View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10271_low_67 (Length: 296)
Name: NF10271_low_67
Description: NF10271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10271_low_67 |
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Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 35669245 - 35669522
Alignment:
| Q |
1 |
tggggccaaagttaaaagcaccaaaagaagtcaaagcagctaagaaaaatgaggttagacaaactccacatagaaatccaacagcacaaatttgacaaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35669245 |
tggggccaaagttaaaagcaccaaaagaagtcaaagcagctaagaaaaatgaggttagacaaactccacatagaaatccaacagcacaaatttgacaaga |
35669344 |
T |
|
| Q |
101 |
aaatgaactactcatttgcaatgttctttgtgaaaccactctctcaatagatttctgattctttgcttccatttcactctcttttttcaacaattcgtaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
35669345 |
aaatgaactactcatttgcaatgttctttgtgaaaccactctctcaatagatttctgattctttgcttccatttcactctcttttttcaacaattcttaa |
35669444 |
T |
|
| Q |
201 |
ttcaaactaataaaaccttctccaatgattaacaaacctcaaaaaccacactattatgttgaccatccatgtaactgt |
278 |
Q |
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||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
35669445 |
ttcaaactaataaaatcttctccaatgattaacaaacctcataaaccacactattatgttgaccatccatgtaactgt |
35669522 |
T |
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