View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10270_high_2 (Length: 271)
Name: NF10270_high_2
Description: NF10270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10270_high_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 42038576 - 42038829
Alignment:
| Q |
18 |
cacagaaaacacaaccagtattcacaagcttaaataaacattctaagcgtaagtaggttgtcccgagtgcaacctttactattgtttttgctcttaattt |
117 |
Q |
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| T |
42038576 |
cacagaaaacacaaccagtattcacaagcttaaataaacattctaagcgtaagtaggttgtcccgagtgcgacctttactattgtttttgctcttaattt |
42038675 |
T |
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| Q |
118 |
ggtataccctattataatattgattaatggtggatcctttgtagattacataatacattgtataacaatcaacaccaaaaaccaatgaattaggctcatg |
217 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42038676 |
ggtataacctattataatattgattaatggtggatcctttgtagattacataatacattgtataacaatcaacaccaaaaaccaatgaattaggctcatg |
42038775 |
T |
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| Q |
218 |
tggttaattagttccaccaaaagacgattcattttggagaaccttgagtttgat |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42038776 |
tggttaattagttccaccaaaagacgattcattttggagaaccttgagtttgat |
42038829 |
T |
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