View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10268_low_10 (Length: 281)
Name: NF10268_low_10
Description: NF10268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10268_low_10 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 71 - 272
Target Start/End: Complemental strand, 46873932 - 46873731
Alignment:
| Q |
71 |
aaaaccgcctctcaccatttctcaatcgtcactacaaaactcgcttctcatctcaatctctctcctagcatggccgccgtcacacttctcgctctcggta |
170 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46873932 |
aaaaccgcctctcaccatttctcaatcgtcactacaaaactcgcttctcatctcaatctctctcctagcatggccgccgtcacacttctcgctctcggta |
46873833 |
T |
|
| Q |
171 |
acggctctcccgacgtcttctcatctctcgctgctcttcgcgccggtcaataccgtaccggcttcggcgctatactttccgccggtgctttcgtctctgc |
270 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46873832 |
acggctctcccgacgtcttctcatctctcgctgctcttcgcgccggtcaataccgtaccggcttcggcgctatactttccgccggtgctttcgtctctgc |
46873733 |
T |
|
| Q |
271 |
tc |
272 |
Q |
| |
|
|| |
|
|
| T |
46873732 |
tc |
46873731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University