View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10265_low_36 (Length: 262)
Name: NF10265_low_36
Description: NF10265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10265_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 164
Target Start/End: Original strand, 31550572 - 31550700
Alignment:
| Q |
32 |
gaggcaacttatatgtcccaacttttgaaagcattgaccccaactccttctggctggtctaacaaacactcatcactgtaaatggaatggcatcgtgtgc |
131 |
Q |
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| T |
31550572 |
gaggcaaattatatgtcccaacttttgaaagcattgaccccaactccttctggctggtctaac-aacactcatcactgcaattggactggcatcgtctg- |
31550669 |
T |
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| Q |
132 |
gaccaatatagacaagttgtggccatcaagctc |
164 |
Q |
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| T |
31550670 |
--ccaatctagtcaagttgtggccatcaagctc |
31550700 |
T |
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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 31535444 - 31535392
Alignment:
| Q |
44 |
atgtcccaacttttgaaagcattgaccccaactccttctggctggtctaacaa |
96 |
Q |
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|||||| |||||||||||||| | ||||||||||| ||| |||||||||||| |
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| T |
31535444 |
atgtccaaacttttgaaagcactaaccccaactccctctaactggtctaacaa |
31535392 |
T |
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