View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10269_high_17 (Length: 211)
Name: NF10269_high_17
Description: NF10269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10269_high_17 |
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Alignment Details
Target: chr5 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 5788458 - 5788643
Alignment:
| Q |
12 |
caaaggaaggtaagaaacacagtgcaccagcaccttcaccggcattggaaggacctcctgcacctccggctggtgctcctggacctagtctcgatgcttc |
111 |
Q |
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| T |
5788458 |
caaagaaaggtaagaaacacagtgcaccagcaccttcaccggcattggaaggacctcctgcacctccggttggtgctcctggacctagtctcgatgcttc |
5788557 |
T |
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| Q |
112 |
ttctcccggtccagcatctgctgccgacgaggtacattcatgtctcctctttacg-ttttatttttatttcatgcatgtttgatat |
196 |
Q |
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| T |
5788558 |
ttctcccggtccagcatctgctgccgacgaggtacattcatgtctcctctttacgtttttatttttatttcatgcatgtttgatat |
5788643 |
T |
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