View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10271_high_56 (Length: 232)
Name: NF10271_high_56
Description: NF10271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10271_high_56 |
 |  |
|
| [»] scaffold1749 (1 HSPs) |
 |  |  |
|
| [»] scaffold0428 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 31151127 - 31151355
Alignment:
| Q |
1 |
ttcaggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31151127 |
ttcaggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatg-attttctttgcagggcagcaaaaagatgatcagtgaagttg |
31151225 |
T |
 |
| Q |
101 |
aggcgtgtatctttacctctaaagctgacaaacacgtcataataatttctccttggagatgacgagatgctgcta---ctgctgctgctgattttgatga |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31151226 |
aggcgtgtatctttacctctaaagctgacaaacacgtcataataatttctccttggagatgacgagatgctgctactgctgctgctgctgattttgatga |
31151325 |
T |
 |
| Q |
198 |
tactattattactgctggtgatgtccatct |
227 |
Q |
| |
|
|||||||||||||||||||| || |||||| |
|
|
| T |
31151326 |
tactattattactgctggtgctggccatct |
31151355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 31488925 - 31488783
Alignment:
| Q |
5 |
ggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggc |
104 |
Q |
| |
|
|||||||| ||||||||||| | |||||||| ||||| || || | |||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |
|
|
| T |
31488925 |
ggtgctatcgattcacctttttgaagcttagtgtcatctctaaacgcaaaaatgccttttctttgaagggcagcaaaaagatgatcagtaaagttgaagc |
31488826 |
T |
 |
| Q |
105 |
gtgtatctttacctctaaagctgacaaacacgtcataataatt |
147 |
Q |
| |
|
| ||||||| |||||| ||| |||||||||||||||||||||| |
|
|
| T |
31488825 |
gagtatcttcacctctgaaggtgacaaacacgtcataataatt |
31488783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 31030508 - 31030650
Alignment:
| Q |
5 |
ggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggc |
104 |
Q |
| |
|
|||| ||||||||||||||| | || ||||| || || || |||| |||||||| ||||||||| ||||||||||||||||||||| ||||||||| || |
|
|
| T |
31030508 |
ggtggtatggattcacctttttgaagattagtgtcgtctctaaatgcaaaaatgccttttctttgaagggcagcaaaaagatgatcaatgaagttgaagc |
31030607 |
T |
 |
| Q |
105 |
gtgtatctttacctctaaagctgacaaacacgtcataataatt |
147 |
Q |
| |
|
| ||||||| ||||||||| |||||||||| ||||||||||| |
|
|
| T |
31030608 |
gagtatcttcgcctctaaaggtgacaaacacatcataataatt |
31030650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 31020627 - 31020769
Alignment:
| Q |
5 |
ggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggc |
104 |
Q |
| |
|
|||| ||||||||||||||| | || |||| || || || |||| |||||||| ||||||||| ||||||||||||||||||||| ||||||||| || |
|
|
| T |
31020627 |
ggtggtatggattcacctttttgaagattagcgtcgtctctaaatgcaaaaatgccttttctttgaagggcagcaaaaagatgatcaatgaagttgaagc |
31020726 |
T |
 |
| Q |
105 |
gtgtatctttacctctaaagctgacaaacacgtcataataatt |
147 |
Q |
| |
|
| ||||||| ||||||||| |||||||||| ||||||||||| |
|
|
| T |
31020727 |
gagtatcttcgcctctaaaggtgacaaacacatcataataatt |
31020769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 31160029 - 31160165
Alignment:
| Q |
5 |
ggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggc |
104 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||| || |||| ||||||||| |||||||||||||||||||| | || ||| | |
|
|
| T |
31160029 |
ggtgctatggattcacctttcttcaggttagaatcatccctgaatgcaacgatgccttttctttgaagggcagcaaaaagatgatcggcaaaattgttgt |
31160128 |
T |
 |
| Q |
105 |
gtgtatctttacctctaaagctgacaaacacgtcata |
141 |
Q |
| |
|
|||| |||| ||||||||||| ||||| |||||||| |
|
|
| T |
31160129 |
gtgtgtcttggcctctaaagctcacaaaaacgtcata |
31160165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 31529284 - 31529424
Alignment:
| Q |
1 |
ttcaggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttg |
100 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||| ||||| || |||| || ||||| | || |||| ||||| | |||||||||||||||||||||| |
|
|
| T |
31529284 |
ttcaggtgctatagattcacctttcttaagcttagtgtcatctctaaatgcaacaatgcctcttatttggagggcggaaaaaagatgatcagtgaagttg |
31529383 |
T |
 |
| Q |
101 |
aggcgtgtatctttacctctaaagctgacaaacacgtcata |
141 |
Q |
| |
|
| ||||| ||| ||||| ||||||| |||||||||||| |
|
|
| T |
31529384 |
aatcgtgtgtctgctcctctgaagctgataaacacgtcata |
31529424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 31476344 - 31476203
Alignment:
| Q |
1 |
ttcaggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttg |
100 |
Q |
| |
|
|||||||||||||||||||||||| | || ||||| |||||||| |||| ||||| | |||| || |||||| ||||||| ||||||||| ||| |
|
|
| T |
31476344 |
ttcaggtgctatggattcacctttttgaagattagtgtcatccctaaatgcaaaaacacctttttcttcgagggcatcaaaaaggaaatcagtgaaattg |
31476245 |
T |
 |
| Q |
101 |
aggcgtgtatctttacctctaaagctgacaaacacgtcataa |
142 |
Q |
| |
|
||| ||||||| |||||| ||||| ||||||||||||||| |
|
|
| T |
31476244 |
ttgcgagtatcttcacctctgaagctcacaaacacgtcataa |
31476203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 31023534 - 31023670
Alignment:
| Q |
5 |
ggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggc |
104 |
Q |
| |
|
||||| ||||||||||||||||| ||| | | ||| ||| |||||| || || | ||||||| | | || |||||||||||||||| |||||||| || |
|
|
| T |
31023534 |
ggtgcaatggattcacctttcttgagcattgcatcgtccttgaatgcaatgataccttttcttcggaaggaagcaaaaagatgatcaatgaagttgtagc |
31023633 |
T |
 |
| Q |
105 |
gtgtatctttacctctaaagctgacaaacacgtcata |
141 |
Q |
| |
|
| || ||||||||| | ||||| |||||||||||||| |
|
|
| T |
31023634 |
gagtgtctttacctttgaagctcacaaacacgtcata |
31023670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 31496281 - 31496132
Alignment:
| Q |
4 |
aggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgagg |
103 |
Q |
| |
|
|||| |||||||||||||||| || ||||| ||||| || |||| | |||||| || ||| || | || | ||||||||||||||||||| ||| | |
|
|
| T |
31496281 |
aggtcctatggattcaccttttggaagattagtgtcatctctaaatgcagaaatgccttctctgtggaaggtatcaaaaagatgatcagtgaaattgttg |
31496182 |
T |
 |
| Q |
104 |
cgtgtatctttacctctaaagctgacaaacacgtcataataatttctcct |
153 |
Q |
| |
|
|| || || | |||||||||| |||||||||||||||||| ||| ||||| |
|
|
| T |
31496181 |
cgagtgtcctcacctctaaaggtgacaaacacgtcataatgattgctcct |
31496132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 31501448 - 31501308
Alignment:
| Q |
7 |
tgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggcgt |
106 |
Q |
| |
|
|||||||||||||||||| || ||||| |||||||| |||| || ||||| || ||| | | |||| |||||||||||| |||||| ||| ||| |
|
|
| T |
31501448 |
tgctatggattcaccttttggaagattagtgtcatccctaaatgcaagaatgccttctctgttgaaggcatcaaaaagatgataagtgaaattgttgcga |
31501349 |
T |
 |
| Q |
107 |
gtatctttacctctaaagctgacaaacacgtcataataatt |
147 |
Q |
| |
|
|| |||| ||||||||| |||||||| | ||||||||||| |
|
|
| T |
31501348 |
gtgtcttcacctctaaaagtgacaaacgcatcataataatt |
31501308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 31162413 - 31162471
Alignment:
| Q |
11 |
atggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttg |
69 |
Q |
| |
|
|||||||||||||| || ||||||| ||||||||| |||| |||||| | ||||||||| |
|
|
| T |
31162413 |
atggattcacctttgttgagcttagaatcatccctaaatgcaaaaataccttttctttg |
31162471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 31244362 - 31244241
Alignment:
| Q |
20 |
cctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggcgtgtatctttacctc |
119 |
Q |
| |
|
|||||||| ||||| |||||||||||||| | || ||||| |||| | || || | ||||||| ||||||||||| ||| |||||| || ||||| |
|
|
| T |
31244362 |
cctttcttgagctttgtatcatccctgaaggtaacaatgccttttttatggagagtgccaaaaaggtgatcagtgaaattgttgcgtgtgtcgccacctc |
31244263 |
T |
 |
| Q |
120 |
taaagctgacaaacacgtcata |
141 |
Q |
| |
|
||||||| |||||||| ||||| |
|
|
| T |
31244262 |
taaagctcacaaacacatcata |
31244241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 55; Significance: 9e-23; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 12785695 - 12785833
Alignment:
| Q |
5 |
ggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggc |
104 |
Q |
| |
|
||||||||| |||||||||| || || ||||| ||||| ||||||| | ||||| | |||||| |||||||||||||||||||| ||||| |||| || |
|
|
| T |
12785695 |
ggtgctatgaattcaccttttttaagtttagtgtcatctctgaatgcattaatgcctcgtctttgtagggcagcaaaaagatgatcggtgaaattgaagc |
12785794 |
T |
 |
| Q |
105 |
gtgtatctttacctctaaagctgacaaacacgtcataat |
143 |
Q |
| |
|
|||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
12785795 |
gtgtgtctgggcctctaaagctcacaaacacgtcataat |
12785833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 12782258 - 12782387
Alignment:
| Q |
7 |
tgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggcgt |
106 |
Q |
| |
|
||||||||| | |||||| | || ||||| ||||| ||||||| |||||| | ||||||||| |||||| ||||||||||||||||||| |||| ||| |
|
|
| T |
12782258 |
tgctatggaattacctttttgaagattagtgtcatctctgaatgtaaaaattctttttctttgaagggcaccaaaaagatgatcagtgaaattgaaacgt |
12782357 |
T |
 |
| Q |
107 |
gtatctttacctctaaagctgacaaacacg |
136 |
Q |
| |
|
|| ||| | ||||| ||||| ||||||||| |
|
|
| T |
12782358 |
gtgtctgtgcctctgaagctcacaaacacg |
12782387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 12781505 - 12781643
Alignment:
| Q |
5 |
ggtgctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggc |
104 |
Q |
| |
|
||||||||| |||| ||||| || || ||||| ||||| ||||||| | ||||| | |||||| ||||||||| ||| |||||| ||||| |||| || |
|
|
| T |
12781505 |
ggtgctatgaattcgccttttttaagtttagtgtcatctctgaatgcattaatgcctcgtctttgtagggcagcacaaaaatgatcggtgaaattgaagc |
12781604 |
T |
 |
| Q |
105 |
gtgtatctttacctctaaagctgacaaacacgtcataat |
143 |
Q |
| |
|
|||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
12781605 |
gtgtgtctgggcctctaaagctcacaaacacgtcataat |
12781643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 155
Target Start/End: Original strand, 33412747 - 33412824
Alignment:
| Q |
78 |
caaaaagatgatcagtgaagttgaggcgtgtatctttacctctaaagctgacaaacacgtcataataatttctccttg |
155 |
Q |
| |
|
||||||||| ||||||||| ||| ||| || |||| |||||| ||| |||||||||| |||||||||||||| |||| |
|
|
| T |
33412747 |
caaaaagataatcagtgaaattgttgcgagtgtcttcacctctgaaggtgacaaacacatcataataatttcttcttg |
33412824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 9169557 - 9169603
Alignment:
| Q |
115 |
acctctaaagctgacaaacacgtcataataatttctccttggagatg |
161 |
Q |
| |
|
|||||||||| ||| |||||| ||||||| ||||||||||||||||| |
|
|
| T |
9169557 |
acctctaaaggtgaaaaacacatcataatgatttctccttggagatg |
9169603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 33265688 - 33265788
Alignment:
| Q |
55 |
aatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggcgtgtatctttacctctaaagctgacaaacacgtcataataatttctcctt |
154 |
Q |
| |
|
||||| |||| |||| |||||| |||||||| ||| ||||| ||| || ||||||| |||||| ||| ||||||| || |||||||||||||| ||| |
|
|
| T |
33265688 |
aatgccttttgtttgaagggcatcaaaaagaaaatctgtgaaattgttccgagtatcttcacctctgaaggtgacaaatacatcataataatttcttctt |
33265787 |
T |
 |
| Q |
155 |
g |
155 |
Q |
| |
|
| |
|
|
| T |
33265788 |
g |
33265788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 33274832 - 33274932
Alignment:
| Q |
55 |
aatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggcgtgtatctttacctctaaagctgacaaacacgtcataataatttctcctt |
154 |
Q |
| |
|
||||| |||| |||| |||||| |||||||| ||| ||||| ||| || ||||||| |||||| ||| ||||||| || |||||||||||||| ||| |
|
|
| T |
33274832 |
aatgccttttgtttgaagggcatcaaaaagaaaatctgtgaaattgttccgagtatcttcacctctgaaggtgacaaatacatcataataatttcttctt |
33274931 |
T |
 |
| Q |
155 |
g |
155 |
Q |
| |
|
| |
|
|
| T |
33274932 |
g |
33274932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 33403409 - 33403517
Alignment:
| Q |
47 |
aatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggcgtgtatctttacctctaaagctgacaaacacgtcataataat |
146 |
Q |
| |
|
|||| |||||||| |||| ||| |||||| |||||||| ||||||||| ||| || || |||| |||||||||| ||| |||||| || ||||||| |
|
|
| T |
33403409 |
aatgcaaaaatgccttttgtttcaagggcatcaaaaagaaaatcagtgaaattgttccgagtgtcttcacctctaaaggtgataaacacatcgtaataat |
33403508 |
T |
 |
| Q |
147 |
ttctccttg |
155 |
Q |
| |
|
|||| |||| |
|
|
| T |
33403509 |
ttcttcttg |
33403517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1749 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1749
Description:
Target: scaffold1749; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 935 - 1053
Alignment:
| Q |
38 |
tcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggcgtgtatctttacctctaaagctgacaaacacgt |
137 |
Q |
| |
|
||||||||||| | | |||| | |||||||| ||||||||||||||| || |||||| ||| ||| ||||||| |||||| ||| |||||||||||| |
|
|
| T |
935 |
tcatccctgaaagcataaataccttttctttcaagggcagcaaaaagaaaattagtgaaattgttgcgagtatcttcacctctgaaggtgacaaacacgt |
1034 |
T |
 |
| Q |
138 |
cataataatttctccttgg |
156 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
1035 |
cataacaatttctccttgg |
1053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 9696 - 9814
Alignment:
| Q |
38 |
tcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggcgtgtatctttacctctaaagctgacaaacacgt |
137 |
Q |
| |
|
||||||||||| | | |||| | |||||||| ||||||||||||||| || |||||| ||| ||| ||||||| |||||| ||| |||||||||||| |
|
|
| T |
9696 |
tcatccctgaaagcataaataccttttctttcaagggcagcaaaaagaaaattagtgaaattgttgcgagtatcttcacctctgaaggtgacaaacacgt |
9795 |
T |
 |
| Q |
138 |
cataataatttctccttgg |
156 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
9796 |
cataacaatttctccttgg |
9814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 17438009 - 17437870
Alignment:
| Q |
9 |
ctatggattcacctttcttcagcttagtatcatccctgaatgaaaaaatgcattttctttgcagggcagcaaaaagatgatcagtgaagttgaggcgtgt |
108 |
Q |
| |
|
|||||||||||||||| | || ||||| ||||| | |||| ||||||| |||||||| ||||| |||||||| ||||||||| ||| ||| || |
|
|
| T |
17438009 |
ctatggattcacctttttgaagattagtgtcatctcgaaatgcaaaaatgtcttttctttcaagggcgtcaaaaagaaaatcagtgaaattgttgcgagt |
17437910 |
T |
 |
| Q |
109 |
atctttacctctaaagctgacaaacacgtcataataattt |
148 |
Q |
| |
|
||||| |||||||||| |||||||||| ||||||| |||| |
|
|
| T |
17437909 |
atcttcacctctaaaggtgacaaacacatcataatgattt |
17437870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University