View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10265_low_46 (Length: 248)
Name: NF10265_low_46
Description: NF10265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10265_low_46 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 447481 - 447718
Alignment:
| Q |
1 |
tcgatattctataaatgctctagagcatcaccaaggcaaaagatatgattctattttatttacatattctaataatatagttcacattcattctcatttt |
100 |
Q |
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| T |
447481 |
tcgatattctataaatgctctagagcatcaccaaggcaaaagatatgattctattttatttacatattctaataatataattcacattcattctcatttt |
447580 |
T |
|
| Q |
101 |
ttatggctattctttgtatcacaggataatcattttgattcttccttctgttttcttagcc--tagtattctcacaatagtgttttatacaaatataatt |
198 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |
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| T |
447581 |
ttatggctattctatgtatcacaggataatcattttgattcttccttctgttttcttagcctatagtattctcacaatagtgttttatacaaatatagtt |
447680 |
T |
|
| Q |
199 |
tctggctattctaatgagtataattttgattcttccct |
236 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
447681 |
tctggctattctaatgagtataattttgattcttccct |
447718 |
T |
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