View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10269_low_33 (Length: 210)
Name: NF10269_low_33
Description: NF10269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10269_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 15714523 - 15714351
Alignment:
| Q |
19 |
accctagtaaatgaccaacctgatgcatcacagcagattccaaatccacatcatcctcttcaacaacattttcactaggtaacacccattgttcatctgc |
118 |
Q |
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| T |
15714523 |
acccaagtaaatgaccaacttgatgcatcacaacagattccaaatccacatcatcctcttcaacaacattttcactaggtaacacccattgttcatctgc |
15714424 |
T |
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| Q |
119 |
atccaaatatacactgccaacataaacactactgtttatataactgcctccaaccgttccaccttttccatcc |
191 |
Q |
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||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
15714423 |
atccaaatatacacttccaacattaacactactgtttatataactgcctccaactgttccaccttttccatcc |
15714351 |
T |
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