View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10269_low_1 (Length: 675)
Name: NF10269_low_1
Description: NF10269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10269_low_1 |
 | |
|
| [»] chr5 (22 HSPs) |
| |
|
| [»] chr7 (5 HSPs) |
| |
|
| [»] chr4 (1 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 598; Significance: 0; HSPs: 22)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 598; E-Value: 0
Query Start/End: Original strand, 19 - 675
Target Start/End: Complemental strand, 25469914 - 25469257
Alignment:
| Q |
19 |
atcaggtagttgattaccggaaaagatcagacgttgatcgattattgcgtacttttccttgttaaaaatcttctccttcacactgtatatcgtgtctgaa |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25469914 |
atcaggtagttgattaccggaaaagatcagacgttgatcgattattgcgtacttttccttgttaaaaatcttctccttcacactgtatatcgtgtctgaa |
25469815 |
T |
|
| Q |
119 |
ctcttaaccctcaagggtaacacctttccatccagcttctttatgaatatttgcatctgtaccacaattgccaacacagtaatcaatgatagaagaattt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25469814 |
ctcttaaccctcaagggtaacacctttccatccagcttctttatgaatatttgcatctgtaccacaattgccaacacagtaatcaatgatagaagaattt |
25469715 |
T |
|
| Q |
219 |
aataggggaaaaaa-caaagtaaagaaaaggatataggaggtaccatggaatcacaaggaagtgatctgatgcaaatttctatctcgagaggttcagaaa |
317 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25469714 |
aataggggaaaaaaacaaagtaaagaaaaggatataggaggtaccatggaatcacaaggaaatgatctgatgcaaatttctatctcgagaggttcagaaa |
25469615 |
T |
|
| Q |
318 |
aaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaaatgtgtgaaattccagcttactcatcttaga |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||| |||||||||||| |
|
|
| T |
25469614 |
aaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacccgttggacattcttcgcaaaagtgtgaaatttcagctcactcatcttaga |
25469515 |
T |
|
| Q |
418 |
acaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgcgtttcccaaaagcatagtaatatttttgagg |
517 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
25469514 |
acaagctaaaatattataactatacttggactcagaagattttggaccaatgcagcaaacattgaccgcgtttcccaaaaacatagtaatatttttgagg |
25469415 |
T |
|
| Q |
518 |
ataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatgaaggagtgatcataagaaaatttgtttcgag |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
25469414 |
ataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatgaaggagtgatcataagaaaatttattttgag |
25469315 |
T |
|
| Q |
618 |
aatccccgtgtttttggatgaaatggctggacagcacttctgatgatgcaacgaagtc |
675 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25469314 |
aatccccgtgtttttggctaaaatggctggacagcacttctgatgatgcaacgaagtc |
25469257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 290 - 667
Target Start/End: Complemental strand, 28474927 - 28474550
Alignment:
| Q |
290 |
caaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaaatg |
389 |
Q |
| |
|
||||| |||| || ||||||||| ||| ||||||||||||||||||| |||| ||||||| ||||| |||| ||||| |||||| ||||||||||| | |
|
|
| T |
28474927 |
caaatatctagcttgagaggttcggaagaaccaaatggaatcacaagcaactctgatgaaggagttgctaaagcaacctcttggacgttcttcacaaaag |
28474828 |
T |
|
| Q |
390 |
tgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgcgtt |
489 |
Q |
| |
|
|| || ||| || | |||| ||| | ||| || |||| |||||||||| |||||||||||| || |||||||||||||||| ||||||| | || |
|
|
| T |
28474827 |
actgtaaagtcagtttgcatatctgagacctagccaatatatcataactatactcggactcagaagagttaggaccaatgcagcaaatattgactccatt |
28474728 |
T |
|
| Q |
490 |
tcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatgaag |
589 |
Q |
| |
|
||||||||| | || |||| ||||| ||||||| || ||| || ||| |||||||||||||| ||||||||||||||| ||||| |||||| ||||| |
|
|
| T |
28474727 |
tcccaaaagtgtggttctattattgagaataaatagtttgccctcagtttcctcttgaagaacaatggtttcatcattagacttcaaagagacattgaag |
28474628 |
T |
|
| Q |
590 |
gagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgca |
667 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||| ||||| ||| |||||||| |||||| |||||||||||||||| |
|
|
| T |
28474627 |
gagtgaccataagaaaatttgattcgagaatccccatgtttatggctgaaatggttggacaacacttctgatgatgca |
28474550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 287 - 667
Target Start/End: Complemental strand, 32763070 - 32762690
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaa |
386 |
Q |
| |
|
|||||||| |||| || ||||||||| ||| || |||||||||||||||| |||| ||||||||||||| |||| ||| ||||||| |||||||||| |
|
|
| T |
32763070 |
atgcaaatatctagcttgagaggttcggaagaagcaaatggaatcacaagaaactctgatgaaagagttgctaaagcaacacgttggacgttcttcacaa |
32762971 |
T |
|
| Q |
387 |
atgtgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgc |
486 |
Q |
| |
|
| | || |||| ||| || | |||| ||| | ||| || |||| |||||||||| ||||||||||| || ||||| | |||||||| ||||||||| |
|
|
| T |
32762970 |
aagactgtaatttcagtttgcatatctgagagctagccaatatatcataactatactcagactcagaagagttaggaccgaggcagcaaatattgactgc |
32762871 |
T |
|
| Q |
487 |
gtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatg |
586 |
Q |
| |
|
||||| ||||| |||| |||| ||||| ||||| | || |||||| |||| ||||||||| |||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
32762870 |
atttcctaaaagtgtagttctattattgagaataaacagtttgccatcattttcctcttgaaggacaatggtttcatcattagacttcaaggagacaatg |
32762771 |
T |
|
| Q |
587 |
aaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgca |
667 |
Q |
| |
|
|||||| | |||||||||||||| | ||||||||| |||||| ||| ||| |||| |||||| |||||||||||||||| |
|
|
| T |
32762770 |
aaggagccaccataagaaaatttgatgtgagaatccctgtgtttatggctgacatggttggacaacacttctgatgatgca |
32762690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 287 - 675
Target Start/End: Complemental strand, 32740160 - 32739772
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaa |
386 |
Q |
| |
|
||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||| |
|
|
| T |
32740160 |
atgcaaatttctaacttgagaggttcagaagaactaaatggaatcacaaggaactttgatgaaagatttgctaaagtaatctgttggacattcttggcaa |
32740061 |
T |
|
| Q |
387 |
atgtgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgc |
486 |
Q |
| |
|
| | ||| |||| ||| |||| |||| ||| ||| || |||| ||||||||| |||||||||| | |||||||| |||||||| |||||| || |
|
|
| T |
32740060 |
aagagtgtaatttcagtttacatatctgagacgtagccaatatatcgtaactatactcagactcagaagcgtctggaccaaagcagcaaatattgacagc |
32739961 |
T |
|
| Q |
487 |
gtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatg |
586 |
Q |
| |
|
||||| || | | ||||| |||| ||||| ||||||| || | |||| |||| |||| ||||||||| ||||||||||||||| |||||||||| || | |
|
|
| T |
32739960 |
atttcctaacaacgtagtactattattgagaataaatagtttgtcatcattttcctctcgaagaacaatggtttcatcattagacttcaaggagataacg |
32739861 |
T |
|
| Q |
587 |
aaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgcaacgaagtc |
675 |
Q |
| |
|
||||| ||| ||| |||||||||| || | |||||||| ||||| ||| |||||| | |||| ||||||||||||| |||| ||||| |
|
|
| T |
32739860 |
aaggattgaccattagaaaatttgatttgcgaatccccatgtttatggcagaaatgcatagacaacacttctgatgattcaacaaagtc |
32739772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 287 - 667
Target Start/End: Complemental strand, 32767970 - 32767590
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaa |
386 |
Q |
| |
|
||||||||||||| || ||| ||||||||| | |||| |||||||||||||| || ||||| ||||||| ||||||| ||| |||||||| ||||||| |
|
|
| T |
32767970 |
atgcaaatttctagcttgagtggttcagaagagccaactggaatcacaaggagctctgatggaagagttgctaaagtaaactgctggacatttttcacaa |
32767871 |
T |
|
| Q |
387 |
atgtgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgc |
486 |
Q |
| |
|
| | || |||| ||| || | ||| ||| | ||| || |||| |||||||||| ||||||||| || || |||||||||||||||| || |||||| |
|
|
| T |
32767870 |
aagactgtaatttcagtttgcatgtctgagacctagccaatatatcataactatactcggactcagaggagttaggaccaatgcagcaaatatagactgc |
32767771 |
T |
|
| Q |
487 |
gtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatg |
586 |
Q |
| |
|
||||| ||||| |||||| |||| ||||| ||||||| || |||||| |||| ||| |||||||||| || || |||||| || || |||||||||||| |
|
|
| T |
32767770 |
atttcctaaaagtatagtactattattgagaataaatagtttgccatcattttcctcctgaagaacaatggcttgatcattggactttaaggagacaatg |
32767671 |
T |
|
| Q |
587 |
aaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgca |
667 |
Q |
| |
|
||||||||| ||||| ||||||| || |||||| || ||||||| || |||||||| |||||| ||||||||||| |||| |
|
|
| T |
32767670 |
aaggagtgaccataattaaatttgatttgagaattccggtgttttcggctgaaatggttggacaacacttctgatgttgca |
32767590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 25 - 209
Target Start/End: Complemental strand, 25477867 - 25477683
Alignment:
| Q |
25 |
tagttgattaccggaaaagatcagacgttgatcgattattgcgtacttttccttgttaaaaatcttctccttcacactgtatatcgtgtctgaactctta |
124 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||| | | | |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
25477867 |
tagttgcttaccggaaaatatcagacgttgatcgttcacttggtacttttccttgtcaaaaatcttctccttcacactgtctatcgtgtctgaactctta |
25477768 |
T |
|
| Q |
125 |
accctcaagggtaacacctttccatccagcttctttatgaatatttgcatctgtaccacaattgccaacacagtaatcaatgata |
209 |
Q |
| |
|
||||||||||| | |||||| | |||| |||||||||||||| ||||||| ||| |||||||||||||| |||||||||||| |
|
|
| T |
25477767 |
accctcaaggggatcaccttactttccatggtctttatgaatattagcatctgcaccgcaattgccaacacattaatcaatgata |
25477683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 465 - 669
Target Start/End: Original strand, 32558074 - 32558278
Alignment:
| Q |
465 |
caatgcagcaaacattgactgcgtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatc |
564 |
Q |
| |
|
||||||||| || ||||||||| ||||||| |||||||||| |||| ||||| |||||| || ||||| |||| ||||||||||||| | | |||||| |
|
|
| T |
32558074 |
caatgcagctaatattgactgcatttcccagaagcatagtactattattgagagtaaatagtttcccatcattttcctcttgaagaacagcagcttcatc |
32558173 |
T |
|
| Q |
565 |
attagaattcaaggagacaatgaaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgat |
664 |
Q |
| |
|
|||||||||||| |||||| ||||||||||| |||||||||||| | || |||| ||||||||||| ||| |||||||| |||||| ||||||| |||| |
|
|
| T |
32558174 |
attagaattcaacgagacagtgaaggagtgaccataagaaaattcgattagagagtccccgtgtttatggttgaaatggttggacaacacttctaatgag |
32558273 |
T |
|
| Q |
665 |
gcaac |
669 |
Q |
| |
|
||||| |
|
|
| T |
32558274 |
gcaac |
32558278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 308 - 630
Target Start/End: Complemental strand, 32858298 - 32857976
Alignment:
| Q |
308 |
ggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaaatgtgtgaaattccagcttac |
407 |
Q |
| |
|
|||||| || |||||||||||||||||||| ||| ||||||||||||| ||||||| | ||||||| | |||||||| | || |||| || || | |
|
|
| T |
32858298 |
ggttcaaaagaaccaaatggaatcacaaggcactctgatgaaagagttgctaaagtaaaccgttggacgtatttcacaaaagactgtaatttcaatttgc |
32858199 |
T |
|
| Q |
408 |
tcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgcgtttcccaaaagcatagtaat |
507 |
Q |
| |
|
|||| ||| | ||| | |||| | |||||||| |||| ||| |||| || ||||||||||| |||| ||| ||||| ||||| ||| || |||| | |
|
|
| T |
32858198 |
atatctgagacctagccgatatatcagaactatacttggattcacaagagttaggaccaatgcaacaaatattaactgcatttcctaaactcagagtact |
32858099 |
T |
|
| Q |
508 |
atttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatgaaggagtgatcataagaaaat |
607 |
Q |
| |
|
||| ||||| ||||||| || |||||| |||| || ||||||||||| ||||||| | ||||| |||||||||||||||||||||||| |||| |||||| |
|
|
| T |
32858098 |
attattgagaataaatagtttgccatcattttccttttgaagaacaatggtttcaactttagacttcaaggagacaatgaaggagtgaccatacgaaaat |
32857999 |
T |
|
| Q |
608 |
ttgtttcgagaatccccgtgttt |
630 |
Q |
| |
|
| | || ||||||||| |||||| |
|
|
| T |
32857998 |
tggatttgagaatccctgtgttt |
32857976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 453 - 669
Target Start/End: Original strand, 32656262 - 32656478
Alignment:
| Q |
453 |
aagattttggaccaatgcagcaaacattgactgcgtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaac |
552 |
Q |
| |
|
|||| ||||||||||| ||||||| ||||| || |||||||||||| ||| |||| ||||| ||||||| || ||||| ||| |||||||| ||| |
|
|
| T |
32656262 |
aagagtttggaccaatacagcaaatattgatagcatttcccaaaagcgtagctctattattgagaataaatagtttgccataactttcctcttgaaaaac |
32656361 |
T |
|
| Q |
553 |
aacggtttcatcattagaattcaaggagacaatgaaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagc |
652 |
Q |
| |
|
|| ||||||||| ||||| |||||||||||| ||||||||| | |||||||||||||| || |||||||| |||||| | | ||||||| | |||| | |
|
|
| T |
32656362 |
aatggtttcatccttagacttcaaggagacattgaaggagtcaccataagaaaatttgatttgagaatccttgtgtttatcgctgaaatgcttagacaac |
32656461 |
T |
|
| Q |
653 |
acttctgatgatgcaac |
669 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
32656462 |
acttcggatgatgcaac |
32656478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 453 - 675
Target Start/End: Original strand, 32662149 - 32662371
Alignment:
| Q |
453 |
aagattttggaccaatgcagcaaacattgactgcgtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaac |
552 |
Q |
| |
|
|||| ||||||||||| ||||||| ||||| || ||||||||||| ||| |||| | ||| ||||||| || ||||| ||| |||||||| ||| |
|
|
| T |
32662149 |
aagagtttggaccaatacagcaaatattgatagcatttcccaaaagtgtagctctattatagagaataaatagtttgccataagtttcctcttgaaaaac |
32662248 |
T |
|
| Q |
553 |
aacggtttcatcattagaattcaaggagacaatgaaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagc |
652 |
Q |
| |
|
|| ||||||||||||||| || | | ||||||| ||||||||| |||||||||||||| | |||||||||||||||| | | ||||||| | |||| | |
|
|
| T |
32662249 |
aatggtttcatcattagacttgatgtagacaattaaggagtgaccataagaaaatttgatatgagaatccccgtgtttatcgctgaaatgcttagacaac |
32662348 |
T |
|
| Q |
653 |
acttctgatgatgcaacgaagtc |
675 |
Q |
| |
|
||||||||||||||||| ||||| |
|
|
| T |
32662349 |
acttctgatgatgcaacaaagtc |
32662371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 287 - 674
Target Start/End: Original strand, 32651841 - 32652228
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaa |
386 |
Q |
| |
|
||||||||||||| || |||||||||||| |||||||||||||||||||||||| |||||||||| || ||||||| |||||| || ||| ||| |
|
|
| T |
32651841 |
atgcaaatttctagcttcagaggttcagaagaaccaaatggaatcacaaggaactctgatgaaagatttgctgaagtaacacgttggaaatccttaccaa |
32651940 |
T |
|
| Q |
387 |
atgtgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgc |
486 |
Q |
| |
|
| | || |||| ||| || | ||||| ||| | ||| || |||| ||||||||| ||||| || | ||||||||||||| ||||| ||||||||| |
|
|
| T |
32651941 |
aagactgtaatttcagtttgcacatctcagacctagccaatatatcataactatattcagactcgtaaaagtttggaccaatgccgcaaatattgactgc |
32652040 |
T |
|
| Q |
487 |
gtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatg |
586 |
Q |
| |
|
||||||| ||||||| |||| |||| ||||| || ||||| |||||||| ||||| ||||| ||| ||||| ||||||||||||||| |
|
|
| T |
32652041 |
atttcccatttgcatagttttattactgagatcaaatagtttgccataacccgcctcttgaaaaacaatggtttgatcgttagacttcaaggagacaatg |
32652140 |
T |
|
| Q |
587 |
aaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgcaacgaagt |
674 |
Q |
| |
|
||||| ||| ||||| |||||||| || ||| ||||| ||||| | | ||||||| | |||||||||||||||||||||| |||| |
|
|
| T |
32652141 |
aaggaatgaccataaaaaaatttgatttgagtatccctttgtttattgctgaaatgcttatacagcacttctgatgatgcaacaaagt |
32652228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 541 - 675
Target Start/End: Complemental strand, 32710005 - 32709871
Alignment:
| Q |
541 |
ctcttgaagaacaacggtttcatcattagaattcaaggagacaatgaaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaa |
640 |
Q |
| |
|
|||||||||||||| || ||| |||||| | || ||||||||||||||||||||| ||||||||||| || || || ||||| |||||| ||| ||||| |
|
|
| T |
32710005 |
ctcttgaagaacaatggcttcgtcattaaactttaaggagacaatgaaggagtgaccataagaaaatgtgctttgaaaatccttgtgtttatggctgaaa |
32709906 |
T |
|
| Q |
641 |
tggctggacagcacttctgatgatgcaacgaagtc |
675 |
Q |
| |
|
|| |||||| |||||||||||| ||||| ||||| |
|
|
| T |
32709905 |
tgattggacaacacttctgatgaggcaacaaagtc |
32709871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 25477577 - 25477534
Alignment:
| Q |
223 |
ggggaaaaaacaaagtaaagaaaaggatataggaggtaccatgg |
266 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25477577 |
ggggaaaaaacaaagtaaagaaaaggatataggaggtaccatgg |
25477534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 32660658 - 32660796
Alignment:
| Q |
70 |
cttttccttgttaaaaatcttctccttcacactg--tatatcgtgtctgaactcttaaccctcaagggtaacacctttccatccagcttctttatgaata |
167 |
Q |
| |
|
|||||||| || |||||||||||||||||||||| ||||| |||| |||||| |||||||||||||| | ||||| | || || ||||||| | |
|
|
| T |
32660658 |
cttttcctcgtcaaaaatcttctccttcacactgattatattgtgtatgaactattaaccctcaaggggatattctttctagtcatggtcattatgaaaa |
32660757 |
T |
|
| Q |
168 |
tttgcatctgtaccacaattgccaacacagtaatcaatg |
206 |
Q |
| |
|
|||||||||| | | |||||||||||||| ||||||||| |
|
|
| T |
32660758 |
tttgcatctgcatcgcaattgccaacacattaatcaatg |
32660796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 32748086 - 32748035
Alignment:
| Q |
156 |
tctttatgaatatttgcatctgtaccacaattgccaacacagtaatcaatga |
207 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||||||||| |||||||||| |
|
|
| T |
32748086 |
tctttatgaatatttgcatctgcaccgcaattgccaacacattaatcaatga |
32748035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 32752130 - 32752079
Alignment:
| Q |
156 |
tctttatgaatatttgcatctgtaccacaattgccaacacagtaatcaatga |
207 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||| |||||||||| |
|
|
| T |
32752130 |
tctttatgaatatttgcatctgtgccgcaattgccaacacattaatcaatga |
32752079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 32858955 - 32858859
Alignment:
| Q |
32 |
ttaccggaaaagatcagacgttgatcgattattgcgtacttttccttgttaaaaatcttctccttcacactgtatatcgtgtctgaactcttaaccc |
128 |
Q |
| |
|
||||||||||| ||||||||||| || ||||| | |||||||||| || |||| ||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
32858955 |
ttaccggaaaatatcagacgttggccgtgtattggtaatttttccttgtcaagaatcatctccttcacattgactatcgtgtctgaactcttaaccc |
32858859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 32655772 - 32655820
Alignment:
| Q |
160 |
tatgaatatttgcatctgtaccacaattgccaacacagtaatcaatgat |
208 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||| |||||| |||| |
|
|
| T |
32655772 |
tatgaatatttgcatctgcaccgcaattgccaacacattaatcagtgat |
32655820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 32656096 - 32656164
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagtt |
355 |
Q |
| |
|
||||||||||||| || ||||| |||| || ||||||||||||||||||| |||| || ||||||||| |
|
|
| T |
32656096 |
atgcaaatttctagcttgagagcttcaaaagaaccaaatggaatcacaagcaactccgacgaaagagtt |
32656164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 32740226 - 32740175
Alignment:
| Q |
214 |
aatttaataggggaaaaaacaaagtaaagaaaaggatataggaggtaccatgg |
266 |
Q |
| |
|
||||||||||| ||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
32740226 |
aatttaatagga-aaataacaaagcaaagaaaaggatataggaggtaccatgg |
32740175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 32763132 - 32763076
Alignment:
| Q |
211 |
aagaatttaataggggaaaaaacaaa-gtaaagaaaaggatataggaggtaccatgg |
266 |
Q |
| |
|
|||| |||||| |||||||||||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
32763132 |
aagactttaattggggaaaaaacaaaagcaaagaaaaggagataggaggtaccatgg |
32763076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 32763402 - 32763290
Alignment:
| Q |
73 |
ttccttgttaaaaatcttctccttcacactgtatatcgtgtctgaactcttaaccctcaagggtaacacctttccatccagcttctttatgaatatttgc |
172 |
Q |
| |
|
|||||||| || |||||| | ||||||| | | ||| ||||||||||||| |||||||||||| | || ||||||| ||| | |||| | | |||||| |
|
|
| T |
32763402 |
ttccttgtcaagaatctttttcttcacattttctattgtgtctgaactctcaaccctcaaggggatcatctttccagtcaggtcttttacgtagatttgc |
32763303 |
T |
|
| Q |
173 |
atctgtaccacaa |
185 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
32763302 |
atctgcaccacaa |
32763290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 133; Significance: 8e-69; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 287 - 675
Target Start/End: Original strand, 7969922 - 7970310
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaa |
386 |
Q |
| |
|
|||||||| |||| || ||||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| |||||| ||| |
|
|
| T |
7969922 |
atgcaaatgtctagcttgagaggttcagaagaacgaaatggaatcacaaggaactctgatgaaagagttgctaaagtaaactgttggacgttcttcgcaa |
7970021 |
T |
|
| Q |
387 |
atgtgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgc |
486 |
Q |
| |
|
| | || |||| ||| || | |||| ||| ||| | |||| |||||||||| |||| ||||||| || |||||||||||||||| ||||||||| |
|
|
| T |
7970022 |
aagactgtaatttcagtttgcatatctcagacttagccgatatatcataactatactcggacccagaagagttaggaccaatgcagcaaatattgactgc |
7970121 |
T |
|
| Q |
487 |
gtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatg |
586 |
Q |
| |
|
||||||||| ||||||| | || || || ||||||| || || || |||| |||||||||||||| ||||||| ||||||| |||||||||||||| |
|
|
| T |
7970122 |
ttttcccaaactcatagtattgttatttagaataaatagttttccgtcattttcctcttgaagaacaatggtttcaccattagacatcaaggagacaatg |
7970221 |
T |
|
| Q |
587 |
aaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgcaacgaagtc |
675 |
Q |
| |
|
||||||||| |||||||||||| | || |||||||||| ||||| ||| |||||||| |||||| |||||||||||| ||||| ||||| |
|
|
| T |
7970222 |
aaggagtgaccataagaaaattcgatttgagaatccccatgtttatggctgaaatggttggacaacacttctgatgacgcaacaaagtc |
7970310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 287 - 675
Target Start/End: Complemental strand, 37577189 - 37576801
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaa |
386 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||| | |||| ||||||||| ||| |
|
|
| T |
37577189 |
atgcaaatttctagctcgagaggttcagaagaaccaaatggaatcacaaggaactctaatgaaagagttgataaagtaaaccgttgcacattcttcgcaa |
37577090 |
T |
|
| Q |
387 |
atgtgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgc |
486 |
Q |
| |
|
| | ||||||| | | || | | ||| | ||| || |||| ||||| | || | ||| |||||| ||||||| |||||| |||| ||||| ||| |
|
|
| T |
37577089 |
acgactgaaatttcggtttgcatgcttgagatctagccaatatatcataaccacactcgtactgagaagactttggactaatgcaacaaatattgattgc |
37576990 |
T |
|
| Q |
487 |
gtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatg |
586 |
Q |
| |
|
||||| |||||||||||| |||| ||||| ||||||| || |||| | || |||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
37576989 |
atttccaaaaagcatagtactattattgagaataaatagtttgccaacattattctcttgaagaacaatagtttcatcattagacttcaaggagacaata |
37576890 |
T |
|
| Q |
587 |
aaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgcaacgaagtc |
675 |
Q |
| |
|
| ||| || |||||||||| ||| | |||||||||||||||| ||| ||||||| | |||| |||||||||||||||||| ||||| |
|
|
| T |
37576889 |
acggacagaccataagaaaacttggtctgagaatccccgtgtttatggctgaaatgcttagacaacacttctgatgatgcaacaaagtc |
37576801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 32895123 - 32895003
Alignment:
| Q |
85 |
aatcttctccttcacactgtatatcgtgtctgaactcttaaccctcaagggtaacacctttccatccagcttctttatgaatatttgcatctgtaccaca |
184 |
Q |
| |
|
|||||||||| | ||| || ||||| ||||||||||||||||| ||| ||| ||| || |||| || | ||| |||||||||||||||||| ||| || |
|
|
| T |
32895123 |
aatcttctccattacattgaatatcctgtctgaactcttaaccatcagggggaacctctctccaccctgggtctctatgaatatttgcatctgcaccgca |
32895024 |
T |
|
| Q |
185 |
attgccaacacagtaatcaat |
205 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
32895023 |
attgccaacacattaatcaat |
32895003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 7969502 - 7969547
Alignment:
| Q |
83 |
aaaatcttctccttcacactgtatatcgtgtctgaactcttaaccc |
128 |
Q |
| |
|
|||||||||||||||||| || ||| ||||||||||||||||||| |
|
|
| T |
7969502 |
aaaatcttctccttcacattgcctattgtgtctgaactcttaaccc |
7969547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 37577236 - 37577195
Alignment:
| Q |
225 |
ggaaaaaacaaagtaaagaaaaggatataggaggtaccatgg |
266 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
37577236 |
ggaaaaaaacaagcaaagaaaaggatataggaggtaccatgg |
37577195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 133; Significance: 8e-69; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 287 - 667
Target Start/End: Complemental strand, 17583570 - 17583190
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaa |
386 |
Q |
| |
|
|||||||| |||| || ||||||||||||| ||||||||||||||||||| |||| ||||||||||||| |||| |||||||||||| |||||||| | |
|
|
| T |
17583570 |
atgcaaatatctagcttgagaggttcagaagaaccaaatggaatcacaagcaactctgatgaaagagttgctaaaggaacctgttggacgttcttcacga |
17583471 |
T |
|
| Q |
387 |
atgtgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgc |
486 |
Q |
| |
|
| | || |||| ||| || |||| ||| | ||| || |||| ||||||||| |||||||||||| || |||||||||||||||| ||||||||| |
|
|
| T |
17583470 |
aagactgtaatttcagtttggatatctgagacctagccaatatatcataactatagtcggactcagaagagttaggaccaatgcagcaaagattgactgc |
17583371 |
T |
|
| Q |
487 |
gtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatg |
586 |
Q |
| |
|
||||||||||||||| | |||| ||||| ||||||| || ||||| |||| |||||||||||||| ||||||||||||||| |||| ||||||| || |
|
|
| T |
17583370 |
atttcccaaaagcatacttctattattgagaataaatagtttaccatcattttcctcttgaagaacaatggtttcatcattagacttcatggagacagtg |
17583271 |
T |
|
| Q |
587 |
aaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgca |
667 |
Q |
| |
|
||||| ||| |||||||||||||| || ||||||| || ||||| ||| |||| ||| |||||| || |||||| |||||| |
|
|
| T |
17583270 |
aaggactgaccataagaaaatttgatttgagaatcaccatgtttatggctgaagtggttggacaacaattctgacgatgca |
17583190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 287 - 667
Target Start/End: Complemental strand, 17591477 - 17591097
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaa |
386 |
Q |
| |
|
|||||||| |||| || ||||||||||||| ||||||||||||||||||| |||| ||||||||||||| |||||||| |||||||| |||||| ||| |
|
|
| T |
17591477 |
atgcaaatatctagcttgagaggttcagaagaaccaaatggaatcacaagcaactctgatgaaagagttgctaaagtaacttgttggacgttcttcgcaa |
17591378 |
T |
|
| Q |
387 |
atgtgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgc |
486 |
Q |
| |
|
| | || |||| ||| | | ||| ||| | ||| || |||| |||| |||| ||||||||||||| || |||||||||||||||| ||||||||| |
|
|
| T |
17591377 |
aagactgtaatttcagtatgcaattctgagacctagccaatatatcataattatagttggactcagaagagttaggaccaatgcagcaaagattgactgc |
17591278 |
T |
|
| Q |
487 |
gtttcccaaaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatg |
586 |
Q |
| |
|
|||||||||||| |||| |||| ||||| ||||||| || ||||| |||| |||||||||||||| ||||||||||||| |||||||||||| || |
|
|
| T |
17591277 |
atttcccaaaagcgtagttctattattgagaataaatagtttaccatcattttcctcttgaagaacaataatttcatcattagacttcaaggagacagtg |
17591178 |
T |
|
| Q |
587 |
aaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgca |
667 |
Q |
| |
|
||||||| | |||||||||||||| || ||||||||| ||||| || |||||||| |||||| |||||||||||||||| |
|
|
| T |
17591177 |
aaggagtaaccataagaaaatttgattatagaatccccatgtttatgcctgaaatggttggacaacacttctgatgatgca |
17591097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 428 - 675
Target Start/End: Complemental strand, 21524479 - 21524232
Alignment:
| Q |
428 |
atattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgcgtttcccaaaagcatagtaatatttttgaggataaataatt |
527 |
Q |
| |
|
|||| |||||||||| |||||||| |||| || |||||||||| |||| ||| ||||| ||||| ||| ||||||| |||| ||||| ||||||| || |
|
|
| T |
21524479 |
atatcataactatacttggactcaaaagagttatgaccaatgcaacaaatattaactgcatttcctaaactcatagtactattattgagaataaatagtt |
21524380 |
T |
|
| Q |
528 |
ggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatgaaggagtgatcataagaaaatttgtttcgagaatccccgtg |
627 |
Q |
| |
|
|||||| |||| |||||||||||||| ||||||| | ||||| ||||||||||||||||||||||| |||| ||||||||| || ||||||||| ||| |
|
|
| T |
21524379 |
tgccatcattttcctcttgaagaacaatggtttcaactttagacttcaaggagacaatgaaggagtggccatacgaaaatttgatttgagaatccctgtg |
21524280 |
T |
|
| Q |
628 |
tttttggatgaaatggctggacagcacttctgatgatgcaacgaagtc |
675 |
Q |
| |
|
||| | |||||||| | |||| |||||||||||||||||| ||||| |
|
|
| T |
21524279 |
tttaaagctgaaatggtttgacaacacttctgatgatgcaacaaagtc |
21524232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 669
Target Start/End: Complemental strand, 16752551 - 16752163
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaa |
386 |
Q |
| |
|
||||||||||||| || |||||||| ||| ||||| |||||||| |||||||| || |||||||||| ||||||||||||||||||||| | |||| |
|
|
| T |
16752551 |
atgcaaatttctagcttgagaggtttggaagaaccatttggaatcataaggaactctggtgaaagagttcctaaagtaacctgttggacattcgttacaa |
16752452 |
T |
|
| Q |
387 |
atgtgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgc |
486 |
Q |
| |
|
| | ||| |||| ||| || | ||| ||| | || ||| |||||||||| |||||| |||| |||||||||| |||||||| ||||||||| |
|
|
| T |
16752451 |
aagagtgtaatttcagtttgcatctctgagacctggccttgataccataactatactcggactcggaagcatttggaccaaagcagcaaatattgactgc |
16752352 |
T |
|
| Q |
487 |
gtttcccaaaagc------atagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggag |
580 |
Q |
| |
|
|| ||||||||| |||||| |||| |||| ||||||| || |||||| | |||||||||||||| || | ||||||| ||| ||||||||| |
|
|
| T |
16752351 |
attccccaaaagcgtagtgatagtactattaatgagaataaatagtttgccatcatatttctcttgaagaataattgcatcatcatcagacttcaaggag |
16752252 |
T |
|
| Q |
581 |
acaatgaaggagtgatcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgcaac |
669 |
Q |
| |
|
|||||||| || ||| |||||||||||||| || |||||||| ||||||| | | |||||||| |||||| ||| |||||||| ||||| |
|
|
| T |
16752251 |
acaatgaaagattgaccataagaaaatttgatttgagaatcctcgtgtttattgctgaaatggttggacaacacctctgatgaggcaac |
16752163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 287 - 505
Target Start/End: Complemental strand, 16757056 - 16756838
Alignment:
| Q |
287 |
atgcaaatttctatctcgagaggttcagaaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacctgttggacattcttcacaa |
386 |
Q |
| |
|
||||||||| | | |||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| |||||||| || || | |||||| ||| |
|
|
| T |
16757056 |
atgcaaattacaagctcgagaggttcagaagaaccaattggaatcacaaggaactctgatgaaagagttgctaaagtaacttgatgcaaattctttgcaa |
16756957 |
T |
|
| Q |
387 |
atgtgtgaaattccagcttactcatcttagaacaagctaaaatattataactatacctggactcagaagattttggaccaatgcagcaaacattgactgc |
486 |
Q |
| |
|
| | ||| |||| ||| || | ||| ||| | ||| | |||| |||||||||| |||| |||||| ||||||||| ||| |||| ||||||||| |
|
|
| T |
16756956 |
acgagtgtaatttcagtttgcatttctgagacctagccgatatatcataactatactcggacacagaagcagttggaccaaagcaacaaatattgactgc |
16756857 |
T |
|
| Q |
487 |
gtttcccaaaagcatagta |
505 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
16756856 |
atttcccaaaagcatagta |
16756838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 675
Target Start/End: Complemental strand, 16756818 - 16756638
Alignment:
| Q |
495 |
aaagcatagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatgaaggagtg |
594 |
Q |
| |
|
||||||||||| |||| ||||| ||||||| || |||| ||||||||||||||||| | |||||||| ||| ||||||||||||| || || |
|
|
| T |
16756818 |
aaagcatagtactattattgagaataaatactttgccactacgtttctcttgaagaacaatgacttcatcatcagacttcaaggagacaagaaaagaaaa |
16756719 |
T |
|
| Q |
595 |
atcataagaaaatttgtttcgagaatccccgtgtttttggatgaaatggctggacagcacttctgatgatgcaacgaagtc |
675 |
Q |
| |
|
||||| |||| ||| || |||||||| ||||||| ||| |||||||| ||||| ||| |||||||| ||||| ||||| |
|
|
| T |
16756718 |
tccataataaaaattgatttgagaatcctcgtgtttatggctgaaatggtcggacaacacctctgatgaagcaacaaagtc |
16756638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 16752885 - 16752844
Alignment:
| Q |
85 |
aatcttctccttcacactgtatatcgtgtctgaactcttaac |
126 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
16752885 |
aatctgctccttcacactgaatatcgtgtctaaactcttaac |
16752844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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