View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10269_low_16 (Length: 297)
Name: NF10269_low_16
Description: NF10269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10269_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 8 - 281
Target Start/End: Original strand, 47640947 - 47641220
Alignment:
| Q |
8 |
caatgcgcggacagttctctgtgaagtcagatgtgtttagcttcggtgtcttagttttggaaatcgttagtggcaagaagaataccgatttaaatcaaag |
107 |
Q |
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| T |
47640947 |
caatgcgcggacagttctctgtgaagtcagatgtgtttagcttcggtgtcttagttttggaaatcgttagtggcaagaagaataccgatttaaatcaaag |
47641046 |
T |
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| Q |
108 |
gaatcatactgatgatctcttaagctatgtgagtataaataagtgtaannnnnnnaatttgctcttttgatgcaatcaaagctaaaaggcaatttcaatg |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47641047 |
gaatcatactgatgatctcttaagctatgtgagtataaataagtgtaatttttttagtttgctcttttgatgcaatcaaagctaaaaggcaatttcaatg |
47641146 |
T |
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| Q |
208 |
ggtgaggaacgagagattgaaaagtttaaatactgacatactagtatgtatttaccataggcttggaaaaaatg |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47641147 |
ggtgaggaacgagagattgaaaagtttaaatactgacatactagtatgtatttaccataggcttggaaaaaatg |
47641220 |
T |
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