View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10271_low_73 (Length: 284)
Name: NF10271_low_73
Description: NF10271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10271_low_73 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 13 - 284
Target Start/End: Complemental strand, 47036376 - 47036105
Alignment:
| Q |
13 |
agcaaaggacatgtcccaaatagtttgagtaatatgaaagtagaagacttaatagatagtaatgagcaatggaatttatctctattaaataaatagccac |
112 |
Q |
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| T |
47036376 |
agcaaaggacatgtcccaaatagtttgagtaatatgaaagtagaagacttaatagatagtaatgagcaatggaatttatctctattaaataaatagccac |
47036277 |
T |
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| Q |
113 |
ttgttagatgatatagtccttgacataaggagcctagtgcaatctgatatcaatttaagagctgatttgtgtgttaccctgggatattgtcgctaccact |
212 |
Q |
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| T |
47036276 |
ttgttagatgatatagtccttgacataaggagcctagtgcaatctgatatcaatttaggagctgatttgtgtgttaccctgggatattgtcgctaccact |
47036177 |
T |
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| Q |
213 |
tacaagttacaagtccctttgcaggtttaataacatggaggctaatagcttttggtccaatgtttggagaat |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47036176 |
tacaagttacaagtccctttgcaggtttaataacatggaggctaatagcttttggtccaatgtttggagaat |
47036105 |
T |
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