View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10269_low_19 (Length: 256)

Name: NF10269_low_19
Description: NF10269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10269_low_19
NF10269_low_19
[»] chr5 (40 HSPs)
chr5 (1-238)||(35807632-35807863)
chr5 (75-124)||(40445991-40446038)
chr5 (68-131)||(22498943-22499003)
chr5 (77-144)||(42168931-42168996)
chr5 (68-130)||(781864-781924)
chr5 (68-116)||(8545003-8545049)
chr5 (68-128)||(23118053-23118111)
chr5 (99-131)||(3222761-3222793)
chr5 (68-131)||(3671219-3671280)
chr5 (59-146)||(7630160-7630245)
chr5 (68-115)||(8639344-8639389)
chr5 (56-147)||(15889400-15889489)
chr5 (64-127)||(17145351-17145412)
chr5 (97-149)||(31708127-31708179)
chr5 (68-114)||(18147571-18147615)
chr5 (77-147)||(790129-790198)
chr5 (97-147)||(1642362-1642412)
chr5 (97-131)||(5107244-5107278)
chr5 (61-130)||(8882399-8882466)
chr5 (97-127)||(11017204-11017234)
chr5 (99-145)||(16071394-16071440)
chr5 (60-129)||(17144472-17144539)
chr5 (68-129)||(18391601-18391660)
chr5 (102-147)||(2475341-2475386)
chr5 (102-147)||(4374924-4374969)
chr5 (102-147)||(5589534-5589579)
chr5 (102-147)||(6928427-6928472)
chr5 (75-127)||(11647205-11647255)
chr5 (80-128)||(25607060-25607106)
chr5 (68-140)||(39914902-39914971)
chr5 (77-128)||(2705518-2705567)
chr5 (68-131)||(6489008-6489069)
chr5 (68-123)||(16133072-16133125)
chr5 (97-129)||(17465396-17465428)
chr5 (68-147)||(25603983-25604060)
chr5 (75-129)||(27479631-27479684)
chr5 (68-147)||(32200430-32200507)
chr5 (68-127)||(34702491-34702548)
chr5 (68-127)||(35109401-35109458)
chr5 (68-115)||(43108570-43108615)
[»] chr3 (52 HSPs)
chr3 (61-147)||(21914054-21914138)
chr3 (61-139)||(45096020-45096096)
chr3 (61-130)||(25505701-25505768)
chr3 (68-147)||(30200827-30200904)
chr3 (77-147)||(35191800-35191868)
chr3 (61-133)||(17588356-17588426)
chr3 (99-139)||(41990575-41990615)
chr3 (61-130)||(53207964-53208031)
chr3 (75-147)||(1111824-1111894)
chr3 (75-131)||(27397611-27397665)
chr3 (66-126)||(39100420-39100478)
chr3 (68-148)||(51250215-51250293)
chr3 (68-139)||(13042791-13042860)
chr3 (68-139)||(13050868-13050937)
chr3 (99-147)||(20400107-20400155)
chr3 (68-147)||(38573556-38573633)
chr3 (68-130)||(1149069-1149129)
chr3 (78-124)||(1456546-1456590)
chr3 (77-147)||(4216383-4216450)
chr3 (99-146)||(7101777-7101823)
chr3 (97-128)||(42074131-42074162)
chr3 (77-131)||(54230098-54230150)
chr3 (61-139)||(55126000-55126076)
chr3 (60-129)||(5702179-5702245)
chr3 (97-131)||(8075813-8075847)
chr3 (97-127)||(8139743-8139773)
chr3 (97-131)||(13829076-13829110)
chr3 (97-127)||(14771359-14771389)
chr3 (59-116)||(33771682-33771737)
chr3 (97-147)||(34899125-34899175)
chr3 (66-127)||(39869810-39869869)
chr3 (97-131)||(45885476-45885510)
chr3 (97-147)||(46226008-46226058)
chr3 (61-130)||(53681877-53681944)
chr3 (75-127)||(7829904-7829954)
chr3 (75-127)||(12976605-12976655)
chr3 (68-132)||(21513289-21513351)
chr3 (61-109)||(22462306-22462352)
chr3 (102-147)||(30269151-30269196)
chr3 (102-147)||(41990832-41990877)
chr3 (68-148)||(43796819-43796897)
chr3 (97-130)||(46253897-46253930)
chr3 (68-127)||(5117209-5117266)
chr3 (95-131)||(6835850-6835886)
chr3 (68-127)||(19468452-19468509)
chr3 (68-139)||(23147969-23148038)
chr3 (99-131)||(24273653-24273685)
chr3 (61-132)||(33745093-33745162)
chr3 (68-131)||(38130958-38131019)
chr3 (69-124)||(49975811-49975864)
chr3 (68-131)||(52119377-52119438)
chr3 (68-127)||(53996300-53996357)
[»] chr7 (40 HSPs)
chr7 (68-147)||(6384852-6384929)
chr7 (61-147)||(40187619-40187703)
chr7 (68-148)||(20103436-20103514)
chr7 (77-130)||(31533393-31533446)
chr7 (61-128)||(38911293-38911358)
chr7 (61-139)||(41250038-41250114)
chr7 (77-130)||(7872748-7872799)
chr7 (78-139)||(19793532-19793591)
chr7 (75-136)||(31723398-31723457)
chr7 (68-149)||(37235312-37235391)
chr7 (68-148)||(46987087-46987165)
chr7 (68-131)||(35142148-35142209)
chr7 (77-147)||(2618689-2618757)
chr7 (61-131)||(2916096-2916164)
chr7 (97-148)||(6768689-6768740)
chr7 (77-147)||(10423971-10424039)
chr7 (77-147)||(18714458-18714526)
chr7 (97-132)||(25923419-25923454)
chr7 (75-129)||(35165541-35165593)
chr7 (97-139)||(20085750-20085792)
chr7 (68-129)||(21050223-21050282)
chr7 (75-139)||(1399170-1399232)
chr7 (75-147)||(10236888-10236958)
chr7 (102-147)||(23639482-23639527)
chr7 (68-124)||(30296334-30296388)
chr7 (68-124)||(37230034-37230088)
chr7 (102-147)||(37669336-37669381)
chr7 (102-147)||(43156153-43156198)
chr7 (68-116)||(48527191-48527237)
chr7 (97-137)||(3532609-3532649)
chr7 (77-144)||(3532995-3533059)
chr7 (68-139)||(5458062-5458131)
chr7 (68-131)||(5579694-5579755)
chr7 (77-116)||(22777373-22777410)
chr7 (99-147)||(23069840-23069888)
chr7 (61-116)||(27544951-27545004)
chr7 (68-147)||(39801707-39801784)
chr7 (68-139)||(39926529-39926598)
chr7 (68-127)||(41029273-41029330)
chr7 (68-147)||(48007530-48007607)
[»] chr4 (57 HSPs)
chr4 (68-147)||(7371531-7371608)
chr4 (61-147)||(46676481-46676565)
chr4 (68-139)||(17216120-17216189)
chr4 (68-131)||(19908693-19908754)
chr4 (61-147)||(11269688-11269772)
chr4 (61-147)||(18635524-18635608)
chr4 (68-130)||(19124622-19124682)
chr4 (62-131)||(24785461-24785528)
chr4 (62-131)||(24822738-24822805)
chr4 (97-147)||(47806239-47806289)
chr4 (59-147)||(11144648-11144734)
chr4 (68-139)||(38416058-38416127)
chr4 (68-131)||(43034341-43034402)
chr4 (78-145)||(1701619-1701685)
chr4 (61-139)||(25978312-25978387)
chr4 (68-130)||(44221448-44221508)
chr4 (97-147)||(37800859-37800909)
chr4 (77-130)||(49308830-49308881)
chr4 (97-146)||(22630344-22630393)
chr4 (80-131)||(11166699-11166748)
chr4 (97-145)||(14542745-14542793)
chr4 (78-129)||(29808269-29808318)
chr4 (61-124)||(29910455-29910516)
chr4 (68-127)||(42316827-42316884)
chr4 (97-136)||(3299088-3299127)
chr4 (61-131)||(6474433-6474501)
chr4 (67-129)||(20403169-20403229)
chr4 (68-130)||(35378187-35378247)
chr4 (61-127)||(56497611-56497675)
chr4 (77-131)||(56551591-56551643)
chr4 (97-147)||(3580742-3580792)
chr4 (68-124)||(4911607-4911660)
chr4 (97-147)||(22164252-22164302)
chr4 (82-139)||(26004647-26004701)
chr4 (97-139)||(29568614-29568656)
chr4 (97-147)||(33758787-33758837)
chr4 (97-131)||(37930846-37930880)
chr4 (75-124)||(39842018-39842065)
chr4 (97-147)||(47018309-47018358)
chr4 (79-132)||(49473657-49473708)
chr4 (97-147)||(49716922-49716972)
chr4 (97-147)||(50442731-50442780)
chr4 (97-131)||(52132301-52132335)
chr4 (102-147)||(1166600-1166645)
chr4 (102-147)||(1169082-1169127)
chr4 (78-127)||(16612650-16612698)
chr4 (68-116)||(29908057-29908103)
chr4 (75-127)||(30380538-30380588)
chr4 (68-116)||(36203237-36203283)
chr4 (77-129)||(43182994-43183044)
chr4 (97-129)||(9990294-9990326)
chr4 (77-124)||(12263262-12263307)
chr4 (68-127)||(12698598-12698655)
chr4 (99-139)||(41222073-41222113)
chr4 (77-124)||(46434766-46434811)
chr4 (70-137)||(56096207-56096272)
chr4 (68-139)||(56564974-56565043)
[»] chr2 (51 HSPs)
chr2 (61-131)||(24393239-24393307)
chr2 (61-131)||(34903511-34903579)
chr2 (68-129)||(40967372-40967431)
chr2 (68-131)||(2256972-2257033)
chr2 (68-123)||(16204824-16204877)
chr2 (68-147)||(24593377-24593454)
chr2 (77-132)||(43117188-43117241)
chr2 (61-139)||(7640652-7640728)
chr2 (77-139)||(12124555-12124615)
chr2 (81-131)||(12413507-12413555)
chr2 (81-131)||(12425567-12425615)
chr2 (61-147)||(19179033-19179117)
chr2 (77-139)||(28163937-28163997)
chr2 (61-127)||(40099387-40099450)
chr2 (75-147)||(9982633-9982701)
chr2 (60-128)||(35727430-35727496)
chr2 (97-146)||(43356526-43356575)
chr2 (77-128)||(5980237-5980286)
chr2 (75-134)||(9389476-9389533)
chr2 (68-147)||(27152354-27152431)
chr2 (68-139)||(39068699-39068768)
chr2 (60-131)||(39761431-39761499)
chr2 (77-139)||(12124694-12124754)
chr2 (77-139)||(25274820-25274880)
chr2 (77-147)||(28771592-28771660)
chr2 (97-139)||(3503002-3503044)
chr2 (70-131)||(9547408-9547467)
chr2 (97-131)||(10723967-10724001)
chr2 (99-145)||(19156149-19156195)
chr2 (68-129)||(37320518-37320577)
chr2 (97-131)||(42475109-42475143)
chr2 (68-124)||(10332281-10332335)
chr2 (61-129)||(19549430-19549496)
chr2 (102-131)||(25048837-25048866)
chr2 (96-129)||(35757401-35757434)
chr2 (103-139)||(2661031-2661067)
chr2 (68-115)||(4897544-4897589)
chr2 (68-115)||(4944938-4944983)
chr2 (77-132)||(7302140-7302192)
chr2 (99-139)||(8920518-8920558)
chr2 (80-131)||(11810381-11810430)
chr2 (99-131)||(12599864-12599896)
chr2 (68-139)||(18324885-18324954)
chr2 (68-127)||(20239344-20239401)
chr2 (68-139)||(20565066-20565135)
chr2 (77-132)||(25186240-25186293)
chr2 (68-115)||(26133535-26133580)
chr2 (68-147)||(28202298-28202375)
chr2 (68-131)||(31815886-31815947)
chr2 (69-148)||(32844865-32844941)
chr2 (77-128)||(35685063-35685112)
[»] scaffold0238 (1 HSPs)
scaffold0238 (62-147)||(25384-25467)
[»] chr8 (22 HSPs)
chr8 (68-147)||(30623294-30623371)
chr8 (66-138)||(9655989-9656059)
chr8 (69-124)||(8442493-8442546)
chr8 (61-139)||(9019555-9019631)
chr8 (61-147)||(19778059-19778143)
chr8 (78-139)||(41430763-41430822)
chr8 (61-133)||(8984491-8984561)
chr8 (77-131)||(1244704-1244756)
chr8 (99-129)||(13032363-13032393)
chr8 (68-139)||(24033257-24033329)
chr8 (68-129)||(27750905-27750964)
chr8 (97-147)||(29499799-29499849)
chr8 (97-147)||(41625222-41625272)
chr8 (68-129)||(42200663-42200722)
chr8 (68-124)||(29186503-29186557)
chr8 (75-131)||(32944839-32944893)
chr8 (97-130)||(38763515-38763548)
chr8 (77-129)||(42208470-42208520)
chr8 (68-131)||(6314322-6314383)
chr8 (77-128)||(9070968-9071017)
chr8 (102-146)||(10290803-10290847)
chr8 (84-131)||(32944942-32944987)
[»] chr1 (48 HSPs)
chr1 (68-131)||(28039859-28039920)
chr1 (97-144)||(22335386-22335433)
chr1 (61-147)||(47528430-47528514)
chr1 (61-146)||(16580783-16580866)
chr1 (60-131)||(18056715-18056784)
chr1 (61-147)||(23405341-23405425)
chr1 (100-147)||(41950067-41950114)
chr1 (97-130)||(29251782-29251815)
chr1 (75-139)||(29987103-29987165)
chr1 (80-128)||(30937488-30937534)
chr1 (60-144)||(38448852-38448934)
chr1 (78-129)||(10132445-10132494)
chr1 (68-127)||(15382822-15382879)
chr1 (68-147)||(19262890-19262967)
chr1 (68-139)||(33153871-33153940)
chr1 (97-139)||(2665293-2665336)
chr1 (77-132)||(3937520-3937575)
chr1 (76-129)||(5033551-5033603)
chr1 (96-131)||(5280658-5280693)
chr1 (61-131)||(6000142-6000210)
chr1 (68-146)||(9398397-9398473)
chr1 (77-147)||(9872088-9872156)
chr1 (77-139)||(13615603-13615663)
chr1 (61-131)||(17221519-17221587)
chr1 (77-147)||(30795711-30795779)
chr1 (97-132)||(33020041-33020076)
chr1 (57-147)||(34366282-34366370)
chr1 (70-147)||(912311-912386)
chr1 (97-139)||(29233965-29234007)
chr1 (97-147)||(32944764-32944814)
chr1 (68-129)||(34766861-34766920)
chr1 (68-129)||(35442856-35442915)
chr1 (97-131)||(35778200-35778234)
chr1 (60-112)||(1408428-1408478)
chr1 (97-146)||(3157701-3157750)
chr1 (61-129)||(9639818-9639884)
chr1 (76-124)||(16033456-16033502)
chr1 (68-124)||(28832177-28832231)
chr1 (97-130)||(30561751-30561784)
chr1 (60-128)||(45481486-45481552)
chr1 (97-130)||(46335059-46335092)
chr1 (68-116)||(49875613-49875659)
chr1 (97-129)||(13054901-13054933)
chr1 (68-147)||(17034780-17034857)
chr1 (77-140)||(29798106-29798167)
chr1 (68-127)||(34808566-34808623)
chr1 (97-129)||(41362647-41362679)
chr1 (77-128)||(42416813-42416862)
[»] chr6 (29 HSPs)
chr6 (68-146)||(404164-404240)
chr6 (97-147)||(12808897-12808947)
chr6 (97-147)||(35110082-35110132)
chr6 (75-144)||(10278461-10278528)
chr6 (78-138)||(28046170-28046228)
chr6 (70-130)||(31971532-31971590)
chr6 (68-138)||(17829300-17829368)
chr6 (75-147)||(6610085-6610153)
chr6 (97-139)||(21865425-21865467)
chr6 (97-127)||(30639429-30639459)
chr6 (75-131)||(2726416-2726470)
chr6 (80-137)||(3024575-3024632)
chr6 (65-113)||(6864150-6864196)
chr6 (68-124)||(14049890-14049944)
chr6 (68-128)||(15291692-15291750)
chr6 (68-116)||(18256884-18256930)
chr6 (77-129)||(33824891-33824941)
chr6 (77-124)||(334150-334195)
chr6 (61-132)||(3808116-3808185)
chr6 (68-127)||(4450263-4450320)
chr6 (60-130)||(7273043-7273112)
chr6 (61-132)||(8381192-8381261)
chr6 (77-147)||(12232164-12232233)
chr6 (68-131)||(15187064-15187125)
chr6 (68-131)||(15473481-15473542)
chr6 (68-131)||(20744139-20744200)
chr6 (68-115)||(28757039-28757084)
chr6 (97-145)||(28758275-28758323)
chr6 (68-131)||(29069484-29069545)
[»] scaffold0334 (1 HSPs)
scaffold0334 (97-139)||(5210-5252)
[»] scaffold0262 (1 HSPs)
scaffold0262 (68-132)||(15928-15990)
[»] scaffold0426 (1 HSPs)
scaffold0426 (68-147)||(5823-5900)
[»] scaffold0026 (1 HSPs)
scaffold0026 (68-127)||(75326-75383)
[»] scaffold1694 (1 HSPs)
scaffold1694 (77-129)||(165-215)
[»] scaffold0481 (1 HSPs)
scaffold0481 (102-147)||(4579-4624)
[»] scaffold0126 (1 HSPs)
scaffold0126 (68-116)||(34902-34948)
[»] scaffold0016 (1 HSPs)
scaffold0016 (76-124)||(99046-99092)
[»] scaffold1327 (1 HSPs)
scaffold1327 (68-147)||(557-634)
[»] scaffold0896 (1 HSPs)
scaffold0896 (99-147)||(3171-3218)
[»] scaffold0088 (1 HSPs)
scaffold0088 (75-138)||(48029-48090)


Alignment Details
Target: chr5 (Bit Score: 169; Significance: 1e-90; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 35807863 - 35807632
Alignment:
Q  1 ataaaatttattctttattcatcaagtaatagtatatttagactagtccctgtccaaatcgtccccatgagctaaactcagttgataaggacaatgtgca 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |       |||||||| |||| ||||||||||    
T  35807863 ataaagtttattctttattcatcaagtaatagtatatttagactagtccctgtccaaatcgtccccaag-------ctcagttggtaagaacaatgtgca 35807771  T
Q  101 taatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa-gtccctatccaaatcaaaatgaatcataggtttccaattatttagactagac 199  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  35807770 taatatatgcaaggtttgaggttcgaaccccgaacaccaataaaaaaagtccctatccaaatcaaaatgacccataggtttccaattatttagactagac 35807671  T
Q  200 cttatgaattcagatgaaccaattttgatatagacaata 238  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35807670 cttatgaattcagatgaaccaattttgatatagacaata 35807632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 40445991 - 40446038
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  40445991 aactcagttgataaggacaatg--cataatatatgcaaggtctgaggttc 40446038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 22498943 - 22499003
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||||||||| |||||||||||  |||||||||||||||||||| ||||||||||||    
T  22498943 tgagcttaactcagttggtaaggacaatg--cataatatatgcaaggtctg-ggttcgaacccc 22499003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 42168996 - 42168931
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaa 144  Q
    |||||||| |||||||||||  |||| ||||||||||||||| ||||||||||||| |||||| ||||    
T  42168996 ctcagttggtaaggacaatg--catagtatatgcaaggtctggggttcgaaccccagacaccaccaaa 42168931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 781864 - 781924
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||| ||||||||||||| |||||||||  |||| |||||||||||||| |||||||||||    
T  781864 tgagcttaactcagttgatagggacaatgt--ataaaatatgcaaggtctggggttcgaaccc 781924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 8545049 - 8545003
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtc 116  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  8545049 tgagcttaactcagttgataaggacaa--tgcataatatatgcaaggtc 8545003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 23118111 - 23118053
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    |||||| ||||||||||||||||||||  ||||||||||||| ||||| || |||||||||    
T  23118111 tgagcttaactcagttgataaggacaa--tgcataatatatgtaaggtttggggttcgaac 23118053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 3222761 - 3222793
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||||||||||||||||||    
T  3222761 cataatatatgcaaggtctgaggttcgaacccc 3222793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 3671219 - 3671280
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||||||   ||||||||||||    
T  3671219 tgagcttaactcagttgataaggataatgt--ataatatatgcaaggtccagggttcgaacccc 3671280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 7630245 - 7630160
Alignment:
Q  59 tcgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaa 146  Q
    |||||||| |||||| ||||||| || ||| |||||||  |||||||||||||| ||||  |||||||| | |||||||||| |||||    
T  7630245 tcgtccccgtgagcttaactcagatgctaaagacaatg--cataatatatgcaatgtctatggttcgaatctcaaacaccaaaaaaaa 7630160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 8639389 - 8639344
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggt 115  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||||    
T  8639389 tgagcttaactcagttgataaggacaatgtg--taatatatgcaaggt 8639344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 147
Target Start/End: Original strand, 15889400 - 15889489
Alignment:
Q  56 aaatcgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||| | |||||| | |||||||| || ||||||||  |||||||||||||||||||  ||||| |||||| | ||||| |||||||    
T  15889400 aaatcgtcctcgtgagcttagctcagttggtagggacaatg--cataatatatgcaaggtctagggttcaaaccccgaccaccaccaaaaaa 15889489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 17145412 - 17145351
Alignment:
Q  64 cccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    ||||| |||| |||||||||| ||| ||||||||  |||||||||||||| |||||||||||||    
T  17145412 cccataagcttaactcagttggtaaagacaatgt--ataatatatgcaagatctgaggttcgaa 17145351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 31708179 - 31708127
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaagt 149  Q
    |||||||||||||||||||||| |||||||||| |  |||||| |||||||||    
T  31708179 tgcataatatatgcaaggtctggggttcgaacctcggacaccaccaaaaaagt 31708127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 18147615 - 18147571
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaagg 114  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||    
T  18147615 tgagcttaactcagttgataaggacaatgt--ataatatatgcaagg 18147571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 790198 - 790129
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||  ||||||||  | |||||||||||||||  ||||||||||||| ||||||| |||||||    
T  790198 ctcagttgatatagacaatgtata-aatatatgcaaggtcgcaggttcgaaccccgaacaccaccaaaaaa 790129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 1642362 - 1642412
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||||||| ||||  |||||||||||| ||||||| ||||||    
T  1642362 tgcataatatatgcaagatctggagttcgaaccccagacaccaaaaaaaaa 1642412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 5107278 - 5107244
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||||| ||||||||||||||    
T  5107278 tgcataatatatgcaaggtccgaggttcgaacccc 5107244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 8882466 - 8882399
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||| |||||| |||||||||||||| ||||  |||||||||||||| |||||| | ||||| |||||    
T  8882466 gtccccgtgagcttaactcagttgataatgaca--gtgcataatatatgtaaggtccggggttcaaaccc 8882399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 127
Target Start/End: Original strand, 11017204 - 11017234
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||||||||||||||||||||||||||||    
T  11017204 tgcataatatatgcaaggtctgaggttcgaa 11017234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 16071440 - 16071394
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaa 145  Q
    |||||||| ||||||||||| ||||||||||||| |||||| |||||    
T  16071440 cataatatgtgcaaggtctggggttcgaaccccatacaccaccaaaa 16071394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 17144472 - 17144539
Alignment:
Q  60 cgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    ||||||| ||| || ||||||| || |||| ||||||  |||||||||||||||||||||| ||||||||    
T  17144472 cgtccccgtgaacttaactcagctgttaagaacaatg--cataatatatgcaaggtctgagattcgaacc 17144539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 18391601 - 18391660
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||| | |||||||| |||||||||||  ||||| |||||||||||| ||||||||||||    
T  18391601 tgagcttagctcagttggtaaggacaatg--cataaaatatgcaaggtccgaggttcgaacc 18391660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 2475386 - 2475341
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||  |||||||||||||| |||||| |||||||    
T  2475386 aatatatgcaaggtcccaggttcgaaccccagacaccaccaaaaaa 2475341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 4374969 - 4374924
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||||||  ||||||||||||| |||||| |||||||    
T  4374969 aatatatgcaaggtctcgggttcgaaccccagacaccaccaaaaaa 4374924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 5589579 - 5589534
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||  |||||||||||||| |||||| |||||||    
T  5589579 aatatatgcaaggtcccaggttcgaaccccagacaccaccaaaaaa 5589534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 6928472 - 6928427
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||  |||||||||||||| |||||| |||||||    
T  6928472 aatatatgcaaggtcccaggttcgaaccccagacaccaccaaaaaa 6928427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 11647205 - 11647255
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||||||| |||||||||||  ||||||||||||||||| || ||||||||    
T  11647205 aactcagttggtaaggacaatg--cataatatatgcaaggtttggggttcgaa 11647255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 25607106 - 25607060
Alignment:
Q  80 agttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    ||||||||| |||||||  |||||||||||||||||||| |||||||||    
T  25607106 agttgataaagacaatg--cataatatatgcaaggtctggggttcgaac 25607060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 39914902 - 39914971
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaa 140  Q
    |||||| |||||| ||| |||||||||||  |||||||||||||||||| | |||||||||||| | ||||||    
T  39914902 tgagcttaactcaattggtaaggacaatg--cataatatatgcaaggtccg-ggttcgaaccccgaccaccaa 39914971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 2705567 - 2705518
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    ||||||||||||| |||||   ||||||||||| ||||||||||||||||||    
T  2705567 ctcagttgataagaacaata--cataatatatgtaaggtctgaggttcgaac 2705518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 6489008 - 6489069
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| | |||||||| || ||||||||  |||||||||||||||||||| ||||| ||||||    
T  6489008 tgagcttagctcagttggtagggacaatg--cataatatatgcaaggtctggggttcaaacccc 6489069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 16133125 - 16133072
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggtt 123  Q
    |||||| | |||||||| |||||||||||  |||||||||||||||||| ||||||    
T  16133125 tgagcttagctcagttggtaaggacaatg--cataatatatgcaaggtcagaggtt 16133072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 17465428 - 17465396
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||||||||||||||||||| ||||||||||    
T  17465428 tgcataatatatgcaaggtctggggttcgaacc 17465396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 25604060 - 25603983
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| | ||||||||||| |||||  ||||||||||||||||||||  | |||||||| |||   |||||||||||||    
T  25604060 tgagcttagctcagttgatatggaca--gtgcataatatatgcaaggttcggggttcgaatcccggccaccaacaaaaaa 25603983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 27479684 - 27479631
Alignment:
Q  75 aactcagttgataaggacaatgtgcataata-tatgcaaggtctgaggttcgaacc 129  Q
    ||||||||||||||| |||||||  |||||| ||||||||||||| ||||||||||    
T  27479684 aactcagttgataagtacaatgt--ataataatatgcaaggtctggggttcgaacc 27479631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 32200507 - 32200430
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| | ||||||||| | ||||||||  |||||||||||||||||| | ||||| | |||| | |||||||||||||    
T  32200507 tgagcttagctcagttgacagggacaatg--cataatatatgcaaggtccggggttcaagccccgaccaccaacaaaaaa 32200430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 34702491 - 34702548
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| |||||||||| |||||||||  ||||||||||||| |||||| | ||||||||    
T  34702491 tgagcttaactcagttggtaaggacaa--tgcataatatatgaaaggtccggggttcgaa 34702548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 35109401 - 35109458
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| |||||||||| ||| ||||||   |||||||||||||||||| ||||||||||    
T  35109401 tgagcttaactcagttggtaaagacaata--cataatatatgcaaggtccgaggttcgaa 35109458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 43108570 - 43108615
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggt 115  Q
    |||||| |||||||||| |||||||||  |||||||||||||||||||    
T  43108570 tgagcttaactcagttggtaaggacaa--tgcataatatatgcaaggt 43108615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 21914138 - 21914054
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||| |||||||||| |||||||||||  ||||||||||||||||| || |||||||||||| ||||| || ||||||    
T  21914138 gtccccatgagcttaactcagttggtaaggacaatg--cataatatatgcaaggtatggggttcgaacccctaacacaaaaaaaaaa 21914054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 45096020 - 45096096
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||||| || | ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||| ||||||    
T  45096020 gtccccatgaacttagctcagttgataaggacaatg--cataatatatgcaaggtctgtggttcgaaccccagacacca 45096096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 25505768 - 25505701
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    ||||||||||||| |||||||||  |||||||||||  |||||||||||||||||||| |||||||||||    
T  25505768 gtccccatgagcttaactcagtttgtaaggacaatg--cataatatatgcaaggtctggggttcgaaccc 25505701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 30200827 - 30200904
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| | |||||||| |||||||||||  ||||||||||||||||| |||||||||||||||  ||||||| ||||||    
T  30200827 tgagcttagctcagttgctaaggacaatg--cataatatatgcaaggtttgaggttcgaaccccggacaccaaaaaaaaa 30200904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 35191868 - 35191800
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||| |||||||||||  |||||||||||||||||||| ||||||||||||| |||||  |||||||    
T  35191868 ctcagttggtaaggacaatg--cataatatatgcaaggtctggggttcgaaccccagacaccgccaaaaaa 35191800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 17588356 - 17588426
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaa 133  Q
    |||||| |||||| |||||||||| |||||||||||  ||||||||||||||| |||| |||||||| |||||    
T  17588356 gtccccgtgagcttaactcagttggtaaggacaatg--cataatatatgcaagatctggggttcgaatcccaa 17588426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 41990615 - 41990575
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  41990615 cataatatatgcaaggtccgaggttcgaaccccaaacacca 41990575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 53207964 - 53208031
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||| |||||| | |||||||| ||||| |||||  |||||||||||||||||||| |||||||||||    
T  53207964 gtccccgtgagcttagctcagttggtaagggcaatg--cataatatatgcaaggtctggggttcgaaccc 53208031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 1111894 - 1111824
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||| |||||||   |||||||||||||||||||| ||||| |||||| | ||| |||||||||    
T  1111894 aactcagttgatagggacaata--cataatatatgcaaggtctggggttcaaaccccgaccacaaacaaaaaa 1111824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 27397665 - 27397611
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||| || |||||||||  |||||||||||||||||| |||||||||||||    
T  27397665 aactcagttggtatggacaatgt--ataatatatgcaaggtctaaggttcgaacccc 27397611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 39100478 - 39100420
Alignment:
Q  66 catgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcga 126  Q
    |||||||| ||||||||||||||| ||||  |||||||||||| |||||| ||||||||||    
T  39100478 catgagcttaactcagttgataagaacaa--tgcataatatatacaaggtttgaggttcga 39100420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 51250293 - 51250215
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaag 148  Q
    |||||| |||||||||| ||||||||||||  ||||||||||||||| |||| |||| |||||| | |||||  |||||||    
T  51250293 tgagcttaactcagttggtaaggacaatgt--ataatatatgcaaggcctgaagttcaaaccccgatcaccacaaaaaaag 51250215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 13042860 - 13042791
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| | |||||||| ||| |||||| |  ||||||||||||||||| | ||||||||||||||||||||    
T  13042860 tgagcttagctcagttggtaaagacaattt--ataatatatgcaaggtccggggttcgaaccccaaacacca 13042791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 13050937 - 13050868
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| | |||||||| ||| |||||| |  ||||||||||||||||| | ||||||||||||||||||||    
T  13050937 tgagcttagctcagttggtaaagacaattt--ataatatatgcaaggtccggggttcgaaccccaaacacca 13050868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 20400107 - 20400155
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||||||||||||| ||||||| | ||||| ||||||    
T  20400107 cataatatatgcaaggtctgaggttcaaaccccagataccaaaaaaaaa 20400155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 38573633 - 38573556
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| ||||||||||||||| ||||||  |||||||||| ||||||||  | ||||||||||  |||||| |||||||    
T  38573633 tgagcttaactcagttgataagaacaatg--cataatatatacaaggtctaggattcgaaccccggacaccaccaaaaaa 38573556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 1149129 - 1149069
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||| | |||||||| |||||||||||  |||||||||||||||||||  |||||||||||    
T  1149129 tgagcttagctcagttggtaaggacaatg--cataatatatgcaaggtctagggttcgaaccc 1149069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 1456590 - 1456546
Alignment:
Q  78 tcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||||||| |||||||||  |||||||||||||||||||||||||    
T  1456590 tcagttgatagggacaatgt--ataatatatgcaaggtctgaggttc 1456546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 4216450 - 4216383
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||||||||||  |||||||||||||||||| | |||||||||||   |||||| |||||||    
T  4216450 ctcagttgataaggacaatg--cataatatatgcaaggtc-ggggttcgaaccctggacaccaccaaaaaa 4216383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 7101823 - 7101777
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaa 146  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||||    
T  7101823 cataatatatgcaaggtccgag-ttcgaaccccaaacaccaccaaaaa 7101777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 128
Target Start/End: Original strand, 42074131 - 42074162
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaac 128  Q
    ||||||||||||||||||||||||||||||||    
T  42074131 tgcataatatatgcaaggtctgaggttcgaac 42074162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 54230150 - 54230098
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||| |||||||||||  ||||||||||||||||| || ||||||||||||    
T  54230150 ctcagttggtaaggacaatg--cataatatatgcaaggtttggggttcgaacccc 54230098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 55126000 - 55126076
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| |||||| | |||||||||| ||||||||   |||||||||||||||||  ||||||| ||||||| ||||||    
T  55126000 gtccccgtgagcttagctcagttgatgaggacaata--cataatatatgcaaggttcgaggttcaaaccccagacacca 55126076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 5702245 - 5702179
Alignment:
Q  60 cgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    ||||||| |||||| | |||||||| |||| ||||||  ||||||||||||||||| |||||||||||||    
T  5702245 cgtccccgtgagcttagctcagttggtaag-acaatg--cataatatatgcaaggtttgaggttcgaacc 5702179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 8075813 - 8075847
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||||||||||||| ||||||    
T  8075813 tgcataatatatgcaaggtctgaggttcaaacccc 8075847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 127
Target Start/End: Original strand, 8139743 - 8139773
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||||||||||||||||||||||||||||    
T  8139743 tgcataatatatgcaaggtctgaggttcgaa 8139773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 13829110 - 13829076
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||||||| ||||||||||||    
T  13829110 tgcataatatatgcaaggtctggggttcgaacccc 13829076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 127
Target Start/End: Original strand, 14771359 - 14771389
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||||||||||||||||||||||||||||    
T  14771359 tgcataatatatgcaaggtctgaggttcgaa 14771389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 33771682 - 33771737
Alignment:
Q  59 tcgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtc 116  Q
    |||||| | |||||| |||||||||| ||||||||||||  |||||||||||||||||    
T  33771682 tcgtcctcgtgagcttaactcagttggtaaggacaatgt--ataatatatgcaaggtc 33771737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 34899125 - 34899175
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||||||| | ||||| |||||| | |||||||||||||    
T  34899125 tgcataatatatgcaaggtccggggttcaaaccccgaccaccaacaaaaaa 34899175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 39869869 - 39869810
Alignment:
Q  66 catgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| | |||||||||| |||||||||||  |||||||||| ||||||| ||||||||||    
T  39869869 catgagtttaactcagttggtaaggacaatg--cataatatatacaaggtccgaggttcgaa 39869810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 45885510 - 45885476
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||||||||||||| ||||||    
T  45885510 tgcataatatatgcaaggtctgaggttcaaacccc 45885476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 46226058 - 46226008
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||||||| |  ||||||||||| |||||||| ||||||    
T  46226058 tgcataatatatgcaaggtccggagttcgaaccccgaacaccaaaaaaaaa 46226008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 53681944 - 53681877
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||| |||||| | |||||||| |||| ||||||  ||||||||||||||| | ||||||||||||||    
T  53681944 gtccccgtgagcttacctcagttggtaagaacaatg--cataatatatgcaagatttgaggttcgaaccc 53681877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 7829904 - 7829954
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    ||||||||||||| ||||||||  ||||||||||| ||||||||| |||||||    
T  7829904 aactcagttgatatggacaatg--cataatatatgtaaggtctgaagttcgaa 7829954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 12976655 - 12976605
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    ||||||||||||| ||||||||  |||||||||||||||||||| | ||||||    
T  12976655 aactcagttgatagggacaatg--cataatatatgcaaggtctgggattcgaa 12976605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 21513289 - 21513351
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    |||||| | |||||||| |||||||||||  |||||| ||||||||||||| |||||||| ||||    
T  21513289 tgagcttagctcagttggtaaggacaatg--cataatttatgcaaggtctggggttcgaatccca 21513351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 22462306 - 22462352
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatg 109  Q
    |||||| |||||| ||||||||||||||||||||  |||||||||||||    
T  22462306 gtccccgtgagcttaactcagttgataaggacaa--tgcataatatatg 22462352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 30269196 - 30269151
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||||||  ||||||||||||| |||||| |||||||    
T  30269196 aatatatgcaaggtctcgggttcgaaccccagacaccaccaaaaaa 30269151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 41990877 - 41990832
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||  |||||||||||||  ||||||||||||||    
T  41990877 aatatatgcaaggtcgcaggttcgaaccccggacaccaacaaaaaa 41990832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 43796897 - 43796819
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaag 148  Q
    |||||| |||||||||| || |||||||||  |||||| |||||| |||||||||||||| |||  ||||||  |||||||    
T  43796897 tgagcttaactcagttggtatggacaatgt--ataatacatgcaaagtctgaggttcgaatccctgacaccataaaaaaag 43796819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 46253930 - 46253897
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||| |||||||||||||||||||||||||||    
T  46253930 tgcatagtatatgcaaggtctgaggttcgaaccc 46253897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 5117209 - 5117266
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| | |||||||||||||||||||   ||||||||||| ||||| |||||||||||    
T  5117209 tgagcttagctcagttgataaggacaata--cataatatatgtaaggtttgaggttcgaa 5117266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 6835886 - 6835850
Alignment:
Q  95 tgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||||||||  ||||||||||||    
T  6835886 tgtgcataatatatgcaaggtctagggttcgaacccc 6835850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 19468452 - 19468509
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| |||||||||| || ||||||||  |||||||||||||||||| | ||||||||    
T  19468452 tgagcttaactcagttggtatggacaatg--cataatatatgcaaggtccgtggttcgaa 19468509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 23148038 - 23147969
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| | |||||||| ||||||||||   |||||||||||| ||||| | |||||||||||| |||||||    
T  23148038 tgagcttagctcagttggtaaggacaata--cataatatatgcgaggtccggggttcgaaccccgaacacca 23147969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 24273653 - 24273685
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||||||||||||||||||||||| |||||||    
T  24273653 cataatatatgcaaggtctgaggtttgaacccc 24273685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 33745093 - 33745162
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    |||||| |||||| | |||| |||||| ||||||||  ||||| |||||||||||||| ||||| |||||||    
T  33745093 gtccccgtgagcttagctcaattgatatggacaatg--cataaaatatgcaaggtctggggttcaaacccca 33745162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 38131019 - 38130958
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||||||||| || ||||||||  |||||||||||||||||| | ||||| ||||||    
T  38131019 tgagcttaactcagttggtatggacaatg--cataatatatgcaaggtccggggttcaaacccc 38130958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 49975864 - 49975811
Alignment:
Q  69 gagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    ||||| |||||||||| || ||||||||  |||||||||||||||||||| |||||    
T  49975864 gagcttaactcagttgttatggacaatg--cataatatatgcaaggtctggggttc 49975811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 52119377 - 52119438
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| | |||||||| |||||||||||  |||||||||||||||||  | ||||||||||||    
T  52119377 tgagcttagctcagttggtaaggacaatg--cataatatatgcaaggttcggggttcgaacccc 52119438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 53996300 - 53996357
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| | |||||||| || ||||||||  |||||||||||||||||||| ||||||||    
T  53996300 tgagcttagctcagttggtatggacaatg--cataatatatgcaaggtctggggttcgaa 53996357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 6384852 - 6384929
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| ||||||||| ||||||||||||  |||||||||||||||||||| ||||||||||| | |||||| |||||||    
T  6384852 tgagcttaactcagttaataaggacaatg--cataatatatgcaaggtctggggttcgaaccctagacaccaccaaaaaa 6384929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 40187703 - 40187619
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||| |||||||| |||||||||| || ||||||||  ||||||||||| |||||||| ||||| |||||| ||||||| |||||||    
T  40187703 gtcctcatgagcttaactcagttggtagggacaatg--cataatatatgtaaggtctgcggttcaaaccccgaacaccaccaaaaaa 40187619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 20103514 - 20103436
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaag 148  Q
    |||||| |||||||||| |||||||||||  |||||||| | ||||||| | ||||||||||||| |||||| ||||||||    
T  20103514 tgagcttaactcagttggtaaggacaatg--cataatatttacaaggtccggggttcgaaccccagacaccaccaaaaaag 20103436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 31533446 - 31533393
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    ||||||||||||||||||| | ||||||||||||||||| || |||||||||||    
T  31533446 ctcagttgataaggacaatatacataatatatgcaaggtttggggttcgaaccc 31533393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 38911293 - 38911358
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    |||||| |||||| |||||||||||||| ||||||||  |||||||||||||||| ||| ||||||||    
T  38911293 gtccccgtgagcttaactcagttgataaagacaatgt--ataatatatgcaaggtttgaagttcgaac 38911358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 41250114 - 41250038
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    ||||||||||| | | ||||||||||||| |||||||  ||||||||||||||||| ||||||| | |||| |||||||    
T  41250114 gtccccatgagtttagctcagttgataagaacaatgt--ataatatatgcaaggtccgaggttcaagccccgaacacca 41250038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 7872799 - 7872748
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||||| |||||||||||  |||||||||||||||||||| |||||||||||    
T  7872799 ctcagttggtaaggacaatg--cataatatatgcaaggtctggggttcgaaccc 7872748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 19793532 - 19793591
Alignment:
Q  78 tcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||  |||||||||||  |||||||||| |||||||| ||||||||||||||||||||    
T  19793532 tcagttggaaaggacaatgt--ataatatatgtaaggtctggggttcgaaccccaaacacca 19793591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 31723457 - 31723398
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaaca 136  Q
    ||||||||||||||| ||||| |  |||||||||||||| ||||||||||||| ||||||||    
T  31723457 aactcagttgataagaacaatat--ataatatatgcaagatctgaggttcgaaacccaaaca 31723398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 37235312 - 37235391
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaagt 149  Q
    |||||| || |||||||||| ||||||||  ||| ||||||||||||||||| ||| ||||||| | ||||| |||||||||    
T  37235312 tgagcttaattcagttgatatggacaatg--catgatatatgcaaggtctgaagtttgaaccccgaccaccaccaaaaaagt 37235391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 46987087 - 46987165
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaag 148  Q
    |||||| | |||||||| |||||||||||  |||||||||||||||||| | ||||||||||||  |||||| | ||||||    
T  46987087 tgagcttagctcagttggtaaggacaatg--cataatatatgcaaggtccggggttcgaaccccggacaccacccaaaaag 46987165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 35142209 - 35142148
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| | ||||||||||| ||||||||  |||||||||||||| || |||||||||||||||    
T  35142209 tgagcttagctcagttgatatggacaatg--cataatatatgcaaagtttgaggttcgaacccc 35142148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 2618689 - 2618757
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||| |||||||||||  |||||||||||||||||| | |||||||| | || |||||| |||||||    
T  2618689 ctcagttggtaaggacaatg--cataatatatgcaaggtccggggttcgaatctcatacaccaccaaaaaa 2618757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 2916096 - 2916164
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| ||| || |||||||||| || ||||||||  |||||||||||||||||||| | ||||||||||    
T  2916096 gtccccgtgaccttaactcagttggtacggacaatg--cataatatatgcaaggtctgggattcgaacccc 2916164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 6768740 - 6768689
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaag 148  Q
    ||||||||||||||||||||||||||||||| | |  |||||| ||||||||    
T  6768740 tgcataatatatgcaaggtctgaggttcgaatctcggacaccatcaaaaaag 6768689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 10423971 - 10424039
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||| |||||||||| |  ||||||||||  |||||||||||||||||||||   |||||||||||||    
T  10423971 ctcagttcataaggacaacg--cataatatatataaggtctgaggttcgaaccccggccaccaacaaaaaa 10424039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 18714458 - 18714526
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||| |||||||||||  |||||||||||||||||| | ||||| ||||||  |||||| |||||||    
T  18714458 ctcagttggtaaggacaatg--cataatatatgcaaggtccggggttcaaaccccgtacaccaccaaaaaa 18714526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 132
Target Start/End: Original strand, 25923419 - 25923454
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    ||||||||||||||||||||||||||| ||||||||    
T  25923419 tgcataatatatgcaaggtctgaggtttgaacccca 25923454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 35165541 - 35165593
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||||||||||| ||||||   ||||||||||| |||||||||||||||||||    
T  35165541 aactcagttgataacgacaata--cataatatatgtaaggtctgaggttcgaacc 35165593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 20085792 - 20085750
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||||||||||||||| | ||||| ||||||||||||||    
T  20085792 tgcataatatatgcaaggtccggggttcaaaccccaaacacca 20085750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 21050282 - 21050223
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||| | |||||||| |||||||||||  |||||||||||||||||||| | ||||||||    
T  21050282 tgagcttagctcagttggtaaggacaatg--cataatatatgcaaggtctgggtttcgaacc 21050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 1399170 - 1399232
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||||| || ||||||||  ||| |||||||||||||||||| ||||||||| || |||||    
T  1399170 aactcagttggtatggacaatg--catgatatatgcaaggtctgagattcgaaccctaaccacca 1399232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 10236958 - 10236888
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||| |||| ||||||  |||||| ||||||||||  ||||||||||||||  |||||| |||||||    
T  10236958 aactcagttggtaagaacaatg--cataatgtatgcaaggttcgaggttcgaaccccggacaccaccaaaaaa 10236888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 23639527 - 23639482
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||||||  ||||||||||||| |||||| |||||||    
T  23639527 aatatatgcaaggtctcgggttcgaaccccagacaccaccaaaaaa 23639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 30296334 - 30296388
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||| | |||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  30296334 tgagcttagctcagttggtaaggacaatgt--ataatatatgcaaggtctggggttc 30296388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 37230088 - 37230034
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||| |||||||||| |||||| ||||  |||||||||||||||||||| |||||    
T  37230088 tgagcttaactcagttggtaaggaaaatg--cataatatatgcaaggtctggggttc 37230034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 37669381 - 37669336
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||   |||||||||||||||||||| |||||||    
T  37669381 aatatatgcaaggtcctgggttcgaaccccaaacaccaccaaaaaa 37669336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 43156153 - 43156198
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||   |||||||||||||||||||| |||||||    
T  43156153 aatatatgcaaggtcccgggttcgaaccccaaacaccaccaaaaaa 43156198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 48527191 - 48527237
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtc 116  Q
    |||||| | ||||||||||||||||||  ||||||||||||||||||||    
T  48527191 tgagcttatctcagttgataaggacaa--tgcataatatatgcaaggtc 48527237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 3532609 - 3532649
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacac 137  Q
    ||||||||||||||| || | ||||||||||||||||||||    
T  3532609 tgcataatatatgcaggggccgaggttcgaaccccaaacac 3532649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 3533059 - 3532995
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaa 144  Q
    |||||||  |||||||||||  ||||||||||||||||| || ||||||||||||| |||||| ||||    
T  3533059 ctcagttagtaaggacaatg--cataatatatgcaaggtatg-ggttcgaaccccatacaccaccaaa 3532995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 5458131 - 5458062
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| | ||||||||||||| ||||||  |||||||||||||||||||| | ||| |||| | |||||||    
T  5458131 tgagcttagctcagttgataagaacaatg--cataatatatgcaaggtctgggattcaaacctcgaacacca 5458062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 5579694 - 5579755
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| | |||||||| || |||||  ||||||||||||||||||||||| ||||| ||||||    
T  5579694 tgagcttagctcagttggtagggaca--gtgcataatatatgcaaggtctggggttcaaacccc 5579755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 22777410 - 22777373
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtc 116  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  22777410 ctcagttgataaggacaatg--cataatatatgcaaggtc 22777373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 23069888 - 23069840
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||||||| || ||||||||||||  |||||| |||||||    
T  23069888 cataatatatgcaaggtatggggttcgaaccccggacaccaccaaaaaa 23069840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 27544951 - 27545004
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtc 116  Q
    |||||| |||||| | |||||||| ||||||||||||  |||||||||||||||||    
T  27544951 gtccccgtgagcttatctcagttggtaaggacaatgt--ataatatatgcaaggtc 27545004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 39801707 - 39801784
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| | |||||||| || ||||||||  ||||||||||||||| || | ||| |||||||||| ||||| |||||||    
T  39801707 tgagcttagctcagttggtatggacaatg--cataatatatgcaagatccggggtacgaaccccaaccaccaccaaaaaa 39801784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 39926598 - 39926529
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| | ||||||||||||||||||  |||||||||||||||| ||  | ||||| |||| |||||||||    
T  39926598 tgagcttagctcagttgataaggacaa--tgcataatatatgcaatgttcggggttcaaacctcaaacacca 39926529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 41029273 - 41029330
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| | |||||||| ||||||||||||  ||||||||||||||||| | ||||||||    
T  41029273 tgagcttagctcagttggtaaggacaatgt--ataatatatgcaaggtccggggttcgaa 41029330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 48007607 - 48007530
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| |||||||||| ||| |||||||  ||||||||||||||||||||  ||| ||||||   |||||| |||||||    
T  48007607 tgagcttaactcagttggtaatgacaatg--cataatatatgcaaggtctggagtttgaacccaggacaccaccaaaaaa 48007530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 7371608 - 7371531
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| |||||||||||||||||||||   |||||||||||||||||| | ||||||||||||  ||||||||||||||    
T  7371608 tgagcttaactcagttgataaggacaata--cataatatatgcaaggtccggggttcgaaccccggacaccaacaaaaaa 7371531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 46676565 - 46676481
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||| | |||||||| |||||||||||  |||||||||||||||||| | ||||||| ||||| |||||| |||||||    
T  46676565 gtccccatgagcttagctcagttggtaaggacaatg--cataatatatgcaaggtccggggttcgacccccagacaccaccaaaaaa 46676481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 17216189 - 17216120
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||| ||||||||||||| | ||||  ||||||||||||||||||||| |||||||||||| ||||||    
T  17216189 tgagctaagctcagttgataagaataatg--cataatatatgcaaggtctgaagttcgaaccccagacacca 17216120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 19908693 - 19908754
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||    
T  19908693 tgagcttaactcagttggtaaggacaatg--cataatatatgcaaggtccgaggttcgaacccc 19908754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 147
Target Start/End: Original strand, 11269688 - 11269772
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| |||||| |||| ||||| ||||||||||   |||||||||||||||||||  ||||||||||||| |||||| |||||||    
T  11269688 gtccccgtgagcttaacttagttggtaaggacaata--cataatatatgcaaggtcttgggttcgaaccccagacaccaccaaaaaa 11269772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 147
Target Start/End: Original strand, 18635524 - 18635608
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| |||||| ||||||||||||||||||||  |||||||||||| ||||||||| |||| ||| |||| |||||  |||||||    
T  18635524 gtccccgtgagcttaactcagttgataaggacaa--tgcataatatatacaaggtctggggtttgaatcccagacaccgccaaaaaa 18635608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 19124682 - 19124622
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||| |||||||||||||| ||||||   ||||||||||||||||||||||||||||||||    
T  19124682 tgagcttaactcagttgataaagacaata--cataatatatgcaaggtctgaggttcgaaccc 19124622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 24785528 - 24785461
Alignment:
Q  62 tccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||| |||||||| |||||||| |||||||||||  |||||||||| ||||||||| ||||||||||||    
T  24785528 tccccgtgagctaagctcagttggtaaggacaatg--cataatatatacaaggtctggggttcgaacccc 24785461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 24822738 - 24822805
Alignment:
Q  62 tccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||| |||||||| |||||||| |||||||||||  |||||||||| ||||||||| ||||||||||||    
T  24822738 tccccgtgagctaagctcagttggtaaggacaatg--cataatatatacaaggtctggggttcgaacccc 24822805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 47806289 - 47806239
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |||||||    
T  47806289 tgcataatatatgcaaggtctggggttcgaaccccgaacaccaccaaaaaa 47806239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 11144734 - 11144648
Alignment:
Q  59 tcgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| ||||| || | |||||||||||| |||||||  |||||||||||||||||||| |||| |||||||  |||||| |||||||    
T  11144734 tcgtcctcatgaacttacctcagttgataaagacaatg--cataatatatgcaaggtctggggtttgaaccccggacaccaccaaaaaa 11144648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 38416058 - 38416127
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| | |||||||| |||||| ||||  ||||||||||||||||| ||||||||||| |||||||||||    
T  38416058 tgagcttagctcagttggtaaggataatg--cataatatatgcaaggtatgaggttcgaatcccaaacacca 38416127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 43034402 - 43034341
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||||||||| || ||||||||  |||||||||||||||||||||||||| ||||||    
T  43034402 tgagcttaactcagttggtatggacaatg--cataatatatgcaaggtctgaggttcaaacccc 43034341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 1701619 - 1701685
Alignment:
Q  78 tcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaa 145  Q
    |||||||||||||| ||  |||||||||||||||||||| |||||||||||| || |||||| |||||    
T  1701619 tcagttgataaggataaa-tgcataatatatgcaaggtccgaggttcgaacctcagacaccaccaaaa 1701685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 25978312 - 25978387
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| |||||| | |||||||| |||||||||||  |||||||||||||||||| |||||||||| |||| ||||||    
T  25978312 gtccccgtgagcttagctcagttg-taaggacaatg--cataatatatgcaaggtccgaggttcgaatcccagacacca 25978387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 44221448 - 44221508
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||| || ||||||| || ||||||||  ||||||||||||||||||||||||||||||||    
T  44221448 tgagcttaattcagttggtatggacaatg--cataatatatgcaaggtctgaggttcgaaccc 44221508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 37800859 - 37800909
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||| ||||||| |||||||||||| | |||||||||||||    
T  37800859 tgcataatatatgcgaggtctggggttcgaaccccgatcaccaacaaaaaa 37800909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 49308830 - 49308881
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    ||||||||| ||||||||||  |||||||||||||||||||| |||||||||||    
T  49308830 ctcagttgacaaggacaatg--cataatatatgcaaggtctggggttcgaaccc 49308881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 22630393 - 22630344
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaa 146  Q
    |||||||||||||||||||||||||||| |||||| | ||||| ||||||    
T  22630393 tgcataatatatgcaaggtctgaggttcaaaccccgaccaccatcaaaaa 22630344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 11166699 - 11166748
Alignment:
Q  80 agttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||| ||||||||||||  |||||||||||||||||| |||||||||||||    
T  11166699 agttggtaaggacaatgt--ataatatatgcaaggtctaaggttcgaacccc 11166748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 14542793 - 14542745
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaa 145  Q
    |||||||||||||||||||||| |||||||||||  ||||||| |||||    
T  14542793 tgcataatatatgcaaggtctggggttcgaaccctgaacaccaccaaaa 14542745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 29808318 - 29808269
Alignment:
Q  78 tcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||||||||||||||||  ||||||||||||||||| || ||||||||||    
T  29808318 tcagttgataaggacaatg--cataatatatgcaaggtatggggttcgaacc 29808269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 29910455 - 29910516
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||| |||||| |||||| |||||||||||||  ||||||||||||||||| ||||| ||||    
T  29910455 gtccccgtgagcttaactcaattgataaggacaa--tgcataatatatgcaagatctgaagttc 29910516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 42316884 - 42316827
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| |||||||||| ||| ||||  ||||||||||||||||||||| ||||||||||    
T  42316884 tgagcttaactcagttggtaaagaca--gtgcataatatatgcaaggtccgaggttcgaa 42316827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 3299127 - 3299088
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaaca 136  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  3299127 tgcataatatatgcaaggtttgaggttcaaaccccaaaca 3299088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 6474433 - 6474501
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||||| | ||||||||| ||||||||||  ||| ||||| |||||||||| ||||||||||||    
T  6474433 gtccccgtgagcttagctcagttgacaaggacaatg--catcatataagcaaggtctggggttcgaacccc 6474501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 20403229 - 20403169
Alignment:
Q  67 atgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    ||||||| | ||||||||||| | ||||||  ||||||||||||||||||||| |||||||||    
T  20403229 atgagcttagctcagttgataggaacaatg--cataatatatgcaaggtctgaagttcgaacc 20403169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 35378247 - 35378187
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||| |||||| |||||||||||||||||  ||||||||||||||| |||| | |||||||    
T  35378247 tgagcttaactcaattgataaggacaatgtg--taatatatgcaaggtatgagatccgaaccc 35378187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 56497675 - 56497611
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| |||||| | |||| ||| |||||||||||  |||||||||||||||||||| ||||||||    
T  56497675 gtccccgtgagcttagctcaattggtaaggacaatg--cataatatatgcaaggtctggggttcgaa 56497611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 56551643 - 56551591
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||| |||||||||||  |||||||||||||||||| ||||||| ||||||    
T  56551643 ctcagttggtaaggacaatg--cataatatatgcaaggtccgaggttcaaacccc 56551591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 3580742 - 3580792
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||||||||| | ||||||||||  |||||| |||||||    
T  3580742 tgcataatatatgcaaggtctgggattcgaaccccggacaccaccaaaaaa 3580792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 4911660 - 4911607
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||| ||||||||||||||||| |   ||||||||||||| ||||||||||||||    
T  4911660 tgagcttaactcagttgataaggata---tgcataatatatgtaaggtctgaggttc 4911607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 22164302 - 22164252
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||| |||||||| ||||| |||||| | |||||||||||||    
T  22164302 tgcataatatatgtaaggtctggggttcaaaccccgaccaccaacaaaaaa 22164252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 26004647 - 26004701
Alignment:
Q  82 ttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    ||||||||||||  |||||||||||||||||||| |||| ||||||| ||||||||||    
T  26004647 ttgataaggaca--gtgcataatatatgcaaggt-tgagattcgaactccaaacacca 26004701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 29568614 - 29568656
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||    
T  29568614 tgcataatatatgtaaggtccgaggttcgaaccccagacacca 29568656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 33758837 - 33758787
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||||||||||||||  || ||||| ||||| |||||||    
T  33758837 tgcataatatatgcaaggtctgaggtttaaatcccaaccaccaccaaaaaa 33758787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 37930880 - 37930846
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||||||||||||| ||||||    
T  37930880 tgcataatatatgcaaggtctgaggttcaaacccc 37930846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 39842065 - 39842018
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    ||||||||||||||||||||  ||||||||||||| ||||| ||||||||    
T  39842065 aactcagttgataaggacaa--tgcataatatatgtaaggtttgaggttc 39842018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 47018309 - 47018358
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||||||||||  ||||||||||||||||||| || ||||||    
T  47018309 tgcataatatatgcaaggtcc-aggttcgaaccccaaacacaaaaaaaaaa 47018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 49473657 - 49473708
Alignment:
Q  79 cagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    |||||| |||||||||||  |||||||||||||||||| | |||||||||||||    
T  49473657 cagttggtaaggacaatg--cataatatatgcaaggtccggggttcgaacccca 49473708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 49716972 - 49716922
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||||||||| |||||||| ||||||  ||||||| ||||||    
T  49716972 tgcataatatatgcaaggtttgaggttctaaccccggacaccaaaaaaaaa 49716922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 50442780 - 50442731
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||||||||| |||||||| |||| |||||| |||||||    
T  50442780 tgcataatatatgcaaggtctg-ggttcgaatcccagacaccaccaaaaaa 50442731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 52132335 - 52132301
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||||||| ||||||||||||    
T  52132335 tgcataatatatgcaaggtctgtggttcgaacccc 52132301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 1166600 - 1166645
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||  |||||||||||||| |||||| |||||||    
T  1166600 aatatatgcaaggtcccaggttcgaaccccagacaccaccaaaaaa 1166645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 1169082 - 1169127
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||  |||||||||||||| |||||| |||||||    
T  1169082 aatatatgcaaggtcccaggttcgaaccccagacaccaccaaaaaa 1169127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 16612650 - 16612698
Alignment:
Q  78 tcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||||||||||||||  |||| ||||||||||||||| ||||||||||    
T  16612650 tcagttgataaggacaaa-tgcagaatatatgcaaggtccgaggttcgaa 16612698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 29908057 - 29908103
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtc 116  Q
    |||||| |||||||||| |||||||||  ||||||||||||||||||||    
T  29908057 tgagcttaactcagttggtaaggacaa--tgcataatatatgcaaggtc 29908103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 30380538 - 30380588
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||||||| ||||||||||||  |||||||||||||||| || ||||||||    
T  30380538 aactcagttggtaaggacaatgt--ataatatatgcaaggtttggggttcgaa 30380588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 36203237 - 36203283
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtc 116  Q
    |||||| | ||||||||||||||||||  ||||||||||||||||||||    
T  36203237 tgagcttagctcagttgataaggacaa--tgcataatatatgcaaggtc 36203283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 43183044 - 43182994
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||||||||| |||||||  ||||||||||||||||||| ||||| |||||    
T  43183044 ctcagttgataaagacaatg--cataatatatgcaaggtctaaggtttgaacc 43182994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 9990294 - 9990326
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacc 129  Q
    ||||||||||||||||| |||||||||||||||    
T  9990294 tgcataatatatgcaagatctgaggttcgaacc 9990326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 12263262 - 12263307
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    ||||||||| |||||||||||  |||||||||| ||||||||||||||    
T  12263262 ctcagttgacaaggacaatgt--ataatatatgtaaggtctgaggttc 12263307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 12698598 - 12698655
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| | ||||||||||  ||||||||  |||||||||||||||||||| ||||||||    
T  12698598 tgagcttagctcagttgatttggacaatg--cataatatatgcaaggtctggggttcgaa 12698655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 41222113 - 41222073
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||| ||||||||||||| ||||||||||||||| ||||||    
T  41222113 catagtatatgcaaggtccgaggttcgaaccccagacacca 41222073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 46434811 - 46434766
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    ||||||||||||||||||||  ||||||||||| ||||| ||||||||    
T  46434811 ctcagttgataaggacaatg--cataatatatgtaaggtttgaggttc 46434766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 56096207 - 56096272
Alignment:
Q  70 agctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacac 137  Q
    |||| ||||||||||||||||||||  ||||||||||||| |||||  | ||||| ||| ||||||||    
T  56096207 agcttaactcagttgataaggacaa--tgcataatatatgtaaggttcgtggttcaaactccaaacac 56096272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 56565043 - 56564974
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| | |||| |||||| ||||||||  ||||| |||||||||||||  |||||||||||| |||||||    
T  56565043 tgagcttagctcaattgatatggacaatg--cataaaatatgcaaggtctagggttcgaaccccgaacacca 56564974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 24393239 - 24393307
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||||| | |||||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  24393239 gtccccgtgagcttagctcagttgttaaggacaatg--cataatatatgcaaggtctgaggttcgaacccc 24393307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 34903511 - 34903579
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||||||||||| |  ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  34903511 gtccccatgagcttagttcagttggtaaggaca--gtgcataatatatgcaaggtctgaggttcgaacccc 34903579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 40967431 - 40967372
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||| |||||||| ||||    
T  40967431 tgagcttaactcagttgataaggacaatg--cataatatatgcaaggtttgaggttcaaacc 40967372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 2256972 - 2257033
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||||||||| || ||||||||  |||||||||||||||||||| ||||||||||||    
T  2256972 tgagcttaactcagttggtatggacaatg--cataatatatgcaaggtctggggttcgaacccc 2257033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 16204877 - 16204824
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggtt 123  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  16204877 tgagcttaactcagttgataaggacaa--tgcataatatatgcaaggtctggggtt 16204824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 24593377 - 24593454
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| | |||||||| |||||||||||  |||||||||||||||||| | |||||||||||  ||||||| |||||||    
T  24593377 tgagcttagctcagttggtaaggacaatg--cataatatatgcaaggtccggggttcgaaccctgaacaccaccaaaaaa 24593454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 43117241 - 43117188
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||    
T  43117241 ctcagttggtaaggacaatg--cataatatatgcaaggtctgaggttcaaacccca 43117188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 7640652 - 7640728
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| |||||| |||||| ||| ||||||||||   ||||||||||| |||| ||||||||||||||||| ||||||    
T  7640652 gtccccgtgagcttaactcaattggtaaggacaata--cataatatatgtaaggcctgaggttcgaaccccagacacca 7640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 12124555 - 12124615
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||| |||||||||||  |||||||||||||||||| | |||||||||| |||||||||    
T  12124555 ctcagttggtaaggacaatg--cataatatatgcaaggtccggggttcgaacctcaaacacca 12124615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 12413507 - 12413555
Alignment:
Q  81 gttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  12413507 gttgataaggacaatg--cataatatatgcaaggtctgaggttcaaacccc 12413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 12425567 - 12425615
Alignment:
Q  81 gttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  12425567 gttgataaggacaatg--cataatatatgcaaggtctgaggttcaaacccc 12425615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 19179117 - 19179033
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| |||||| | |||||||| |||||||||||  |||||||||||||||||||| | |||||| ||| ||||| | |||||||    
T  19179117 gtccccgtgagcttagctcagttggtaaggacaatg--cataatatatgcaaggtctgcgcttcgaatcccgaacactaccaaaaaa 19179033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 28163937 - 28163997
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    ||||||||||||||||||||  ||||||| ||||| ||||||||||||||| |||| ||||||    
T  28163937 ctcagttgataaggacaatg--cataatacatgcacggtctgaggttcgaatcccagacacca 28163997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 40099450 - 40099387
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    ||||||||||||| | |||||||| |||||||||  |||||||||||||||||||| ||||||||||    
T  40099450 gtccccatgagcttagctcagttggtaaggacaa--tgcataatatatgcaaggtc-gaggttcgaa 40099387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 9982633 - 9982701
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||||||||||  ||||||||||||| |||||| | ||||||||||||||| ||||| ||||||    
T  9982633 aactcagttgataaggacaa--tgcataatatatg-aaggtccg-ggttcgaaccccaaataccaaaaaaaaa 9982701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 35727430 - 35727496
Alignment:
Q  60 cgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    ||||||| |||||| |||||||||| |||| ||||||  ||||||||||||||||| || |||||||||    
T  35727430 cgtccccgtgagcttaactcagttggtaagaacaatg--cataatatatgcaaggtttggggttcgaac 35727496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 43356575 - 43356526
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaa 146  Q
    |||||||||||||||||||| ||||||||||||| |||||| || |||||    
T  43356575 tgcataatatatgcaaggtccgaggttcgaaccctaaacacaaaaaaaaa 43356526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 5980237 - 5980286
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    ||||||||||||||||||||  ||||||||||||||||||| | ||||||||    
T  5980237 ctcagttgataaggacaatg--cataatatatgcaaggtctaaagttcgaac 5980286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 9389476 - 9389533
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaa 134  Q
    |||||| |||||||||| |||||  |||||||||||||||||||  ||||||||||||||    
T  9389476 aactcaattgataaggataatgt--ataatatatgcaaggtctggagttcgaaccccaaa 9389533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 27152354 - 27152431
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| |||||||||| || ||| ||||  |||||||||||||||||||| |||||||||||   |||||| |||||||    
T  27152354 tgagcttaactcagttggtagggataatg--cataatatatgcaaggtctggggttcgaacccaggacaccaccaaaaaa 27152431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 39068768 - 39068699
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| | ||||||||||||||||||||  ||||||||||||||| || | |||| |||||||| ||||||    
T  39068768 tgagcttagctcagttgataaggacaatg--cataatatatgcaagatccggggtttgaaccccatacacca 39068699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 39761431 - 39761499
Alignment:
Q  60 cgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||||| |||| | | ||||||||||||||||||||  |||||||||||||||||||| |||| |||||||    
T  39761431 cgtccccgtgagtttagctcagttgataaggacaatg--cataatatatgcaaggtctg-ggtttgaacccc 39761499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 12124694 - 12124754
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||| |||||||||||  |||||||||||||||||| |  ||||||||| |||||||||    
T  12124694 ctcagttggtaaggacaatg--cataatatatgcaaggtccggagttcgaacctcaaacacca 12124754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 25274880 - 25274820
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||| |||| ||||||  ||||||||||| |||||||| |||||||||||| |||||||    
T  25274880 ctcagttggtaagaacaatg--cataatatatgtaaggtctggggttcgaaccccgaacacca 25274820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 28771592 - 28771660
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||| |||||||||||  ||||||||||||||| || | ||||||||||||  |||||| |||||||    
T  28771592 ctcagttggtaaggacaatg--cataatatatgcaagatccgcggttcgaaccccggacaccaccaaaaaa 28771660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 3503002 - 3503044
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  3503002 tgcataatatatgcaaggtctgagattcgaaccctgaacacca 3503044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 9547467 - 9547408
Alignment:
Q  70 agctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||| ||||||||||||| ||||||||  ||||||||||||||||| || ||||| ||||||    
T  9547467 agcttaactcagttgatatggacaatg--cataatatatgcaaggtttggggttcaaacccc 9547408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 10723967 - 10724001
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||||||||||||| ||||||    
T  10723967 tgcataatatatgcaaggtctgaggttcaaacccc 10724001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 19156195 - 19156149
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaa 145  Q
    ||||||||||||||||| |||||||| ||||||| |||||| |||||    
T  19156195 cataatatatgcaaggtttgaggttcaaaccccagacaccaccaaaa 19156149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 37320577 - 37320518
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||| |||||||||| ||| |||||||  |||||||||||||||||  ||||||||||||    
T  37320577 tgagcttaactcagttggtaaagacaatg--cataatatatgcaaggttcgaggttcgaacc 37320518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 42475143 - 42475109
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||||| |||||||||||||||||||||||||||    
T  42475143 tgcataaaatatgcaaggtctgaggttcgaacccc 42475109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 10332335 - 10332281
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||| | ||||||||||||||||||  ||||||||||||| |||||| |||||||    
T  10332335 tgagcttagctcagttgataaggacaa--tgcataatatatggaaggtcggaggttc 10332281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 19549430 - 19549496
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||| |||||||| ||||||| || || | ||||||  |||||||||||||||||||||| ||||||||    
T  19549430 gtcctcatgagcttaactcagctggtatgaacaatg--cataatatatgcaaggtctgagattcgaacc 19549496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 131
Target Start/End: Complemental strand, 25048866 - 25048837
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||||||||||||||||||||||||||||    
T  25048866 aatatatgcaaggtctgaggttcgaacccc 25048837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 35757401 - 35757434
Alignment:
Q  96 gtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    ||||||||||||||||| ||||||||||||||||    
T  35757401 gtgcataatatatgcaaagtctgaggttcgaacc 35757434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 2661067 - 2661031
Alignment:
Q  103 atatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||||||||| |||||||||||||||| |||||    
T  2661067 atatatgcaaggtccgaggttcgaaccccaaccacca 2661031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 4897544 - 4897589
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggt 115  Q
    |||||| |||||||||| |||||||||  |||||||||||||||||||    
T  4897544 tgagcttaactcagttggtaaggacaa--tgcataatatatgcaaggt 4897589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 4944938 - 4944983
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggt 115  Q
    |||||| |||||||||| |||||||||  |||||||||||||||||||    
T  4944938 tgagcttaactcagttggtaaggacaa--tgcataatatatgcaaggt 4944983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 7302192 - 7302140
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    ||||||||||| ||||||||  ||||| |||||||||||||| |||||||||||||    
T  7302192 ctcagttgatagggacaatg--cataaaatatgcaaggtctg-ggttcgaacccca 7302140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 8920518 - 8920558
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    ||||||||||||||||| |||||||||||  ||||||||||    
T  8920518 cataatatatgcaaggtttgaggttcgaattccaaacacca 8920558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 11810430 - 11810381
Alignment:
Q  80 agttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||  |||||||| ||||| ||||| ||||||||||||    
T  11810430 agttgataaggacaatg--cataatatgtgcaaagtctggggttcgaacccc 11810381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 12599896 - 12599864
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||||||||| ||||||||||||    
T  12599896 cataatatatgcaaggtctggggttcgaacccc 12599864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 18324954 - 18324885
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| |||||||||| |||||||||  ||||||||||||||||| |||  | |||||||||  |||||||    
T  18324954 tgagcttaactcagttggtaaggacaa--tgcataatatatgcaagatctaggattcgaaccctgaacacca 18324885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 20239344 - 20239401
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| |||||| |||||| ||| ||||  ||||||||||||||||||| |||||||||    
T  20239344 tgagcttaactcaattgatagggataatg--cataatatatgcaaggtctaaggttcgaa 20239401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 20565135 - 20565066
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| | |||||||| || ||||||||  |||||||||||||||||| | ||||| |||||||| |||||    
T  20565135 tgagcttagctcagttggtagggacaatg--cataatatatgcaaggtccggggttcaaaccccaaccacca 20565066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 25186293 - 25186240
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    ||||||||||| ||||||||  |||||||||||||||||| | ||||| |||||||    
T  25186293 ctcagttgatatggacaatg--cataatatatgcaaggtccggggttcaaacccca 25186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 26133580 - 26133535
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggt 115  Q
    |||||| |||||||||| |||||||||  |||||||||||||||||||    
T  26133580 tgagcttaactcagttggtaaggacaa--tgcataatatatgcaaggt 26133535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 28202298 - 28202375
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| | ||||||||||| ||||||||  ||||||||||| |||||| || |||| |||||||| ||| || ||||||    
T  28202298 tgagcttagctcagttgatagggacaatg--cataatatatgtaaggtccgaagttcaaaccccaatcacaaaaaaaaaa 28202375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 31815947 - 31815886
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||||||||| || ||||||||  |||||||||||||||||| | ||||| ||||||    
T  31815947 tgagcttaactcagttggtagggacaatg--cataatatatgcaaggtccggggttcaaacccc 31815886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 32844865 - 32844941
Alignment:
Q  69 gagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaag 148  Q
    ||||| |||||||||||||| || ||||  ||||||||||| ||||||   ||||||||||||| ||||| |||||||||    
T  32844865 gagcttaactcagttgataatgataatg--cataatatatgtaaggtccacggttcgaaccccagacacc-acaaaaaag 32844941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 35685112 - 35685063
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    |||||||| |||||||||||  |||||||||||||||||||  |||||||||    
T  35685112 ctcagttggtaaggacaatg--cataatatatgcaaggtctagggttcgaac 35685063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 25384 - 25467
Alignment:
Q  62 tccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||| |||||| |||||||||| |||||||||||  ||||||||||||||||||   ||||||||||||| |||||| |||||||    
T  25384 tccccgtgagcttaactcagttggtaaggacaatg--cataatatatgcaaggtccagggttcgaaccccagacaccaccaaaaaa 25467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 30623294 - 30623371
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| | |||||||| |||||||||||  |||||||||||||||||||| |||||||||||| ||||| | |||||||    
T  30623294 tgagcttagctcagttggtaaggacaatg--cataatatatgcaaggtctggggttcgaaccccgaacacgaccaaaaaa 30623371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 9656059 - 9655989
Alignment:
Q  66 catgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacc 138  Q
    |||||||| | |||||||| |||||||||||  ||||| |||||||||||| |||||||||||||||| ||||    
T  9656059 catgagcttagctcagttggtaaggacaatg--cataaaatatgcaaggtccgaggttcgaaccccaaccacc 9655989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 8442546 - 8442493
Alignment:
Q  69 gagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    ||||| |||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  8442546 gagcttaactcagttggtaaggacaatg--cataatatatgcaaggtctgaggttc 8442493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 9019631 - 9019555
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    ||||| ||||||| ||| |||||| ||| |||||||  |||||||||||||||||||  |||| |||||||||||||||    
T  9019631 gtcccgatgagcttaacgcagttggtaaagacaatg--cataatatatgcaaggtcttgggtttgaaccccaaacacca 9019555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 147
Target Start/End: Original strand, 19778059 - 19778143
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| |||||| | |||||||| |||||||||||  |||||||||||||||||| | |||||||| || | |||||| |||||||    
T  19778059 gtccccgtgagcttagctcagttggtaaggacaatg--cataatatatgcaaggtccggggttcgaatcctagacaccaccaaaaaa 19778143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 41430822 - 41430763
Alignment:
Q  78 tcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||||||| |||||||  ||||||||| |||  |||||||||||||||||||||||||    
T  41430822 tcagttgataagaacaatgt--ataatatatacaatatctgaggttcgaaccccaaacacca 41430763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 8984561 - 8984491
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaa 133  Q
    ||||||||||||| |||||||||| || ||| |||||  |||||||||||||||| ||| ||||||| |||||    
T  8984561 gtccccatgagcttaactcagttggtatggataatgt--ataatatatgcaaggtttgatgttcgaatcccaa 8984491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 1244756 - 1244704
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||| |||||||||||  |||||||||| ||||||||| ||||||||||||    
T  1244756 ctcagttggtaaggacaatg--cataatatatacaaggtctggggttcgaacccc 1244704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 129
Target Start/End: Complemental strand, 13032393 - 13032363
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||||||||||||||||||||||||||||    
T  13032393 cataatatatgcaaggtctgaggttcgaacc 13032363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 24033257 - 24033329
Alignment:
Q  68 tgagctaaactcagttgataaggacaatg--tgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| |||| ||||| |||||||||||  |  ||||||||||||||||||| |||||||||||||| |||||    
T  24033257 tgagcttaacttagttggtaaggacaatgcatatataatatatgcaaggtctg-ggttcgaaccccaatcacca 24033329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 27750964 - 27750905
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||| | |||||||| ||||||||  ||||||||||||||||||||| | ||||||||||    
T  27750964 tgagcttagctcagttggtaaggaca--gtgcataatatatgcaaggtccggggttcgaacc 27750905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 29499799 - 29499849
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||| ||||||||||||   |||||||||||||||||||| |||||||    
T  29499799 tgcataaaatatgcaaggtccagggttcgaaccccaaacaccaccaaaaaa 29499849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 41625222 - 41625272
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||| |||||||  |||||||||||||| |||||| ||||||    
T  41625222 tgcataatatatgtaaggtctagggttcgaaccccaaccaccaaaaaaaaa 41625272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 42200722 - 42200663
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||| | ||||||||||| |||||||||  |||||||||||| |||||||||||| ||||    
T  42200722 tgagcttagctcagttgatagggacaatgt--ataatatatgcatggtctgaggttcaaacc 42200663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 29186503 - 29186557
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||| |||||||||| |||||||||  ||| ||||||||||||||| ||||||||    
T  29186503 tgagctcaactcagttggtaaggacaa--tgcgtaatatatgcaaggtatgaggttc 29186557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 32944893 - 32944839
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||| || ||||||||  ||||| |||||||||||||||||||| ||||||    
T  32944893 aactcagttggtatggacaatg--cataaaatatgcaaggtctgaggttcaaacccc 32944839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 38763548 - 38763515
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||||||||||||||||||| |||||||||||    
T  38763548 tgcataatatatgcaaggtctggggttcgaaccc 38763515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 42208520 - 42208470
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||||| |||||||||||  |||||||||||||||||| ||||||| ||||    
T  42208520 ctcagttggtaaggacaatg--cataatatatgcaaggtccgaggttcaaacc 42208470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 6314383 - 6314322
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| | ||||||||||||||||||  ||||||| |||||||||||| ||  ||||||||||    
T  6314383 tgagcttagctcagttgataaggacaa--tgcataaaatatgcaaggtccgaaattcgaacccc 6314322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 9070968 - 9071017
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    |||||||| ||||||||||||  |||||||||| |||||| |||||||||||    
T  9070968 ctcagttggtaaggacaatgt--ataatatatgtaaggtccgaggttcgaac 9071017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 10290847 - 10290803
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaa 146  Q
    |||||||||| |||||||||||||||  |||||||||| ||||||    
T  10290847 aatatatgcagggtctgaggttcgaattccaaacaccatcaaaaa 10290803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 32944942 - 32944987
Alignment:
Q  84 gataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||||||  ||||||||||||||||||||| |||| ||||||    
T  32944942 gataaggacaatg--cataatatatgcaaggtctgaagttcaaacccc 32944987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 28039920 - 28039859
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||||||||| |||||||    
T  28039920 tgagcttaactcagttggtaaggacaatg--cataatatatgcaaggtctgaggtttgaacccc 28039859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 22335386 - 22335433
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaa 144  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  22335386 tgcataatatatgcaaggtctgaggttcaaaccccgaacaccaacaaa 22335433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 47528514 - 47528430
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| |||||| | |||||||| |||||||||||  ||||||||| |||||||| ||||||||||||||  |||||| |||||||    
T  47528514 gtccccgtgagcttagctcagttggtaaggacaatg--cataatatacgcaaggtccgaggttcgaaccccggacaccaccaaaaaa 47528430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 16580866 - 16580783
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaa 146  Q
    |||||| |||||| || ||||||| || |||||||||  ||||||||||||||||||| |||||||| ||||| |||||| |||||    
T  16580866 gtccccgtgagcttaattcagttggtatggacaatgt--ataatatatgcaaggtctggggttcgaatcccaaccaccaaaaaaaa 16580783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 18056784 - 18056715
Alignment:
Q  60 cgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||||| | |||| |||||||||| |||||||||||  |||||||||||||| || |||||||||||||||    
T  18056784 cgtccccgtaagcttaactcagttggtaaggacaatg--cataatatatgcaatgtgtgaggttcgaacccc 18056715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 23405425 - 23405341
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||| |||| ||||| |||||||||  ||||||||||||||||||||   |||||||| ||| | ||||| |||||||    
T  23405425 gtccccatgagcttaacttagttgttaaggacaa--tgcataatatatgcaaggtccagggttcgaatcccgaccaccaccaaaaaa 23405341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 41950114 - 41950067
Alignment:
Q  100 ataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||    
T  41950114 ataatatatgcaaggtctgaggttcgaaccccgaccaccaccaaaaaa 41950067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 29251782 - 29251815
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    ||||||||||||||||||||||||||||||||||    
T  29251782 tgcataatatatgcaaggtctgaggttcgaaccc 29251815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 29987165 - 29987103
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    ||||||||||  ||||||||||  ||||||||||||||||||||  ||||||||||||| |||||    
T  29987165 aactcagttggcaaggacaatg--cataatatatgcaaggtctggagttcgaaccccaaccacca 29987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 30937488 - 30937534
Alignment:
Q  80 agttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  30937488 agttgataaggacaatgt--ataatatatgcaaggtctggggttcgaac 30937534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 38448934 - 38448852
Alignment:
Q  60 cgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaa 144  Q
    ||||||| |||||| | |||||||| |||||||||||  |||||||||||||||||| | |||||||| |||  |||||| ||||    
T  38448934 cgtccccgtgagcttagctcagttggtaaggacaatg--cataatatatgcaaggtccggggttcgaatcccggacaccaccaaa 38448852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 10132494 - 10132445
Alignment:
Q  78 tcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    ||||||| |||||||||||  |||||||||||||||||||| ||||||||||    
T  10132494 tcagttggtaaggacaatg--cataatatatgcaaggtctggggttcgaacc 10132445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 15382879 - 15382822
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| ||||||||||||| | |||||||  ||||||||||||||||| ||||||||||    
T  15382879 tgagcttaactcagttgatatgaacaatgt--ataatatatgcaaggtccgaggttcgaa 15382822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 19262967 - 19262890
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| | ||||||||||||||||||||  ||||| |||||||| ||  | ||||||||||||| |||||| |||||||    
T  19262967 tgagcttagctcagttgataaggacaatg--cataacatatgcaaagttcggggttcgaaccccagacaccaccaaaaaa 19262890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 33153940 - 33153871
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||| |||||||||| || ||||||||  ||||||||||| |||||| ||||||| |||||| |||||||    
T  33153940 tgagcttaactcagttggtagggacaatg--cataatatatgtaaggtccgaggttcaaaccccgaacacca 33153871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 2665336 - 2665293
Alignment:
Q  97 tgcataata-tatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  2665336 tgcataataatatgcaaggtctgaggttcgaaccccaaccacca 2665293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 3937575 - 3937520
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    |||||||| |||||||||||  |||||||||||||||||| | ||||| |||||||    
T  3937575 ctcagttgttaaggacaatgcacataatatatgcaaggtccggggttcaaacccca 3937520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 5033551 - 5033603
Alignment:
Q  76 actcagttgataagg-acaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    ||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||    
T  5033551 actcagttgataagggaca--gtgcataatatatgcaaggtctggggttcgaacc 5033603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 131
Target Start/End: Original strand, 5280658 - 5280693
Alignment:
Q  96 gtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    ||||||||||||||||||||||| ||||||||||||    
T  5280658 gtgcataatatatgcaaggtctggggttcgaacccc 5280693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 6000210 - 6000142
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||| | |||||||||| | |||||||||  |||||||||||||||||| ||||||| ||||||    
T  6000210 gtccccgtgagtttaactcagttggttaggacaatg--cataatatatgcaaggtccgaggttcaaacccc 6000142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 9398473 - 9398397
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaa 146  Q
    |||| |||||||||||| |||| ||||||  ||| ||||||| |||||||| ||||||||||||| ||| || ||||||    
T  9398473 tgagataaactcagttggtaagaacaatg--catgatatatgtaaggtctggggttcgaaccccagacaacaccaaaaa 9398397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 9872156 - 9872088
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||| |||||| ||||  ||||||||||||||||| || ||||||||||||| ||| || |||||||    
T  9872156 ctcagttggtaaggataatg--cataatatatgcaaggtttgcggttcgaaccccagacagcaccaaaaaa 9872088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 13615663 - 13615603
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||| |||||||||||  ||||||| ||||||||||  ||||||||||||| |||||||    
T  13615663 ctcagttggtaaggacaatg--cataatacatgcaaggtccaaggttcgaaccccgaacacca 13615603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 17221587 - 17221519
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| |||| | |||| ||||| |||| ||||||  |||||||||||||||||| ||||||||||||||    
T  17221587 gtccccgtgagtttaactaagttggtaagaacaatg--cataatatatgcaaggtccgaggttcgaacccc 17221519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 30795711 - 30795779
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||| |||| ||||||  ||||||||||||||||||  |||||||||||  |||||||| |||||||    
T  30795711 ctcagttggtaagaacaatg--cataatatatgcaaggtccaaggttcgaaccttaaacaccaccaaaaaa 30795779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 33020076 - 33020041
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    |||||||||||||||||||||||||||| |||||||    
T  33020076 tgcataatatatgcaaggtctgaggttcaaacccca 33020041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 34366370 - 34366282
Alignment:
Q  57 aatcgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||  |||||| |  ||||||||||| ||||  |||||||| ||||||||||||||||||| ||||||   ||||||| ||||||    
T  34366370 aatcgtccctttgagcttagttcagttgataaagaca--gtgcataacatatgcaaggtctgaggtttgaaccctggacaccaaaaaaaaa 34366282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 147
Target Start/End: Original strand, 912311 - 912386
Alignment:
Q  70 agctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||| ||| |||||||||| | ||||||  |||||||||  ||||||||||||| |||||||| |||||| |||||||    
T  912311 agcttaacacagttgataaagtcaatgt--ataatatatataaggtctgaggtttgaaccccagacaccatcaaaaaa 912386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 29234007 - 29233965
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    ||||||| |||||||||||||| |||||||||||||| |||||    
T  29234007 tgcataaaatatgcaaggtctggggttcgaaccccaaccacca 29233965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 32944764 - 32944814
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||| ||||| |||||||||||| | ||||| |||||||    
T  32944764 tgcataatatatgcaacgtctggggttcgaaccccgaccaccaccaaaaaa 32944814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 34766861 - 34766920
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||| |||||||||| || |||||||||  |||||| |||||||||||| ||||||||||    
T  34766861 tgagcttaactcagttggtatggacaatgt--ataatacatgcaaggtctggggttcgaacc 34766920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 35442856 - 35442915
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    ||||||||||||||||| || | ||||||  |||||||||| ||||||| ||||||||||||    
T  35442856 tgagctaaactcagttggtatgaacaatg--cataatatattcaaggtccgaggttcgaacc 35442915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 35778234 - 35778200
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||| ||||||||||||||||||||||||||||||    
T  35778234 tgcacaatatatgcaaggtctgaggttcgaacccc 35778200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 1408428 - 1408478
Alignment:
Q  60 cgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaa 112  Q
    ||||||||| |||| |||||||||| |||||||||  ||||||||||||||||    
T  1408428 cgtccccataagcttaactcagttggtaaggacaa--tgcataatatatgcaa 1408478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 3157750 - 3157701
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaa 146  Q
    |||||||||||| |||||| |||||||| |||||||| ||||| ||||||    
T  3157750 tgcataatatatacaaggtttgaggttcaaaccccaaccaccaccaaaaa 3157701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 9639884 - 9639818
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||| |||||| |||||| ||| |||||||||||  |||||||||||||||||| |  |||||||||    
T  9639884 gtccccgtgagcttaactcacttggtaaggacaatg--cataatatatgcaaggtccggagttcgaacc 9639818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 16033502 - 16033456
Alignment:
Q  76 actcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||||||||| ||||||||  |||||||||||||||||||| |||||    
T  16033502 actcagttgatagggacaatg--cataatatatgcaaggtctggggttc 16033456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 28832231 - 28832177
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||| |||||||||| || | ||||||  ||||||||||||||||||||||||||    
T  28832231 tgagcttaactcagttggtatgaacaatg--cataatatatgcaaggtctgaggttc 28832177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 30561751 - 30561784
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    ||||||||||||||||||||| ||||||||||||    
T  30561751 tgcataatatatgcaaggtctaaggttcgaaccc 30561784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 45481486 - 45481552
Alignment:
Q  60 cgtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    ||||||| |||||| || ||| ||| |||||||||||  |||||||||||||||||| | |||||||||    
T  45481486 cgtccccgtgagcttaattcatttggtaaggacaatg--cataatatatgcaaggtccggggttcgaac 45481552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 46335092 - 46335059
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||||||||||||||||||||||||||| |||||    
T  46335092 tgcataatatatgcaaggtctgaggttcaaaccc 46335059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 49875659 - 49875613
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtc 116  Q
    |||||| |||||||||| |||||||||  ||||||||||||||||||||    
T  49875659 tgagcttaactcagttggtaaggacaa--tgcataatatatgcaaggtc 49875613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 13054901 - 13054933
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||||||||||||||||| ||||||||||||    
T  13054901 tgcataatatatgcaaggtcggaggttcgaacc 13054933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 17034780 - 17034857
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| |||||||||||||| || |||||  ||||||||  ||| || || ||||||||| |||||||| |||||||||    
T  17034780 tgagcttaactcagttgataaagataatgt--ataatataaacaacgtttggggttcgaactccaaacactaacaaaaaa 17034857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 29798167 - 29798106
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaa 140  Q
    |||||| |||||| ||||||  ||||||||||| |||||||| ||||||||| ||| |||||||    
T  29798167 ctcagtcgataagaacaatg--cataatatatgtaaggtctggggttcgaacaccagacaccaa 29798106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 34808623 - 34808566
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| | |||||||| |||||||||||  |||||||||||||||||  ||||||||||    
T  34808623 tgagcttagctcagttgttaaggacaatg--cataatatatgcaaggttcgaggttcgaa 34808566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 41362647 - 41362679
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaacc 129  Q
    |||||||||||||||||||| ||||||||||||    
T  41362647 tgcataatatatgcaaggtcggaggttcgaacc 41362679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 42416813 - 42416862
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    ||||||||||||||| ||||  ||||||||||||||||| || |||||||||    
T  42416813 ctcagttgataaggataatg--cataatatatgcaaggtttggggttcgaac 42416862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 404164 - 404240
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaa 146  Q
    |||||| |||| ||||| |||||||||||  |||||||||||||| ||| ||||||||||||||| |||||| ||||||    
T  404164 tgagcttaacttagttggtaaggacaatg--cataatatatgcaatgtccgaggttcgaaccccagacaccaccaaaaa 404240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 12808897 - 12808947
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  12808897 tgcataatatatgcaaggtctggggttcgaaccccaaacacaaaaaaaaaa 12808947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 35110082 - 35110132
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  35110082 tgcataatatatgtaaggtttgaggttcgaaccccaaacaccaccaaaaaa 35110132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 10278461 - 10278528
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaa 144  Q
    |||||| |||||| ||||||||  ||||||||||||||| ||||| ||||||||||||| ||||| ||||    
T  10278461 aactcaattgatatggacaatg--cataatatatgcaagatctgaagttcgaaccccaaccaccaccaaa 10278528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 28046228 - 28046170
Alignment:
Q  78 tcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacc 138  Q
    ||||||||||| |||||||  ||||||||||||||||| ||||||| ||||||| ||||||    
T  28046228 tcagttgataaagacaatg--cataatatatgcaaggtttgaggtttgaaccccgaacacc 28046170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 31971532 - 31971590
Alignment:
Q  70 agctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||| ||||||| |||||    
T  31971532 agcttaactcagttggtaaggacaatg--cataatatatgcaaggtccgaggttcaaaccc 31971590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 17829368 - 17829300
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacc 138  Q
    |||||| | |||||||| ||||||| |||  |||||||||||||| ||| |||||||||||||| ||||||    
T  17829368 tgagcttagctcagttggtaaggactatg--cataatatatgcaaagtccgaggttcgaaccccgaacacc 17829300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 6610085 - 6610153
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||| |||||  ||||||||||||||| |||  |||||||||||   ||||||||||||||    
T  6610085 aactcagttgataagggcaatg--cataatatatgcaagatctagggttcgaaccc--gacaccaacaaaaaa 6610153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 21865467 - 21865425
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||    
T  21865467 tgcataatatatgcaaggtctaaggttagaaccccagacacca 21865425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 127
Target Start/End: Complemental strand, 30639459 - 30639429
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||||||||||||||||||||||||||||    
T  30639459 tgcataatatatgcaaggtctgaggttcgaa 30639429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 2726470 - 2726416
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||||||| || ||||||||  |||||||||||||||||| | ||||||||||||    
T  2726470 aactcagttggtatggacaatg--cataatatatgcaaggtccggggttcgaacccc 2726416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 3024575 - 3024632
Alignment:
Q  80 agttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacac 137  Q
    ||||| |||||| |||||  |||||||||||||| ||||| |||||||||| ||||||    
T  3024575 agttggtaaggataatgtatataatatatgcaagatctgatgttcgaaccctaaacac 3024632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 6864196 - 6864150
Alignment:
Q  65 ccatgagctaaactcagttgataaggacaatgtgcataatatatgcaag 113  Q
    ||||||||| ||||||||||| ||||||||  |||||||||||||||||    
T  6864196 ccatgagcttaactcagttgaaaaggacaa--tgcataatatatgcaag 6864150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 14049944 - 14049890
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||||| ||||||||||   |||||||  ||||||||||||||||||||||||||    
T  14049944 tgagctaagctcagttgattgagacaatg--cataatatatgcaaggtctgaggttc 14049890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 15291750 - 15291692
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaac 128  Q
    |||||| |||| ||||| |||||||||||   |||||||||||||||| ||||||||||||    
T  15291750 tgagcttaacttagttggtaaggacaatga--ataatatatgcaaggtttgaggttcgaac 15291692  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 18256884 - 18256930
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtc 116  Q
    |||||| | ||||||||||||||||||  ||||||||||||||||||||    
T  18256884 tgagcttagctcagttgataaggacaa--tgcataatatatgcaaggtc 18256930  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 33824891 - 33824941
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    ||||||||||||||||||||  |||||||||||||||||| | ||||| ||||    
T  33824891 ctcagttgataaggacaatg--cataatatatgcaaggtccggggttcaaacc 33824941  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 334150 - 334195
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||||||||| |||||||  |||||||||||||||||||| |||||    
T  334150 ctcagttgataaagacaatg--cataatatatgcaaggtctggggttc 334195  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 3808185 - 3808116
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    |||||| ||| || |||||||||  |||||||||||  |||||||||||||||||| ||| ||| |||||||    
T  3808185 gtccccgtgaacttaactcagttagtaaggacaatg--cataatatatgcaaggtccgagattcaaacccca 3808116  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 4450263 - 4450320
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||| | |||||||||||| |||||||  |||||||||||||||||| | ||||||||    
T  4450263 tgagcttagctcagttgataaagacaatg--cataatatatgcaaggtccggggttcgaa 4450320  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 7273043 - 7273112
Alignment:
Q  60 cgtccccatgagctaaactcagttgataagg-acaatgtgcataatatatgcaaggtctgaggttcgaaccc 130  Q
    ||||||| |||||| |||||||||| ||||| | ||||   ||||||||||||||||||| |||||||||||    
T  7273043 cgtccccgtgagcttaactcagttggtaagggataatga--ataatatatgcaaggtctgtggttcgaaccc 7273112  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 8381261 - 8381192
Alignment:
Q  61 gtccccatgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    |||||| |||||| |||||||||| ||| |||||||  ||||| ||||||||||||   |||||||||||||    
T  8381261 gtccccgtgagcttaactcagttggtaaagacaatg--cataacatatgcaaggtccagggttcgaacccca 8381192  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 12232233 - 12232164
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacca-acaaaaaa 147  Q
    ||||||||||| ||||||||  |||||||||||||  ||||| |||||||||||| | ||||| ||||||||    
T  12232233 ctcagttgatagggacaatg--cataatatatgcagtgtctggggttcgaaccccgaccaccacacaaaaaa 12232164  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 15187064 - 15187125
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| | ||||| ||||||| ||||||  |||||||||||||||||| ||||||| ||||||    
T  15187064 tgagcttagctcagctgataagtacaatg--cataatatatgcaaggtccgaggttcaaacccc 15187125  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 15473542 - 15473481
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| | ||||| ||||||| ||||||  |||||||||||||||||| ||||||| ||||||    
T  15473542 tgagcttagctcagctgataagtacaatg--cataatatatgcaaggtccgaggttcaaacccc 15473481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 20744139 - 20744200
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| | |||||||| || ||||||||  |||||||||||||||||||| ||||| ||||||    
T  20744139 tgagcttagctcagttggtatggacaatg--cataatatatgcaaggtctggggttcaaacccc 20744200  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 28757084 - 28757039
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggt 115  Q
    |||||| |||||||||| ||||||||||||  ||||||||||||||||    
T  28757084 tgagcttaactcagttggtaaggacaatgt--ataatatatgcaaggt 28757039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 28758323 - 28758275
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaa 145  Q
    |||||||||||||||| ||| ||||||| |||||| ||||||| |||||    
T  28758323 tgcataatatatgcaaagtccgaggttcaaaccccgaacaccaccaaaa 28758275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 29069484 - 29069545
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccc 131  Q
    |||||| | ||||||||||| ||||||||  ||||||||||| || ||||||||||| ||||||    
T  29069484 tgagcttagctcagttgatagggacaatg--cataatatatgaaaagtctgaggttcaaacccc 29069545  T

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Target: scaffold0334 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 5210 - 5252
Alignment:
Q  97 tgcataatatatgcaaggtctgaggttcgaaccccaaacacca 139  Q
    |||||||||||||||||||||||||||| |||||||| |||||    
T  5210 tgcataatatatgcaaggtctgaggttcaaaccccaaccacca 5252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 15990 - 15928
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacccca 132  Q
    |||||| |||||| ||| ||||||||||||  ||||||||||||||||||| ||||| |||||||    
T  15990 tgagcttaactcaattggtaaggacaatgt--ataatatatgcaaggtctggggttcaaacccca 15928  T

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Target: scaffold0426 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 5900 - 5823
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| | ||||||||| ||| | |||||  |||||||||| |||||||| ||||||||||||| |||||| |||||||    
T  5900 tgagcttagctcagttgaaaagaataatgt--ataatatatgtaaggtctggggttcgaaccccagacaccaccaaaaaa 5823  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 75326 - 75383
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaa 127  Q
    |||||||| |||||||| |||||||||||  |||||||||||||||||| | ||||||||    
T  75326 tgagctaagctcagttggtaaggacaatg--cataatatatgcaaggtccggggttcgaa 75383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1694 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1694
Description:

Target: scaffold1694; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 165 - 215
Alignment:
Q  77 ctcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaacc 129  Q
    ||||||||||| ||||||||  |||||| ||||||||||||||||||| ||||    
T  165 ctcagttgatatggacaatg--cataatgtatgcaaggtctgaggttcaaacc 215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 4624 - 4579
Alignment:
Q  102 aatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||||||||||||   |||||||||||||||||||| |||||||    
T  4624 aatatatgcaaggtcccgggttcgaaccccaaacaccaccaaaaaa 4579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 34948 - 34902
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtc 116  Q
    |||||| |||||||||| |||||||||  ||||||||||||||||||||    
T  34948 tgagcttaactcagttggtaaggacaa--tgcataatatatgcaaggtc 34902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 99046 - 99092
Alignment:
Q  76 actcagttgataaggacaatgtgcataatatatgcaaggtctgaggttc 124  Q
    |||||||||||| ||||||||  |||||||||||||||||||| |||||    
T  99046 actcagttgatagggacaatg--cataatatatgcaaggtctggggttc 99092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 557 - 634
Alignment:
Q  68 tgagctaaactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    |||||| | |||||||||||||||||  ||| |||||||||| ||||||||| | | ||||||| | |||||| ||||||    
T  557 tgagcttagctcagttgataaggaca--gtgtataatatatgtaaggtctgacgcttgaaccccgaccaccaaaaaaaaa 634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 3171 - 3218
Alignment:
Q  99 cataatatatgcaaggtctgaggttcgaaccccaaacaccaacaaaaaa 147  Q
    ||||||||||||||||||||| |||| ||||| || |||||||||||||    
T  3171 cataatatatgcaaggtctga-gttcaaacccgaaccaccaacaaaaaa 3218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 48029 - 48090
Alignment:
Q  75 aactcagttgataaggacaatgtgcataatatatgcaaggtctgaggttcgaaccccaaacacc 138  Q
    ||||||||||||||| | ||||  ||||||||||||||||||||  ||| |||||||| |||||    
T  48029 aactcagttgataagcataatg--cataatatatgcaaggtctggagttagaaccccatacacc 48090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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