View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10270_low_14 (Length: 240)
Name: NF10270_low_14
Description: NF10270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10270_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 8405783 - 8405560
Alignment:
| Q |
1 |
acacaactctgtatggaaatggtattttacggttggagtcttatctaaccgaccgagcatgctagccatgagtaggtctaagcttaatattagatcatgc |
100 |
Q |
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| T |
8405783 |
acacaactctgtatggaaatggtcttttacagttggagtcttatctaaccgaccgagcatgctagccatgagtaggtctaagcttaatattagatcatgc |
8405684 |
T |
|
| Q |
101 |
tcacttaacccgtccctctgcctatgtctcaatcaacaaactcatgaactgtcaatcctagctctaggaaccctgactggtcattcacagtgggacacat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
8405683 |
tcacttaacccgtccctctgcctatgtctcaatcaactaactcatgaactgtcaatcctagctctaggaaccctgaccggtcattcacagtgggacacat |
8405584 |
T |
|
| Q |
201 |
tatgatgggcgaccgtcaactttg |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
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| T |
8405583 |
tatgatgggcgaccgtcaactttg |
8405560 |
T |
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