View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10271_low_42 (Length: 362)
Name: NF10271_low_42
Description: NF10271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10271_low_42 |
 | |
|
| [»] scaffold0200 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 98 - 348
Target Start/End: Complemental strand, 1655830 - 1655580
Alignment:
| Q |
98 |
gtactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatata |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655830 |
gtactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatata |
1655731 |
T |
|
| Q |
198 |
ccaaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaa |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655730 |
ccaaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaa |
1655631 |
T |
|
| Q |
298 |
acggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
348 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655630 |
acggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
1655580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 90 - 348
Target Start/End: Original strand, 9128364 - 9128622
Alignment:
| Q |
90 |
aaaatatagtactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaagg |
189 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9128364 |
aaaacataatactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaagg |
9128463 |
T |
|
| Q |
190 |
ctaatataccaaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaa |
289 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9128464 |
ctaatataccaaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaa |
9128563 |
T |
|
| Q |
290 |
aaactgaaacggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
348 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9128564 |
aaactgaaacggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
9128622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 99 - 348
Target Start/End: Complemental strand, 45223803 - 45223554
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45223803 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
45223704 |
T |
|
| Q |
199 |
caaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45223703 |
caaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
45223604 |
T |
|
| Q |
299 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45223603 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
45223554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 97 - 345
Target Start/End: Complemental strand, 37153488 - 37153240
Alignment:
| Q |
97 |
agtactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatat |
196 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37153488 |
agtactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagtaaaattgacttttttcatcatatttaaggctaatat |
37153389 |
T |
|
| Q |
197 |
accaaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactga |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37153388 |
accaaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactga |
37153289 |
T |
|
| Q |
297 |
aacggctctctatactcctctccctctatagtaactccacgaagcccaa |
345 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37153288 |
aacggctctctatactcctctccctctatagtaactccacgaagcccaa |
37153240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 229
Target Start/End: Original strand, 48078771 - 48078901
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
198 |
Q |
| |
|
|||| |||| ||||| |||||| ||||||||||||| |||||| |||| |||||||||||||||||||| ||||||| |||||||||||| || ||||| |
|
|
| T |
48078771 |
tacttcctctgtatcaaaatattagcaaaattcaacaatcttaactgtgtcaaaatataagcaaaattgatttttttcctcatatttaaggatagtatac |
48078870 |
T |
|
| Q |
199 |
caaaaatgcccttagtttaatactccaattt |
229 |
Q |
| |
|
|||| || ||||| ||||||||||| ||||| |
|
|
| T |
48078871 |
caaatatacccttggtttaatactctaattt |
48078901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 26651605 - 26651475
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
198 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||| |||||||||| || |||| |
|
|
| T |
26651605 |
tactccctccgtgtcaaaatataagcaaaattcaactatcttgactgtaacaaaatataagcaaatttgactttattcctcatatttaaatatagtatat |
26651506 |
T |
|
| Q |
199 |
caaaaatgcccttagtttaatactccaattt |
229 |
Q |
| |
|
|||| |||||||| |||||| ||| ||||| |
|
|
| T |
26651505 |
caaatatgcccttgctttaattctctaattt |
26651475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 39466700 - 39466733
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
39466700 |
tactccctccgtatcaaaatataagcaaaattca |
39466733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 99 - 348
Target Start/End: Original strand, 12810562 - 12810811
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12810562 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
12810661 |
T |
|
| Q |
199 |
caaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12810662 |
caaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
12810761 |
T |
|
| Q |
299 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12810762 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
12810811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 229
Target Start/End: Original strand, 43872868 - 43872998
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
198 |
Q |
| |
|
||||| |||||| || ||||||||||||||||||||||||||| ||| | | |||||||||||| ||||| || ||| | |||||||| |||||||| |
|
|
| T |
43872868 |
tactctctccgtgtcaaaatataagcaaaattcaactatcttagctgtaatagaatataagcaaatttgaccttattccttatatttaaatataatatac |
43872967 |
T |
|
| Q |
199 |
caaaaatgcccttagtttaatactccaattt |
229 |
Q |
| |
|
|||| |||||||| |||||| ||||||||| |
|
|
| T |
43872968 |
caaacatgcccttgctttaattctccaattt |
43872998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 27878838 - 27878871
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
27878838 |
tactccctccgtatcaaaatataagcaaaattca |
27878871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 27878947 - 27878914
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
27878947 |
tactccctccgtatcaaaatataagcaaaattca |
27878914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 99 - 348
Target Start/End: Complemental strand, 23781757 - 23781508
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23781757 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
23781658 |
T |
|
| Q |
199 |
caaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23781657 |
caaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
23781558 |
T |
|
| Q |
299 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23781557 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
23781508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 99 - 348
Target Start/End: Original strand, 52635186 - 52635435
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52635186 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
52635285 |
T |
|
| Q |
199 |
caaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52635286 |
caaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
52635385 |
T |
|
| Q |
299 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
348 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52635386 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
52635435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 50746513 - 50746387
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgactt---ttttcatcatatttaaggctaata |
195 |
Q |
| |
|
||||||||| || || ||||||||| ||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||| || || |
|
|
| T |
50746513 |
tactccctctgtgtcaaaatataagtaaaattcaactat-------gtaacaaaatataagcaaaattgactttttttttcctcatatttaaatatagta |
50746421 |
T |
|
| Q |
196 |
taccaaaaatgcccttagtttaatactccaattt |
229 |
Q |
| |
|
||||||| |||||||| |||||| ||||||||| |
|
|
| T |
50746420 |
taccaaatatgcccttgctttaattctccaattt |
50746387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 9135662 - 9135629
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
9135662 |
tactccctccgtatcaaaatataagcaaaattca |
9135629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 31852053 - 31852089
Alignment:
| Q |
96 |
tagtactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||| |
|
|
| T |
31852053 |
tagtactccctccgtctcaaaatataagcaaaattca |
31852089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 39151717 - 39151753
Alignment:
| Q |
96 |
tagtactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||| |
|
|
| T |
39151717 |
tagtactccctccgtttcaaaatataagcaaaattca |
39151753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 99 - 348
Target Start/End: Original strand, 3790125 - 3790374
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3790125 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
3790224 |
T |
|
| Q |
199 |
caaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3790225 |
caaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
3790324 |
T |
|
| Q |
299 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagcc |
348 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3790325 |
cggttctctatactcctctccctctatagtaactccacgaagcccaagcc |
3790374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 29007556 - 29007523
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
29007556 |
tactccctccgtatcaaaatataagcaaaattca |
29007523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 40305008 - 40305041
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
40305008 |
tactccctccgtatcaaaatataagcaaaattca |
40305041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 42666269 - 42666229
Alignment:
| Q |
91 |
aaatatagtactccctccgtatcgaaatataagcaaaattc |
131 |
Q |
| |
|
|||||| ||||||||||||| || ||||||||||||||||| |
|
|
| T |
42666269 |
aaatatcgtactccctccgtttcaaaatataagcaaaattc |
42666229 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 11030826 - 11030872
Alignment:
| Q |
17 |
atgaatgatgagtaattgcttaatgaaattggtcaaaccaaggaata |
63 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11030826 |
atgaatgatgagtagttgcttaatgaaattggtcaaaccaaggaata |
11030872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 3055783 - 3055743
Alignment:
| Q |
100 |
actccctccgtatcgaaatataagcaaaattcaactatctt |
140 |
Q |
| |
|
||||||||| | || |||||||||||||||||||||||||| |
|
|
| T |
3055783 |
actccctccatgtcaaaatataagcaaaattcaactatctt |
3055743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 28034010 - 28034044
Alignment:
| Q |
98 |
gtactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |
|
|
| T |
28034010 |
gtactccctccgtatcaaaatataagcaaaattca |
28034044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 14897043 - 14897076
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
14897043 |
tactccctccgtatcaaaatataagcaaaattca |
14897076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 8618384 - 8618426
Alignment:
| Q |
90 |
aaaatatagtactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
|||||| |||||||||||||| || |||||||||||||||||| |
|
|
| T |
8618384 |
aaaataaagtactccctccgtttcaaaatataagcaaaattca |
8618426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0200 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0200
Description:
Target: scaffold0200; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 22446 - 22413
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
22446 |
tactccctccgtatcaaaatataagcaaaattca |
22413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 16607498 - 16607465
Alignment:
| Q |
99 |
tactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
16607498 |
tactccctccgtatcaaaatataagcaaaattca |
16607465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 42605991 - 42606023
Alignment:
| Q |
100 |
actccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
42605991 |
actccctccgtttcgaaatataagcaaaattca |
42606023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 44687893 - 44687929
Alignment:
| Q |
96 |
tagtactccctccgtatcgaaatataagcaaaattca |
132 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||| |
|
|
| T |
44687893 |
tagtactccctccgtttctaaatataagcaaaattca |
44687929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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