View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10265_low_25 (Length: 304)
Name: NF10265_low_25
Description: NF10265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10265_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 6 - 289
Target Start/End: Complemental strand, 42467571 - 42467289
Alignment:
| Q |
6 |
gaagcagagaggattctaaataatgatacaatcacatctcaccatgtacattttatggagttgttttaagaattaattcagcgaattaagtgatgttacg |
105 |
Q |
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| T |
42467571 |
gaagcaaagaggattctaaataatgatacaatcacatctcaccatgtacattttatggagttgttttaagaattaattcagcgaattaagtgatgttacg |
42467472 |
T |
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| Q |
106 |
atgtgatttgattagagatatatgtaatgaatttgataatatcattgcatagtgattaatttaatctctcgattacattgagtttacatttcactttcag |
205 |
Q |
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| T |
42467471 |
atgtgatttgattagagatatatgtaaagaatttgataatatcattgcatagtgattaa-ttaatctctcgattacattgagtttacatttcactttcag |
42467373 |
T |
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| Q |
206 |
atttgtaaaactaacaaaaagtctctttgattgtggaaaattaatcacaacagataaaaatatataaccgtggtgtatttaaac |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42467372 |
atttgtaaaactaacaaaaagtctctttgattgtggaaaattaatcacaacagataaaaatatataaccgtggtgtatttaaac |
42467289 |
T |
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