View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10269_low_9 (Length: 384)
Name: NF10269_low_9
Description: NF10269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10269_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 47 - 373
Target Start/End: Complemental strand, 46230821 - 46230509
Alignment:
| Q |
47 |
tgctcataacatacggaggaataaattgcatcaccgatttgatgagaacttctcataccggcttgagataagcccttgctactcccaagattattttctt |
146 |
Q |
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| T |
46230821 |
tgctcataacatacggaggaataaattgcatcaccgatttgatgagaacttctcataccggcttgagataagcccttgctactccacaaattattttctt |
46230722 |
T |
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| Q |
147 |
ccagattccttaatgaatttaaaaatagatttcccacttcataaacggtaagtcgaggtactttcaagtacccaacacttgttgaactccacaagtatta |
246 |
Q |
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| T |
46230721 |
ccagattccttaatgaatttaaaaatagatttcccacttcataaacggtaagtcgaggtactttcaagtacccaacacttgttgaactccacaagtatta |
46230622 |
T |
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| Q |
247 |
tcaatagagttgttgacagtttgttgcacgttacggcggcaatatatcttatatttttgcaaatttatcgaccgacccaaaggtacttcatatacagata |
346 |
Q |
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| T |
46230621 |
tcaat--------------tttgttgcacgttacggcggcaatatatcttatatttttgcaaatttatcgaccgacccaaaggtacttcatatacagata |
46230536 |
T |
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| Q |
347 |
aattatttttcatgatcaaaacttcat |
373 |
Q |
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| T |
46230535 |
aattatttttcatgatcaaaacttcat |
46230509 |
T |
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