View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10267_high_16 (Length: 238)
Name: NF10267_high_16
Description: NF10267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10267_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 3019128 - 3019350
Alignment:
| Q |
1 |
agttacattacatatagtagtactatgagtgaggattggagaagagtacgggacacgcacatgaaagaatccttatcatcatgtatgatgaacaaagatc |
100 |
Q |
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| T |
3019128 |
agttacattacatatagtagtactatgagtgaggattggagaagagtacgggacacgcacatgaaaggatccttatcatcatgtatgatgaacaaagatc |
3019227 |
T |
|
| Q |
101 |
actcacatgattcattgagacaaagaaaatggatctaacataacatgattaaataaatataaaggcattgaaggacatgaagagtggttagttacattac |
200 |
Q |
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| T |
3019228 |
actcacatgattcattgagacaaagaaaatggatctaacataacatgattaaataaatataaaggcattgaaggacatgaagagtggttagttacattac |
3019327 |
T |
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| Q |
201 |
ataatgtccaagaagaagaaaac |
223 |
Q |
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|||||| |||||||||||||||| |
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| T |
3019328 |
ataatgaccaagaagaagaaaac |
3019350 |
T |
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