View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10271_high_19 (Length: 368)
Name: NF10271_high_19
Description: NF10271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10271_high_19 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 51756375 - 51756647
Alignment:
| Q |
1 |
taatcctctcctcattcatgctctttgggactcaaatttgtaacgcaaagtgttgatatagagcaaccaattaattctccgtatattttttctgtatctc |
100 |
Q |
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||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
51756375 |
taatcatctcctcattcatgctctttggctctcaaatttgtaacgcaaagtgttgatatagagcaaccaattaattctccgtacattttttctgtatctc |
51756474 |
T |
|
| Q |
101 |
tttttgtcaatcatgtatataaaattaatattccatattcaagtatcagaaaataaattaagtgtcaaagttggtaatgaattgaagagtgaaatgaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51756475 |
tttttgtcaatcatgtatataaaattaatattccatattcaagtatcagaaaataaattaagtgtcaaagttggtaatgaattgaagagtgaaatgaaat |
51756574 |
T |
|
| Q |
201 |
tgtgttgtgctat----gtagtagataaaccactgataatctcaaatgtccaggagatatagatgtgttcatt |
269 |
Q |
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||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
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| T |
51756575 |
tgtgttgtgctatgtacgtaatagataaaccactgaatatctcaaatgttcaggagatatagatgtgttcatt |
51756647 |
T |
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