View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10271_low_119 (Length: 230)
Name: NF10271_low_119
Description: NF10271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10271_low_119 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 14261404 - 14261622
Alignment:
| Q |
1 |
aatggtgaatgtgattgtgttatttatatgtgtgtattggagattgaggaagaagaggtttgagaattggatttgatttgagccgttggatttggagtaa |
100 |
Q |
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| T |
14261404 |
aatggtgaatgtgattgtgttatttatatgtgtgtattggagattgaggaagaataggtttgagaattggatttgatttgagccgttggatttggagtaa |
14261503 |
T |
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| Q |
101 |
tcgatggtttagattatgatccgtgtgaagctaagtgagagattttggaccgttgataaatatgtatgaacggttggattttgatttgtagtggatttgc |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14261504 |
tcgatggtttagattgtgatccgtgtgaagctaagtgagagattttggaccgttgataaatatgtatgaacggttggattttgatttgtagtggatttgc |
14261603 |
T |
|
| Q |
201 |
ggatcgcgctgcctttgct |
219 |
Q |
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||||||| || |||||||| |
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| T |
14261604 |
ggatcgcacttcctttgct |
14261622 |
T |
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