View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10271_high_59 (Length: 229)
Name: NF10271_high_59
Description: NF10271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10271_high_59 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 46210334 - 46210112
Alignment:
| Q |
7 |
tcaagttcctccgtttgcacacaatccaaagaatggctacaaattgttcgctttgcaccggagtaatttggtgcaatatagtgaaaacaacagtatccat |
106 |
Q |
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| T |
46210334 |
tcaagttcctccgtttgcacacaatccaaagaatggctacaaattgttcgctttgcaccggagtaatttggtgcaatatagtgaaaacaacagtatccat |
46210235 |
T |
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| Q |
107 |
acgatacgatagtcctgacggagcactctatctattttatctgataaatttattgcacaattcatctgggagttgtcaattaagcaacttgtaagagaaa |
206 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46210234 |
acgatacgatagtcctgacgaagcactctatctattttatctgataaatttattgcacaattcatctgggagttgtcaattaagcaacttgtaagagaaa |
46210135 |
T |
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| Q |
207 |
tgatgcagaattaagcccaatgt |
229 |
Q |
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| T |
46210134 |
ttttgcagaattaagcccaatgt |
46210112 |
T |
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