View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10269_low_35 (Length: 206)

Name: NF10269_low_35
Description: NF10269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10269_low_35
NF10269_low_35
[»] chr8 (1 HSPs)
chr8 (14-69)||(9516040-9516095)


Alignment Details
Target: chr8 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 9516095 - 9516040
Alignment:
14 aagaatgatgggtgtgaggagaataaggattatgaatttgtaagataacatggtag 69  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
9516095 aagaatgatgggtgtgaggggaataaggattatgaatttgtaagataacatggtag 9516040  T

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