View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10271_low_85 (Length: 264)
Name: NF10271_low_85
Description: NF10271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10271_low_85 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 15714523 - 15714290
Alignment:
| Q |
19 |
accctagtaaatgaccaacctgatgcatcacagcagattccaaatccacatcatcctcttcaacaacattttcactaggtaacacccattgttcatctgc |
118 |
Q |
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| T |
15714523 |
acccaagtaaatgaccaacttgatgcatcacaacagattccaaatccacatcatcctcttcaacaacattttcactaggtaacacccattgttcatctgc |
15714424 |
T |
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| Q |
119 |
atccaaatatacactgccaacataaacactactgtttatataactgcctccaaccgttccaccttttccatccaacgttaaaaacgctatacgaatatct |
218 |
Q |
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||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15714423 |
atccaaatatacacttccaacattaacactactgtttatataactgcctccaactgttccaccttttccatccaacgttaaaaacgctatacgaatatct |
15714324 |
T |
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| Q |
219 |
gaatcattaaacgacgttgtctcaatgaagttca |
252 |
Q |
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||||||||||||||| |||||||||||||||||| |
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| T |
15714323 |
gaatcattaaacgacattgtctcaatgaagttca |
15714290 |
T |
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