View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10271_low_6 (Length: 571)
Name: NF10271_low_6
Description: NF10271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10271_low_6 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold0267 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 465; Significance: 0; HSPs: 40)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 5 - 533
Target Start/End: Original strand, 10579950 - 10580478
Alignment:
| Q |
5 |
gctttaacaaatcaacacaggatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagt |
104 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10579950 |
gctttaacaaatcaacacaagatggctgcaactatgattggaggtgctttcctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagt |
10580049 |
T |
|
| Q |
105 |
ttcttgattacatcaaaaacaccaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagagga |
204 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580050 |
ttcttgattacatcaaaaacactaagctcaatgtctcactcttgaggcagcttaaaacaacactgctcactcttcaagttgtgctggatgatgcagagga |
10580149 |
T |
|
| Q |
205 |
gaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattcc |
304 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10580150 |
gaagcagatcaataatcctgctgtcaaactatggcttgatgacttgaaagatgctatcattgatgctgaggacttgctcaatgaaatcagttacgattcc |
10580249 |
T |
|
| Q |
305 |
ctgcgatgcaaggtggagaatacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaatt |
404 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580250 |
ctgcgatgcaaggtggagaatacacaagctcaaaacaaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaatt |
10580349 |
T |
|
| Q |
405 |
cccagatgaagatcatgtgtgaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactcc |
504 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
10580350 |
cccagatgaagatcatgtgtgaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaagagtgctagagtttctcatggaactcc |
10580449 |
T |
|
| Q |
505 |
ttcaagttctgtggttaacggatctgtca |
533 |
Q |
| |
|
||||||||||||| |||||| |||||||| |
|
|
| T |
10580450 |
ttcaagttctgtgtttaacgaatctgtca |
10580478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 15 - 533
Target Start/End: Complemental strand, 10376555 - 10376037
Alignment:
| Q |
15 |
atcaacacaggatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgatta |
114 |
Q |
| |
|
||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10376555 |
atcaacagaagatggctgcaactatgataggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaacagagtttcttgatta |
10376456 |
T |
|
| Q |
115 |
catcaaaaacaccaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatc |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10376455 |
catcaaaaacaccaaactcaatgtctcactcttgaggcagttaaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatc |
10376356 |
T |
|
| Q |
215 |
aacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgca |
314 |
Q |
| |
|
| ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10376355 |
atcaatccttctgtcaagcaatggcttgatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgca |
10376256 |
T |
|
| Q |
315 |
aggtggagaatacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaa |
414 |
Q |
| |
|
||||||||||| || |||||||||| |||||||||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||| || ||||| |
|
|
| T |
10376255 |
aggtggagaatgcaaaagctcaaaacaaaactaatcaggtgttgaacttcctttcttctccttttaacaccttctacagagagatcaattctcaaatgaa |
10376156 |
T |
|
| Q |
415 |
gatcatgtgtgaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttct |
514 |
Q |
| |
|
| |||||||||| | ||||||||| |||||| | |||||||| | |||||| ||||||||||||||| ||||||||||| |||||| ||||||||||| |
|
|
| T |
10376155 |
ggtcatgtgtgatagcctgcaattctttgcacagtataaagatatacttggtctgcaaactaaaagtggtagagtttctcgtagaacaccttcaagttca |
10376056 |
T |
|
| Q |
515 |
gtggttaacggatctgtca |
533 |
Q |
| |
|
||||| || | |||||||| |
|
|
| T |
10376055 |
gtggtaaatgaatctgtca |
10376037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 25 - 519
Target Start/End: Complemental strand, 10434744 - 10434250
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
|||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
10434744 |
gatggctgcaactatgataggaggagcttttctctctgcaactgttcaaaccttagttgagaaacttgcttcaaaagagtttcgtgattacatcaaaaac |
10434645 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
||||| ||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10434644 |
accaagctcaatgactcactcttgaggcagctgaaaacaacacttctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaaacctg |
10434545 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
10434544 |
ctgtcaaacaatggcttgatgacttgaaagatgctgtctttgatgccgaggacttgctcaacgaaatcagttatgattcccttcgatccaaggtggagaa |
10434445 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
|||||| |||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
10434444 |
tacacatgctcaaaacaaaactaatcaggtgttgaacttcctttcatctccttttaatagtttctacagagagatcaattctcaaatgaagatcatgtgt |
10434345 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggt |
519 |
Q |
| |
|
|||| | ||||| | |||||| | |||||||| | |||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
10434344 |
gaaagcttgcaactttttgcacagaataaagatatacttggtctgcaaaccaaaagtgggagagtttctcatagaaatccttcaagttctgtggt |
10434250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 48 - 533
Target Start/End: Original strand, 10088182 - 10088667
Alignment:
| Q |
48 |
gtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaacaccaaactcaatgtctcactctt |
147 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
10088182 |
gtgcttttctctctgcaactattcagaccttggttgagaaacttgcttcaacagagtttcgtgattacatcaaaaacaccaagttgaatgtctcactctc |
10088281 |
T |
|
| Q |
148 |
gaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgac |
247 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
10088282 |
gaggcagctgaaaacaacactgctcactcttcaagttgtgctggatgatgcggaggagaagcagatcaacaatcctgctgtcaaactatggcttgatgac |
10088381 |
T |
|
| Q |
248 |
ttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaatacacaagctcaaaataaaacta |
347 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| | |
|
|
| T |
10088382 |
ttgaaagatgctgtctttgatgctgaggacttgctcagcgaaatcagttatgattcccttcgatgcaaggtggagaatgcacaagctcaaaacaaaagtt |
10088481 |
T |
|
| Q |
348 |
atcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgtgaaaacctgcaattgtttgcaaa |
447 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||||||||||||| | |
|
|
| T |
10088482 |
atcaggtgatgaacttcctttcatctccttttaatagcttctacagagagatcaattctcaaatgaagatcatgtgtgaaagcttgcaattgtttgcaca |
10088581 |
T |
|
| Q |
448 |
tcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaacggatctgtca |
533 |
Q |
| |
|
|||||||| | |||||| |||||||||||| || || ||||| |||||||||||||||||||| ||||| || | |||||||| |
|
|
| T |
10088582 |
gaataaagatatacttggtctgcaaactaaaatcgcaagggtttcacatagaactccttcaagttcggtggtaaatgaatctgtca |
10088667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 48 - 533
Target Start/End: Original strand, 10195065 - 10195550
Alignment:
| Q |
48 |
gtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaacaccaaactcaatgtctcactctt |
147 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
10195065 |
gtgcttttctctctgcaactattcagaccttggttgagaaacttgcttcaacagagtttcgtgattacatcaaaaacaccaagttgaatgtctcactctt |
10195164 |
T |
|
| Q |
148 |
gaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgac |
247 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
10195165 |
gaggcagctgaaaacaacactgctcactcttcaagttgtgctggatgatgcggaggagaagcagatcaacaatcctgctgtcaaactatggcttgatgac |
10195264 |
T |
|
| Q |
248 |
ttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaatacacaagctcaaaataaaacta |
347 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| | |
|
|
| T |
10195265 |
ttgaaagatgctgtctttgatgctgaggacttgttcagcgaaatcagttatgattcccttcgatgcaaggtggagaatgcacaagctcaaaacaaaagtt |
10195364 |
T |
|
| Q |
348 |
atcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgtgaaaacctgcaattgtttgcaaa |
447 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||||||||||||| | |
|
|
| T |
10195365 |
atcaggtgatgaacttcctttcatctccttttaatagcttctacagagagatcaattctcaaatgaagatcatgtgtgaaagcttgcaattgtttgcaca |
10195464 |
T |
|
| Q |
448 |
tcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaacggatctgtca |
533 |
Q |
| |
|
|||||||| | |||||| |||||||||||| || || ||||| |||||||||||||||||||| ||||| || | |||||||| |
|
|
| T |
10195465 |
gaataaagatatacttggtctgcaaactaaaaacgcaagggtttcacatagaactccttcaagttcagtggtaaatgaatctgtca |
10195550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 5 - 533
Target Start/End: Complemental strand, 10364519 - 10363990
Alignment:
| Q |
5 |
gctttaacaa-atcaacacaggatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgag |
103 |
Q |
| |
|
|||||||||| ||||||| | |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10364519 |
gctttaacaatatcaacagaagatggctgcaactatgataggaggagcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaacagag |
10364420 |
T |
|
| Q |
104 |
tttcttgattacatcaaaaacaccaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagagg |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
10364419 |
tttcttgattacatcaaaaacaccaaactcaatgactcactcttgaggcagttacaaacaacactgctcactcttcaagttgtgctggatgacgcagaag |
10364320 |
T |
|
| Q |
204 |
agaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattc |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||| ||||| | ||||||||||||||||| |
|
|
| T |
10364319 |
agaagcagatcaacaatcctgctgtcaaacaatggcttgatggcttgaaagatgctgtctttgatgccgaggatttgcttcacgaaatcagttatgattc |
10364220 |
T |
|
| Q |
304 |
cctgcgatgcaaggtggagaatacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaat |
403 |
Q |
| |
|
||||||||||| |||||| || ||||||| ||| | || ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
10364219 |
cctgcgatgcacaatggagagtaaacaagctggaaacagaagtaatcaggtgtggaacttccttttatctcctttcaatagcttctatagagagatcaat |
10364120 |
T |
|
| Q |
404 |
tcccagatgaagatcatgtgtgaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactc |
503 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||| ||| |||||| | ||| |||||||||||||||| | || ||||| | |||||| | |
|
|
| T |
10364119 |
tcccagatgaagatcatgtgtgaaagcctgcaacattttgaaaagagaaaagatatacttcgtttgcaaactaaaagcacaagggtttcacgtagaacac |
10364020 |
T |
|
| Q |
504 |
cttcaagttctgtggttaacggatctgtca |
533 |
Q |
| |
|
|||||||||| ||||| || | |||||||| |
|
|
| T |
10364019 |
cttcaagttcagtggtaaatgaatctgtca |
10363990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 15 - 513
Target Start/End: Original strand, 9838220 - 9838718
Alignment:
| Q |
15 |
atcaacacaggatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgatta |
114 |
Q |
| |
|
||||||| | |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9838220 |
atcaacagaagatggctgcaactatgattggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgatta |
9838319 |
T |
|
| Q |
115 |
catcaaaaacaccaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatc |
214 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||| | || |||| |||||| |||||| | ||| || |||||||||||||||||||||||| |
|
|
| T |
9838320 |
catcaaaaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatc |
9838419 |
T |
|
| Q |
215 |
aacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgca |
314 |
Q |
| |
|
| |||||| ||||||||| |||||| || |||||||||||| | |||||||||||||||| |||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
9838420 |
agcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgca |
9838519 |
T |
|
| Q |
315 |
aggtggagaatacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaa |
414 |
Q |
| |
|
||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || | ||||||||||||||||||||| |
|
|
| T |
9838520 |
aggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttcttctccttttaatagtttttacaaagagatcaattcccagatgaa |
9838619 |
T |
|
| Q |
415 |
gatcatgtgtgaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttc |
513 |
Q |
| |
|
|||||||||||| | | ||||| | | |||| | |||||||| | |||||||||||||||||||||||||||||||||| |||||| ||||| ||||| |
|
|
| T |
9838620 |
gatcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttc |
9838718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 15 - 513
Target Start/End: Original strand, 9849098 - 9849596
Alignment:
| Q |
15 |
atcaacacaggatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgatta |
114 |
Q |
| |
|
||||||| | |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9849098 |
atcaacagaagatggctgcaactatgattggaggcgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcgtgatta |
9849197 |
T |
|
| Q |
115 |
catcaaaaacaccaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatc |
214 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||| | || |||| |||||| |||||| | ||| || |||||||||||||||||||||||| |
|
|
| T |
9849198 |
catcaaaaacactaagctcaatgtctcactcttgaggcagttacaagcaaccatgctcaatcttcaggctgttctagatgatgcagaggagaagcagatc |
9849297 |
T |
|
| Q |
215 |
aacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgca |
314 |
Q |
| |
|
| |||||| ||||||||| |||||| || |||||||||||| | |||||||||||||||| |||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
9849298 |
agcaatccccatgtcaaacagtggcttgataacttgaaagatgttgtctttgatgctgaggatttgctcaacgaaatcagttacgattccctgcgatgca |
9849397 |
T |
|
| Q |
315 |
aggtggagaatacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaa |
414 |
Q |
| |
|
||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || | ||||||||||||||||||||| |
|
|
| T |
9849398 |
aggtggagaatgcaaaagctcaaaacaaaactaatcaggtgtggaacttcctttcttctccttttaatagtttttacaaagagatcaattcccagatgaa |
9849497 |
T |
|
| Q |
415 |
gatcatgtgtgaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttc |
513 |
Q |
| |
|
|||||||||||| | | ||||| | | |||| | |||||||| | |||||||||||||||||||||||||||||||||| |||||| ||||| ||||| |
|
|
| T |
9849498 |
gatcatgtgtgatagcttgcaactttatgcacagaataaagatatacttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttctagttc |
9849596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 25 - 519
Target Start/End: Original strand, 10076635 - 10077132
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10076635 |
gatggctgcaactatgataggaggtgcttttctccatgcaactgttcagaccttagttgagaaacttacttcaactgagtttcttgattacatcaaaaac |
10076734 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
|| || || ||||| |||||||| || ||| | ||||||| |||||| |||||| | ||| || ||||||||||||||||||||||||| |||||| |
|
|
| T |
10076735 |
acaaatctgaatgtatcactcttcagacagttacaaacaaccatgctcaatcttcaggctgtactagatgatgcagaggagaagcagatcagcaatcccc |
10076834 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
||||| ||| |||||| || |||||||||||||| |||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
10076835 |
atgtcagacagtggcttgataacttgaaagatgctgtctttgatgccgaggacttgctcaacgaaatcagttacgattcactgcgatgcaaggtggagaa |
10076934 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
| ||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| | |||||||||||| || | ||||||||||||| |
|
|
| T |
10076935 |
tgcacaagctcaaaacaaaactaatcaggtgttgaacttcctttcatctccttttaatagcttctacaaagagatcaattctcaaacgaagatcatgtgt |
10077034 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagag---tttctcatagaactccttcaagttctgtggt |
519 |
Q |
| |
|
|||| |||||||||||||| | |||||||||| |||||| |||||||||||| |||||||| |||||| |||||| ||||||||||| ||||| |
|
|
| T |
10077035 |
gaaaggttgcaattgtttgcacagaataaagatgtacttggtctgcaaactaaaattgctagagtaatttctcgtagaacaccttcaagttcagtggt |
10077132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 25 - 533
Target Start/End: Original strand, 11768603 - 11769111
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
|||||| ||||||| ||| ||||| ||||||||||| |||||| | || ||||| ||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11768603 |
gatggcggcaactatgataggaggcgcttttctctcggcaactatgcaaaccttgtttgagaaacttgcttcaacagagtttcttgattacatcaaaaac |
11768702 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
||||| || |||||||||||||||||||| | |||||||| |||||||| ||||| | ||| ||||||||||| |||||||||||||| ||||||| || |
|
|
| T |
11768703 |
accaagctgaatgtctcactcttgaggcaattaaaaacaaccctgctcacacttcaggctgtactggatgatgcggaggagaagcagatgaacaatcttg |
11768802 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||| || |||| |||||||| ||||| ||||||||| ||||||| |
|
|
| T |
11768803 |
ctgtcaaacaatggcttgatgacttgaaagacgctatctttgatgctgaggatttactcgatcaaataagttatgactccctccgatgcaagatggagaa |
11768902 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
| ||||||| ||| ||||||||||||||||||||||| ||||| || |||||||| | | ||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
11768903 |
gaaacaagctagaaacaaaactaatcaggtgtggaacttactttcatccccttttaaaaacatctatggagagatcaattcccatatgaagatcatgtgt |
11769002 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaacg |
524 |
Q |
| |
|
|||| ||||||| | |||||| | |||||||| | | ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| || | |
|
|
| T |
11769003 |
gaaagcctgcaactttttgcacaaaataaagatatattaggtttgcaaactaaaagtgctagagtttctcgtagaacaccttcaagttcagtggtaaatg |
11769102 |
T |
|
| Q |
525 |
gatctgtca |
533 |
Q |
| |
|
|||||||| |
|
|
| T |
11769103 |
aatctgtca |
11769111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 25 - 522
Target Start/End: Complemental strand, 11149554 - 11149057
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
||||||||||||| | |||||||||| ||||||||||| |||| || | | | |||| |||| ||||||||||||||| ||||| |||||| ||| |
|
|
| T |
11149554 |
gatggctgcaactttggttggaggtgcatttctctctgcttctgtccaaagcatgcttgaccaactaacttcaactgagtttcgtgatttcatcaacaac |
11149455 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
| || || |||||||||||||||| |||| | ||||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
11149454 |
aaaaagctgaatgtctcactcttgaagcagttacaaacaacactgctggttcttcaagctgtgctggatgatgctgatgagaagcagatcaacaatcctg |
11149355 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||| ||| |||| |||||||| || |||||||||||||||||||| |
|
|
| T |
11149354 |
ctgtcaaacaatggcttgatgacttgaaagatgctatctttgatgccgaggatttgctgaatcaaattagttatgaatcactgcgatgcaaggtggagaa |
11149255 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
||||||| | ||| ||||||| ||||||||||| ||||||||||||||||||||| | | |||| ||||||||||||||||| ||||||| ||||||| |
|
|
| T |
11149254 |
tacacaatccacaaacaaaactagtcaggtgtggagcttcctttcttctccttttaacaccatctacagagagatcaattcccaaatgaagaccatgtgt |
11149155 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaa |
522 |
Q |
| |
|
|| ||||||||| | |||||| | | |||||| ||||||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||| |
|
|
| T |
11149154 |
gacaacctgcaaatttttgcacaaaacaaagatatccttggtttgcaaactaaaagtgctagaattttccatagaacaccttctagttctgtggttaa |
11149057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 25 - 533
Target Start/End: Original strand, 8860655 - 8861163
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
|||||| |||||| | |||||||||| ||||||||||| |||| || ||| | |||| |||| ||||||| ||||||| ||||| |||||| ||| |
|
|
| T |
8860655 |
gatggcagcaactttggttggaggtgcatttctctctgcttctgtccaaaccatgcttgaccaactaacttcaaccgagtttcgtgatttcatcaacaac |
8860754 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
| || || || ||||||||||||| |||| | || |||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
8860755 |
agaaagctgaacgtctcactcttgaagcagttacaagcaacgctgctggttcttcaagctgtgctggatgatgcagaggagaagcagatcaacaatcgtg |
8860854 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| | ||||||||||||||| | |
|
|
| T |
8860855 |
ctgtcaaacaatggcttgatgacttgaaagatgctctctttgatgctgaggatttgctcaaccaaatcagttatgattcattacgatgcaaggtggagga |
8860954 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
8860955 |
tacacaagctgcaaacaaaactaatcaggtgtggaacttcctttcttctccttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgt |
8861054 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaacg |
524 |
Q |
| |
|
|| | | ||||| | || ||| | ||||||||| ||||||||||||||||||||| || || |||||||| |||||| ||||||||||| || ||||| | |
|
|
| T |
8861055 |
gatagcttgcaaattttcgcacaacataaagatatccttggtttgcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatg |
8861154 |
T |
|
| Q |
525 |
gatctgtca |
533 |
Q |
| |
|
|||||||| |
|
|
| T |
8861155 |
aatctgtca |
8861163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 25 - 522
Target Start/End: Complemental strand, 11131726 - 11131229
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
|||||| |||||| | |||||||||| ||||||||||| |||| || ||| | |||| ||||| ||||||||||||||| ||||| |||||| ||| |
|
|
| T |
11131726 |
gatggcagcaactttggttggaggtgcatttctctctgcttctgtccaaaccatgcttgacaaactaacttcaactgagtttcgtgatttcatcaacaac |
11131627 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
| || || |||||||||||||||| |||| | ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||| | || |
|
|
| T |
11131626 |
aaaaagctgaatgtctcactcttgaagcagttacaaacaacactgctggttcttcaagctgtgctggatgatgctgaggagaagcagatcaacaaccgtg |
11131527 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
|||||||| ||||| || |||||||||||||||||||||||||||| ||||| ||||| ||| |||| |||||||| || |||||||||||||||||||| |
|
|
| T |
11131526 |
ctgtcaaaaaatgggttgatgacttgaaagatgctatctttgatgcggaggatttgctgaatcaaattagttatgagtcactgcgatgcaaggtggagaa |
11131427 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
|||||||||| ||| |||||||||||||| |||||||||||||||||||||||||| | | ||||| |||||||||||||||| || |||| ||||||| |
|
|
| T |
11131426 |
tacacaagctgcaaacaaaactaatcaggtctggaacttcctttcttctccttttaaaaacatctatggagagatcaattcccaaattaagaccatgtgt |
11131327 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaa |
522 |
Q |
| |
|
|| ||||||||| | |||||| | | |||||| |||||||||| |||||||||||||||||| ||| |||||||| ||||| |||||||||||||| |
|
|
| T |
11131326 |
gacaacctgcaaatttttgcacaaaacaaagatatccttggtttacaaactaaaagtgctagaattttccatagaacaccttctagttctgtggttaa |
11131229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 25 - 533
Target Start/End: Original strand, 10888675 - 10889183
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
|||||| |||||| | |||||||||| ||||||||||| |||| || ||| | |||| |||| ||||||||||||||| ||||| |||||| ||| |
|
|
| T |
10888675 |
gatggcagcaactttggttggaggtgcatttctctctgcttctgtccaaaccatgcttgaccaactaacttcaactgagtttcgtgatttcatcaacaac |
10888774 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
| || || |||||||||||||||| |||| | ||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||| | || |
|
|
| T |
10888775 |
aaaaagctgaatgtctcactcttgaagcagttacaaacaacgctgctggttcttcaagctgtgctggatgatgctgaggagaagcagatcaacaaccgtg |
10888874 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||| || |||| |||||||| || ||||||||||||||||||| |
|
|
| T |
10888875 |
ctgtcaaacaatggcttgatgacttgaaagatgctgtctttgatgcggaggatttgctgaaccaaattagttatgaatcattgcgatgcaaggtggagaa |
10888974 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
||||||| | ||| ||||||| ||||||||||| ||||||||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
10888975 |
tacacaatccacaaacaaaactagtcaggtgtggagcttcctttcttctccttttaacaccttctacagagagatcaattcccaaatgaagatcatgtgt |
10889074 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaacg |
524 |
Q |
| |
|
| | | ||||| | |||||| | ||||||||| ||||||||||||||||||||| || || |||||||| |||||| ||||||||||| || ||||| | |
|
|
| T |
10889075 |
aatagcttgcaactttttgcacaacataaagatatccttggtttgcaaactaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatg |
10889174 |
T |
|
| Q |
525 |
gatctgtca |
533 |
Q |
| |
|
|||||||| |
|
|
| T |
10889175 |
aatctgtca |
10889183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 29 - 533
Target Start/End: Complemental strand, 11160713 - 11160209
Alignment:
| Q |
29 |
gctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaacacca |
128 |
Q |
| |
|
||||||||| | |||||||||| ||||| ||||| ||||||| ||| || |||| ||||| ||||||| ||||||| ||||| |||||| || | | |
|
|
| T |
11160713 |
gctgcaactttggttggaggtgcatttctatctgcttctgttcaaaccatacttgacaaactatcttcaaccgagtttcgtgatttcatcaacaataaga |
11160614 |
T |
|
| Q |
129 |
aactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgt |
228 |
Q |
| |
|
| | |||||||||||||||| |||| | ||||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||||| | |||||| |
|
|
| T |
11160613 |
agttgaatgtctcactcttgaagcagttacaaacaacgttgctggttctacaagctgtgctggatgatgcagaggagaagtagatcaacaaccgtgctgt |
11160514 |
T |
|
| Q |
229 |
caaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaataca |
328 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||||| ||||| ||||| ||| |||| |||||||| || |||||||||||||||||||||||| |
|
|
| T |
11160513 |
caaacaatggcttgatgacttgaaagatgctgtctttgatgccgaggatttgctgaatcaaattagttatgaatcactgcgatgcaaggtggagaataca |
11160414 |
T |
|
| Q |
329 |
caagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgtgaaa |
428 |
Q |
| |
|
||| | ||| ||||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
11160413 |
caatccacaaacaaaactagtcaggtgtggagcttcctttcttctccttttaacaccttctatagagagatcaattcccaaatgaagatcatgtgtgata |
11160314 |
T |
|
| Q |
429 |
acctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaacggatc |
528 |
Q |
| |
|
| ||||| | || ||| | ||||||||| ||||||||||||||| ||||| || || |||||||| |||||| ||||||||||| || ||||| | ||| |
|
|
| T |
11160313 |
gcttgcaacttttcgcacaacataaagatatccttggtttgcaaagtaaaattggtaaagtttctcgtagaaccccttcaagttcagtagttaatgcatc |
11160214 |
T |
|
| Q |
529 |
tgtca |
533 |
Q |
| |
|
||||| |
|
|
| T |
11160213 |
tgtca |
11160209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 25 - 513
Target Start/End: Original strand, 13332273 - 13332761
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
||||||||||||| | | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||| |||| |
|
|
| T |
13332273 |
gatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgagaaacttgcttcacaagagttttgtgattacatcagaaac |
13332372 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
||||| || ||| |||||| ||| || | |||||||||||||| ||||||| | ||||||||||||||||| ||||||| |||| ||| ||| |
|
|
| T |
13332373 |
accaagctgaattcctcactgttggcagagttggaaacaacactgctcgctcttcaggcggtgctggatgatgcagaacagaagcaaatcaccaacactg |
13332472 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
|||||||||||||| | || | |||||||||| |||| |||||||||||| ||||| || |||||| ||| || ||||||||||| ||||||||||| |
|
|
| T |
13332473 |
ctgtcaaacaatggttggatcagctgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctgcgatgtaaggtggagaa |
13332572 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
| ||||||| |||| | ||||||||||| |||||| || |||| ||||||||||| | ||||| ||||||||||||| || |||||||| |||||| |
|
|
| T |
13332573 |
gaaacaagctgaaaacatgactaatcaggtttggaacctcttttcgtctccttttaaaaatctctatggagagatcaattcacaaatgaagattatgtgt |
13332672 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttc |
513 |
Q |
| |
|
||| |||||| | |||||| | || | |||| | ||||| ||||||||| || || |||||||||| |||||| ||||||||||| |
|
|
| T |
13332673 |
caaaggctgcaactttttgcacaacagagagatattcttggcttgcaaactgtgagcgcgagagtttctcttagaacgccttcaagttc |
13332761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 25 - 513
Target Start/End: Original strand, 13160349 - 13160837
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
||||||||||||| | | ||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||| ||||||||||| |||| |
|
|
| T |
13160349 |
gatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgcgaaacttgcttcacaagagttttgtgattacatcagaaac |
13160448 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
||||| || ||| |||||| ||| || | |||||||||||||| ||||||| || ||||||||||||||||| |||||| |||| ||| ||| |
|
|
| T |
13160449 |
accaagctgaattcctcactgttggcagagttggaaacaacactgctcgctcttcaggtggtgctggatgatgcagaactgaagcaaatcaccaacactg |
13160548 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
|||||||||||||| | || | |||||||||| |||| |||||||||||| ||||| || |||||| ||| || ||||||||||| | ||||||||| |
|
|
| T |
13160549 |
ctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctgcgatgtacggtggagaa |
13160648 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
| ||||||| |||| | ||||||||||| |||||| || |||| ||||||||||| | ||||| ||||||||||||| || |||||||| |||||| |
|
|
| T |
13160649 |
gaaacaagctgaaaacatgactaatcaggtttggaacctcttttcatctccttttaaaaatctctatggagagatcaattcacaaatgaagattatgtgt |
13160748 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttc |
513 |
Q |
| |
|
||| |||||| | |||||| | || | |||| ||||||| ||||||||| || || |||||||||| ||||| ||||||||||| |
|
|
| T |
13160749 |
caaaggctgcaactttttgcacaacaaagagatatccttggcttgcaaactgtgagcgcgagagtttctctaagaacgccttcaagttc |
13160837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 26 - 513
Target Start/End: Original strand, 13289035 - 13289522
Alignment:
| Q |
26 |
atggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaaca |
125 |
Q |
| |
|
|||||||||||| | | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||| ||||| |
|
|
| T |
13289035 |
atggctgcaactttggtgggaggagcttttctctctgctactgttcagactttagttgagaaacttgcttcacaagagttttgtgattacatcagaaaca |
13289134 |
T |
|
| Q |
126 |
ccaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgc |
225 |
Q |
| |
|
||| || ||| |||||||||| || | |||||||||| ||| ||||||| || ||||||||||||||||| |||||| |||| ||| |||| |
|
|
| T |
13289135 |
acaagctgaattcctcactcttggcagagttggaaacaacactactcgctcttcaggtggtgctggatgatgcagaactgaagcaaatcaccaacactgc |
13289234 |
T |
|
| Q |
226 |
tgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaat |
325 |
Q |
| |
|
||||||||||||| | || | |||||||||| |||| |||||||||||| ||||| || |||||| ||| || ||||||||||| ||||||||||| |
|
|
| T |
13289235 |
tgtcaaacaatggttggatcagctgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctgcgatgtaaggtggagaag |
13289334 |
T |
|
| Q |
326 |
acacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgtg |
425 |
Q |
| |
|
| ||||||| |||| | ||||||||||| |||||| || |||| ||||||||||| | ||||| ||||||||||||| || |||||||| |||||| |
|
|
| T |
13289335 |
aaacaagctgaaaacatgactaatcaggtttggaacctcttttcatctccttttaaaactctctatggagagatcaattcacaaatgaagattatgtgtc |
13289434 |
T |
|
| Q |
426 |
aaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttc |
513 |
Q |
| |
|
||| ||||| | |||||| | || | |||| ||||||| ||||||||| || | |||||||||| |||||| ||||||||||| |
|
|
| T |
13289435 |
aaaggctgcagctttttgcacaacagagagatatccttggcttgcaaactgtgagagggagagtttctcttagaacgccttcaagttc |
13289522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 25 - 513
Target Start/End: Original strand, 13170400 - 13170888
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
||||||||||||| | | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||| |||| |
|
|
| T |
13170400 |
gatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgagaaacttgcttcacaagagttttgtgattacatcagaaac |
13170499 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
||||| || ||| |||||| ||| || | |||||||||||||| ||||||| | || || ||||||||||| ||||||| |||| ||| ||| |
|
|
| T |
13170500 |
accaagctgaattcctcactgttggcagagttggaaacaacactgctcgctcttcaggcggttcttgatgatgcagaacagaagcaaatcaccaacactg |
13170599 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
|||||||||||||| | || | |||||||||| |||| |||||||||||| ||||| || |||||| ||| || ||||| ||||| ||||||||||| |
|
|
| T |
13170600 |
ctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctccgatgtaaggtggagaa |
13170699 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
| |||| || |||| | ||||||||||| |||||| || |||| | ||||||||| | ||||| ||||||||||||| || |||||||| |||||| |
|
|
| T |
13170700 |
gatacaatctgaaaacatgactaatcaggtttggaacctcttttcatgtccttttaaaaatctctatggagagatcaattcacaaatgaagattatgtgt |
13170799 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttc |
513 |
Q |
| |
|
||| |||||| | |||||| | || | |||| ||||||| ||||||||| || | |||||||||| ||||| ||||||||||| |
|
|
| T |
13170800 |
caaaggctgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtttctctaagaacgccttcaagttc |
13170888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 26 - 513
Target Start/End: Original strand, 13343459 - 13343946
Alignment:
| Q |
26 |
atggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaaca |
125 |
Q |
| |
|
|||||||||||| | | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||| | ||||| |
|
|
| T |
13343459 |
atggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgagaaacttgcttcacaagagttttgtgattacataagaaaca |
13343558 |
T |
|
| Q |
126 |
ccaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgc |
225 |
Q |
| |
|
|||| || ||| ||| || || || | |||||||||||||| ||||||| | ||||||||||||||||| | ||||| |||| ||| |||| |
|
|
| T |
13343559 |
ccaagctgaattcctcgctgtttgcagagttggaaacaacactgctcgctcttcaggcggtgctggatgatgcagaacataagcaaatcaccaacactgc |
13343658 |
T |
|
| Q |
226 |
tgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaat |
325 |
Q |
| |
|
||||||||||||| | || | |||||||||| |||| |||||||||||| ||||| || |||||| || || ||||||||||| | ||||||||| |
|
|
| T |
13343659 |
tgtcaaacaatggttggatcagctgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaactacgactccctgcgatgtacggtggagaag |
13343758 |
T |
|
| Q |
326 |
acacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgtg |
425 |
Q |
| |
|
| ||||||| |||| | ||||||||||| |||||| || |||| ||||| ||||| | ||||| ||||||||||||| || |||||||| |||||| |
|
|
| T |
13343759 |
aaacaagctgaaaacatgactaatcaggtttggaacctcttttcgtctccgtttaaaaatctctatggagagatcaattcacaaatgaagattatgtgtc |
13343858 |
T |
|
| Q |
426 |
aaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttc |
513 |
Q |
| |
|
||| ||||| | |||||| | || | |||| ||||||| ||||||||| || | |||||||||| ||||| ||||||||||| |
|
|
| T |
13343859 |
aaaggctgcagatttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtttctctaagaacaccttcaagttc |
13343946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 10505134 - 10505250
Alignment:
| Q |
5 |
gctttaacaaatcaacacaggatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagt |
104 |
Q |
| |
|
||||||||||||||||| | |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
10505134 |
gctttaacaaatcaacagaagatggctgcaactatgataggaggaacttttctctctgcaactgttcagaccttagttgacaaacttgcttcaacagagt |
10505233 |
T |
|
| Q |
105 |
ttcttgattacatcaaa |
121 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
10505234 |
ttcgtgattacatcaaa |
10505250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 10516990 - 10517114
Alignment:
| Q |
158 |
aaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatg |
257 |
Q |
| |
|
|||||||||||| | ||||||||| |||||||| |||||||||| |||| ||| |||| ||| | ||||||||||||||||| ||||||||||||||| |
|
|
| T |
10516990 |
aaaacaacactgtttgctcttcaagctgtgctggttgatgcagagcagaaacagttcaatgatcttcctgtcaaacaatggcttgatgacttgaaagatg |
10517089 |
T |
|
| Q |
258 |
ctatctttgatgctgaggacttgct |
282 |
Q |
| |
|
| ||||||||| |||| || ||||| |
|
|
| T |
10517090 |
caatctttgattctgaagatttgct |
10517114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 11782546 - 11782422
Alignment:
| Q |
158 |
aaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatg |
257 |
Q |
| |
|
|||||||||||| | ||||||||| |||||||| |||||||||| |||| ||| |||| ||| | ||||||||||||||||| ||||||||||||||| |
|
|
| T |
11782546 |
aaaacaacactgtttgctcttcaagctgtgctggttgatgcagagcagaaacagttcaaagatcttcctgtcaaacaatggcttgatgacttgaaagatg |
11782447 |
T |
|
| Q |
258 |
ctatctttgatgctgaggacttgct |
282 |
Q |
| |
|
| || ||||||||||| || ||||| |
|
|
| T |
11782446 |
caatatttgatgctgaagatttgct |
11782422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 10084150 - 10084218
Alignment:
| Q |
86 |
aaacttgcttcaactgagtttcttgattacatcaaaaacaccaaactcaatgtctcactcttgaggcag |
154 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
10084150 |
aaacttgcttcaacagattttcttgattacatcaaaaacaccaagccaaatgtctcactcttgaggcag |
10084218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 10191073 - 10191138
Alignment:
| Q |
86 |
aaacttgcttcaactgagtttcttgattacatcaaaaacaccaaactcaatgtctcactcttgagg |
151 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
10191073 |
aaacttgcttcaacagattttcttgattacatcaaaaacaccaagccaaatgtctcactcttgagg |
10191138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 10085611 - 10085735
Alignment:
| Q |
159 |
aaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgc |
258 |
Q |
| |
|
||||||| |||||| |||||| | ||| || ||||||||| ||||||||||||||| ||||| ||||||||| |||||| || |||||||||||| |
|
|
| T |
10085611 |
aaacaaccatgctcaatcttcaggctgtactagatgatgcaaaggagaagcagatcagtaatccccatgtcaaacagtggcttgataacttgaaagatgt |
10085710 |
T |
|
| Q |
259 |
tatctttgatgctgaggacttgctc |
283 |
Q |
| |
|
| ||||||||||||| || |||||| |
|
|
| T |
10085711 |
tttctttgatgctgaagatttgctc |
10085735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 10192531 - 10192655
Alignment:
| Q |
159 |
aaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgc |
258 |
Q |
| |
|
||||||| |||||| |||||| | ||| || ||||||||| ||||||||||||||| ||||| ||||||||| |||||| || |||||||||||| |
|
|
| T |
10192531 |
aaacaaccatgctcaatcttcaggctgtactagatgatgcaaaggagaagcagatcagtaatccccatgtcaaacagtggcttgataacttgaaagatgt |
10192630 |
T |
|
| Q |
259 |
tatctttgatgctgaggacttgctc |
283 |
Q |
| |
|
| ||||||||||||| || |||||| |
|
|
| T |
10192631 |
tttctttgatgctgaagatttgctc |
10192655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 282
Target Start/End: Original strand, 10526877 - 10526985
Alignment:
| Q |
174 |
ctcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctga |
273 |
Q |
| |
|
||||||||| |||||||| |||||||||| |||| ||| ||| | | | ||||||||||||||||| |||||||||||||||| || ||||||||||| |
|
|
| T |
10526877 |
ctcttcaagctgtgctggttgatgcagagcagaaacagttcactgaccttcctgtcaaacaatggcttcatgacttgaaagatgcaatatttgatgctga |
10526976 |
T |
|
| Q |
274 |
ggacttgct |
282 |
Q |
| |
|
|| ||||| |
|
|
| T |
10526977 |
agatttgct |
10526985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 10126433 - 10126594
Alignment:
| Q |
173 |
actcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctg |
272 |
Q |
| |
|
|||||| | ||||| || |||||||||||||||||||||||| ||| || ||||||||||||| || || |||||||| |||| |||||||| |
|
|
| T |
10126433 |
actcttgaggttgtactagatgatgcagaggagaagcagatcctcaaacccagaatcaaacaatggctggatcggttaaaagatgcaatctatgatgctg |
10126532 |
T |
|
| Q |
273 |
aggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaatacacaagct |
334 |
Q |
| |
|
|||| ||||||||| ||||||| || || |||| ||||||||| ||||||| | ||||||| |
|
|
| T |
10126533 |
aggatttgctcaatcaaatcagctacaatgccctacgatgcaagctggagaagaaacaagct |
10126594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 174 - 282
Target Start/End: Original strand, 10541492 - 10541600
Alignment:
| Q |
174 |
ctcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctga |
273 |
Q |
| |
|
|||||||| |||||||| |||||||||| |||| ||| ||| | | | ||||||| ||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
10541492 |
ctcttcaatctgtgctggttgatgcagagcagaaacagttcattgaccttcctgtcaagcaatggcttgatgacttgaaagatgcaatctttgatgctga |
10541591 |
T |
|
| Q |
274 |
ggacttgct |
282 |
Q |
| |
|
|| ||||| |
|
|
| T |
10541592 |
agatttgct |
10541600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 10260203 - 10260364
Alignment:
| Q |
173 |
actcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctg |
272 |
Q |
| |
|
|||||| | ||||| || |||||||||||||||||||||||| ||| || ||||||||||| | || || |||||||| |||| |||||||| |
|
|
| T |
10260203 |
actcttgaggttgtactagatgatgcagaggagaagcagatcctcaaacccagaatcaaacaatggttggatcggttaaaagatgcaatctatgatgctg |
10260302 |
T |
|
| Q |
273 |
aggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaatacacaagct |
334 |
Q |
| |
|
|||| ||||||||| ||||||| || || |||| ||||||||| ||||||| | ||||||| |
|
|
| T |
10260303 |
aggatttgctcaataaaatcagctacaatgccctacgatgcaagctggagaagaaacaagct |
10260364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 3884670 - 3884757
Alignment:
| Q |
153 |
agctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggct |
240 |
Q |
| |
|
|||| |||| ||||||| | | |||||||| |||| || ||||||| ||||||||||| |||| ||| |||||||||||| ||||||| |
|
|
| T |
3884670 |
agctgaaaataacactgttaagtcttcaagctgtgttgaatgatgctgaggagaagcaaatcaccaaccctgctgtcaaagaatggct |
3884757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 10500146 - 10500204
Alignment:
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctc |
283 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | |||||||||||||| || |||||| |
|
|
| T |
10500146 |
ctgtcaaacaatggcttgatgacttgaaagacacaatctttgatgctgaagatttgctc |
10500204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 4080970 - 4080909
Alignment:
| Q |
179 |
caagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggct |
240 |
Q |
| |
|
|||| ||| ||| ||||||| |||||||||||||||| ||| ||||||||||| |||||||| |
|
|
| T |
4080970 |
caagctgtactgaatgatgctgaggagaagcagatcaccaaccctgctgtcaagcaatggct |
4080909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 10031508 - 10031669
Alignment:
| Q |
173 |
actcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctg |
272 |
Q |
| |
|
|||||| | ||||| || |||||||||||||||||||||||| ||| || ||||||||||| | || || |||||||| |||| |||||||| |
|
|
| T |
10031508 |
actcttgaggttgtactagatgatgcagaggagaagcagatcctcaaacccagaatcaaacaatggttggatcggttaaaagatgcaatctatgatgctg |
10031607 |
T |
|
| Q |
273 |
aggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaatacacaagct |
334 |
Q |
| |
|
|||| ||||||||| ||||||| || || || | ||||||||| ||||||| | ||||||| |
|
|
| T |
10031608 |
aggatttgctcaatcaaatcagctacaatgccatacgatgcaagctggagaagaaacaagct |
10031669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 4115853 - 4115785
Alignment:
| Q |
163 |
aacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaa |
231 |
Q |
| |
|
||||||||| | |||||||| ||| ||| ||||||| |||||||| ||||||| |||||||||||||| |
|
|
| T |
4115853 |
aacactgctgagtcttcaagctgtactgaatgatgctgaggagaaacagatcactaatcctgctgtcaa |
4115785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 333
Target Start/End: Original strand, 10183744 - 10183904
Alignment:
| Q |
173 |
actcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctg |
272 |
Q |
| |
|
|||||| | ||||| || |||||||||||||||||||||||| ||| || ||||||||||| | || || |||||||| |||| |||||||| |
|
|
| T |
10183744 |
actcttgaggttgtactagatgatgcagaggagaagcagatcctcaaacccagaatcaaacaatggttggatcggttaaaagatgcaatctatgatgctg |
10183843 |
T |
|
| Q |
273 |
aggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaatacacaagc |
333 |
Q |
| |
|
|||| ||| ||||| ||||||| || || |||| ||||||||| ||||||| | |||||| |
|
|
| T |
10183844 |
aggatttgttcaatcaaatcagctacaatgccctacgatgcaagatggagaagaaacaagc |
10183904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 4061378 - 4061301
Alignment:
| Q |
163 |
aacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggct |
240 |
Q |
| |
|
||||||||| | ||| |||| ||| || ||||||| |||||||||||||||| ||| ||||||||||| ||||||| |
|
|
| T |
4061378 |
aacactgctgagtctgcaagctgtacttcatgatgctgaggagaagcagatcaccaaccctgctgtcaagaaatggct |
4061301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 4129233 - 4129298
Alignment:
| Q |
175 |
tcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggct |
240 |
Q |
| |
|
|||||||| ||| || ||||||| |||||||| ||||||| ||| ||||||||||| |||||||| |
|
|
| T |
4129233 |
tcttcaagctgtacttcatgatgctgaggagaaacagatcaccaaccctgctgtcaagcaatggct |
4129298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 4140922 - 4140999
Alignment:
| Q |
163 |
aacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggct |
240 |
Q |
| |
|
||||||||| | |||||||| ||| || ||||||| |||||||| || |||| |||||||||||| ||| ||||||| |
|
|
| T |
4140922 |
aacactgctgagtcttcaagctgtacttcatgatgctgaggagaaacaaatcaccaatcctgctgttaaagaatggct |
4140999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 357; Significance: 0; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 25 - 533
Target Start/End: Original strand, 26906266 - 26906774
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
|||||||||| ||| ||| |||| |||||||||||||||| ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
26906266 |
gatggctgcagctatgataggagaagcttttctctctgcaattgttcagactttagttgagaaacttgtttcaacacagtttcttgattacatcaaaaac |
26906365 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26906366 |
accaagctcaatgtctcactcttgaggcagctaaaaacaacactgctcactctgcaggttgtgctggatgatgcagaggagaaacagatcaacaatcctg |
26906465 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| |
|
|
| T |
26906466 |
ctgtcaaacaatggcttgatgacttgaaagatgctatctttgatgttgaggacttgctcaacgaaattagttatgattccctgcgatgcaaagtcgagaa |
26906565 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| || |||||||| |||||| |
|
|
| T |
26906566 |
tacacaagctcaaaacaaaactaatcaggtgttgaacttcctttcatctccttttaatagcttctacagagagatcaattctcaaatgaagataatgtgt |
26906665 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaacg |
524 |
Q |
| |
|
|||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| || | |
|
|
| T |
26906666 |
gaaagcctgcaattgtttgcacaacataaagatatccttggtttgcaaactaaaagtgctagagtttctcgtagaacaccttcaagttcagtggtaaatg |
26906765 |
T |
|
| Q |
525 |
gatctgtca |
533 |
Q |
| |
|
|||||||| |
|
|
| T |
26906766 |
aatctgtca |
26906774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 3438617 - 3438480
Alignment:
| Q |
45 |
gaggtgcttttctctctgcaactgttcagacctta----gttgagaaacttgcttcaactgagtttcttgattacatcaaaaacaccaaactcaatgtct |
140 |
Q |
| |
|
|||| |||||||||| ||||| | ||||||||||| |||||||||||||||||| | || |||||||||||||||||||| ||||| | ||| ||| |
|
|
| T |
3438617 |
gaggagcttttctctatgcaatttttcagaccttaattagttgagaaacttgcttcatcggattttcttgattacatcaaaaataccaagttaaatatct |
3438518 |
T |
|
| Q |
141 |
cactcttgaggcagctcaaaacaacactgctcactctt |
178 |
Q |
| |
|
|||| ||||||| | || | |||||||||||||||||| |
|
|
| T |
3438517 |
cacttttgaggccgttcgatacaacactgctcactctt |
3438480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 25 - 533
Target Start/End: Complemental strand, 50505 - 50000
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
|||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
50505 |
gatggctgcagctatgattggaggagcttttctcactgcaactgttcagaccttagttgagaaacttgcttcaacagagtttcttgattacatcaaaaac |
50406 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
|| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
50405 |
actaagctcaatgtctcactcttgaggcagctgaaaacaacacttctcactcttcaagttgtgctggatgatgctgaggagaagcagatcaacaatcctg |
50306 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50305 |
ctgtcaaactatggcttgatgacttgaaagatgctgtctttgatgctgaggacttgctcagcgaaatcagttatgattccctgcgatgcaaggtggagaa |
50206 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
| || ||||||||| |||| | |||||||| ||||||| |||| ||| ||||||| | |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
50205 |
tgcaaaagctcaaagcaaaatttatcaggtgatgaacttcttttcatcttcttttaaaa---actatggagagatcaattcccagatgaagatcatgtgt |
50109 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaacg |
524 |
Q |
| |
|
|||| ||||||| | |||| ||| |||||| | ||| |||||||||||||||| | || ||||| | |||||| ||||||||||| ||||| || | |
|
|
| T |
50108 |
gaaagcctgcaactttttgaaaaaagaaaagatatacttcgtttgcaaactaaaagcacaagggtttcacgtagaacaccttcaagttcagtggtaaatg |
50009 |
T |
|
| Q |
525 |
gatctgtca |
533 |
Q |
| |
|
|||||||| |
|
|
| T |
50008 |
aatctgtca |
50000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 169; Significance: 2e-90; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 170 - 522
Target Start/End: Complemental strand, 44958264 - 44957912
Alignment:
| Q |
170 |
ctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttgatg |
269 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||||||| |||| ||| | | ||||||||||||||||| ||||||||||| || | || ||||||| |
|
|
| T |
44958264 |
ctcactcttcaggttgtgcttgatgatgcagaggagaagcaaatcaccaaccttactgtcaaacaatggcttgatgacttgaaaaatacaatatttgatg |
44958165 |
T |
|
| Q |
270 |
ctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaatacacaagctcaaaataaaactaatcaggtgtggaacttcctttc |
369 |
Q |
| |
|
| ||||| |||||||| |||| || |||||||||||||| ||||| |||||||||||||||| | || |||||||||||||| |||||||||||||| |
|
|
| T |
44958164 |
ccgaggatttgctcaaccaaattagctatgattccctgcgttgcaaagtggagaatacacaagttgccaacaaaactaatcaggtctggaacttcctttc |
44958065 |
T |
|
| Q |
370 |
ttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgtgaaaacctgcaattgtttgcaaatcataaagatgtccttggtttg |
469 |
Q |
| |
|
||||||||||| | ||||||| ||||||||||||| || |||||||| ||||||||| ||||||| | |||||| | ||||||||| | |||||||| |
|
|
| T |
44958064 |
atctccttttaaaaacttctatggagagatcaattctcaaatgaagattatgtgtgaatccctgcaactttttgcacagcataaagatataattggtttg |
44957965 |
T |
|
| Q |
470 |
caaactaaaagtgctagagtttctcatagaactccttcaagttctgtggttaa |
522 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| | |||||| |
|
|
| T |
44957964 |
gaaactaaaagtgctagagtttctcatagaacaccttcaagttcaggggttaa |
44957912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 44958378 - 44958256
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
|||||||||||||| ||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
44958378 |
gatggctgcaactatgataggaggagcttttctatctgcaactgttcaaaccttagttgagaaacttgcttcaacagagtttcttgattacatcaaaaac |
44958279 |
T |
|
| Q |
125 |
accaaactcaatgtctcactctt |
147 |
Q |
| |
|
||||| |||||||||||||||| |
|
|
| T |
44958278 |
accaagatcaatgtctcactctt |
44958256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 159 - 324
Target Start/End: Original strand, 11484520 - 11484685
Alignment:
| Q |
159 |
aaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgc |
258 |
Q |
| |
|
|||||||||| || ||||| | |||||||| ||||||||||| |||||||||||| | || |||||||||||||| || ||||||||||| |
|
|
| T |
11484520 |
aaacaacactacttgctcttgaggttgtgcttgatgatgcagaagagaagcagatccttcaacccaaaatcaaacaatggcttgatcggttgaaagatgc |
11484619 |
T |
|
| Q |
259 |
tatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||| |||||| || ||||||||||||| ||||| |
|
|
| T |
11484620 |
aatctttgatgctgaggatttgcttaatgaaatcagctatgatgccttgcgatgcaaggtagagaa |
11484685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 11484386 - 11484490
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
|||||||||| || |||||||||||| ||||| ||||| | ||||| ||| || | || ||||| ||||||||||||||| |||||| |||| ||| |
|
|
| T |
11484386 |
gatggctgcagctttgattggaggtgcatttctgtctgcttcagttcaaaccctaatggacaaactaacttcaactgagtttcgtgattatatcacaaaa |
11484485 |
T |
|
| Q |
125 |
accaa |
129 |
Q |
| |
|
||||| |
|
|
| T |
11484486 |
accaa |
11484490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 125; Significance: 4e-64; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 25 - 513
Target Start/End: Complemental strand, 146639 - 146151
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
||||||||||||| | | ||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||| ||||||||||| |||| |
|
|
| T |
146639 |
gatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgcgaaacttgcttcacaagagttttgtgattacatcagaaac |
146540 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
||||| || ||| |||||| ||| || | |||||||||||||| ||||||| || ||||||||||||||||| |||||| |||| ||| ||| |
|
|
| T |
146539 |
accaagctgaattcctcactgttggcagagttggaaacaacactgctcgctcttcaggtggtgctggatgatgcagaactgaagcaaatcaccaacactg |
146440 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
|||||||||||||| | || | |||||||||| |||| |||||||||||| ||||| || |||||| ||| || ||||||||||| | ||||||||| |
|
|
| T |
146439 |
ctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctgcgatgtacggtggagaa |
146340 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
| ||||||| |||| | ||||||||||| |||||| || |||| ||||||||||| | ||||| ||||||||||||| || |||||||| |||||| |
|
|
| T |
146339 |
gaaacaagctgaaaacatgactaatcaggtttggaacctcttttcatctccttttaaaaatctctatggagagatcaattcacaaatgaagattatgtgt |
146240 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttc |
513 |
Q |
| |
|
||| |||||| | |||||| | || | |||| ||||||| ||||||||| || | |||||||||| ||||| ||||||||||| |
|
|
| T |
146239 |
caaaggctgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtttctctaagaacgccttcaagttc |
146151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 25 - 513
Target Start/End: Complemental strand, 136588 - 136100
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaactgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaac |
124 |
Q |
| |
|
||||||||||||| | | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||| |||| |
|
|
| T |
136588 |
gatggctgcaactttggtgggaggggcttttctctctgctactgttcagactttagttgagaaacttgcttcacaagagttttgtgattacatcagaaac |
136489 |
T |
|
| Q |
125 |
accaaactcaatgtctcactcttgaggcagctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctg |
224 |
Q |
| |
|
||||| || ||| |||||| ||| || | |||||||||||||| ||||||| | || || ||||||||||| ||||||| |||| ||| ||| |
|
|
| T |
136488 |
accaagctgaattcctcactgttggcagagttggaaacaacactgctcgctcttcaggcggttcttgatgatgcagaacagaagcaaatcaccaacactg |
136389 |
T |
|
| Q |
225 |
ctgtcaaacaatggcttaatgacttgaaagatgctatctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggagaa |
324 |
Q |
| |
|
|||||||||||||| | || | |||||||||| |||| |||||||||||| ||||| || |||||| ||| || ||||| ||||| ||||||||||| |
|
|
| T |
136388 |
ctgtcaaacaatggatggatcaactgaaagatgcaatctatgatgctgaggatttgcttaaccaaatcaattacgactccctccgatgtaaggtggagaa |
136289 |
T |
|
| Q |
325 |
tacacaagctcaaaataaaactaatcaggtgtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgt |
424 |
Q |
| |
|
| |||| || |||| | ||||||||||| |||||| || |||| | ||||||||| | ||||| ||||||||||||| || |||||||| |||||| |
|
|
| T |
136288 |
gatacaatctgaaaacatgactaatcaggtttggaacctcttttcatgtccttttaaaaatctctatggagagatcaattcacaaatgaagattatgtgt |
136189 |
T |
|
| Q |
425 |
gaaaacctgcaattgtttgcaaatcataaagatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttc |
513 |
Q |
| |
|
||| |||||| | |||||| | || | |||| ||||||| ||||||||| || | |||||||||| ||||| ||||||||||| |
|
|
| T |
136188 |
caaaggctgcaactttttgcacaacagagagatatccttggcttgcaaactgtgagcgggagagtttctctaagaacgccttcaagttc |
136100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 161 - 513
Target Start/End: Complemental strand, 31680303 - 31679945
Alignment:
| Q |
161 |
acaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgcta |
260 |
Q |
| |
|
|||||||| ||||||||||| | ||| || |||||||| ||| |||||||||||||||||| | ||||||||||||||||| |||| ||||||||||| | |
|
|
| T |
31680303 |
acaacacttctcactcttcatgctgttcttgatgatgctgagaagaagcagatcaacaatcttcctgtcaaacaatggcttgatgagttgaaagatgcaa |
31680204 |
T |
|
| Q |
261 |
tctttgatgctgaggacttgctcaatgaaatcagttatgattccctgcgatgcaaggtggag------aatacacaagctcaaaataaaactaatcaggt |
354 |
Q |
| |
|
| | |||||||||||| |||||||| | ||||||||||||| ||| || ||||||||||| |||||||||||| |||| | ||| |||||| |
|
|
| T |
31680203 |
tatatgatgctgaggatttgctcaaccagatcagttatgattgccttagaagcaaggtggagaatagtaatacacaagctgaaaacatcactggtcaggt |
31680104 |
T |
|
| Q |
355 |
gtggaacttcctttcttctccttttaatagcttctatagagagatcaattcccagatgaagatcatgtgtgaaaacctgcaattgtttgcaaatcataaa |
454 |
Q |
| |
|
||||| |||||||| ||||||||| | | ||| ||| |||||||||||||||| ||||||| ||| ||||| || ||| | |||||| | || ||| |
|
|
| T |
31680103 |
ttggaatttcctttcatctccttttcaaaacttgtatggagagatcaattcccaaatgaagagtatgattgaaaggctccaactttttgcacaacaaaaa |
31680004 |
T |
|
| Q |
455 |
gatgtccttggtttgcaaactaaaagtgctagagtttctcatagaactccttcaagttc |
513 |
Q |
| |
|
||| ||||||| ||||||||| ||||| ||| |||| || |||||| ||||||||||| |
|
|
| T |
31680003 |
gatatccttgggttgcaaactgtaagtggtagggtttttcttagaacaccttcaagttc |
31679945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 17853471 - 17853378
Alignment:
| Q |
174 |
ctcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgctatctttga |
267 |
Q |
| |
|
||||||||| |||||||| ||||||||| |||| || ||||| ||| | ||||||||||||||||| |||| |||||||| ||||||||||| |
|
|
| T |
17853471 |
ctcttcaagctgtgctggttgatgcagaacagaaacaattcaacgatcttcctgtcaaacaatggcttgatgatttgaaagacgctatctttga |
17853378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 19956986 - 19957085
Alignment:
| Q |
25 |
gatggctgcaactacgattggaggtgcttttctctctgcaac-tgttcagaccttagttgagaaacttgcttcaactgagtttcttgattacatcaaaaa |
123 |
Q |
| |
|
||||| |||||||| ||| ||||| ||||||||||| ||||| | |||| ||||||||||||||||||||||| || || ||| || ||||||| ||||| |
|
|
| T |
19956986 |
gatggttgcaactatgataggaggagcttttctctcagcaacctattcaaaccttagttgagaaacttgcttccacggaatttttttattacataaaaaa |
19957085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 304
Target Start/End: Original strand, 29836176 - 29836321
Alignment:
| Q |
159 |
aaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggcttaatgacttgaaagatgc |
258 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||| | |||||||||| |||||||||| | |||| |||||| | ||||||||||||| || |||||||| |
|
|
| T |
29836176 |
aaacaacacttctcactcttgaagcggtgctagttgatgcagagaggaagcagatccatgatccggctgtccgagaatggcttaatgatttaaaagatgc |
29836275 |
T |
|
| Q |
259 |
tatctttgatgctgaggacttgctcaatgaaatcagttatgattcc |
304 |
Q |
| |
|
|||| |||| | ||||| ||||| || |||| ||||| |||||| |
|
|
| T |
29836276 |
aatctatgatacagaggatttgctgaaccaaattagttacgattcc |
29836321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 14006026 - 14005939
Alignment:
| Q |
153 |
agctcaaaacaacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggct |
240 |
Q |
| |
|
|||| |||| ||||||| | | |||||||| |||| || ||||||| ||||||||||| |||| ||| |||||||||||| ||||||| |
|
|
| T |
14006026 |
agctgaaaataacactgttaagtcttcaagctgtgttgaatgatgctgaggagaagcaaatcaccaaccctgctgtcaaagaatggct |
14005939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 13932648 - 13932725
Alignment:
| Q |
163 |
aacactgctcactcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggct |
240 |
Q |
| |
|
||||||||| | ||| |||| ||| || ||||||| |||||||||||||||| ||| |||||||| || |||||||| |
|
|
| T |
13932648 |
aacactgctgagtctacaagctgtacttcatgatgctgaggagaagcagatcaccaaccctgctgttaagcaatggct |
13932725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0267 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0267
Description:
Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 17960 - 18025
Alignment:
| Q |
175 |
tcttcaagttgtgctggatgatgcagaggagaagcagatcaacaatcctgctgtcaaacaatggct |
240 |
Q |
| |
|
|||||||| ||| ||| ||||||| || ||||| || |||| ||||||||||||||| |||||||| |
|
|
| T |
17960 |
tcttcaagctgtactgaatgatgctgaagagaaacaaatcaccaatcctgctgtcaagcaatggct |
18025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University