View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10268_low_19 (Length: 237)
Name: NF10268_low_19
Description: NF10268
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10268_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 44841663 - 44841459
Alignment:
| Q |
19 |
tcttgtagttttgctacttagatcgtgaggtggaaccgagggaggttgatgctgatgaatgtggaacaaggccttccatatactgatgatgttaccttat |
118 |
Q |
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| T |
44841663 |
tcttgtagttttgctacttagatcgtgaggtggaactgagggaggttgatgccgatgaatgtggaacaaggccttccatatactgatgatgttaccttat |
44841564 |
T |
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| Q |
119 |
ggccaataatgtgtcctaacattactattttatcaggattattttggtgtgtatccacttatgaaggtgtatgttatcacctctcacaaacctcactact |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |
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| T |
44841563 |
ggccaataatgtgtcctaacattactattttatcaggattattttggtgtgtatccacttatgaaggtgtgtgttatcacctctcacaaacctcacaact |
44841464 |
T |
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| Q |
219 |
ctgtg |
223 |
Q |
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||||| |
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| T |
44841463 |
ctgtg |
44841459 |
T |
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