttttgctccttctgcttaaactaacactttagtacccctaaagatagatgagacttt 49742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 92161 - 92316
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    ||||||||||||||| ||| ||||||||||| ||||||||  | |||||||||||||| |||  | |||| ||  ||  ||| ||||||| |  ||||||    
T  92161 tcctgcaccttacaatctttgttcacctgaacaattacaattc-tgtattctctaagcctcagtaggcttgcaccttg-ttgctaagttaactacttaga 92258  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgagacttt 157  Q
    |||||||| | ||||||||||||| ||||| |||  | ||||| ||||||||||||||    
T  92259 cttttacaacctttgctcaaactaacactttagtacctctaaatctagatgagacttt 92316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 8896 - 8745
Alignment:
Q  1 tcctgcaccttacaacctt-gttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttaga 99  Q
    |||||||||| |||| ||| ||||||||||| ||||||||| | |||||||||||||| |||  |  ||| ||  ||  ||| ||||||| |  ||||||    
T  8896 tcctgcacctcacaatctttgttcacctgaacaattacaactc-tgtattctctaagcctcagaagacttgcaccttg-ttgctaagttaactacttaga 8799  T
Q  100 cttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||||| | ||||||||||||| ||||| |||  |||| |||||||||||||    
T  8798 cttttacaacctttgctcaaactaacactttagtacccctcaagctagatgaga 8745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 28132 - 28209
Alignment:
Q  76 ttcttgttaagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    |||||| |||||||||| |||||| |||||||   ||||||||||||||||||| | |   |||||||||||||||||    
T  28132 ttcttgctaagttacccacttagaattttacaagctttgctcaaactagcactttactacgcctaaagctagatgaga 28209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 370 - 440
Alignment:
Q  83 taagttacccccttagacttttacaccttttgctcaaactagcacttcagtgtccctaaagctagatgaga 153  Q
    ||||||| || ||||||| |||||| | ||||||||||||| ||||| |||  ||||||||||||| ||||    
T  370 taagttaaccacttagacatttacaacctttgctcaaactaacactttagtacccctaaagctagaagaga 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 19753 - 19725
Alignment:
Q  1 tcctgcaccttacaaccttgttcacctga 29  Q
    |||||||||||||||||||||||||||||    
T  19753 tcctgcaccttacaaccttgttcacctga 19725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 66329 - 66229
Alignment:
Q  3 ctgcaccttacaaccttgttcacctgaaaaattacaacacctgtattctctaagcgtcaacatgcttacatttttcttgttaagttacccccttagactt 102  Q
    ||||||||||||| ||||||||| | || |||||||| |  |||||||||||||  ||| || |||||||    | ||| |||||||||| |||||||||    
T  66329 ctgcaccttacaatcttgttcacttaaacaattacaataattgtattctctaagactcatcaggcttacaaccattttgctaagttacccacttagactt 66230  T
Q  103 t 103  Q
    |    
T  66229 t 66229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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